pycom13g21010

Ribosomal RNA processing protein 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0012270
Physical Location & Seq
Forward (+)
17236735 .. 17238408
1674 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g21010.1

Sequence Viewer

Length: 1674 bp
ATGGAGGCAGACACGGCGGTGGAAGCAGGCCTCTCCCTGATAAAGCAACTGGCTTCGTGCGATAAAAGCAGCCGAGACAGAGCCCTCAGGGTCCTGCTCAAAACATGGCTGCCGGCGCAACTCAACGTCCAAGACGACCACATGAGGAAGCTCTGGAAAGGCCTTTTCTACTGCCTGTGGCACGCCGACAAGGTCCCGGTCCAAACCCAGCTCATCGATCGGCTCTCCGCTCTGGTCCTCAGCCTCCACCTCCCGCTCTCCCTCCACTACTTCTCGGTGTTCTTGCTCACCATGCGCCGCGAGTGGTCCGGCATCGACGCCCTGAGGTTAGACAAGTTCTACTTATCGATTCGCAGATTTATGACTAGTTTCTTTACTTTGATGAGAAATAATTTGTGGGATTTGGAGCTTGTGAAACGTCTGATGGGTGTGTTGGAGGAGAGGACTTTTTTTGCGGATGATAAGTGTTTGGGGAATGGGGTTAATTACCACATTGCCTCTGTTTTTCTAGAAGAGCTTAGGCCGTTTCTTCCGCTTAAGGCTGATGTTCTTGAGGTTCTGTTAGTGGGTTTTATTCGGGTTTCGGCTCAAGTGTCCGATAAGGTGTTGTTGGGGAAGATTAAGAGTAATATGTTCGATGTGCTGCTCGGGGCGGGGAAGAGGCTGTTGGAGGTTAAGAAGTCGGGGGATGATGTAGAATTGGGTGATGAGGTTGTTGTCTTCGGGACAATTGCGCTGAAAATGGGGTTTGCAAGCAAGTTTTATGAATCAGGGTCTTCACCTGAGTGCTGCCAGGGTAATAGGAAAGTGTTGTTTGGCTTGCACGAGGGGTTTATGAAGTTGGAGAAAGAGTTGGAATCTTCTGGGATTGAGATTTCTTTTCCTGATGTTGTTTATCAGGACGATGAGGAAGTGCCGAATTTGGTTCCCCTTGATAATGAGGAGATGGACGTAAGTAAATCGGAGCCTGCTGATGTTGTCATGGCCAATGGGTCTGCTGGAAAGCGTTTGAAGAAGTGCAAGAAGAATGAGAAGGGCCCTGGTGGTGCTAATACAAAGGCAGAGAAGAAAAAGAAGAAGAAAAAGAAGAATAAGAAGGAGAATGGGAGTTTTGATTCAGACTCTGAAAAGAGCTCTACAGACAGGGAGAATGAGAATGGAGCTACAAATGGTGAGAATTCAGATGATCATCAGGTAACTGATGCCGATGCTTTAAAACTTGAGGATAATGTGATATCGAACCTGCAGATGCAGTTTGAGAAGATTGCTGCTGAAGCCGGCTTGGATGACGACGTTCCAAGCGCCTGTGATTTGCCTACAGTTTCAGATAAGGGTCCTATCTCTAAGAAGAGAAAGAGAATGAAGAAATCTGTTGAAGAAGAAGCCGAGGGTGGCACCAATGCAAAGAGTGGAGAGAAGAGTGCAAAGAAGGTAAAGTTTTCCATGAAAAACAATTTGGTGTGGAAGCCCCAGAGCCCTTTACCTCCGCAAGATTTAAGACTGCCTCCTTCTGCTACGCCTAGAGGAAGTGCACTCAAGAAAGGAGTACCTCCAGGTCCGATTAGGGAAATGCCTTCGCCTACTAAGAAGGTGAAAATGGTAAGAGTTGTTGCTGTCAAGAAGGCACGGAAGGCTGTCAAACGTATAAAGAAGTTGAAATCTCGTCCTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000791 GO:0000792 GO:0001652 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010563 GO:0010604 GO:0010628 GO:0010921 GO:0010923 GO:0010941 GO:0010942 GO:0016070 GO:0016072 GO:0019219 GO:0019220 GO:0019222 GO:0022613 GO:0030684 GO:0030687 