RLG00000009340

Ribosomal RNA processing protein 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0012270
Physical Location & Seq
Reverse (-)
51323851 .. 51325625
1775 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009340

Sequence Viewer

Length: 1653 bp
ATGGACGCCGAAACGGCATCGGAATCCGGCCTAACACTGATAAAGCAGCTCGCATCTTGCAACAATGGCAGCCGCGGCCGGGCCCTTAGGGTTCTCCTCAAGACCTGGCTCCCCACCCAGCTCAACCTCTCCGACGACCACATGAAGAAGCTCTGGAAAGGCCTCTTCTACTGTATGTGGCACGCCGACAAGGCCCCGGCCCAGGCCCAACTCATCGACCGCCTCTCCTCCCTCGTCCCCAGCCTCCACCTCCCGCTCGCCATCGACTACTTCTCGGCGTTCCTCCTCACCATTCGCCGCGAATGGTCCGGCATCGACGCCCTGAGGTTAGACAAGTTCTACCTTTTGATTCGTAGATTCATGGCTAGTTTCTTTGCTTTGATGAGGAATAATGCTTGGGATTTGGAGCTTGTGAAAAAATTGATGGGAGTTTTAATGGAGGGGAGTTTTTTCGCCGAGGATAAGTTTCCGGCGAAAGGGGTTAATTACCATATTGCCTCTGTGTTTCTTGAGGAATTGAGGCCGTTTATGCCGGTGAGGAAGGAAGTGGTTGAGGTGGTTTTAGTGGGGTTTGTTAGGGTTATGGCGAAAGCGAATGATAAGGTGTTGGTGGAGAAGACTAAAGGGAGTATGTTTGATGTGTTGCTTGGGATGGGGAGGAGGCTGTTGGAGGTTAGGAAGTTGGGGGAGGATGTGGATTCGGGGGATGATGTGGTGGTGTTTGGGTCCGTTGCGCTGTGCTTGGGGTTTTCGAGCAGGTTTCATGAAATGGGGGAGTCGGAGGAGTGCTGTCAGGGGAATAGGAAGGTGTTGTTTGGGTTGGATGAGGAGTTTTTGAAGTTGGAGAAGGAGTTGGCGGCTTCGGGGATTGAGGTTTTGATTCCTGATGCTGTGAGGAATGATGATGAGGAAGTGCCAAGTTTGATTCCTATTGTGGGTGAGGGGATGGATGTTGATAACACTGAACCTGGTGAGGTTGCCAATGGGTCTGCTGGGAAGCCTTTGAAGAAGTGCAAGAAGCGAGAGAAGGACCCTGGTGGTGCTGATGTTAAGGCAGAGAAGAAGAAGAAGAAAAAGAAGAAGGAGAAGAAGCAGAATGGGATTTTGGATTCTGACCCTGAGAAGAGCCATACGGATAGGGAGAATGAGAATGTGGATGCAAATGATGAGAACCCAGATAATGAACAGGTTACTGATGGTGATGAGATAAAACTTGATGATTATGCGATCTCGAACCTCCAGATGCAGTTTGAGAAGATTGCTGCTGAAGCAGGCTTGGATCATGATCTTCCAAGTGCCTGTGAATTGCCGACAGCTACAGCTAATGGTGCTGTCTCGAAGAAGAGAAAGAGAGTGAAGAAAGCTGATGAAGTTGTGGAGGATGGCACCAAGGCAAAGAGTGGGGAGAAGAGTGCAAAGAAGGTAAAGTTTTCCATGAAAAACAACTTGGTGTGGAAGCCGCAAAGCCCTTTACCCCCTCAAAATCTAAGATTGCCCCCGTCTGCTACACCTAGAGGAAGTGCACTTAAGCAAGGAGTACCTCCAGGTCCCGTCAGGGAAATGCCTCCCCCAACCAAAAAAGTGAAAAGAGTTGTGAAGAAGACTCGGAAAGTTGTCAAACGCGTAAAGAAGTTGAAATCTCGTTCTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000791 GO:0000792 GO:0001652 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010563 GO:0010604 GO:0010628 GO:0010921 GO:0010923 GO:0010941 GO:0010942 GO:0016070 GO:0016072 GO:0019219 GO:0019220 GO:0019222 GO:0022613 GO:0030684 GO:0030687 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0034260 GO:0034470 GO:0034641 GO:0034660 GO:0035303 GO:0035305 GO:0035821 GO:0042254 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043086 GO:0043087 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043900 GO:0043902 GO:0043903 GO:0043921 GO:0043923 GO:0044085 GO:0044092 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045936 GO:0045944 GO:0046483 GO:0046782 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048524 GO:0050434 GO:0050789 GO:0050790 GO:0050792 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051252 GO:0051254 GO:0051336 GO:0051346 GO:0051702 GO:0051704 GO:0051707 GO:0051817 GO:0051851 GO:0052312 GO:0052472 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098586 GO:0140110 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nop52

