MD13G1237200.v1.1

Ribosomal RNA processing protein 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0012270
Physical Location & Seq
Forward (+)
24135949 .. 24137697
1749 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1237200.v1.1.491

Sequence Viewer

Length: 1671 bp
ATGGAGGCAGACACGGCGGTGGAAGCAGGCCTCTCCCTGATAAAGCAACTGGCTTCGTGCGATAAAAGCAGCCGAGACAGAGCCCTCAGGGTCCTGCTCAAAACATGGCTGCCGGCGCAACTCAACGTCCAAGACGACCACATGAGGAAGCTCTGGAAAGGCCTTTTCTACTGCCTGTGGCACTCCGACAAGGTCCCGGTCCAAACCCAGCTCATCGATCGGCTCTCCGCTCTGGTCCTCAGCCTCCACCTCCCGCTCTCCCTCCACTACTTCTCGGTGTTCTTGCTCACCATGCGCCGCGAGTGGCCCGGCATCGACGCCCTGAGGTTAGACAAGTTCTACTTATCGATTCGCAGATTTATGACTAGTTTCTTTACTTTGATGAGAAATAATTTGTGGGATTTGGAGCTTGTGAAACGTCTGATGGGTGTGTTGGAGGAGAGGACTTTTTTTGCGGATGATAAGTGTTTGGGGAATGGGGTTAATTACCACATTGCCTCTGTTTTTCTAGAAGAGCTTAGGCCGTTTCTTCCGCTTAAGGCTGATGTTCTTGAGGTTCTGTTAGTGGGTTTTATTCGGGTTTCAGCTCAAGTGCCCGATAAGGTGTTGTTGGGGAAGATTAAGAGTAATATGTTCGATGTGCTGCTCGGGGCGGGGAAGAGGCTGTTGGAGGTTAAGAAGTCGGGGGAGGATGTAGATTTGGGTGATGAGGTTGTTGTCTTCGGGACAATTGTGCTGAAAATGGGGTTTGCGGGCAAGTTTTATGAATCAGGGTCTTCACCTGAGTGCTGCCAGGGTAATAGGAAAGTGTTGTTTGGCTTGCACGAGGGGTTTATGAAGTTGGAGAAAGAGTTGGAATCTTCTGGGATTGAGATGTCATTTCCTGATGTTGTTTATCAGGACGATGAGGAAGTGCCGAATTTGGTTCCCCTTGATAGTGAGGAGATGGACGTAAGTAAATCAGAGCCTGCTGATGTTGTCATGGCCAATGGGTCTGCTGGAAAGCGTTTGAAGAAGTGCAAGAAGAATGAGAAGGGCACTGGTGGTGCTGATACAAAGGCAGAGAAGAAAAAGAAGAAGAAAAAGAAGAGTAAGGAGAATGGGAGTTTTGATTCAGACTCTGAAAAGAGCTCTACAGACAGGGAGAATGAGAACGGAGCTACAAATGGTGAGAATTCAGATGATCATCAGGTCACTGATGCCGATGCTTTTAAACTTGAGGATAATGTGATATCGAACCTGCAGATGCAGTTTGAGAAGATTGCTGCTGAAGCCGGCTTGGATGACGATGTTCCAAGCGCCTGTGATTTGCCTACAGTTTCAGATAAGGGCCCTATCTCTAAGAAGAGAAAGAGAATGAAGAAATCTGTTGAAAAAGAAGCCGAGGGTGGCACCAATGCAAAGAGTGGAGAGAAGAGTGCAAAGAAGGTAAAGTTTTCCATGAAAAACAATTTGGTGTGGAAGCCCCAGAGCCCTTTACCTCCGCAAGATTTAAGACTGCCTCCTTCTGCTACGCCTAGAGGAAGTGCACTCAAGAAAGGAGTACCTCCAGGTCCGATTAGGGAAATGCCTTCGCCTACTAAGAAGGTGAAAATGGTAAGAGTTGTTGCTGTCAAGAAGGCACGGAAGGCTGTCAAACGTATAAAGAAGTTGAAATCTCGTCCTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000791 GO:0000792 GO:0001652 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010563 GO:0010604 GO:0010628 GO:0010921 GO:0010923 GO:0010941 GO:0010942 GO:0016070 GO:0016072 GO:0019219 GO:0019220 GO:0019222 GO:0022613 GO:0030684 GO:0030687 