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0034260 GO:0034470 GO:0034641 GO:0034660 GO:0035303 GO:0035305 GO:0035821 GO:0042254 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043086 GO:0043087 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043900 GO:0043902 GO:0043903 GO:0043921 GO:0043923 GO:0044085 GO:0044092 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045936 GO:0045944 GO:0046483 GO:0046782 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048524 GO:0050434 GO:0050789 GO:0050790 GO:0050792 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051252 GO:0051254 GO:0051336 GO:0051346 GO:0051702 GO:0051704 GO:0051707 GO:0051817 GO:0051851 GO:0052312 GO:0052472 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098586 GO:0140110 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nop52

Protein Analysis

558

Amino Acids

62.14

Weight (kDa)

9.27

Isoelectric Point (pI)

40.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop52 PF05997 11 - 229 3.8e-62 Nucleolar protein,Nop52
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1251
AccB1I GGYRCC 1 cut(s) 1394
AccBSI CCGCTC 2 cut(s) 230, 256
AccII CGCG 1 cut(s) 300
AciI CCGC 8 cut(s) 17, 228, 254, 298, 455, 533, 653, 1487
AcoI YGGCCR 1 cut(s) 984
AcsI RAATTY 2 cut(s) 919, 1177
AcuI CTGAAG 1 cut(s) 1293
AcyI GRCGYC 1 cut(s) 318
AfaI GTAC 1 cut(s) 1548
AflII CTTAAG 1 cut(s) 536
AgsI TTSAA 3 cut(s) 1012, 1376, 1657
AhlI ACTAGT 1 cut(s) 365
AjnI CCWGG 3 cut(s) 792, 1039, 1552
AjuI GAANNNNNNNTTGG 4 cut(s) 650, 682, 1439, 1471
AleI CACNNNNGTG 2 cut(s) 17, 784
AluBI AGCT 6 cut(s) 151, 211, 409, 517, 1134, 1163
AluI AGCT 6 cut(s) 151, 211, 409, 517, 1134, 1163
Alw21I GWGCWC 2 cut(s) 1136, 1534
Alw26I GTCTC 1 cut(s) 69
Alw44I GTGCAC 1 cut(s) 1530
AlwNI CAGNNNCTG 1 cut(s) 1124
Ama87I CYCGRG 1 cut(s) 647
AoxI GGCC 5 cut(s) 28, 160, 521, 984, 1036
ApaI GGGCCC 1 cut(s) 1040
ApaLI GTGCAC 1 cut(s) 1530
ApeKI GCWGC 5 cut(s) 69, 109, 643, 789, 1268
ApoI RAATTY 2 cut(s) 919, 1177
AspLEI GCGC 4 cut(s) 118, 297, 736, 1304
AspS9I GGNCC 9 cut(s) 91, 193, 199, 235, 306, 1036, 1037, 1334, 1556
AsuC2I CCSGG 1 cut(s) 197
AsuHPI GGTGA 5 cut(s) 280, 716, 771, 1184, 1603
AvaI CYCGRG 1 cut(s) 647
AvaII GGWCC 7 cut(s) 91, 193, 199, 235, 306, 1334, 1556