Protein Analysis

551

Amino Acids

61.26

Weight (kDa)

9.12

Isoelectric Point (pI)

39.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop52 PF05997 11 - 227 1e-61 Nucleolar protein,Nop52
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 747
AccB1I GGYRCC 1 cut(s) 1385
AccBSI CCGCTC 1 cut(s) 256
AccII CGCG 3 cut(s) 75, 300, 1623
AciI CCGC 7 cut(s) 73, 75, 220, 254, 298, 857, 1460
AclWI GGATC 1 cut(s) 1287
AcoI YGGCCR 1 cut(s) 76
AcuI CTGAAG 1 cut(s) 1287
AcyI GRCGYC 2 cut(s) 6, 318
AfaI GTAC 1 cut(s) 1539
AfiI CCNNNNNNNGG 4 cut(s) 79, 202, 476, 935
AflII CTTAAG 1 cut(s) 1526
AflIII ACRYGT 1 cut(s) 1621
AgsI TTSAA 3 cut(s) 838, 1006, 1636
AjnI CCWGG 5 cut(s) 104, 201, 967, 1033, 1543
AjuI GAANNNNNNNTTGG 4 cut(s) 1088, 1120, 1430, 1462
AluBI AGCT 7 cut(s) 49, 121, 151, 409, 1316, 1322, 1364
AluI AGCT 7 cut(s) 49, 121, 151, 409, 1316, 1322, 1364
Alw21I GWGCWC 1 cut(s) 1525
Alw26I GTCTC 1 cut(s) 1339
Alw44I GTGCAC 1 cut(s) 1521
AlwI GGATC 1 cut(s) 1287
AoxI GGCC 8 cut(s) 28, 76, 81, 160, 192, 198, 204, 521
ApaI GGGCCC 1 cut(s) 85
ApaLI GTGCAC 1 cut(s) 1521
ApeKI GCWGC 3 cut(s) 46, 69, 1262
AspLEI GCGC 1 cut(s) 736
AspS9I GGNCC 9 cut(s) 81, 82, 193, 199, 205, 306, 726, 1030, 1547
AsuC2I CCSGG 2 cut(s) 80, 197
AsuHPI GGTGA 5 cut(s) 280, 547, 950, 983, 1211
AvaII GGWCC 4 cut(s) 306, 726, 1030, 1547
AxyI CCTNAGG 2 cut(s) 86, 323
BaeGI GKGCMC 2 cut(s) 85, 1525
BanI GGYRCC 1 cut(s) 1385
BanII GRGCYC 1 cut(s) 85
BbsI GAAGAC 2 cut(s) 623, 1607
Bbv12I GWGCWC 1 cut(s) 1525
BbvI GCAGC 3 cut(s) 58, 81, 1249
BccI CCATC 6 cut(s) 269, 418, 646, 940, 1190, 1376
BceAI ACGGC 2 cut(s) 30, 508
BciT130I CCWGG 5 cut(s) 106, 203, 969, 1035, 1545
BcnI CCSGG 2 cut(s) 80, 197
BcoDI GTCTC 1 cut(s) 1339
BfaI CTAG 2 cut(s) 366, 1512
BfmI CTRYAG 1 cut(s) 1317
BfrI CTTAAG 1 cut(s) 1526
BfuAI ACCTGC 1 cut(s) 747
BglI GCCNNNNNGGC 2 cut(s) 14, 191
BisI GCNGC 8 cut(s) 47, 70, 73, 76, 298, 858, 1263, 1460
BlsI GCNGC 8 cut(s) 48, 71, 74, 77, 299, 859, 1264, 1461
Bme1390I CCNGG 7 cut(s) 80, 106, 197, 203, 969, 1035, 1545
Bme18I GGWCC 4 cut(s) 306, 726, 1030, 1547
BmgT120I GGNCC 9 cut(s) 81, 82, 193, 199, 205, 306, 726, 1030, 1547
BmiI GGNNCC 7 cut(s) 83, 110, 195, 727, 1032, 1387, 1549
BmrFI CCNGG 7 cut(s) 80, 106, 197, 203, 969, 1035, 1545
BmsI GCATC 6 cut(s) 26, 62, 321, 877, 1147, 1233
