Belongs to the class-I aminoacyl-tRNA synthetase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G49030 AT5G49030 AT5G49030 |
| fragaria_vesca | FvH4_4g18060 FvH4_4g18060 FvH4_4g18060 FvH4_4g18060 FvH4_4g18060 FvH4_4g18060 |
| malus_domestica | MD13G1168400.v1.1 MD16G1168800.v1.1 |
| prunus_persica | Prupe.1G136500_v2.0.a1 Prupe.1G136500_v2.0.a1 |
| pyrus_communis | pycom13g14400 pycom16g14210 |
| rosa_chinensis | RchiOBHm_Chr4g0422271 |
| rosa_laevigata | RLG00000007623 |
| rosa_multiflora | Rmu_sc0013245.1_g000018 |
| rosa_roxburghii | Rroxscaffold_5G00364380 |
| rosa_rugosa | Rorug04G0179100 |
| rosa_samantha | Rh4AG238300 Rh4BG241400 Rh4CG253300 Rh4DG237000 |
| rosa_wichuraiana | Rw4G020620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2157, 2175 |
| AarI | CACCTGC | 1 cut(s) | 2749 |
| Acc36I | ACCTGC | 2 cut(s) | 2749, 2889 |
| Acc65I | GGTACC | 1 cut(s) | 1233 |
| AccB1I | GGYRCC | 3 cut(s) | 557, 871, 1233 |
| AccBSI | CCGCTC | 3 cut(s) | 149, 1208, 3360 |
| AccI | GTMKAC | 2 cut(s) | 3822, 4548 |
| AccII | CGCG | 3 cut(s) | 2669, 3379, 4755 |
| AccIII | TCCGGA | 2 cut(s) | 2524, 4813 |
| AclI | AACGTT | 1 cut(s) | 3816 |
| AclWI | GGATC | 7 cut(s) | 979, 1013, 1532, 2271, 2384, 3531, 3687 |
| AcoI | YGGCCR | 7 cut(s) | 75, 144, 535, 1677, 2113, 2625, 4400 |
| AcuI | CTGAAG | 7 cut(s) | 240, 809, 1048, 1920, 1985, 2796, 2870 |
| AcvI | CACGTG | 1 cut(s) | 1054 |
| AflII | CTTAAG | 1 cut(s) | 3029 |
| AflIII | ACRYGT | 1 cut(s) | 465 |
| AjnI | CCWGG | 6 cut(s) | 847, 1210, 2191, 2645, 2995, 4647 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 413, 445 |
| AleI | CACNNNNGTG | 1 cut(s) | 1136 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 3578, 3610, 3864, 3896 |
| Alw21I | GWGCWC | 4 cut(s) | 51, 1184, 2578, 3937 |
| Alw26I | GTCTC | 9 cut(s) | 40, 788, 1053, 1869, 2725, 3446, 3653, 3893, 4755 |
| Alw44I | GTGCAC | 1 cut(s) | 2574 |
| AlwI | GGATC | 7 cut(s) | 979, 1013, 1532, 2271, 2384, 3531, 3687 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1748, 2510, 2996, 4839 |
| Ama87I | CYCGRG | 1 cut(s) | 1866 |
| Aor13HI | TCCGGA | 2 cut(s) | 2524, 4813 |
| ApaI | GGGCCC | 2 cut(s) | 197, 1370 |
| ApaLI | GTGCAC | 1 cut(s) | 2574 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1847, 1879 |
| AseI | ATTAAT | 2 cut(s) | 777, 2148 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1777, 1790, 2795, 3270 |
| Asp718I | GGTACC | 1 cut(s) | 1233 |
| AspLEI | GCGC | 3 cut(s) | 19, 95, 4757 |
| AsuC2I | CCSGG | 2 cut(s) | 100, 1371 |
| AsuHPI | GGTGA | 7 cut(s) | 1209, 1554, 2111, 2730, 3410, 4495, 4785 |
| AsuII | TTCGAA | 3 cut(s) | 11, 981, 4409 |
| AvaI | CYCGRG | 1 cut(s) | 1866 |
| AvaII | GGWCC | 5 cut(s) | 1871, 2081, 2434, 2983, 4816 |
| AxyI | CCTNAGG | 1 cut(s) | 4797 |
| BaeGI | GKGCMC | 6 cut(s) | 197, 767, 1370, 1742, 2578, 4226 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3179, 3212 |
| BalI | TGGCCA | 3 cut(s) | 1679, 2627, 4402 |