AxyI CCTNAGG 2 cut(s) 86, 323
BaeGI GKGCMC 2 cut(s) 1040, 1534
BalI TGGCCA 1 cut(s) 986
BanI GGYRCC 1 cut(s) 1394
BanII GRGCYC 4 cut(s) 85, 1040, 1136, 1478
BauI CACGAG 1 cut(s) 824
BbsI GAAGAC 2 cut(s) 712, 768
Bbv12I GWGCWC 2 cut(s) 1136, 1534
BbvCI CCTCAGC 1 cut(s) 239
BbvI GCAGC 5 cut(s) 81, 96, 630, 776, 1255
BccI CCATC 2 cut(s) 418, 940
BceAI ACGGC 2 cut(s) 30, 508
BciT130I CCWGG 3 cut(s) 794, 1041, 1554
BclI TGATCA 1 cut(s) 1186
BcnI CCSGG 1 cut(s) 197
BcoDI GTCTC 1 cut(s) 69
BcuI ACTAGT 1 cut(s) 365
BfaI CTAG 3 cut(s) 366, 509, 1521
BfmI CTRYAG 3 cut(s) 1137, 1244, 1317
BfoI RGCGCY 1 cut(s) 1305
BfrI CTTAAG 1 cut(s) 536
BfuAI ACCTGC 1 cut(s) 1251
BisI GCNGC 6 cut(s) 70, 110, 298, 644, 790, 1269
BlsI GCNGC 6 cut(s) 71, 111, 299, 645, 791, 1270
Bme1390I CCNGG 4 cut(s) 197, 794, 1041, 1554
Bme18I GGWCC 7 cut(s) 91, 193, 199, 235, 306, 1334, 1556
BmeT110I CYCGRG 1 cut(s) 647
BmgT120I GGNCC 9 cut(s) 91, 193, 199, 235, 306, 1036, 1037, 1334, 1556
BmiI GGNNCC 7 cut(s) 92, 195, 927, 966, 1038, 1335, 1396
BmrFI CCNGG 4 cut(s) 197, 794, 1041, 1554
BmsI GCATC 4 cut(s) 321, 1192, 1198, 1239
BpiI GAAGAC 2 cut(s) 712, 768
BpmI CTGGAG 1 cut(s) 1536
Bpu10I CCTNAGC 2 cut(s) 239, 518
BpuEI CTTGAG 4 cut(s) 572, 573, 1241, 1520
BpuMI CCSGG 1 cut(s) 197
Bsa29I ATCGAT 2 cut(s) 216, 347
BsaBI GATNNNNATC 1 cut(s) 1188
BsaHI GRCGYC 1 cut(s) 318
BsaJI CCNNGG 3 cut(s) 793, 1039, 1386
BsaXI ACNNNNNCTCC 2 cut(s) 836, 866
Bse118I RCCGGY 2 cut(s) 112, 1277
Bse1I ACTGG 1 cut(s) 54
Bse21I CCTNAGG 2 cut(s) 86, 323
Bse3DI GCAATG 1 cut(s) 492
Bse8I GATNNNNATC 1 cut(s) 1188
BseBI CCWGG 3 cut(s) 794, 1041, 1554
BseCI ATCGAT 2 cut(s) 216, 347
BseDI CCNNGG 3 cut(s) 793, 1039, 1386
BseGI GGATG 3 cut(s) 463, 694, 1291
BseJI GATNNNNATC 1 cut(s) 1188
BseMI GCAATG 1 cut(s) 492
BseMII CTCAG 4 cut(s) 100, 253, 314, 774
BseNI ACTGG 1 cut(s) 54
BseRI GAGGAG 2 cut(s) 452, 956
BseSI GKGCMC 2 cut(s) 1040, 1534
BseXI GCAGC 5 cut(s) 81, 96, 630, 776, 1255
BseYI CCCAGC 1 cut(s) 207
Bsh1236I CGCG 1 cut(s) 300
Bsh1285I CGRYCG 1 cut(s) 220
BshFI GGCC 5 cut(s) 30, 162, 523, 986, 1038
BshNI GGYRCC 1 cut(s) 1394
BshVI ATCGAT 2 cut(s) 216, 347
BsiEI CGRYCG 1 cut(s) 220
BsiHKAI GWGCWC 2 cut(s) 1136, 1534
BsiHKCI CYCGRG 1 cut(s) 647
BsiSI CCGG 4 cut(s) 113, 197, 309, 1278
