Belongs to the class-I aminoacyl-tRNA synthetase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G49030 AT5G49030 AT5G49030 |
| fragaria_vesca | FvH4_4g18060 FvH4_4g18060 FvH4_4g18060 FvH4_4g18060 FvH4_4g18060 FvH4_4g18060 |
| malus_domestica | MD13G1168400.v1.1 MD16G1168800.v1.1 |
| prunus_persica | Prupe.1G136500_v2.0.a1 Prupe.1G136500_v2.0.a1 |
| pyrus_communis | pycom13g14400 pycom16g14210 |
| rosa_chinensis | RchiOBHm_Chr4g0422271 |
| rosa_laevigata | RLG00000007623 |
| rosa_multiflora | Rmu_sc0013245.1_g000018 |
| rosa_roxburghii | Rroxscaffold_5G00364380 |
| rosa_rugosa | Rorug04G0179100 |
| rosa_samantha | Rh4AG238300 Rh4BG241400 Rh4CG253300 Rh4DG237000 |
| rosa_wichuraiana | Rw4G020620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 537, 555 |
| AarI | CACCTGC | 1 cut(s) | 1129 |
| Acc36I | ACCTGC | 1 cut(s) | 1129 |
| AccI | GTMKAC | 2 cut(s) | 2202, 2928 |
| AccII | CGCG | 3 cut(s) | 1049, 1759, 3135 |
| AccIII | TCCGGA | 1 cut(s) | 904 |
| AciI | CCGC | 8 cut(s) | 42, 884, 936, 1047, 1049, 1759, 2587, 3217 |
| AclI | AACGTT | 1 cut(s) | 2196 |
| AclWI | GGATC | 3 cut(s) | 764, 1911, 2067 |
| AcoI | YGGCCR | 2 cut(s) | 1005, 2780 |
| AcsI | RAATTY | 8 cut(s) | 4, 167, 355, 1475, 2467, 2560, 2759, 2841 |
| AcuI | CTGAAG | 5 cut(s) | 365, 951, 1176, 1250, 2964 |
| AfaI | GTAC | 8 cut(s) | 612, 874, 1494, 1889, 2045, 2154, 2732, 3205 |
| AfeI | AGCGCT | 1 cut(s) | 3261 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 886, 968, 1382, 1810, 3034, 3083, 3182 |
| AflII | CTTAAG | 2 cut(s) | 1409, 3146 |
| AjnI | CCWGG | 4 cut(s) | 571, 1025, 1375, 3027 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2858, 2890 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1958, 1990, 2244, 2276 |
| Alw21I | GWGCWC | 3 cut(s) | 116, 958, 2317 |
| Alw26I | GTCTC | 2 cut(s) | 2033, 3135 |
| Alw44I | GTGCAC | 1 cut(s) | 954 |
| AlwI | GGATC | 3 cut(s) | 764, 1911, 2067 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 122, 3219 |
| Ama87I | CYCGRG | 1 cut(s) | 246 |
| Aor13HI | TCCGGA | 1 cut(s) | 904 |
| Aor51HI | AGCGCT | 1 cut(s) | 3261 |
| AoxI | GGCC | 7 cut(s) | 18, 127, 1005, 1225, 1405, 2780, 3142 |
| ApaLI | GTGCAC | 1 cut(s) | 954 |
| ApoI | RAATTY | 8 cut(s) | 4, 167, 355, 1475, 2467, 2560, 2759, 2841 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 203, 235 |
| AseI | ATTAAT | 1 cut(s) | 528 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 151, 1175, 1650 |
| AspLEI | GCGC | 2 cut(s) | 3137, 3262 |
| AspS9I | GGNCC | 7 cut(s) | 251, 461, 814, 1225, 1363, 2856, 3142 |
