Rh4BG084300

Ribosomal RNA processing protein 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0012270
Physical Location & Seq
Forward (+)
14560552 .. 14563920
3369 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG084300.1

Sequence Viewer

Length: 1659 bp
ATGGACGGCGAAACGGCATCGGAATCCGGCCTGACACTGATAAAGCAGCTCGCATCTTGCAACAATGGCAGCCGCGGCCGGGCCCTTAGGGTTCTCCTCAAGACCTGGCTCCCCACCCAGCTCAACCTCTCCGACGACCACATGAAGAAGCTCTGGAAAGGTCTCTTCTACTGCATGTGGCACGCCGACAAGGCCCCGGCCCAGGCCCAACTCATCGACCGCCTCTCCTCCCTCGTCCCCAGCCTCCACCTCCCGCTCGCCATCGACTACTTCTCGGCGTTCCTCCTCACCATGCGCCGTGAATGGTCCGGCATCGACGCCCTGAGGTTAGACAAGTTCTACCTTTTGATTCGTAGATTCATGGCTAGCTTCTTTGCTTTGATGAGGAATAATTCTTGGGATTTGGAGCTTGTGAAAAAATTGATGGGGGTTTTAATGGAGGGGAGTTTTTTCGCCGAGGATAAGTTTCCGGCGAAAGGGGTTAATTACCATATTGCCTCTGTGTTTCTTGAGGAATTGAGGCCGTTTATGCCGGTGAGGAAGGAAGTGGTTGAGGTGGTTTTGGTGGGGTTTGTTAGGGTTATGGCGAAAGCGAATGATAAGGTGTTGGTGGGGAAGATTAAGGGGAGTATGTTTGATGTGTTGCTTGGGATGGGCAGGAGGCTGTTGGAGGTTAGGAAGTTGGGGGAGGATGTGGATTCGGGGGATGATGTGGTGGTGTTTGGGTCGGTTGCGCTGTGCTTGGGGTTTTCAAGCAGGTTTCATGAAATGGGGGAGTCGGAGGAGTGCTGTCAGGGGAATAGGAAGGTGTTGTTTGGGTTGGATGAGGAGTTTTTGAAGTTGGAGAAGGAGTTGGCGGCTTCTGGGATTGAGGTTTTGATTCCTGATGCTGTGAGGAATGATGATGGTGAGGAAGTGCCGAGTTTGATTCCTATTGTGGGTGAGGAGGGGATGGATGTTGACAACACTGAACCTGGTGAGGTTGCCAATGGGTCTGCTGGGAAGCCTTTGAAGAAGTGCAAGAAGCGAGAGAAGGACCCTGGTGGTGCTGATGTTAAGGCAGAGAAGAAGAAGAAGAAAAAGAAGAAGGAGAAGAAGCACAATGGGATTTTGGATTCTGACCCTGAGAAGAGCCATACGGATAGGGAGAATGAGAATGTGGATGCAAATGGTGAGAACCCAGATAATGAACAGGTTACCGATGGTGATGAGATAAAACTCGATGATTATGCGATCTCGAACCTCCAGATGCAGTTTGAGAAGATTGCTGCTGAAGCAGGCTTGGATCATGATCTTCCAAGTGCCTGTGAATTGCCGGCAGCTACAGCTAATGGTACTGTCTCTAAGAAGAGAAAGAGAGTGAAGAAAGCTGATGAAGTTGTGGAGGATGGCACCAAGGCAAAGAGTGGGGAGAAGAGTGCAAAGAAGGTAAAGTTTTCCATGAAAAACAACTTGGTGTGGAAGCCACAAAGCCCTTTACCCCCTCAAAATCTAAGATTGCCCCCGTCTGCTACACCTAGAGGAAGTGCACTCAAGCAAGGAGTACCTCCAGGTCCCGTCAGGGAAATGCCTCCCCCAACCAAAAAAGTGAAAAGAGTTGTGAAGAAGACTCGGAAAGTTGTCAAACGCGTGAAGAAGTTGAAATCTCGTTCTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000791 GO:0000792 GO:0001652 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010563 GO:0010604 GO:0010628 GO:0010921 GO:0010923 GO:0010941 GO:0010942 