BslFI GGGAC 2 cut(s) 179, 739
BsmAI GTCTC 1 cut(s) 69
BsmFI GGGAC 2 cut(s) 179, 739
BsnI GGCC 5 cut(s) 30, 162, 523, 986, 1038
BsoBI CYCGRG 1 cut(s) 647
Bsp120I GGGCCC 1 cut(s) 1036
Bsp1286I GDGCHC 5 cut(s) 85, 1040, 1136, 1478, 1534
Bsp143I GATC 2 cut(s) 217, 1186
BspACI CCGC 8 cut(s) 17, 228, 254, 298, 455, 533, 653, 1487
BspANI GGCC 5 cut(s) 30, 162, 523, 986, 1038
BspCNI CTCAG 4 cut(s) 99, 252, 315, 775
BspDI ATCGAT 2 cut(s) 216, 347
BspFNI CGCG 1 cut(s) 300
BspLI GGNNCC 7 cut(s) 92, 195, 927, 966, 1038, 1335, 1396
BspMAI CTGCAG 1 cut(s) 1248
BspMI ACCTGC 1 cut(s) 1251
BspQI GCTCTTC 1 cut(s) 507
BspT107I GGYRCC 1 cut(s) 1394
BspTI CTTAAG 1 cut(s) 536
BsrBI CCGCTC 2 cut(s) 230, 256
BsrDI GCAATG 1 cut(s) 492
BsrFI RCCGGY 2 cut(s) 112, 1277
BsrI ACTGG 1 cut(s) 54
BssAI RCCGGY 2 cut(s) 112, 1277
BssECI CCNNGG 3 cut(s) 793, 1039, 1386
BssMI GATC 2 cut(s) 217, 1186
BssNI GRCGYC 1 cut(s) 318
BssSI CACGAG 1 cut(s) 824
Bst2BI CACGAG 1 cut(s) 824
Bst2UI CCWGG 3 cut(s) 794, 1041, 1554
Bst4CI ACNGT 1 cut(s) 1321
Bst6I CTCTTC 4 cut(s) 507, 653, 1343, 1412
BstACI GRCGYC 1 cut(s) 318
BstAFI CTTAAG 1 cut(s) 536
BstC8I GCNNGC 7 cut(s) 28, 114, 183, 754, 821, 969, 1279
BstDEI CTNAG 8 cut(s) 86, 239, 323, 518, 783, 1344, 1584, 1671
BstF5I GGATG 3 cut(s) 463, 694, 1291
BstFNI CGCG 1 cut(s) 300
BstH2I RGCGCY 1 cut(s) 1305
BstHHI GCGC 4 cut(s) 118, 297, 736, 1304
BstKTI GATC 2 cut(s) 220, 1189
BstMAI GTCTC 1 cut(s) 69
BstMBI GATC 2 cut(s) 217, 1186
BstMCI CGRYCG 1 cut(s) 220
BstMWI GCNNNNNNNGC 7 cut(s) 14, 23, 66, 115, 292, 1274, 1631
BstNI CCWGG 3 cut(s) 794, 1041, 1554
BstSCI CCNGG 4 cut(s) 195, 792, 1039, 1552
BstSFI CTRYAG 3 cut(s) 1137, 1244, 1317
BstSLI GKGCMC 2 cut(s) 1040, 1534
BstUI CGCG 1 cut(s) 300
BstV1I GCAGC 5 cut(s) 81, 96, 630, 776, 1255
BstV2I GAAGAC 2 cut(s) 712, 768
Bsu15I ATCGAT 2 cut(s) 216, 347
Bsu36I CCTNAGG 2 cut(s) 86, 323
BsuRI GGCC 5 cut(s) 30, 162, 523, 986, 1038
BsuTUI ATCGAT 2 cut(s) 216, 347
BtsCI GGATG 3 cut(s) 463, 694, 1291
BveI ACCTGC 1 cut(s) 1251
Cac8I GCNNGC 7 cut(s) 28, 114, 183, 754, 821, 969, 1279
CaiI CAGNNNCTG 1 cut(s) 1124
CfoI GCGC 4 cut(s) 118, 297, 736, 1304
Cfr10I RCCGGY 2 cut(s) 112, 1277
Cfr13I GGNCC 9 cut(s) 91, 193, 199, 235, 306, 1036, 1037, 1334, 1556