| AsuHPI | GGTGA | 4 cut(s) | 491, 1110, 2875, 3165 |
| AvaI | CYCGRG | 1 cut(s) | 246 |
| AvaII | GGWCC | 5 cut(s) | 251, 461, 814, 1363, 2856 |
| AxyI | CCTNAGG | 1 cut(s) | 3177 |
| BaeGI | GKGCMC | 2 cut(s) | 958, 2606 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1559, 1592, 3187, 3220 |
| BalI | TGGCCA | 2 cut(s) | 1007, 2782 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1890, 1922 |
| BauI | CACGAG | 2 cut(s) | 366, 2886 |
| BbsI | GAAGAC | 2 cut(s) | 144, 2970 |
| Bbv12I | GWGCWC | 3 cut(s) | 116, 958, 2317 |
| BbvCI | CCTCAGC | 3 cut(s) | 2700, 2852, 3138 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 203, 237 |
| BciT130I | CCWGG | 4 cut(s) | 573, 1027, 1377, 3029 |
| BciVI | GTATCC | 3 cut(s) | 912, 999, 1587 |
| BclI | TGATCA | 3 cut(s) | 625, 1840, 2440 |
| BcoDI | GTCTC | 2 cut(s) | 2033, 3135 |
| BfaI | CTAG | 5 cut(s) | 1734, 1914, 2619, 2910, 2954 |
| BfmI | CTRYAG | 5 cut(s) | 832, 1437, 1998, 2034, 3249 |
| BfoI | RGCGCY | 1 cut(s) | 3263 |
| BfrI | CTTAAG | 2 cut(s) | 1409, 3146 |
| BfuAI | ACCTGC | 1 cut(s) | 1129 |
| BfuI | GTATCC | 3 cut(s) | 912, 999, 1587 |
| BglII | AGATCT | 4 cut(s) | 242, 643, 1195, 1264 |
| BmcAI | AGTACT | 1 cut(s) | 612 |
| Bme1390I | CCNGG | 4 cut(s) | 573, 1027, 1377, 3029 |
| Bme18I | GGWCC | 5 cut(s) | 251, 461, 814, 1363, 2856 |
| BmeT110I | CYCGRG | 1 cut(s) | 246 |
| BmgT120I | GGNCC | 7 cut(s) | 251, 461, 814, 1225, 1363, 2856, 3142 |
| BmiI | GGNNCC | 5 cut(s) | 1226, 1815, 2078, 2121, 3187 |
| BmrFI | CCNGG | 4 cut(s) | 573, 1027, 1377, 3029 |
| BmrI | ACTGGG | 1 cut(s) | 3070 |
| BmuI | ACTGGG | 1 cut(s) | 3070 |
| BpiI | GAAGAC | 2 cut(s) | 144, 2970 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 943, 975, 2170, 2202 |
| BpmI | CTGGAG | 5 cut(s) | 766, 877, 1297, 1609, 1787 |
| Bpu10I | CCTNAGC | 5 cut(s) | 375, 1701, 2700, 2852, 3138 |
| BpuEI | CTTGAG | 6 cut(s) | 7, 264, 1142, 1289, 2301, 2867 |
| Bsa29I | ATCGAT | 1 cut(s) | 2286 |
| BsaAI | YACGTR | 1 cut(s) | 872 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2064 |
| BsaJI | CCNNGG | 8 cut(s) | 15, 142, 586, 1025, 1047, 2859, 2922, 3027 |
| BsaWI | WCCGGW | 3 cut(s) | 904, 1786, 3009 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1006, 1036, 2244, 2274 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 886, 968, 1382, 1810, 3034, 3083, 3182 |
| Bse118I | RCCGGY | 1 cut(s) | 1737 |
| Bse21I | CCTNAGG | 1 cut(s) | 3177 |
| Bse3DI | GCAATG | 3 cut(s) | 1634, 1687, 1731 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2064 |