| BanI | GGYRCC | 3 cut(s) | 557, 871, 1233 |
| BanII | GRGCYC | 4 cut(s) | 51, 197, 1370, 1431 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3510, 3542 |
| BauI | CACGAG | 1 cut(s) | 1986 |
| BbrPI | CACGTG | 1 cut(s) | 1054 |
| BbsI | GAAGAC | 3 cut(s) | 51, 332, 1770 |
| Bbv12I | GWGCWC | 4 cut(s) | 51, 1184, 2578, 3937 |
| BbvCI | CCTCAGC | 2 cut(s) | 4320, 4758 |
| BceAI | ACGGC | 2 cut(s) | 62, 522 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1703, 1737 |
| BciT130I | CCWGG | 6 cut(s) | 849, 1212, 2193, 2647, 2997, 4649 |
| BciVI | GTATCC | 4 cut(s) | 855, 2532, 2619, 3207 |
| BclI | TGATCA | 4 cut(s) | 2245, 3168, 3460, 4060 |
| BcnI | CCSGG | 2 cut(s) | 100, 1371 |
| BcoDI | GTCTC | 9 cut(s) | 40, 788, 1053, 1869, 2725, 3446, 3653, 3893, 4755 |
| BfaI | CTAG | 8 cut(s) | 84, 1134, 1614, 2831, 3354, 3534, 4239, 4530 |
| BfmI | CTRYAG | 8 cut(s) | 1125, 1435, 2452, 2896, 3618, 3654, 4599, 4869 |
| BfoI | RGCGCY | 1 cut(s) | 96 |
| BfrI | CTTAAG | 1 cut(s) | 3029 |
| BfuAI | ACCTGC | 2 cut(s) | 2749, 2889 |
| BfuI | GTATCC | 4 cut(s) | 855, 2532, 2619, 3207 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1676 |
| BglII | AGATCT | 2 cut(s) | 2815, 2884 |
| BlpI | GCTNAGC | 1 cut(s) | 177 |
| Bme1390I | CCNGG | 8 cut(s) | 100, 849, 1212, 1371, 2193, 2647, 2997, 4649 |
| Bme18I | GGWCC | 5 cut(s) | 1871, 2081, 2434, 2983, 4816 |
| BmeT110I | CYCGRG | 1 cut(s) | 1866 |
| BmrFI | CCNGG | 8 cut(s) | 100, 849, 1212, 1371, 2193, 2647, 2997, 4649 |
| BmrI | ACTGGG | 2 cut(s) | 686, 1302 |
| BmuI | ACTGGG | 2 cut(s) | 686, 1302 |
| BpiI | GAAGAC | 3 cut(s) | 51, 332, 1770 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2563, 2595, 3790, 3822 |
| BpmI | CTGGAG | 5 cut(s) | 812, 870, 2497, 3039, 3407 |
| Bpu10I | CCTNAGC | 4 cut(s) | 591, 3321, 4320, 4758 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 177 |
| Bpu14I | TTCGAA | 3 cut(s) | 11, 981, 4409 |
| BpuEI | CTTGAG | 5 cut(s) | 2762, 2909, 3921, 4487, 4564 |
| BpuMI | CCSGG | 2 cut(s) | 100, 1371 |
| BsaAI | YACGTR | 1 cut(s) | 1054 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3684 |
| BsaI | GGTCTC | 3 cut(s) | 40, 788, 1869 |
| BsaJI | CCNNGG | 8 cut(s) | 1369, 1641, 1768, 2645, 2667, 4479, 4542, 4647 |
| BsaWI | WCCGGW | 2 cut(s) | 2524, 4813 |
| Bse118I | RCCGGY | 3 cut(s) | 73, 233, 560 |
| Bse21I | CCTNAGG | 1 cut(s) | 4797 |
| Bse3DI | GCAATG | 3 cut(s) | 326, 3254, 3351 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3684 |
| BseAI | TCCGGA | 2 cut(s) | 2524, 4813 |
| BseBI | CCWGG | 6 cut(s) | 849, 1212, 2193, 2647, 2997, 4649 |
| BseDI | CCNNGG | 8 cut(s) | 1369, 1641, 1768, 2645, 2667, 4479, 4542, 4647 |
| BseJI | GATNNNNATC | 1 cut(s) | 3684 |
| BseMI | GCAATG | 3 cut(s) | 326, 3254, 3351 |
| BseRI | GAGGAG | 5 cut(s) | 299, 302, 728, 2961, 3464 |
| BseSI | GKGCMC | 6 cut(s) | 197, 767, 1370, 1742, 2578, 4226 |
| BseX3I | CGGCCG | 2 cut(s) | 75, 144 |