ClaI ATCGAT 2 cut(s) 216, 347
CseI GACGC 1 cut(s) 326
Csp6I GTAC 1 cut(s) 1547
CviAII CATG 5 cut(s) 105, 142, 292, 982, 1444
CviQI GTAC 1 cut(s) 1547
DdeI CTNAG 8 cut(s) 86, 239, 323, 518, 783, 1344, 1584, 1671
DpnI GATC 2 cut(s) 219, 1188
DpnII GATC 2 cut(s) 217, 1186
DraI TTTAAA 1 cut(s) 1215
EaeI YGGCCR 1 cut(s) 984
Eam1104I CTCTTC 4 cut(s) 507, 653, 1343, 1412
EarI CTCTTC 4 cut(s) 507, 653, 1343, 1412
Ecl136II GAGCTC 1 cut(s) 1134
Eco147I AGGCCT 2 cut(s) 30, 162
Eco24I GRGCYC 4 cut(s) 85, 1040, 1136, 1478
Eco32I GATATC 1 cut(s) 1236
Eco47I GGWCC 7 cut(s) 91, 193, 199, 235, 306, 1334, 1556
Eco53kI GAGCTC 1 cut(s) 1134
Eco57I CTGAAG 1 cut(s) 1293
Eco81I CCTNAGG 2 cut(s) 86, 323
Eco88I CYCGRG 1 cut(s) 647
EcoICRI GAGCTC 1 cut(s) 1134
EcoO109I RGGNCCY 5 cut(s) 91, 193, 1036, 1037, 1334
EcoRI GAATTC 1 cut(s) 1177
EcoRII CCWGG 3 cut(s) 792, 1039, 1552
EcoRV GATATC 1 cut(s) 1236
EcoT38I GRGCYC 4 cut(s) 85, 1040, 1136, 1478
FaeI CATG 5 cut(s) 108, 145, 295, 985, 1447
FalI AAGNNNNNCTT 2 cut(s) 326, 358
FaqI GGGAC 2 cut(s) 179, 739
FatI CATG 5 cut(s) 104, 141, 291, 981, 1443
FauI CCCGC 2 cut(s) 261, 646
FbaI TGATCA 1 cut(s) 1186
Fnu4HI GCNGC 6 cut(s) 70, 110, 298, 644, 790, 1269
FokI GGATG 3 cut(s) 470, 701, 1298
FriOI GRGCYC 4 cut(s) 85, 1040, 1136, 1478
Fsp4HI GCNGC 6 cut(s) 70, 110, 298, 644, 790, 1269
FspBI CTAG 3 cut(s) 366, 509, 1521
GlaI GCGC 4 cut(s) 117, 296, 735, 1303
GluI GCNGC 6 cut(s) 70, 110, 298, 644, 790, 1269
GsaI CCCAGC 1 cut(s) 211
GsuI CTGGAG 1 cut(s) 1536
HaeII RGCGCY 1 cut(s) 1305
HaeIII GGCC 5 cut(s) 30, 162, 523, 986, 1038
HapII CCGG 4 cut(s) 113, 197, 309, 1278
HgaI GACGC 1 cut(s) 326
HhaI GCGC 4 cut(s) 118, 297, 736, 1304
Hin1I GRCGYC 1 cut(s) 318
Hin1II CATG 5 cut(s) 108, 145, 295, 985, 1447
Hin6I GCGC 4 cut(s) 116, 295, 734, 1302
HinP1I GCGC 4 cut(s) 116, 295, 734, 1302
HinfI GANTC 5 cut(s) 349, 767, 857, 1115, 1121
HpaII CCGG 4 cut(s) 113, 197, 309, 1278
HphI GGTGA 5 cut(s) 280, 716, 771, 1184, 1603
Hpy166II GTNNAC 1 cut(s) 1532
Hpy188I TCNGA 8 cut(s) 423, 598, 964, 1120, 1126, 1183, 1327, 1560
Hpy188III TCNNGA 8 cut(s) 154, 509, 551, 724, 884, 899, 1537, 1618
Hpy8I GTNNAC 1 cut(s) 1532
Hpy99I CGWCG 2 cut(s) 320, 1295
HpyAV CCTTC 8 cut(s) 1027, 1090, 1423, 1518, 1582, 1584, 1615, 1624