| BseAI | TCCGGA | 1 cut(s) | 904 |
| BseBI | CCWGG | 4 cut(s) | 573, 1027, 1377, 3029 |
| BseCI | ATCGAT | 1 cut(s) | 2286 |
| BseDI | CCNNGG | 8 cut(s) | 15, 142, 586, 1025, 1047, 2859, 2922, 3027 |
| BseJI | GATNNNNATC | 1 cut(s) | 2064 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 886, 968, 1382, 1810, 3034, 3083, 3182 |
| BseMI | GCAATG | 3 cut(s) | 1634, 1687, 1731 |
| BseMII | CTCAG | 9 cut(s) | 366, 803, 1614, 1995, 2201, 2691, 2843, 3129, 3191 |
| BseRI | GAGGAG | 1 cut(s) | 230 |
| BseSI | GKGCMC | 2 cut(s) | 958, 2606 |
| Bsh1236I | CGCG | 3 cut(s) | 1049, 1759, 3135 |
| Bsh1285I | CGRYCG | 1 cut(s) | 321 |
| BshFI | GGCC | 7 cut(s) | 20, 129, 1007, 1227, 1407, 2782, 3144 |
| BshVI | ATCGAT | 1 cut(s) | 2286 |
| BsiEI | CGRYCG | 1 cut(s) | 321 |
| BsiHKAI | GWGCWC | 3 cut(s) | 116, 958, 2317 |
| BsiHKCI | CYCGRG | 1 cut(s) | 246 |
| BsiSI | CCGG | 5 cut(s) | 905, 1125, 1738, 1787, 3010 |
| BslFI | GGGAC | 1 cut(s) | 846 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 886, 968, 1382, 1810, 3034, 3083, 3182 |
| BsmAI | GTCTC | 2 cut(s) | 2033, 3135 |
| BsmFI | GGGAC | 1 cut(s) | 846 |
| BsmI | GAATGC | 2 cut(s) | 1066, 2495 |
| BsnI | GGCC | 7 cut(s) | 20, 129, 1007, 1227, 1407, 2782, 3144 |
| BsoBI | CYCGRG | 1 cut(s) | 246 |
| Bsp1286I | GDGCHC | 4 cut(s) | 116, 958, 2317, 2606 |
| Bsp13I | TCCGGA | 1 cut(s) | 904 |
| Bsp19I | CCATGG | 1 cut(s) | 586 |
| BspACI | CCGC | 8 cut(s) | 42, 884, 936, 1047, 1049, 1759, 2587, 3217 |
| BspANI | GGCC | 7 cut(s) | 20, 129, 1007, 1227, 1407, 2782, 3144 |
| BspCNI | CTCAG | 9 cut(s) | 367, 802, 1615, 1994, 2200, 2692, 2844, 3130, 3190 |
| BspDI | ATCGAT | 1 cut(s) | 2286 |
| BspEI | TCCGGA | 1 cut(s) | 904 |
| BspFNI | CGCG | 3 cut(s) | 1049, 1759, 3135 |
| BspHI | TCATGA | 1 cut(s) | 454 |
| BspLI | GGNNCC | 5 cut(s) | 1226, 1815, 2078, 2121, 3187 |
| BspMAI | CTGCAG | 2 cut(s) | 2002, 2038 |
| BspMI | ACCTGC | 1 cut(s) | 1129 |
| BspPI | GGATC | 3 cut(s) | 764, 1911, 2067 |
| BspQI | GCTCTTC | 1 cut(s) | 1993 |
| BspTI | CTTAAG | 2 cut(s) | 1409, 3146 |
| BsrDI | GCAATG | 3 cut(s) | 1634, 1687, 1731 |
| BsrFI | RCCGGY | 1 cut(s) | 1737 |
| BssAI | RCCGGY | 1 cut(s) | 1737 |
| BssECI | CCNNGG | 8 cut(s) | 15, 142, 586, 1025, 1047, 2859, 2922, 3027 |
| BssSI | CACGAG | 2 cut(s) | 366, 2886 |
| BssT1I | CCWWGG | 3 cut(s) | 15, 586, 2922 |
| Bst2BI | CACGAG | 2 cut(s) | 366, 2886 |
| Bst2UI | CCWGG | 4 cut(s) | 573, 1027, 1377, 3029 |