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0034260 GO:0034470 GO:0034641 GO:0034660 GO:0035303 GO:0035305 GO:0035821 GO:0042254 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043086 GO:0043087 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043900 GO:0043902 GO:0043903 GO:0043921 GO:0043923 GO:0044085 GO:0044092 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045936 GO:0045944 GO:0046483 GO:0046782 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048524 GO:0050434 GO:0050789 GO:0050790 GO:0050792 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051252 GO:0051254 GO:0051336 GO:0051346 GO:0051702 GO:0051704 GO:0051707 GO:0051817 GO:0051851 GO:0052312 GO:0052472 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098586 GO:0140110 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nop52

Protein Analysis

557

Amino Acids

62.05

Weight (kDa)

9.27

Isoelectric Point (pI)

39.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop52 PF05997 11 - 227 9.2e-63 Nucleolar protein,Nop52
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1248
AccB1I GGYRCC 1 cut(s) 1391
AccBSI CCGCTC 2 cut(s) 230, 256
AccII CGCG 1 cut(s) 300
AciI CCGC 9 cut(s) 17, 228, 254, 298, 455, 533, 653, 752, 1484
AcoI YGGCCR 1 cut(s) 984
AcsI RAATTY 2 cut(s) 919, 1174
AcuI CTGAAG 1 cut(s) 1290
AcyI GRCGYC 1 cut(s) 318
AfaI GTAC 1 cut(s) 1545
AflII CTTAAG 1 cut(s) 536
AgsI TTSAA 3 cut(s) 1012, 1373, 1654
AhlI ACTAGT 1 cut(s) 365
AjnI CCWGG 2 cut(s) 792, 1549
AjuI GAANNNNNNNTTGG 4 cut(s) 650, 682, 1436, 1468
AleI CACNNNNGTG 2 cut(s) 17, 784
AluBI AGCT 7 cut(s) 151, 211, 409, 517, 587, 1131, 1160
AluI AGCT 7 cut(s) 151, 211, 409, 517, 587, 1131, 1160
Alw21I GWGCWC 2 cut(s) 1133, 1531
Alw26I GTCTC 1 cut(s) 69
Alw44I GTGCAC 1 cut(s) 1527
AlwNI CAGNNNCTG 2 cut(s) 968, 1121
Ama87I CYCGRG 1 cut(s) 647
AoxI GGCC 6 cut(s) 28, 160, 305, 521, 984, 1330
ApaI GGGCCC 1 cut(s) 1334
ApaLI GTGCAC 1 cut(s) 1527
ApeKI GCWGC 5 cut(s) 69, 109, 643, 789, 1265
ApoI RAATTY 2 cut(s) 919, 1174
AspLEI GCGC 3 cut(s) 118, 297, 1301
AspS9I GGNCC 8 cut(s) 91, 193, 199, 235, 306, 1330, 1331, 1553
AsuC2I CCSGG 2 cut(s) 197, 309
AsuHPI GGTGA 5 cut(s) 280, 716, 771, 1181, 1600
AvaI CYCGRG 1 cut(s) 647
AvaII GGWCC 5 cut(s) 91, 193, 199, 235, 1553