HpyCH4III ACNGT 1 cut(s) 1321
HpyCH4IV ACGT 5 cut(s) 126, 418, 951, 1293, 1642
HpyCH4V TGCA 8 cut(s) 752, 823, 1020, 1246, 1252, 1403, 1424, 1532
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 23, 66, 115, 292, 1274, 1631
HpyF3I CTNAG 8 cut(s) 86, 239, 323, 518, 783, 1344, 1584, 1671
HpySE526I ACGT 5 cut(s) 126, 418, 951, 1293, 1642
Hsp92I GRCGYC 1 cut(s) 318
Hsp92II CATG 5 cut(s) 108, 145, 295, 985, 1447
HspAI GCGC 4 cut(s) 116, 295, 734, 1302
KroI GCCGGC 2 cut(s) 112, 1277
KroNI GCCGGC 2 cut(s) 114, 1279
Ksp22I TGATCA 1 cut(s) 1186
Kzo9I GATC 2 cut(s) 217, 1186
LguI GCTCTTC 1 cut(s) 507
LmnI GCTCC 3 cut(s) 406, 964, 1160
Lsp1109I GCAGC 5 cut(s) 81, 96, 630, 776, 1255
LweI GCATC 4 cut(s) 321, 1192, 1198, 1239
MaeI CTAG 3 cut(s) 366, 509, 1521
MaeII ACGT 5 cut(s) 126, 418, 951, 1293, 1642
MaeIII GTNAC 1 cut(s) 1195
MalI GATC 2 cut(s) 219, 1188
MbiI CCGCTC 2 cut(s) 230, 256
MboI GATC 2 cut(s) 217, 1186
MfeI CAATTG 1 cut(s) 729
MhlI GDGCHC 5 cut(s) 85, 1040, 1136, 1478, 1534
MlsI TGGCCA 1 cut(s) 986
MluCI AATT 7 cut(s) 391, 484, 698, 729, 919, 1177, 1453
MluNI TGGCCA 1 cut(s) 986
MlyI GAGTC 1 cut(s) 1115
MmeI TCCRAC 4 cut(s) 414, 648, 822, 834
Mox20I TGGCCA 1 cut(s) 986
MroNI GCCGGC 2 cut(s) 112, 1277
MscI TGGCCA 1 cut(s) 986
MseI TTAA 6 cut(s) 483, 537, 621, 675, 1214, 1496
MslI CAYNNNNRTG 2 cut(s) 17, 784
Msp20I TGGCCA 1 cut(s) 986
MspCI CTTAAG 1 cut(s) 536
MspI CCGG 4 cut(s) 113, 197, 309, 1278
MspR9I CCNGG 4 cut(s) 197, 794, 1041, 1554
MunI CAATTG 1 cut(s) 729
MvaI CCWGG 3 cut(s) 794, 1041, 1554
MvnI CGCG 1 cut(s) 300
MwoI GCNNNNNNNGC 7 cut(s) 14, 23, 66, 115, 292, 1274, 1631
NaeI GCCGGC 2 cut(s) 114, 1279
NciI CCSGG 1 cut(s) 197
NdeII GATC 2 cut(s) 217, 1186
NgoMIV GCCGGC 2 cut(s) 112, 1277
NlaIII CATG 5 cut(s) 108, 145, 295, 985, 1447
NlaIV GGNNCC 7 cut(s) 92, 195, 927, 966, 1038, 1335, 1396
NmeAIII GCCGAG 2 cut(s) 98, 1411
OliI CACNNNNGTG 2 cut(s) 17, 784
PceI AGGCCT 2 cut(s) 30, 162
PciSI GCTCTTC 1 cut(s) 507
PcsI WCGNNNNNNNCGW 1 cut(s) 132
PdiI GCCGGC 2 cut(s) 114, 1279
PfeI GAWTC 4 cut(s) 349, 767, 857, 1115
PflFI GACNNNGTC 1 cut(s) 191
PkrI GCNGC 6 cut(s) 71, 111, 299, 645, 791, 1270
Ple19I CGATCG 1 cut(s) 220
PleI GAGTC 1 cut(s) 1115
PpsI GAGTC 1 cut(s) 1115