GO:0016070 GO:0016072 GO:0019219 GO:0019220 GO:0019222 GO:0022613 GO:0030684 GO:0030687 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0034260 GO:0034470 GO:0034641 GO:0034660 GO:0035303 GO:0035305 GO:0035821 GO:0042254 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043086 GO:0043087 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043900 GO:0043902 GO:0043903 GO:0043921 GO:0043923 GO:0044085 GO:0044092 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045936 GO:0045944 GO:0046483 GO:0046782 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048524 GO:0050434 GO:0050789 GO:0050790 GO:0050792 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051252 GO:0051254 GO:0051336 GO:0051346 GO:0051702 GO:0051704 GO:0051707 GO:0051817 GO:0051851 GO:0052312 GO:0052472 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098586 GO:0140110 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nop52

Protein Analysis

552

Amino Acids

61.36

Weight (kDa)

9.17

Isoelectric Point (pI)

39.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop52 PF05997 11 - 227 2.5e-62 Nucleolar protein,Nop52
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 747
AccB1I GGYRCC 1 cut(s) 1391
AccBSI CCGCTC 1 cut(s) 256
AccII CGCG 2 cut(s) 75, 1629
AciI CCGC 5 cut(s) 73, 75, 220, 254, 857
AclWI GGATC 1 cut(s) 1293
AcoI YGGCCR 1 cut(s) 76
AcuI CTGAAG 1 cut(s) 1293
AcyI GRCGYC 1 cut(s) 318
AfaI GTAC 2 cut(s) 1336, 1545
AfiI CCNNNNNNNGG 4 cut(s) 79, 202, 476, 938
AflIII ACRYGT 1 cut(s) 1627
AgsI TTSAA 4 cut(s) 753, 838, 1012, 1642
AjnI CCWGG 5 cut(s) 104, 201, 973, 1039, 1549
AjuI GAANNNNNNNTTGG 2 cut(s) 1436, 1468
AluBI AGCT 8 cut(s) 49, 121, 151, 369, 409, 1322, 1328, 1370
AluI AGCT 8 cut(s) 49, 121, 151, 369, 409, 1322, 1328, 1370
Alw21I GWGCWC 1 cut(s) 1531
Alw26I GTCTC 2 cut(s) 167, 1345
Alw44I GTGCAC 1 cut(s) 1527
AlwI GGATC 1 cut(s) 1293
AoxI GGCC 7 cut(s) 28, 76, 81, 192, 198, 204, 521
ApaI GGGCCC 1 cut(s) 85
ApaLI GTGCAC 1 cut(s) 1527
ApeKI GCWGC 4 cut(s) 46, 69, 1268, 1319
AspLEI GCGC 2 cut(s) 297, 736
AspS9I GGNCC 8 cut(s) 81, 82, 193, 199, 205, 306, 1036, 1553
AsuC2I CCSGG 2 cut(s) 80, 197