AxyI CCTNAGG 2 cut(s) 86, 323
BaeGI GKGCMC 4 cut(s) 597, 1040, 1334, 1531
BalI TGGCCA 1 cut(s) 986
BanI GGYRCC 1 cut(s) 1391
BanII GRGCYC 4 cut(s) 85, 1133, 1334, 1475
BauI CACGAG 1 cut(s) 824
BbsI GAAGAC 2 cut(s) 712, 768
Bbv12I GWGCWC 2 cut(s) 1133, 1531
BbvCI CCTCAGC 1 cut(s) 239
BbvI GCAGC 5 cut(s) 81, 96, 630, 776, 1252
BccI CCATC 2 cut(s) 418, 940
BceAI ACGGC 2 cut(s) 30, 508
BciT130I CCWGG 2 cut(s) 794, 1551
BclI TGATCA 1 cut(s) 1183
BcnI CCSGG 2 cut(s) 197, 309
BcoDI GTCTC 1 cut(s) 69
BcuI ACTAGT 1 cut(s) 365
BfaI CTAG 3 cut(s) 366, 509, 1518
BfmI CTRYAG 3 cut(s) 1134, 1241, 1314
BfoI RGCGCY 1 cut(s) 1302
BfrI CTTAAG 1 cut(s) 536
BfuAI ACCTGC 1 cut(s) 1248
BisI GCNGC 6 cut(s) 70, 110, 298, 644, 790, 1266
BlsI GCNGC 6 cut(s) 71, 111, 299, 645, 791, 1267
Bme1390I CCNGG 4 cut(s) 197, 309, 794, 1551
Bme18I GGWCC 5 cut(s) 91, 193, 199, 235, 1553
BmeT110I CYCGRG 1 cut(s) 647
BmgT120I GGNCC 8 cut(s) 91, 193, 199, 235, 306, 1330, 1331, 1553
BmiI GGNNCC 5 cut(s) 92, 195, 927, 1332, 1393
BmrFI CCNGG 4 cut(s) 197, 309, 794, 1551
BmsI GCATC 4 cut(s) 321, 1189, 1195, 1236
BpiI GAAGAC 2 cut(s) 712, 768
BpmI CTGGAG 1 cut(s) 1533
Bpu10I CCTNAGC 2 cut(s) 239, 518
BpuEI CTTGAG 4 cut(s) 572, 573, 1238, 1517
BpuMI CCSGG 2 cut(s) 197, 309
Bsa29I ATCGAT 2 cut(s) 216, 347
BsaBI GATNNNNATC 1 cut(s) 1185
BsaHI GRCGYC 1 cut(s) 318
BsaJI CCNNGG 2 cut(s) 793, 1383
BsaXI ACNNNNNCTCC 2 cut(s) 836, 866
Bse118I RCCGGY 2 cut(s) 112, 1274
Bse1I ACTGG 2 cut(s) 54, 1045
Bse21I CCTNAGG 2 cut(s) 86, 323
Bse3DI GCAATG 1 cut(s) 492
Bse8I GATNNNNATC 1 cut(s) 1185
BseBI CCWGG 2 cut(s) 794, 1551
BseCI ATCGAT 2 cut(s) 216, 347
BseDI CCNNGG 2 cut(s) 793, 1383
BseGI GGATG 3 cut(s) 463, 697, 1288
BseJI GATNNNNATC 1 cut(s) 1185
BseMI GCAATG 1 cut(s) 492
BseMII CTCAG 4 cut(s) 100, 253, 314, 774
BseNI ACTGG 2 cut(s) 54, 1045
BseRI GAGGAG 2 cut(s) 452, 956
BseSI GKGCMC 4 cut(s) 597, 1040, 1334, 1531
BseXI GCAGC 5 cut(s) 81, 96, 630, 776, 1252
BseYI CCCAGC 1 cut(s) 207
Bsh1236I CGCG 1 cut(s) 300
Bsh1285I CGRYCG 1 cut(s) 220
BshFI GGCC 6 cut(s) 30, 162, 307, 523, 986, 1332
BshNI GGYRCC 1 cut(s) 1391
BshVI ATCGAT 2 cut(s) 216, 347
BsiEI CGRYCG 1 cut(s) 220
BsiHKAI GWGCWC 2 cut(s) 1133, 1531
BsiHKCI CYCGRG 1 cut(s) 647
BsiSI CCGG 4 cut(s) 113, 197, 309, 1275