| Bst4CI | ACNGT | 6 cut(s) | 319, 697, 2215, 2638, 3203, 3239 |
| Bst6I | CTCTTC | 1 cut(s) | 1993 |
| BstAFI | CTTAAG | 2 cut(s) | 1409, 3146 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1061, 2490, 3219 |
| BstBAI | YACGTR | 1 cut(s) | 872 |
| BstC8I | GCNNGC | 4 cut(s) | 1136, 2400, 2448, 2784 |
| BstDSI | CCRYGG | 2 cut(s) | 586, 1047 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 884 |
| BstFNI | CGCG | 3 cut(s) | 1049, 1759, 3135 |
| BstH2I | RGCGCY | 1 cut(s) | 3263 |
| BstHHI | GCGC | 2 cut(s) | 3137, 3262 |
| BstMAI | GTCTC | 2 cut(s) | 2033, 3135 |
| BstMCI | CGRYCG | 1 cut(s) | 321 |
| BstNI | CCWGG | 4 cut(s) | 573, 1027, 1377, 3029 |
| BstNSI | RCATGY | 2 cut(s) | 500, 2402 |
| BstSCI | CCNGG | 4 cut(s) | 571, 1025, 1375, 3027 |
| BstSFI | CTRYAG | 5 cut(s) | 832, 1437, 1998, 2034, 3249 |
| BstSLI | GKGCMC | 2 cut(s) | 958, 2606 |
| BstUI | CGCG | 3 cut(s) | 1049, 1759, 3135 |
| BstV2I | GAAGAC | 2 cut(s) | 144, 2970 |
| BstX2I | RGATCY | 5 cut(s) | 242, 643, 1195, 1264, 1903 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 855, 1587, 2243 |
| BstYI | RGATCY | 5 cut(s) | 242, 643, 1195, 1264, 1903 |
| Bsu15I | ATCGAT | 1 cut(s) | 2286 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3177 |
| BsuI | GTATCC | 3 cut(s) | 912, 999, 1587 |
| BsuRI | GGCC | 7 cut(s) | 20, 129, 1007, 1227, 1407, 2782, 3144 |
| BsuTUI | ATCGAT | 1 cut(s) | 2286 |
| BtgI | CCRYGG | 2 cut(s) | 586, 1047 |
| BtgZI | GCGATG | 1 cut(s) | 1890 |
| BtsI | GCAGTG | 1 cut(s) | 1062 |
| BtsIMutI | CAGTG | 7 cut(s) | 214, 853, 1062, 1401, 1647, 2137, 2733 |
| BveI | ACCTGC | 1 cut(s) | 1129 |
| Cac8I | GCNNGC | 4 cut(s) | 1136, 2400, 2448, 2784 |
| CaiI | CAGNNNCTG | 2 cut(s) | 122, 3219 |
| CciI | TCATGA | 1 cut(s) | 454 |
| CfoI | GCGC | 2 cut(s) | 3137, 3262 |
| Cfr10I | RCCGGY | 1 cut(s) | 1737 |
| Cfr13I | GGNCC | 7 cut(s) | 251, 461, 814, 1225, 1363, 2856, 3142 |
| Cfr42I | CCGCGG | 1 cut(s) | 1050 |
| ClaI | ATCGAT | 1 cut(s) | 2286 |
| CseI | GACGC | 1 cut(s) | 2255 |
| Csp6I | GTAC | 8 cut(s) | 611, 873, 1493, 1888, 2044, 2153, 2731, 3204 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 34, 69 |
| CviQI | GTAC | 8 cut(s) | 611, 873, 1493, 1888, 2044, 2153, 2731, 3204 |
| DraI | TTTAAA | 2 cut(s) | 516, 2172 |
| EaeI | YGGCCR | 2 cut(s) | 1005, 2780 |
| Eam1104I | CTCTTC | 1 cut(s) | 1993 |
| EarI | CTCTTC | 1 cut(s) | 1993 |
| Eco130I | CCWWGG | 3 cut(s) | 15, 586, 2922 |
| Eco47I | GGWCC | 5 cut(s) | 251, 461, 814, 1363, 2856 |
| Eco47III | AGCGCT | 1 cut(s) | 3261 |