AsuHPI GGTGA 7 cut(s) 280, 547, 920, 953, 989, 1184, 1217
AsuNHI GCTAGC 1 cut(s) 365
AvaII GGWCC 3 cut(s) 306, 1036, 1553
AxyI CCTNAGG 2 cut(s) 86, 323
BaeGI GKGCMC 2 cut(s) 85, 1531
BanI GGYRCC 1 cut(s) 1391
BanII GRGCYC 1 cut(s) 85
BbsI GAAGAC 1 cut(s) 1613
Bbv12I GWGCWC 1 cut(s) 1531
BbvI GCAGC 4 cut(s) 58, 81, 1255, 1331
BccI CCATC 7 cut(s) 269, 418, 646, 899, 946, 1196, 1382
BceAI ACGGC 4 cut(s) 22, 30, 282, 508
BcgI CGANNNNNNTGC 2 cut(s) 1211, 1245
BciT130I CCWGG 5 cut(s) 106, 203, 975, 1041, 1551
BcnI CCSGG 2 cut(s) 80, 197
BcoDI GTCTC 2 cut(s) 167, 1345
BfaI CTAG 2 cut(s) 366, 1518
BfmI CTRYAG 1 cut(s) 1323
BfuAI ACCTGC 1 cut(s) 747
BglI GCCNNNNNGGC 1 cut(s) 191
BisI GCNGC 7 cut(s) 47, 70, 73, 76, 858, 1269, 1320
BlsI GCNGC 7 cut(s) 48, 71, 74, 77, 859, 1270, 1321
Bme1390I CCNGG 7 cut(s) 80, 106, 197, 203, 975, 1041, 1551
Bme18I GGWCC 3 cut(s) 306, 1036, 1553
BmgT120I GGNCC 8 cut(s) 81, 82, 193, 199, 205, 306, 1036, 1553
BmiI GGNNCC 6 cut(s) 83, 110, 195, 1038, 1393, 1555
BmrFI CCNGG 7 cut(s) 80, 106, 197, 203, 975, 1041, 1551
BmsI GCATC 6 cut(s) 26, 62, 321, 877, 1153, 1239
BmtI GCTAGC 1 cut(s) 369
BpiI GAAGAC 1 cut(s) 1613
BpmI CTGGAG 2 cut(s) 1229, 1533
BpuEI CTTGAG 3 cut(s) 83, 530, 1517
BpuMI CCSGG 2 cut(s) 80, 197
BsaBI GATNNNNATC 1 cut(s) 1290
BsaHI GRCGYC 1 cut(s) 318
BsaI GGTCTC 1 cut(s) 167
BsaJI CCNNGG 6 cut(s) 73, 195, 201, 456, 1039, 1395
BsaXI ACNNNNNCTCC 4 cut(s) 209, 239, 836, 866
Bsc4I CCNNNNNNNGG 4 cut(s) 79, 202, 476, 938
Bse118I RCCGGY 2 cut(s) 532, 1315
Bse21I CCTNAGG 2 cut(s) 86, 323
Bse8I GATNNNNATC 1 cut(s) 1290
BseBI CCWGG 5 cut(s) 106, 203, 975, 1041, 1551
BseDI CCNNGG 6 cut(s) 73, 195, 201, 456, 1039, 1395
BseGI GGATG 8 cut(s) 657, 697, 712, 829, 957, 961, 1168, 1393
BseJI GATNNNNATC 1 cut(s) 1290
BseLI CCNNNNNNNGG 4 cut(s) 79, 202, 476, 938
BseMII CTCAG 2 cut(s) 314, 1116
BseRI GAGGAG 6 cut(s) 86, 217, 275, 797, 842, 959
BseSI GKGCMC 2 cut(s) 85, 1531
BseX3I CGGCCG 1 cut(s) 76
BseXI GCAGC 4 cut(s) 58, 81, 1255, 1331
BseYI CCCAGC 3 cut(s) 117, 239, 998
Bsh1236I CGCG 2 cut(s) 75, 1629
Bsh1285I CGRYCG 2 cut(s) 79, 220
BshFI GGCC 7 cut(s) 30, 78, 83, 194, 200, 206, 523