BslFI GGGAC 2 cut(s) 179, 739
BsmAI GTCTC 1 cut(s) 69
BsmFI GGGAC 2 cut(s) 179, 739
BsnI GGCC 6 cut(s) 30, 162, 307, 523, 986, 1332
BsoBI CYCGRG 1 cut(s) 647
Bsp120I GGGCCC 1 cut(s) 1330
Bsp1286I GDGCHC 7 cut(s) 85, 597, 1040, 1133, 1334, 1475, 1531
Bsp143I GATC 2 cut(s) 217, 1183
BspACI CCGC 9 cut(s) 17, 228, 254, 298, 455, 533, 653, 752, 1484
BspANI GGCC 6 cut(s) 30, 162, 307, 523, 986, 1332
BspCNI CTCAG 4 cut(s) 99, 252, 315, 775
BspDI ATCGAT 2 cut(s) 216, 347
BspFNI CGCG 1 cut(s) 300
BspLI GGNNCC 5 cut(s) 92, 195, 927, 1332, 1393
BspMAI CTGCAG 1 cut(s) 1245
BspMI ACCTGC 1 cut(s) 1248
BspQI GCTCTTC 1 cut(s) 507
BspT107I GGYRCC 1 cut(s) 1391
BspTI CTTAAG 1 cut(s) 536
BsrBI CCGCTC 2 cut(s) 230, 256
BsrDI GCAATG 1 cut(s) 492
BsrFI RCCGGY 2 cut(s) 112, 1274
BsrI ACTGG 2 cut(s) 54, 1045
BssAI RCCGGY 2 cut(s) 112, 1274
BssECI CCNNGG 2 cut(s) 793, 1383
BssMI GATC 2 cut(s) 217, 1183
BssNI GRCGYC 1 cut(s) 318
BssSI CACGAG 1 cut(s) 824
Bst2BI CACGAG 1 cut(s) 824
Bst2UI CCWGG 2 cut(s) 794, 1551
Bst4CI ACNGT 1 cut(s) 1318
Bst6I CTCTTC 5 cut(s) 507, 653, 1082, 1340, 1409
BstACI GRCGYC 1 cut(s) 318
BstAFI CTTAAG 1 cut(s) 536
BstC8I GCNNGC 6 cut(s) 28, 114, 754, 821, 969, 1276
BstDEI CTNAG 8 cut(s) 86, 239, 323, 518, 783, 1341, 1581, 1668
BstF5I GGATG 3 cut(s) 463, 697, 1288
BstFNI CGCG 1 cut(s) 300
BstH2I RGCGCY 1 cut(s) 1302
BstHHI GCGC 3 cut(s) 118, 297, 1301
BstKTI GATC 2 cut(s) 220, 1186
BstMAI GTCTC 1 cut(s) 69
BstMBI GATC 2 cut(s) 217, 1183
BstMCI CGRYCG 1 cut(s) 220
BstMWI GCNNNNNNNGC 7 cut(s) 14, 23, 66, 115, 292, 1271, 1628
BstNI CCWGG 2 cut(s) 794, 1551
BstSCI CCNGG 4 cut(s) 195, 307, 792, 1549
BstSFI CTRYAG 3 cut(s) 1134, 1241, 1314
BstSLI GKGCMC 4 cut(s) 597, 1040, 1334, 1531
BstUI CGCG 1 cut(s) 300
BstV1I GCAGC 5 cut(s) 81, 96, 630, 776, 1252
BstV2I GAAGAC 2 cut(s) 712, 768
Bsu15I ATCGAT 2 cut(s) 216, 347
Bsu36I CCTNAGG 2 cut(s) 86, 323
BsuRI GGCC 6 cut(s) 30, 162, 307, 523, 986, 1332
BsuTUI ATCGAT 2 cut(s) 216, 347
BtsCI GGATG 3 cut(s) 463, 697, 1288
BtsIMutI CAGTG 2 cut(s) 1038, 1194
BveI ACCTGC 1 cut(s) 1248
Cac8I GCNNGC 6 cut(s) 28, 114, 754, 821, 969, 1276
CaiI CAGNNNCTG 2 cut(s) 968, 1121
CfoI GCGC 3 cut(s) 118, 297, 1301
Cfr10I RCCGGY 2 cut(s) 112, 1274
Cfr13I GGNCC 8 cut(s) 91, 193, 199, 235, 306, 1330, 1331, 1553