BpiI GAAGAC 2 cut(s) 623, 1607
BpmI CTGGAG 2 cut(s) 1223, 1527
BpuEI CTTGAG 2 cut(s) 83, 530
BpuMI CCSGG 2 cut(s) 80, 197
BsaBI GATNNNNATC 1 cut(s) 1284
BsaHI GRCGYC 2 cut(s) 6, 318
BsaJI CCNNGG 6 cut(s) 73, 195, 201, 456, 1033, 1389
BsaXI ACNNNNNCTCC 4 cut(s) 209, 239, 836, 866
Bsc4I CCNNNNNNNGG 4 cut(s) 79, 202, 476, 935
Bse118I RCCGGY 1 cut(s) 532
Bse21I CCTNAGG 2 cut(s) 86, 323
Bse8I GATNNNNATC 1 cut(s) 1284
BseBI CCWGG 5 cut(s) 106, 203, 969, 1035, 1545
BseDI CCNNGG 6 cut(s) 73, 195, 201, 456, 1033, 1389
BseGI GGATG 8 cut(s) 657, 697, 712, 829, 951, 955, 1162, 1387
BseJI GATNNNNATC 1 cut(s) 1284
BseLI CCNNNNNNNGG 4 cut(s) 79, 202, 476, 935
BseMII CTCAG 2 cut(s) 314, 1110
BseRI GAGGAG 6 cut(s) 86, 217, 275, 673, 797, 842
BseSI GKGCMC 2 cut(s) 85, 1525
BseX3I CGGCCG 1 cut(s) 76
BseXI GCAGC 3 cut(s) 58, 81, 1249
BseYI CCCAGC 3 cut(s) 117, 239, 992
Bsh1236I CGCG 3 cut(s) 75, 300, 1623
Bsh1285I CGRYCG 2 cut(s) 79, 220
BshFI GGCC 8 cut(s) 30, 78, 83, 162, 194, 200, 206, 523
BshNI GGYRCC 1 cut(s) 1385
BsiEI CGRYCG 2 cut(s) 79, 220
BsiHKAI GWGCWC 1 cut(s) 1525
BsiSI CCGG 6 cut(s) 27, 79, 197, 309, 470, 533
BslFI GGGAC 2 cut(s) 221, 1533
BslI CCNNNNNNNGG 4 cut(s) 79, 202, 476, 935
BsmAI GTCTC 1 cut(s) 1339
BsmFI GGGAC 2 cut(s) 221, 1533
BsnI GGCC 8 cut(s) 30, 78, 83, 162, 194, 200, 206, 523
Bsp120I GGGCCC 1 cut(s) 81
Bsp1286I GDGCHC 2 cut(s) 85, 1525
Bsp143I GATC 3 cut(s) 1227, 1279, 1285
BspACI CCGC 7 cut(s) 73, 75, 220, 254, 298, 857, 1460
BspANI GGCC 8 cut(s) 30, 78, 83, 162, 194, 200, 206, 523
BspCNI CTCAG 2 cut(s) 315, 1111
BspFNI CGCG 3 cut(s) 75, 300, 1623
BspHI TCATGA 2 cut(s) 763, 1282
BspLI GGNNCC 7 cut(s) 83, 110, 195, 727, 1032, 1387, 1549
BspMI ACCTGC 1 cut(s) 747
BspPI GGATC 1 cut(s) 1287
BspQI GCTCTTC 1 cut(s) 1118
BspT107I GGYRCC 1 cut(s) 1385
BspTI CTTAAG 1 cut(s) 1526
BsrBI CCGCTC 1 cut(s) 256
BsrFI RCCGGY 1 cut(s) 532
BssAI RCCGGY 1 cut(s) 532
BssECI CCNNGG 6 cut(s) 73, 195, 201, 456, 1033, 1389
BssMI GATC 3 cut(s) 1227, 1279, 1285
BssNI GRCGYC 2 cut(s) 6, 318
BssT1I CCWWGG 1 cut(s) 1389
Bst2UI CCWGG 5 cut(s) 106, 203, 969, 1035, 1545
Bst4CI ACNGT 1 cut(s) 173
Bst6I CTCTTC 4 cut(s) 170, 1118, 1337, 1403
BstACI GRCGYC 2 cut(s) 6, 318
BstAFI CTTAAG 1 cut(s) 1526
BstC8I GCNNGC 4 cut(s) 51, 183, 258, 1273