BshNI GGYRCC 1 cut(s) 1391
BsiEI CGRYCG 2 cut(s) 79, 220
BsiHKAI GWGCWC 1 cut(s) 1531
BsiSI CCGG 7 cut(s) 27, 79, 197, 309, 470, 533, 1316
BslFI GGGAC 2 cut(s) 221, 1539
BslI CCNNNNNNNGG 4 cut(s) 79, 202, 476, 938
BsmAI GTCTC 2 cut(s) 167, 1345
BsmFI GGGAC 2 cut(s) 221, 1539
BsnI GGCC 7 cut(s) 30, 78, 83, 194, 200, 206, 523
Bso31I GGTCTC 1 cut(s) 167
Bsp120I GGGCCC 1 cut(s) 81
Bsp1286I GDGCHC 2 cut(s) 85, 1531
Bsp143I GATC 3 cut(s) 1233, 1285, 1291
BspACI CCGC 5 cut(s) 73, 75, 220, 254, 857
BspANI GGCC 7 cut(s) 30, 78, 83, 194, 200, 206, 523
BspCNI CTCAG 2 cut(s) 315, 1117
BspFNI CGCG 2 cut(s) 75, 1629
BspHI TCATGA 2 cut(s) 763, 1288
BspLI GGNNCC 6 cut(s) 83, 110, 195, 1038, 1393, 1555
BspMI ACCTGC 1 cut(s) 747
BspOI GCTAGC 1 cut(s) 369
BspPI GGATC 1 cut(s) 1293
BspQI GCTCTTC 1 cut(s) 1124
BspT107I GGYRCC 1 cut(s) 1391
BspTNI GGTCTC 1 cut(s) 167
BsrBI CCGCTC 1 cut(s) 256
BsrFI RCCGGY 2 cut(s) 532, 1315
BssAI RCCGGY 2 cut(s) 532, 1315
BssECI CCNNGG 6 cut(s) 73, 195, 201, 456, 1039, 1395
BssMI GATC 3 cut(s) 1233, 1285, 1291
BssNI GRCGYC 1 cut(s) 318
BssT1I CCWWGG 1 cut(s) 1395
Bst2UI CCWGG 5 cut(s) 106, 203, 975, 1041, 1551
Bst4CI ACNGT 1 cut(s) 1339
Bst6I CTCTTC 4 cut(s) 170, 1124, 1343, 1409
BstACI GRCGYC 1 cut(s) 318
BstC8I GCNNGC 6 cut(s) 51, 183, 258, 367, 1279, 1317
BstDEI CTNAG 6 cut(s) 86, 323, 1125, 1344, 1493, 1656
BstDSI CCRYGG 1 cut(s) 73
BstEII GGTNACC 1 cut(s) 1195
BstF5I GGATG 8 cut(s) 657, 697, 712, 829, 957, 961, 1168, 1393
BstFNI CGCG 2 cut(s) 75, 1629
BstHHI GCGC 2 cut(s) 297, 736
BstKTI GATC 3 cut(s) 1236, 1288, 1294
BstMAI GTCTC 2 cut(s) 167, 1345
BstMBI GATC 3 cut(s) 1233, 1285, 1291
BstMCI CGRYCG 2 cut(s) 79, 220
BstMWI GCNNNNNNNGC 6 cut(s) 66, 75, 191, 529, 1274, 1325
BstNI CCWGG 5 cut(s) 106, 203, 975, 1041, 1551
BstNSI RCATGY 1 cut(s) 178
BstPI GGTNACC 1 cut(s) 1195
BstSCI CCNGG 7 cut(s) 78, 104, 195, 201, 973, 1039, 1549
BstSFI CTRYAG 1 cut(s) 1323
BstSLI GKGCMC 2 cut(s) 85, 1531
BstUI CGCG 2 cut(s) 75, 1629
BstV1I GCAGC 4 cut(s) 58, 81, 1255, 1331
BstV2I GAAGAC 1 cut(s) 1613
BstZI CGGCCG 1 cut(s) 76
Bsu36I CCTNAGG 2 cut(s) 86, 323