ClaI ATCGAT 2 cut(s) 216, 347
CseI GACGC 1 cut(s) 326
Csp6I GTAC 1 cut(s) 1544
CviAII CATG 5 cut(s) 105, 142, 292, 982, 1441
CviQI GTAC 1 cut(s) 1544
DdeI CTNAG 8 cut(s) 86, 239, 323, 518, 783, 1341, 1581, 1668
DpnI GATC 2 cut(s) 219, 1185
DpnII GATC 2 cut(s) 217, 1183
DraI TTTAAA 1 cut(s) 1213
EaeI YGGCCR 1 cut(s) 984
Eam1104I CTCTTC 5 cut(s) 507, 653, 1082, 1340, 1409
EarI CTCTTC 5 cut(s) 507, 653, 1082, 1340, 1409
Ecl136II GAGCTC 1 cut(s) 1131
Eco147I AGGCCT 2 cut(s) 30, 162
Eco24I GRGCYC 4 cut(s) 85, 1133, 1334, 1475
Eco32I GATATC 1 cut(s) 1233
Eco47I GGWCC 5 cut(s) 91, 193, 199, 235, 1553
Eco53kI GAGCTC 1 cut(s) 1131
Eco57I CTGAAG 1 cut(s) 1290
Eco81I CCTNAGG 2 cut(s) 86, 323
Eco88I CYCGRG 1 cut(s) 647
EcoICRI GAGCTC 1 cut(s) 1131
EcoO109I RGGNCCY 4 cut(s) 91, 193, 1330, 1331
EcoRI GAATTC 1 cut(s) 1174
EcoRII CCWGG 2 cut(s) 792, 1549
EcoRV GATATC 1 cut(s) 1233
EcoT38I GRGCYC 4 cut(s) 85, 1133, 1334, 1475
FaeI CATG 5 cut(s) 108, 145, 295, 985, 1444
FalI AAGNNNNNCTT 2 cut(s) 326, 358
FaqI GGGAC 2 cut(s) 179, 739
FatI CATG 5 cut(s) 104, 141, 291, 981, 1440
FauI CCCGC 3 cut(s) 261, 646, 745
FbaI TGATCA 1 cut(s) 1183
Fnu4HI GCNGC 6 cut(s) 70, 110, 298, 644, 790, 1266
FokI GGATG 3 cut(s) 470, 704, 1295
FriOI GRGCYC 4 cut(s) 85, 1133, 1334, 1475
Fsp4HI GCNGC 6 cut(s) 70, 110, 298, 644, 790, 1266
FspBI CTAG 3 cut(s) 366, 509, 1518
GlaI GCGC 3 cut(s) 117, 296, 1300
GluI GCNGC 6 cut(s) 70, 110, 298, 644, 790, 1266
GsaI CCCAGC 1 cut(s) 211
GsuI CTGGAG 1 cut(s) 1533
HaeII RGCGCY 1 cut(s) 1302
HaeIII GGCC 6 cut(s) 30, 162, 307, 523, 986, 1332
HapII CCGG 4 cut(s) 113, 197, 309, 1275
HgaI GACGC 1 cut(s) 326
HhaI GCGC 3 cut(s) 118, 297, 1301
Hin1I GRCGYC 1 cut(s) 318
Hin1II CATG 5 cut(s) 108, 145, 295, 985, 1444
Hin6I GCGC 3 cut(s) 116, 295, 1299
HinP1I GCGC 3 cut(s) 116, 295, 1299
HinfI GANTC 5 cut(s) 349, 767, 857, 1112, 1118
HpaII CCGG 4 cut(s) 113, 197, 309, 1275
HphI GGTGA 5 cut(s) 280, 716, 771, 1181, 1600
Hpy166II GTNNAC 1 cut(s) 1529
Hpy188I TCNGA 8 cut(s) 187, 423, 964, 1117, 1123, 1180, 1324, 1557
Hpy188III TCNNGA 8 cut(s) 154, 509, 551, 724, 884, 899, 1534, 1615
Hpy8I GTNNAC 1 cut(s) 1529
Hpy99I CGWCG 1 cut(s) 320
HpyAV CCTTC 7 cut(s) 1027, 1420, 1515, 1579, 1581, 1612, 1621
HpyCH4III ACNGT 1 cut(s) 1318