BstDEI CTNAG 5 cut(s) 86, 323, 1119, 1487, 1650
BstDSI CCRYGG 1 cut(s) 73
BstF5I GGATG 8 cut(s) 657, 697, 712, 829, 951, 955, 1162, 1387
BstFNI CGCG 3 cut(s) 75, 300, 1623
BstHHI GCGC 1 cut(s) 736
BstKTI GATC 3 cut(s) 1230, 1282, 1288
BstMAI GTCTC 1 cut(s) 1339
BstMBI GATC 3 cut(s) 1227, 1279, 1285
BstMCI CGRYCG 2 cut(s) 79, 220
BstMWI GCNNNNNNNGC 7 cut(s) 14, 66, 75, 191, 529, 1268, 1328
BstNI CCWGG 5 cut(s) 106, 203, 969, 1035, 1545
BstSCI CCNGG 7 cut(s) 78, 104, 195, 201, 967, 1033, 1543
BstSFI CTRYAG 1 cut(s) 1317
BstSLI GKGCMC 2 cut(s) 85, 1525
BstUI CGCG 3 cut(s) 75, 300, 1623
BstV1I GCAGC 3 cut(s) 58, 81, 1249
BstV2I GAAGAC 2 cut(s) 623, 1607
BstZI CGGCCG 1 cut(s) 76
Bsu36I CCTNAGG 2 cut(s) 86, 323
BsuRI GGCC 8 cut(s) 30, 78, 83, 162, 194, 200, 206, 523
BtgI CCRYGG 1 cut(s) 73
BtsCI GGATG 8 cut(s) 657, 697, 712, 829, 951, 955, 1162, 1387
BtsIMutI CAGTG 2 cut(s) 35, 960
BveI ACCTGC 1 cut(s) 747
Cac8I GCNNGC 4 cut(s) 51, 183, 258, 1273
CciI TCATGA 2 cut(s) 763, 1282
CfoI GCGC 1 cut(s) 736
Cfr10I RCCGGY 1 cut(s) 532
Cfr13I GGNCC 9 cut(s) 81, 82, 193, 199, 205, 306, 726, 1030, 1547
Cfr42I CCGCGG 1 cut(s) 76
CseI GACGC 2 cut(s) 14, 326
CsiI ACCWGGT 1 cut(s) 967
Csp6I GTAC 1 cut(s) 1538
CviAII CATG 5 cut(s) 142, 361, 764, 1283, 1435
CviQI GTAC 1 cut(s) 1538
DdeI CTNAG 5 cut(s) 86, 323, 1119, 1487, 1650
DpnI GATC 3 cut(s) 1229, 1281, 1287
DpnII GATC 3 cut(s) 1227, 1279, 1285
EaeI YGGCCR 1 cut(s) 76
EagI CGGCCG 1 cut(s) 76
Eam1104I CTCTTC 4 cut(s) 170, 1118, 1337, 1403
EarI CTCTTC 4 cut(s) 170, 1118, 1337, 1403
EclXI CGGCCG 1 cut(s) 76
Eco130I CCWWGG 1 cut(s) 1389
Eco147I AGGCCT 1 cut(s) 162
Eco24I GRGCYC 1 cut(s) 85
Eco47I GGWCC 4 cut(s) 306, 726, 1030, 1547
Eco52I CGGCCG 1 cut(s) 76
Eco57I CTGAAG 1 cut(s) 1287
Eco81I CCTNAGG 2 cut(s) 86, 323
EcoO109I RGGNCCY 4 cut(s) 82, 193, 1030, 1547
EcoRII CCWGG 5 cut(s) 104, 201, 967, 1033, 1543
EcoT14I CCWWGG 1 cut(s) 1389
EcoT38I GRGCYC 1 cut(s) 85
ErhI CCWWGG 1 cut(s) 1389
FaeI CATG 5 cut(s) 145, 364, 767, 1286, 1438
FaqI GGGAC 2 cut(s) 221, 1533
FatI CATG 5 cut(s) 141, 360, 763, 1282, 1434
FauI CCCGC 1 cut(s) 261
Fnu4HI GCNGC 8 cut(s) 47, 70, 73, 76, 298, 858, 1263, 1460
FokI GGATG 8 cut(s) 664, 704, 719, 836, 958, 962, 1169, 1394
FriOI GRGCYC 1 cut(s) 85
Fsp4HI GCNGC 8 cut(s) 47, 70, 73, 76, 298, 858, 1263, 1460