PpuMI RGGWCCY 3 cut(s) 91, 193, 1334
Psp124BI GAGCTC 1 cut(s) 1136
Psp5II RGGWCCY 3 cut(s) 91, 193, 1334
Psp6I CCWGG 3 cut(s) 792, 1039, 1552
PspFI CCCAGC 1 cut(s) 207
PspGI CCWGG 3 cut(s) 792, 1039, 1552
PspN4I GGNNCC 7 cut(s) 92, 195, 927, 966, 1038, 1335, 1396
PspOMI GGGCCC 1 cut(s) 1036
PspPI GGNCC 9 cut(s) 91, 193, 199, 235, 306, 1036, 1037, 1334, 1556
PspPPI RGGWCCY 3 cut(s) 91, 193, 1334
PstI CTGCAG 1 cut(s) 1248
PstNI CAGNNNCTG 1 cut(s) 1124
PsyI GACNNNGTC 1 cut(s) 191
PvuI CGATCG 1 cut(s) 220
RsaI GTAC 1 cut(s) 1548
RsaNI GTAC 1 cut(s) 1547
RseI CAYNNNNRTG 2 cut(s) 17, 784
SacI GAGCTC 1 cut(s) 1136
SapI GCTCTTC 1 cut(s) 507
SaqAI TTAA 6 cut(s) 483, 537, 621, 675, 1214, 1496
SatI GCNGC 6 cut(s) 70, 110, 298, 644, 790, 1269
Sau3AI GATC 2 cut(s) 217, 1186
Sau96I GGNCC 9 cut(s) 91, 193, 199, 235, 306, 1036, 1037, 1334, 1556
SchI GAGTC 1 cut(s) 1115
ScrFI CCNGG 4 cut(s) 197, 794, 1041, 1554
SduI GDGCHC 5 cut(s) 85, 1040, 1136, 1478, 1534
SfaNI GCATC 4 cut(s) 321, 1192, 1198, 1239
SfcI CTRYAG 3 cut(s) 1137, 1244, 1317
SinI GGWCC 7 cut(s) 91, 193, 199, 235, 306, 1334, 1556
SmiMI CAYNNNNRTG 2 cut(s) 17, 784
SmlI CTYRAG 5 cut(s) 536, 551, 588, 1220, 1535
SmoI CTYRAG 5 cut(s) 536, 551, 588, 1220, 1535
SpeI ACTAGT 1 cut(s) 365
Sse9I AATT 7 cut(s) 391, 484, 698, 729, 919, 1177, 1453
SseBI AGGCCT 2 cut(s) 30, 162
SsiI CCGC 8 cut(s) 17, 228, 254, 298, 455, 533, 653, 1487
SspMI CTAG 3 cut(s) 366, 509, 1521
SstI GAGCTC 1 cut(s) 1136
StuI AGGCCT 2 cut(s) 30, 162
StyD4I CCNGG 4 cut(s) 195, 792, 1039, 1552
TaaI ACNGT 1 cut(s) 1321
TaiI ACGT 5 cut(s) 129, 421, 954, 1296, 1645
TaqI TCGA 5 cut(s) 216, 315, 347, 636, 1238
TasI AATT 7 cut(s) 391, 484, 698, 729, 919, 1177, 1453
TauI GCSGC 1 cut(s) 300
TfiI GAWTC 4 cut(s) 349, 767, 857, 1115
Tru1I TTAA 6 cut(s) 483, 537, 621, 675, 1214, 1496
Tru9I TTAA 6 cut(s) 483, 537, 621, 675, 1214, 1496
TseI GCWGC 5 cut(s) 69, 109, 643, 789, 1268
TspDTI ATGAA 4 cut(s) 780, 851, 1376, 1460
TspGWI ACGGA 1 cut(s) 1642
Tth111I GACNNNGTC 1 cut(s) 191
Vha464I CTTAAG 1 cut(s) 536
VneI GTGCAC 1 cut(s) 1530
VpaK11BI GGWCC 7 cut(s) 91, 193, 199, 235, 306, 1334, 1556
XapI RAATTY 2 cut(s) 919, 1177
XbaI TCTAGA 1 cut(s) 508
XspI CTAG 3 cut(s) 366, 509, 1521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.