HpyCH4IV ACGT 4 cut(s) 126, 418, 951, 1639
HpyCH4V TGCA 7 cut(s) 823, 1020, 1243, 1249, 1400, 1421, 1529
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 23, 66, 115, 292, 1271, 1628
HpyF3I CTNAG 8 cut(s) 86, 239, 323, 518, 783, 1341, 1581, 1668
HpySE526I ACGT 4 cut(s) 126, 418, 951, 1639
Hsp92I GRCGYC 1 cut(s) 318
Hsp92II CATG 5 cut(s) 108, 145, 295, 985, 1444
HspAI GCGC 3 cut(s) 116, 295, 1299
KroI GCCGGC 2 cut(s) 112, 1274
KroNI GCCGGC 2 cut(s) 114, 1276
Ksp22I TGATCA 1 cut(s) 1183
Kzo9I GATC 2 cut(s) 217, 1183
LguI GCTCTTC 1 cut(s) 507
LmnI GCTCC 2 cut(s) 406, 1157
Lsp1109I GCAGC 5 cut(s) 81, 96, 630, 776, 1252
LweI GCATC 4 cut(s) 321, 1189, 1195, 1236
MaeI CTAG 3 cut(s) 366, 509, 1518
MaeII ACGT 4 cut(s) 126, 418, 951, 1639
MaeIII GTNAC 1 cut(s) 1192
MalI GATC 2 cut(s) 219, 1185
MbiI CCGCTC 2 cut(s) 230, 256
MboI GATC 2 cut(s) 217, 1183
MfeI CAATTG 1 cut(s) 729
MhlI GDGCHC 7 cut(s) 85, 597, 1040, 1133, 1334, 1475, 1531
MlsI TGGCCA 1 cut(s) 986
MluCI AATT 6 cut(s) 391, 484, 729, 919, 1174, 1450
MluNI TGGCCA 1 cut(s) 986
MlyI GAGTC 1 cut(s) 1112
MmeI TCCRAC 5 cut(s) 210, 414, 648, 822, 834
Mox20I TGGCCA 1 cut(s) 986
MroNI GCCGGC 2 cut(s) 112, 1274
MscI TGGCCA 1 cut(s) 986
MseI TTAA 6 cut(s) 483, 537, 621, 675, 1212, 1493
MslI CAYNNNNRTG 2 cut(s) 17, 784
Msp20I TGGCCA 1 cut(s) 986
MspCI CTTAAG 1 cut(s) 536
MspI CCGG 4 cut(s) 113, 197, 309, 1275
MspR9I CCNGG 4 cut(s) 197, 309, 794, 1551
MunI CAATTG 1 cut(s) 729
MvaI CCWGG 2 cut(s) 794, 1551
MvnI CGCG 1 cut(s) 300
MwoI GCNNNNNNNGC 7 cut(s) 14, 23, 66, 115, 292, 1271, 1628
NaeI GCCGGC 2 cut(s) 114, 1276
NciI CCSGG 2 cut(s) 197, 309
NdeII GATC 2 cut(s) 217, 1183
NgoMIV GCCGGC 2 cut(s) 112, 1274
NlaIII CATG 5 cut(s) 108, 145, 295, 985, 1444
NlaIV GGNNCC 5 cut(s) 92, 195, 927, 1332, 1393
NmeAIII GCCGAG 2 cut(s) 98, 1408
NmuCI GTSAC 1 cut(s) 1192
OliI CACNNNNGTG 2 cut(s) 17, 784
PceI AGGCCT 2 cut(s) 30, 162
PciSI GCTCTTC 1 cut(s) 507
PcsI WCGNNNNNNNCGW 1 cut(s) 132
PdiI GCCGGC 2 cut(s) 114, 1276
PfeI GAWTC 4 cut(s) 349, 767, 857, 1112
PflFI GACNNNGTC 1 cut(s) 191
PkrI GCNGC 6 cut(s) 71, 111, 299, 645, 791, 1267
Ple19I CGATCG 1 cut(s) 220
PleI GAGTC 1 cut(s) 1112
PpsI GAGTC 1 cut(s) 1112
PpuMI RGGWCCY 2 cut(s) 91, 193
Psp124BI GAGCTC 1 cut(s) 1133