FspBI CTAG 2 cut(s) 366, 1512
GlaI GCGC 1 cut(s) 735
GluI GCNGC 8 cut(s) 47, 70, 73, 76, 298, 858, 1263, 1460
GsaI CCCAGC 3 cut(s) 121, 243, 996
GsuI CTGGAG 2 cut(s) 1223, 1527
HaeIII GGCC 8 cut(s) 30, 78, 83, 162, 194, 200, 206, 523
HapII CCGG 6 cut(s) 27, 79, 197, 309, 470, 533
HgaI GACGC 2 cut(s) 14, 326
HhaI GCGC 1 cut(s) 736
Hin1I GRCGYC 2 cut(s) 6, 318
Hin1II CATG 5 cut(s) 145, 364, 767, 1286, 1438
Hin6I GCGC 1 cut(s) 734
HinP1I GCGC 1 cut(s) 734
HinfI GANTC 9 cut(s) 23, 349, 357, 698, 776, 880, 925, 1109, 1603
HpaII CCGG 6 cut(s) 27, 79, 197, 309, 470, 533
HphI GGTGA 5 cut(s) 280, 547, 950, 983, 1211
Hpy166II GTNNAC 1 cut(s) 1523
Hpy188I TCNGA 5 cut(s) 22, 133, 781, 1114, 1608
Hpy188III TCNNGA 9 cut(s) 100, 154, 509, 764, 884, 1231, 1240, 1283, 1336
Hpy8I GTNNAC 1 cut(s) 1523
Hpy99I CGWCG 2 cut(s) 137, 320
HpyAV CCTTC 6 cut(s) 535, 799, 841, 1021, 1075, 1414
HpyCH4III ACNGT 1 cut(s) 173
HpyCH4V TGCA 6 cut(s) 60, 1014, 1160, 1246, 1415, 1523
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 66, 75, 191, 529, 1268, 1328
HpyF3I CTNAG 5 cut(s) 86, 323, 1119, 1487, 1650
Hsp92I GRCGYC 2 cut(s) 6, 318
Hsp92II CATG 5 cut(s) 145, 364, 767, 1286, 1438
HspAI GCGC 1 cut(s) 734
KspI CCGCGG 1 cut(s) 76
Kzo9I GATC 3 cut(s) 1227, 1279, 1285
LguI GCTCTTC 1 cut(s) 1118
LmnI GCTCC 2 cut(s) 114, 406
Lsp1109I GCAGC 3 cut(s) 58, 81, 1249
LweI GCATC 6 cut(s) 26, 62, 321, 877, 1147, 1233
MabI ACCWGGT 1 cut(s) 967
MaeI CTAG 2 cut(s) 366, 1512
MaeIII GTNAC 1 cut(s) 1189
MalI GATC 3 cut(s) 1229, 1281, 1287
MbiI CCGCTC 1 cut(s) 256
MboI GATC 3 cut(s) 1227, 1279, 1285
MhlI GDGCHC 2 cut(s) 85, 1525
MluCI AATT 4 cut(s) 419, 484, 515, 1304
MluI ACGCGT 1 cut(s) 1621
MlyI GAGTC 2 cut(s) 785, 1597
MmeI TCCRAC 5 cut(s) 156, 648, 759, 801, 822
MseI TTAA 4 cut(s) 434, 483, 1050, 1527
MspA1I CMGCKG 1 cut(s) 75
MspCI CTTAAG 1 cut(s) 1526
MspI CCGG 6 cut(s) 27, 79, 197, 309, 470, 533
MspR9I CCNGG 7 cut(s) 80, 106, 197, 203, 969, 1035, 1545
MvaI CCWGG 5 cut(s) 106, 203, 969, 1035, 1545
MvnI CGCG 3 cut(s) 75, 300, 1623
MwoI GCNNNNNNNGC 7 cut(s) 14, 66, 75, 191, 529, 1268, 1328
NciI CCSGG 2 cut(s) 80, 197
NdeII GATC 3 cut(s) 1227, 1279, 1285
NlaIII CATG 5 cut(s) 145, 364, 767, 1286, 1438
NlaIV GGNNCC 7 cut(s) 83, 110, 195, 727, 1032, 1387, 1549