| Eco57I | CTGAAG | 5 cut(s) | 365, 951, 1176, 1250, 2964 |
| Eco81I | CCTNAGG | 1 cut(s) | 3177 |
| Eco88I | CYCGRG | 1 cut(s) | 246 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 884 |
| EcoO109I | RGGNCCY | 3 cut(s) | 251, 1225, 3142 |
| EcoRI | GAATTC | 2 cut(s) | 167, 355 |
| EcoRII | CCWGG | 4 cut(s) | 571, 1025, 1375, 3027 |
| EcoT14I | CCWWGG | 3 cut(s) | 15, 586, 2922 |
| EcoT22I | ATGCAT | 1 cut(s) | 1882 |
| ErhI | CCWWGG | 3 cut(s) | 15, 586, 2922 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 139, 171, 1085, 1117 |
| FaqI | GGGAC | 1 cut(s) | 846 |
| FauNDI | CATATG | 1 cut(s) | 1582 |
| FbaI | TGATCA | 3 cut(s) | 625, 1840, 2440 |
| FblI | GTMKAC | 2 cut(s) | 2202, 2928 |
| FspBI | CTAG | 5 cut(s) | 1734, 1914, 2619, 2910, 2954 |
| GlaI | GCGC | 2 cut(s) | 3136, 3261 |
| GsuI | CTGGAG | 5 cut(s) | 766, 877, 1297, 1609, 1787 |
| HaeII | RGCGCY | 1 cut(s) | 3263 |
| HaeIII | GGCC | 7 cut(s) | 20, 129, 1007, 1227, 1407, 2782, 3144 |
| HapII | CCGG | 5 cut(s) | 905, 1125, 1738, 1787, 3010 |
| HgaI | GACGC | 1 cut(s) | 2255 |
| HhaI | GCGC | 2 cut(s) | 3137, 3262 |
| Hin6I | GCGC | 2 cut(s) | 3135, 3260 |
| HinP1I | GCGC | 2 cut(s) | 3135, 3260 |
| HincII | GTYRAC | 4 cut(s) | 2094, 2551, 3235, 3242 |
| HindII | GTYRAC | 4 cut(s) | 2094, 2551, 3235, 3242 |
| HindIII | AAGCTT | 4 cut(s) | 442, 539, 1067, 1232 |
| HinfI | GANTC | 9 cut(s) | 713, 763, 859, 1346, 1559, 1693, 1979, 2771, 2945 |
| HpaI | GTTAAC | 1 cut(s) | 2094 |
| HpaII | CCGG | 5 cut(s) | 905, 1125, 1738, 1787, 3010 |
| HphI | GGTGA | 4 cut(s) | 491, 1110, 2875, 3165 |
| Hpy99I | CGWCG | 1 cut(s) | 2303 |
| HpyCH4III | ACNGT | 6 cut(s) | 319, 697, 2215, 2638, 3203, 3239 |
| HpyCH4IV | ACGT | 4 cut(s) | 871, 2196, 2301, 2595 |
| HpySE526I | ACGT | 4 cut(s) | 871, 2196, 2301, 2595 |
| HspAI | GCGC | 2 cut(s) | 3135, 3260 |
| Kpn2I | TCCGGA | 1 cut(s) | 904 |
| Ksp22I | TGATCA | 3 cut(s) | 625, 1840, 2440 |
| KspAI | GTTAAC | 1 cut(s) | 2094 |
| KspI | CCGCGG | 1 cut(s) | 1050 |
| LguI | GCTCTTC | 1 cut(s) | 1993 |
| LmnI | GCTCC | 7 cut(s) | 111, 924, 1378, 2125, 2252, 2683, 2791 |
| MaeI | CTAG | 5 cut(s) | 1734, 1914, 2619, 2910, 2954 |
| MaeII | ACGT | 4 cut(s) | 871, 2196, 2301, 2595 |
| MaeIII | GTNAC | 4 cut(s) | 209, 1399, 1542, 2192 |
| MfeI | CAATTG | 2 cut(s) | 597, 1674 |
| MflI | RGATCY | 5 cut(s) | 242, 643, 1195, 1264, 1903 |
| MhlI | GDGCHC | 4 cut(s) | 116, 958, 2317, 2606 |
| MlsI | TGGCCA | 2 cut(s) | 1007, 2782 |
| MluNI | TGGCCA | 2 cut(s) | 1007, 2782 |
| MlyI | GAGTC | 4 cut(s) | 757, 868, 1355, 1973 |