Psp5II RGGWCCY 2 cut(s) 91, 193
Psp6I CCWGG 2 cut(s) 792, 1549
PspFI CCCAGC 1 cut(s) 207
PspGI CCWGG 2 cut(s) 792, 1549
PspN4I GGNNCC 5 cut(s) 92, 195, 927, 1332, 1393
PspOMI GGGCCC 1 cut(s) 1330
PspPI GGNCC 8 cut(s) 91, 193, 199, 235, 306, 1330, 1331, 1553
PspPPI RGGWCCY 2 cut(s) 91, 193
PstI CTGCAG 1 cut(s) 1245
PstNI CAGNNNCTG 2 cut(s) 968, 1121
PsyI GACNNNGTC 1 cut(s) 191
PvuI CGATCG 1 cut(s) 220
RsaI GTAC 1 cut(s) 1545
RsaNI GTAC 1 cut(s) 1544
RseI CAYNNNNRTG 2 cut(s) 17, 784
SacI GAGCTC 1 cut(s) 1133
SapI GCTCTTC 1 cut(s) 507
SaqAI TTAA 6 cut(s) 483, 537, 621, 675, 1212, 1493
SatI GCNGC 6 cut(s) 70, 110, 298, 644, 790, 1266
Sau3AI GATC 2 cut(s) 217, 1183
Sau96I GGNCC 8 cut(s) 91, 193, 199, 235, 306, 1330, 1331, 1553
SchI GAGTC 1 cut(s) 1112
ScrFI CCNGG 4 cut(s) 197, 309, 794, 1551
SduI GDGCHC 7 cut(s) 85, 597, 1040, 1133, 1334, 1475, 1531
SfaNI GCATC 4 cut(s) 321, 1189, 1195, 1236
SfcI CTRYAG 3 cut(s) 1134, 1241, 1314
SinI GGWCC 5 cut(s) 91, 193, 199, 235, 1553
SmiMI CAYNNNNRTG 2 cut(s) 17, 784
SmlI CTYRAG 5 cut(s) 536, 551, 588, 1217, 1532
SmoI CTYRAG 5 cut(s) 536, 551, 588, 1217, 1532
SpeI ACTAGT 1 cut(s) 365
Sse9I AATT 6 cut(s) 391, 484, 729, 919, 1174, 1450
SseBI AGGCCT 2 cut(s) 30, 162
SsiI CCGC 9 cut(s) 17, 228, 254, 298, 455, 533, 653, 752, 1484
SspMI CTAG 3 cut(s) 366, 509, 1518
SstI GAGCTC 1 cut(s) 1133
StuI AGGCCT 2 cut(s) 30, 162
StyD4I CCNGG 4 cut(s) 195, 307, 792, 1549
TaaI ACNGT 1 cut(s) 1318
TaiI ACGT 4 cut(s) 129, 421, 954, 1642
TaqI TCGA 5 cut(s) 216, 315, 347, 636, 1235
TasI AATT 6 cut(s) 391, 484, 729, 919, 1174, 1450
TauI GCSGC 1 cut(s) 300
TfiI GAWTC 4 cut(s) 349, 767, 857, 1112
Tru1I TTAA 6 cut(s) 483, 537, 621, 675, 1212, 1493
Tru9I TTAA 6 cut(s) 483, 537, 621, 675, 1212, 1493
TscAI CASTG 2 cut(s) 1045, 1201
TseFI GTSAC 1 cut(s) 1192
TseI GCWGC 5 cut(s) 69, 109, 643, 789, 1265
Tsp45I GTSAC 1 cut(s) 1192
TspDTI ATGAA 4 cut(s) 780, 851, 1373, 1457
TspGWI ACGGA 2 cut(s) 1170, 1639
TspRI CASTG 2 cut(s) 1045, 1201
Tth111I GACNNNGTC 1 cut(s) 191
Vha464I CTTAAG 1 cut(s) 536
VneI GTGCAC 1 cut(s) 1527
VpaK11BI GGWCC 5 cut(s) 91, 193, 199, 235, 1553
XapI RAATTY 2 cut(s) 919, 1174
XbaI TCTAGA 1 cut(s) 508
XspI CTAG 3 cut(s) 366, 509, 1518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.