BsuRI GGCC 7 cut(s) 30, 78, 83, 194, 200, 206, 523
BtgI CCRYGG 1 cut(s) 73
BtsCI GGATG 8 cut(s) 657, 697, 712, 829, 957, 961, 1168, 1393
BtsIMutI CAGTG 2 cut(s) 35, 966
BveI ACCTGC 1 cut(s) 747
Cac8I GCNNGC 6 cut(s) 51, 183, 258, 367, 1279, 1317
CciI TCATGA 2 cut(s) 763, 1288
CfoI GCGC 2 cut(s) 297, 736
Cfr10I RCCGGY 2 cut(s) 532, 1315
Cfr13I GGNCC 8 cut(s) 81, 82, 193, 199, 205, 306, 1036, 1553
Cfr42I CCGCGG 1 cut(s) 76
CseI GACGC 1 cut(s) 326
CsiI ACCWGGT 1 cut(s) 973
Csp6I GTAC 2 cut(s) 1335, 1544
CviAII CATG 7 cut(s) 142, 175, 292, 361, 764, 1289, 1441
CviQI GTAC 2 cut(s) 1335, 1544
DdeI CTNAG 6 cut(s) 86, 323, 1125, 1344, 1493, 1656
DpnI GATC 3 cut(s) 1235, 1287, 1293
DpnII GATC 3 cut(s) 1233, 1285, 1291
EaeI YGGCCR 1 cut(s) 76
EagI CGGCCG 1 cut(s) 76
Eam1104I CTCTTC 4 cut(s) 170, 1124, 1343, 1409
EarI CTCTTC 4 cut(s) 170, 1124, 1343, 1409
EclXI CGGCCG 1 cut(s) 76
Eco130I CCWWGG 1 cut(s) 1395
Eco24I GRGCYC 1 cut(s) 85
Eco31I GGTCTC 1 cut(s) 167
Eco47I GGWCC 3 cut(s) 306, 1036, 1553
Eco52I CGGCCG 1 cut(s) 76
Eco57I CTGAAG 1 cut(s) 1293
Eco81I CCTNAGG 2 cut(s) 86, 323
Eco91I GGTNACC 1 cut(s) 1195
EcoO109I RGGNCCY 4 cut(s) 82, 193, 1036, 1553
EcoO65I GGTNACC 1 cut(s) 1195
EcoRII CCWGG 5 cut(s) 104, 201, 973, 1039, 1549
EcoT14I CCWWGG 1 cut(s) 1395
EcoT38I GRGCYC 1 cut(s) 85
ErhI CCWWGG 1 cut(s) 1395
FaeI CATG 7 cut(s) 145, 178, 295, 364, 767, 1292, 1444
FaqI GGGAC 2 cut(s) 221, 1539
FatI CATG 7 cut(s) 141, 174, 291, 360, 763, 1288, 1440
FauI CCCGC 1 cut(s) 261
Fnu4HI GCNGC 7 cut(s) 47, 70, 73, 76, 858, 1269, 1320
FokI GGATG 8 cut(s) 664, 704, 719, 836, 964, 968, 1175, 1400
FriOI GRGCYC 1 cut(s) 85
Fsp4HI GCNGC 7 cut(s) 47, 70, 73, 76, 858, 1269, 1320
FspBI CTAG 2 cut(s) 366, 1518
GlaI GCGC 2 cut(s) 296, 735
GluI GCNGC 7 cut(s) 47, 70, 73, 76, 858, 1269, 1320
GsaI CCCAGC 3 cut(s) 121, 243, 1002
GsuI CTGGAG 2 cut(s) 1229, 1533
HaeIII GGCC 7 cut(s) 30, 78, 83, 194, 200, 206, 523
HapII CCGG 7 cut(s) 27, 79, 197, 309, 470, 533, 1316
HgaI GACGC 1 cut(s) 326
HhaI GCGC 2 cut(s) 297, 736
Hin1I GRCGYC 1 cut(s) 318
Hin1II CATG 7 cut(s) 145, 178, 295, 364, 767, 1292, 1444
Hin6I GCGC 2 cut(s) 295, 734
HinP1I GCGC 2 cut(s) 295, 734