| MmeI | TCCRAC | 2 cut(s) | 986, 2856 |
| Mox20I | TGGCCA | 2 cut(s) | 1007, 2782 |
| Mph1103I | ATGCAT | 1 cut(s) | 1882 |
| MroI | TCCGGA | 1 cut(s) | 904 |
| MroXI | GAANNNNTTC | 3 cut(s) | 151, 1175, 1650 |
| MscI | TGGCCA | 2 cut(s) | 1007, 2782 |
| MslI | CAYNNNNRTG | 3 cut(s) | 207, 1530, 2403 |
| Msp20I | TGGCCA | 2 cut(s) | 1007, 2782 |
| MspA1I | CMGCKG | 3 cut(s) | 1049, 3219, 3254 |
| MspCI | CTTAAG | 2 cut(s) | 1409, 3146 |
| MspI | CCGG | 5 cut(s) | 905, 1125, 1738, 1787, 3010 |
| MspR9I | CCNGG | 4 cut(s) | 573, 1027, 1377, 3029 |
| MunI | CAATTG | 2 cut(s) | 597, 1674 |
| Mva1269I | GAATGC | 2 cut(s) | 1066, 2495 |
| MvaI | CCWGG | 4 cut(s) | 573, 1027, 1377, 3029 |
| MvnI | CGCG | 3 cut(s) | 1049, 1759, 3135 |
| NcoI | CCATGG | 1 cut(s) | 586 |
| NdeI | CATATG | 1 cut(s) | 1582 |
| NlaIV | GGNNCC | 5 cut(s) | 1226, 1815, 2078, 2121, 3187 |
| NmuCI | GTSAC | 3 cut(s) | 209, 1399, 1542 |
| NsiI | ATGCAT | 1 cut(s) | 1882 |
| NspI | RCATGY | 2 cut(s) | 500, 2402 |
| PaeI | GCATGC | 1 cut(s) | 2402 |
| PaeR7I | CTCGAG | 1 cut(s) | 246 |
| PagI | TCATGA | 1 cut(s) | 454 |
| PaqCI | CACCTGC | 1 cut(s) | 1129 |
| PciSI | GCTCTTC | 1 cut(s) | 1993 |
| PctI | GAATGC | 2 cut(s) | 1066, 2495 |
| PdmI | GAANNNNTTC | 3 cut(s) | 151, 1175, 1650 |
| PfeI | GAWTC | 5 cut(s) | 713, 1559, 1693, 2771, 2945 |
| PflFI | GACNNNGTC | 1 cut(s) | 1383 |
| PfoI | TCCNGGA | 1 cut(s) | 1375 |
| PleI | GAGTC | 4 cut(s) | 757, 867, 1354, 1973 |
| PpsI | GAGTC | 4 cut(s) | 757, 867, 1354, 1973 |
| Ppu21I | YACGTR | 1 cut(s) | 872 |
| PpuMI | RGGWCCY | 1 cut(s) | 251 |
| PshBI | ATTAAT | 1 cut(s) | 528 |
| PsiI | TTATAA | 2 cut(s) | 537, 555 |
| Psp1406I | AACGTT | 1 cut(s) | 2196 |
| Psp5II | RGGWCCY | 1 cut(s) | 251 |
| Psp6I | CCWGG | 4 cut(s) | 571, 1025, 1375, 3027 |
| PspGI | CCWGG | 4 cut(s) | 571, 1025, 1375, 3027 |
| PspN4I | GGNNCC | 5 cut(s) | 1226, 1815, 2078, 2121, 3187 |
| PspPI | GGNCC | 7 cut(s) | 251, 461, 814, 1225, 1363, 2856, 3142 |
| PspPPI | RGGWCCY | 1 cut(s) | 251 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 85, 117 |
| PstI | CTGCAG | 2 cut(s) | 2002, 2038 |
| PstNI | CAGNNNCTG | 2 cut(s) | 122, 3219 |
| PsuI | RGATCY | 5 cut(s) | 242, 643, 1195, 1264, 1903 |
| PsyI | GACNNNGTC | 1 cut(s) | 1383 |
| PvuII | CAGCTG | 1 cut(s) | 3254 |
| RsaI | GTAC | 8 cut(s) | 612, 874, 1494, 1889, 2045, 2154, 2732, 3205 |
| RsaNI | GTAC | 8 cut(s) | 611, 873, 1493, 1888, 2044, 2153, 2731, 3204 |
| RseI | CAYNNNNRTG | 3 cut(s) | 207, 1530, 2403 |