| BseYI | CCCAGC | 1 cut(s) | 662 |
| BsgI | GTGCAG | 2 cut(s) | 543, 2090 |
| Bsh1236I | CGCG | 3 cut(s) | 2669, 3379, 4755 |
| Bsh1285I | CGRYCG | 3 cut(s) | 78, 147, 1941 |
| BshNI | GGYRCC | 3 cut(s) | 557, 871, 1233 |
| BsiEI | CGRYCG | 3 cut(s) | 78, 147, 1941 |
| BsiHKAI | GWGCWC | 4 cut(s) | 51, 1184, 2578, 3937 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1866 |
| BsiSI | CCGG | 9 cut(s) | 74, 99, 131, 234, 561, 1371, 2525, 2745, 4814 |
| BsiWI | CGTACG | 1 cut(s) | 2088 |
| BslFI | GGGAC | 2 cut(s) | 1884, 2466 |
| BsmAI | GTCTC | 9 cut(s) | 40, 788, 1053, 1869, 2725, 3446, 3653, 3893, 4755 |
| BsmBI | CGTCTC | 1 cut(s) | 3893 |
| BsmFI | GGGAC | 2 cut(s) | 1884, 2466 |
| BsmI | GAATGC | 4 cut(s) | 792, 977, 2686, 2933 |
| Bso31I | GGTCTC | 3 cut(s) | 40, 788, 1869 |
| BsoBI | CYCGRG | 1 cut(s) | 1866 |
| Bsp119I | TTCGAA | 3 cut(s) | 11, 981, 4409 |
| Bsp120I | GGGCCC | 2 cut(s) | 193, 1366 |
| Bsp13I | TCCGGA | 2 cut(s) | 2524, 4813 |
| Bsp1407I | TGTACA | 2 cut(s) | 183, 1186 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 177 |
| BspEI | TCCGGA | 2 cut(s) | 2524, 4813 |
| BspFNI | CGCG | 3 cut(s) | 2669, 3379, 4755 |
| BspHI | TCATGA | 1 cut(s) | 2074 |
| BspMAI | CTGCAG | 5 cut(s) | 2900, 3622, 3658, 4603, 4873 |
| BspMI | ACCTGC | 2 cut(s) | 2749, 2889 |
| BspPI | GGATC | 7 cut(s) | 979, 1013, 1532, 2271, 2384, 3531, 3687 |
| BspQI | GCTCTTC | 1 cut(s) | 3613 |
| BspT104I | TTCGAA | 3 cut(s) | 11, 981, 4409 |
| BspT107I | GGYRCC | 3 cut(s) | 557, 871, 1233 |
| BspTI | CTTAAG | 1 cut(s) | 3029 |
| BspTNI | GGTCTC | 3 cut(s) | 40, 788, 1869 |
| BsrBI | CCGCTC | 3 cut(s) | 149, 1208, 3360 |
| BsrDI | GCAATG | 3 cut(s) | 326, 3254, 3351 |
| BsrFI | RCCGGY | 3 cut(s) | 73, 233, 560 |
| BsrGI | TGTACA | 2 cut(s) | 183, 1186 |
| BssAI | RCCGGY | 3 cut(s) | 73, 233, 560 |
| BssECI | CCNNGG | 8 cut(s) | 1369, 1641, 1768, 2645, 2667, 4479, 4542, 4647 |
| BssSI | CACGAG | 1 cut(s) | 1986 |
| BssT1I | CCWWGG | 2 cut(s) | 1641, 4542 |
| Bst2BI | CACGAG | 1 cut(s) | 1986 |
| Bst2UI | CCWGG | 6 cut(s) | 849, 1212, 2193, 2647, 2997, 4649 |
| Bst6I | CTCTTC | 3 cut(s) | 926, 1074, 3613 |
| BstAFI | CTTAAG | 1 cut(s) | 3029 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 644, 1598, 2681, 4110, 4830, 4839 |
| BstAUI | TGTACA | 2 cut(s) | 183, 1186 |
| BstBAI | YACGTR | 1 cut(s) | 1054 |
| BstBI | TTCGAA | 3 cut(s) | 11, 981, 4409 |
| BstC8I | GCNNGC | 9 cut(s) | 75, 535, 649, 1153, 2756, 2766, 4020, 4068, 4404 |
| BstDSI | CCRYGG | 1 cut(s) | 2667 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1435, 2504 |
| BstFNI | CGCG | 3 cut(s) | 2669, 3379, 4755 |
| BstH2I | RGCGCY | 1 cut(s) | 96 |
| BstHHI | GCGC | 3 cut(s) | 19, 95, 4757 |
| BstMAI | GTCTC | 9 cut(s) | 40, 788, 1053, 1869, 2725, 3446, 3653, 3893, 4755 |
| BstMCI | CGRYCG | 3 cut(s) | 78, 147, 1941 |
| BstNI | CCWGG | 6 cut(s) | 849, 1212, 2193, 2647, 2997, 4649 |