NmeAIII GCCGAG 2 cut(s) 254, 481
PagI TCATGA 2 cut(s) 763, 1282
PceI AGGCCT 1 cut(s) 162
PciSI GCTCTTC 1 cut(s) 1118
PfeI GAWTC 7 cut(s) 23, 349, 357, 698, 880, 925, 1109
PkrI GCNGC 8 cut(s) 48, 71, 74, 77, 299, 859, 1264, 1461
PleI GAGTC 2 cut(s) 784, 1597
PpsI GAGTC 2 cut(s) 784, 1597
PpuMI RGGWCCY 2 cut(s) 1030, 1547
Psp5II RGGWCCY 2 cut(s) 1030, 1547
Psp6I CCWGG 5 cut(s) 104, 201, 967, 1033, 1543
PspFI CCCAGC 3 cut(s) 117, 239, 992
PspGI CCWGG 5 cut(s) 104, 201, 967, 1033, 1543
PspN4I GGNNCC 7 cut(s) 83, 110, 195, 727, 1032, 1387, 1549
PspOMI GGGCCC 1 cut(s) 81
PspPI GGNCC 9 cut(s) 81, 82, 193, 199, 205, 306, 726, 1030, 1547
PspPPI RGGWCCY 2 cut(s) 1030, 1547
RsaI GTAC 1 cut(s) 1539
RsaNI GTAC 1 cut(s) 1538
SacII CCGCGG 1 cut(s) 76
SapI GCTCTTC 1 cut(s) 1118
SaqAI TTAA 4 cut(s) 434, 483, 1050, 1527
SatI GCNGC 8 cut(s) 47, 70, 73, 76, 298, 858, 1263, 1460
Sau3AI GATC 3 cut(s) 1227, 1279, 1285
Sau96I GGNCC 9 cut(s) 81, 82, 193, 199, 205, 306, 726, 1030, 1547
SchI GAGTC 2 cut(s) 785, 1597
ScrFI CCNGG 7 cut(s) 80, 106, 197, 203, 969, 1035, 1545
SduI GDGCHC 2 cut(s) 85, 1525
SexAI ACCWGGT 1 cut(s) 967
SfaNI GCATC 6 cut(s) 26, 62, 321, 877, 1147, 1233
SfcI CTRYAG 1 cut(s) 1317
Sfr303I CCGCGG 1 cut(s) 76
SgrBI CCGCGG 1 cut(s) 76
SinI GGWCC 4 cut(s) 306, 726, 1030, 1547
SmlI CTYRAG 3 cut(s) 98, 509, 1526
SmoI CTYRAG 3 cut(s) 98, 509, 1526
Sse9I AATT 4 cut(s) 419, 484, 515, 1304
SseBI AGGCCT 1 cut(s) 162
SsiI CCGC 7 cut(s) 73, 75, 220, 254, 298, 857, 1460
SspMI CTAG 2 cut(s) 366, 1512
StuI AGGCCT 1 cut(s) 162
StyD4I CCNGG 7 cut(s) 78, 104, 195, 201, 967, 1033, 1543
StyI CCWWGG 1 cut(s) 1389
TaaI ACNGT 1 cut(s) 173
TaqI TCGA 6 cut(s) 216, 264, 315, 752, 1232, 1337
TasI AATT 4 cut(s) 419, 484, 515, 1304
TauI GCSGC 5 cut(s) 75, 78, 300, 860, 1462
TfiI GAWTC 7 cut(s) 23, 349, 357, 698, 880, 925, 1109
Tru1I TTAA 4 cut(s) 434, 483, 1050, 1527
Tru9I TTAA 4 cut(s) 434, 483, 1050, 1527
TscAI CASTG 2 cut(s) 42, 967
TseI GCWGC 3 cut(s) 46, 69, 1262
TspDTI ATGAA 7 cut(s) 158, 349, 752, 780, 1197, 1383, 1451
TspGWI ACGGA 2 cut(s) 718, 1148
TspRI CASTG 2 cut(s) 42, 967
Vha464I CTTAAG 1 cut(s) 1526
VneI GTGCAC 1 cut(s) 1521
VpaK11BI GGWCC 4 cut(s) 306, 726, 1030, 1547
XspI CTAG 2 cut(s) 366, 1512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.