HincII GTYRAC 1 cut(s) 961
HindII GTYRAC 1 cut(s) 961
HinfI GANTC 9 cut(s) 23, 349, 357, 698, 776, 880, 928, 1115, 1609
HpaII CCGG 7 cut(s) 27, 79, 197, 309, 470, 533, 1316
HphI GGTGA 7 cut(s) 280, 547, 920, 953, 989, 1184, 1217
Hpy166II GTNNAC 2 cut(s) 961, 1529
Hpy188I TCNGA 5 cut(s) 22, 133, 781, 1120, 1614
Hpy188III TCNNGA 8 cut(s) 100, 154, 509, 764, 884, 1237, 1246, 1289
Hpy8I GTNNAC 2 cut(s) 961, 1529
Hpy99I CGWCG 2 cut(s) 137, 320
HpyAV CCTTC 6 cut(s) 535, 799, 841, 1027, 1081, 1420
HpyCH4III ACNGT 1 cut(s) 1339
HpyCH4V TGCA 7 cut(s) 60, 174, 1020, 1166, 1252, 1421, 1529
HpyF10VI GCNNNNNNNGC 6 cut(s) 66, 75, 191, 529, 1274, 1325
HpyF3I CTNAG 6 cut(s) 86, 323, 1125, 1344, 1493, 1656
Hsp92I GRCGYC 1 cut(s) 318
Hsp92II CATG 7 cut(s) 145, 178, 295, 364, 767, 1292, 1444
HspAI GCGC 2 cut(s) 295, 734
KroI GCCGGC 1 cut(s) 1315
KroNI GCCGGC 1 cut(s) 1317
KspI CCGCGG 1 cut(s) 76
Kzo9I GATC 3 cut(s) 1233, 1285, 1291
LguI GCTCTTC 1 cut(s) 1124
LmnI GCTCC 2 cut(s) 114, 406
Lsp1109I GCAGC 4 cut(s) 58, 81, 1255, 1331
LweI GCATC 6 cut(s) 26, 62, 321, 877, 1153, 1239
MabI ACCWGGT 1 cut(s) 973
MaeI CTAG 2 cut(s) 366, 1518
MaeIII GTNAC 1 cut(s) 1195
MalI GATC 3 cut(s) 1235, 1287, 1293
MbiI CCGCTC 1 cut(s) 256
MboI GATC 3 cut(s) 1233, 1285, 1291
MhlI GDGCHC 2 cut(s) 85, 1531
MluCI AATT 5 cut(s) 391, 419, 484, 515, 1310
MluI ACGCGT 1 cut(s) 1627
MlyI GAGTC 2 cut(s) 785, 1603
MmeI TCCRAC 5 cut(s) 156, 648, 759, 801, 822
MroNI GCCGGC 1 cut(s) 1315
MseI TTAA 4 cut(s) 434, 483, 621, 1056
MspA1I CMGCKG 1 cut(s) 75
MspI CCGG 7 cut(s) 27, 79, 197, 309, 470, 533, 1316
MspR9I CCNGG 7 cut(s) 80, 106, 197, 203, 975, 1041, 1551
MvaI CCWGG 5 cut(s) 106, 203, 975, 1041, 1551
MvnI CGCG 2 cut(s) 75, 1629
MwoI GCNNNNNNNGC 6 cut(s) 66, 75, 191, 529, 1274, 1325
NaeI GCCGGC 1 cut(s) 1317
NciI CCSGG 2 cut(s) 80, 197
NdeII GATC 3 cut(s) 1233, 1285, 1291
NgoMIV GCCGGC 1 cut(s) 1315
NheI GCTAGC 1 cut(s) 365
NlaIII CATG 7 cut(s) 145, 178, 295, 364, 767, 1292, 1444
NlaIV GGNNCC 6 cut(s) 83, 110, 195, 1038, 1393, 1555
NmeAIII GCCGAG 3 cut(s) 254, 481, 945
NspI RCATGY 1 cut(s) 178
PagI TCATGA 2 cut(s) 763, 1288