| SacII | CCGCGG | 1 cut(s) | 1050 |
| SapI | GCTCTTC | 1 cut(s) | 1993 |
| Sau96I | GGNCC | 7 cut(s) | 251, 461, 814, 1225, 1363, 2856, 3142 |
| ScaI | AGTACT | 1 cut(s) | 612 |
| SchI | GAGTC | 4 cut(s) | 757, 868, 1355, 1973 |
| ScrFI | CCNGG | 4 cut(s) | 573, 1027, 1377, 3029 |
| SduI | GDGCHC | 4 cut(s) | 116, 958, 2317, 2606 |
| SfcI | CTRYAG | 5 cut(s) | 832, 1437, 1998, 2034, 3249 |
| Sfr274I | CTCGAG | 1 cut(s) | 246 |
| Sfr303I | CCGCGG | 1 cut(s) | 1050 |
| SgrBI | CCGCGG | 1 cut(s) | 1050 |
| SinI | GGWCC | 5 cut(s) | 251, 461, 814, 1363, 2856 |
| SlaI | CTCGAG | 1 cut(s) | 246 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 207, 1530, 2403 |
| SmlI | CTYRAG | 9 cut(s) | 22, 246, 279, 1157, 1268, 1409, 2316, 2846, 3146 |
| SmoI | CTYRAG | 9 cut(s) | 22, 246, 279, 1157, 1268, 1409, 2316, 2846, 3146 |
| SphI | GCATGC | 1 cut(s) | 2402 |
| SsiI | CCGC | 8 cut(s) | 42, 884, 936, 1047, 1049, 1759, 2587, 3217 |
| SspI | AATATT | 1 cut(s) | 1510 |
| SspMI | CTAG | 5 cut(s) | 1734, 1914, 2619, 2910, 2954 |
| StyD4I | CCNGG | 4 cut(s) | 571, 1025, 1375, 3027 |
| StyI | CCWWGG | 3 cut(s) | 15, 586, 2922 |
| TaaI | ACNGT | 6 cut(s) | 319, 697, 2215, 2638, 3203, 3239 |
| TaiI | ACGT | 4 cut(s) | 874, 2199, 2304, 2598 |
| TaqI | TCGA | 6 cut(s) | 247, 321, 637, 1977, 2286, 2960 |
| TaqII | GACCGA | 1 cut(s) | 2873 |
| TatI | WGTACW | 4 cut(s) | 610, 1492, 2152, 2730 |
| TauI | GCSGC | 5 cut(s) | 44, 938, 1049, 1762, 3219 |
| TfiI | GAWTC | 5 cut(s) | 713, 1559, 1693, 2771, 2945 |
| TscAI | CASTG | 7 cut(s) | 214, 860, 1062, 1408, 1647, 2137, 2740 |
| TseFI | GTSAC | 3 cut(s) | 209, 1399, 1542 |
| Tsp45I | GTSAC | 3 cut(s) | 209, 1399, 1542 |
| TspGWI | ACGGA | 3 cut(s) | 1358, 2315, 2808 |
| TspRI | CASTG | 7 cut(s) | 214, 860, 1062, 1408, 1647, 2137, 2740 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1383 |
| Vha464I | CTTAAG | 2 cut(s) | 1409, 3146 |
| VneI | GTGCAC | 1 cut(s) | 954 |
| VpaK11BI | GGWCC | 5 cut(s) | 251, 461, 814, 1363, 2856 |
| VspI | ATTAAT | 1 cut(s) | 528 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 884 |
| XapI | RAATTY | 8 cut(s) | 4, 167, 355, 1475, 2467, 2560, 2759, 2841 |
| XceI | RCATGY | 2 cut(s) | 500, 2402 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1373 |
| XhoI | CTCGAG | 1 cut(s) | 246 |
| XmiI | GTMKAC | 2 cut(s) | 2202, 2928 |
| XmnI | GAANNNNTTC | 3 cut(s) | 151, 1175, 1650 |
| XspI | CTAG | 5 cut(s) | 1734, 1914, 2619, 2910, 2954 |
| ZrmI | AGTACT | 1 cut(s) | 612 |
| Zsp2I | ATGCAT | 1 cut(s) | 1882 |