PciSI GCTCTTC 1 cut(s) 1124
PdiI GCCGGC 1 cut(s) 1317
PfeI GAWTC 7 cut(s) 23, 349, 357, 698, 880, 928, 1115
PkrI GCNGC 7 cut(s) 48, 71, 74, 77, 859, 1270, 1321
PleI GAGTC 2 cut(s) 784, 1603
PpsI GAGTC 2 cut(s) 784, 1603
PpuMI RGGWCCY 2 cut(s) 1036, 1553
Psp5II RGGWCCY 2 cut(s) 1036, 1553
Psp6I CCWGG 5 cut(s) 104, 201, 973, 1039, 1549
PspEI GGTNACC 1 cut(s) 1195
PspFI CCCAGC 3 cut(s) 117, 239, 998
PspGI CCWGG 5 cut(s) 104, 201, 973, 1039, 1549
PspN4I GGNNCC 6 cut(s) 83, 110, 195, 1038, 1393, 1555
PspOMI GGGCCC 1 cut(s) 81
PspPI GGNCC 8 cut(s) 81, 82, 193, 199, 205, 306, 1036, 1553
PspPPI RGGWCCY 2 cut(s) 1036, 1553
RsaI GTAC 2 cut(s) 1336, 1545
RsaNI GTAC 2 cut(s) 1335, 1544
SacII CCGCGG 1 cut(s) 76
SapI GCTCTTC 1 cut(s) 1124
SaqAI TTAA 4 cut(s) 434, 483, 621, 1056
SatI GCNGC 7 cut(s) 47, 70, 73, 76, 858, 1269, 1320
Sau3AI GATC 3 cut(s) 1233, 1285, 1291
Sau96I GGNCC 8 cut(s) 81, 82, 193, 199, 205, 306, 1036, 1553
SchI GAGTC 2 cut(s) 785, 1603
ScrFI CCNGG 7 cut(s) 80, 106, 197, 203, 975, 1041, 1551
SduI GDGCHC 2 cut(s) 85, 1531
SexAI ACCWGGT 1 cut(s) 973
SfaNI GCATC 6 cut(s) 26, 62, 321, 877, 1153, 1239
SfcI CTRYAG 1 cut(s) 1323
Sfr303I CCGCGG 1 cut(s) 76
SgrBI CCGCGG 1 cut(s) 76
SinI GGWCC 3 cut(s) 306, 1036, 1553
SmlI CTYRAG 3 cut(s) 98, 509, 1532
SmoI CTYRAG 3 cut(s) 98, 509, 1532
Sse9I AATT 5 cut(s) 391, 419, 484, 515, 1310
SsiI CCGC 5 cut(s) 73, 75, 220, 254, 857
SspMI CTAG 2 cut(s) 366, 1518
StyD4I CCNGG 7 cut(s) 78, 104, 195, 201, 973, 1039, 1549
StyI CCWWGG 1 cut(s) 1395
TaaI ACNGT 1 cut(s) 1339
TaqI TCGA 5 cut(s) 216, 264, 315, 1221, 1238
TasI AATT 5 cut(s) 391, 419, 484, 515, 1310
TauI GCSGC 3 cut(s) 75, 78, 860
TfiI GAWTC 7 cut(s) 23, 349, 357, 698, 880, 928, 1115
Tru1I TTAA 4 cut(s) 434, 483, 621, 1056
Tru9I TTAA 4 cut(s) 434, 483, 621, 1056
TscAI CASTG 2 cut(s) 42, 973
TseI GCWGC 4 cut(s) 46, 69, 1268, 1319
TspDTI ATGAA 7 cut(s) 158, 349, 752, 780, 1203, 1389, 1457
TspGWI ACGGA 1 cut(s) 1154
TspRI CASTG 2 cut(s) 42, 973
VneI GTGCAC 1 cut(s) 1527
VpaK11BI GGWCC 3 cut(s) 306, 1036, 1553
XceI RCATGY 1 cut(s) 178
XspI CTAG 2 cut(s) 366, 1518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.