| BstNSI | RCATGY | 5 cut(s) | 469, 611, 1155, 4022, 4070 |
| BstSCI | CCNGG | 8 cut(s) | 98, 847, 1210, 1369, 2191, 2645, 2995, 4647 |
| BstSFI | CTRYAG | 8 cut(s) | 1125, 1435, 2452, 2896, 3618, 3654, 4599, 4869 |
| BstSLI | GKGCMC | 6 cut(s) | 197, 767, 1370, 1742, 2578, 4226 |
| BstUI | CGCG | 3 cut(s) | 2669, 3379, 4755 |
| BstV2I | GAAGAC | 3 cut(s) | 51, 332, 1770 |
| BstX2I | RGATCY | 6 cut(s) | 971, 1537, 2263, 2815, 2884, 3523 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 440, 2475, 3207, 3863 |
| BstYI | RGATCY | 6 cut(s) | 971, 1537, 2263, 2815, 2884, 3523 |
| BstZI | CGGCCG | 2 cut(s) | 75, 144 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4797 |
| BsuI | GTATCC | 4 cut(s) | 855, 2532, 2619, 3207 |
| BtgI | CCRYGG | 1 cut(s) | 2667 |
| BtgZI | GCGATG | 2 cut(s) | 3510, 3933 |
| BtsI | GCAGTG | 2 cut(s) | 513, 2682 |
| BveI | ACCTGC | 2 cut(s) | 2749, 2889 |
| Cac8I | GCNNGC | 9 cut(s) | 75, 535, 649, 1153, 2756, 2766, 4020, 4068, 4404 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1748, 2510, 2996, 4839 |
| CciI | TCATGA | 1 cut(s) | 2074 |
| CfoI | GCGC | 3 cut(s) | 19, 95, 4757 |
| Cfr10I | RCCGGY | 3 cut(s) | 73, 233, 560 |
| Cfr42I | CCGCGG | 1 cut(s) | 2670 |
| CseI | GACGC | 2 cut(s) | 3875, 3935 |
| DraI | TTTAAA | 2 cut(s) | 2136, 3792 |
| EaeI | YGGCCR | 7 cut(s) | 75, 144, 535, 1677, 2113, 2625, 4400 |
| EagI | CGGCCG | 2 cut(s) | 75, 144 |
| Eam1104I | CTCTTC | 3 cut(s) | 926, 1074, 3613 |
| EarI | CTCTTC | 3 cut(s) | 926, 1074, 3613 |
| Ecl136II | GAGCTC | 1 cut(s) | 49 |
| EclXI | CGGCCG | 2 cut(s) | 75, 144 |
| Eco130I | CCWWGG | 2 cut(s) | 1641, 4542 |
| Eco24I | GRGCYC | 4 cut(s) | 51, 197, 1370, 1431 |
| Eco31I | GGTCTC | 3 cut(s) | 40, 788, 1869 |
| Eco47I | GGWCC | 5 cut(s) | 1871, 2081, 2434, 2983, 4816 |
| Eco52I | CGGCCG | 2 cut(s) | 75, 144 |
| Eco53kI | GAGCTC | 1 cut(s) | 49 |
| Eco57I | CTGAAG | 7 cut(s) | 240, 809, 1048, 1920, 1985, 2796, 2870 |
| Eco72I | CACGTG | 1 cut(s) | 1054 |
| Eco81I | CCTNAGG | 1 cut(s) | 4797 |
| Eco88I | CYCGRG | 1 cut(s) | 1866 |
| EcoICRI | GAGCTC | 1 cut(s) | 49 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1435, 2504 |
| EcoO109I | RGGNCCY | 7 cut(s) | 194, 1366, 1367, 1574, 1871, 2845, 4762 |
| EcoRI | GAATTC | 3 cut(s) | 7, 1790, 1975 |
| EcoRII | CCWGG | 6 cut(s) | 847, 1210, 2191, 2645, 2995, 4647 |
| EcoT14I | CCWWGG | 2 cut(s) | 1641, 4542 |
| EcoT22I | ATGCAT | 2 cut(s) | 313, 3502 |
| EcoT38I | GRGCYC | 4 cut(s) | 51, 197, 1370, 1431 |
| ErhI | CCWWGG | 2 cut(s) | 1641, 4542 |
| Esp3I | CGTCTC | 1 cut(s) | 3893 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 905, 937 |
| FaqI | GGGAC | 2 cut(s) | 1884, 2466 |
| FauI | CCCGC | 1 cut(s) | 106 |
| FauNDI | CATATG | 1 cut(s) | 3202 |
| FbaI | TGATCA | 4 cut(s) | 2245, 3168, 3460, 4060 |
| FblI | GTMKAC | 2 cut(s) | 3822, 4548 |
| FriOI | GRGCYC | 4 cut(s) | 51, 197, 1370, 1431 |
| FspBI | CTAG | 8 cut(s) | 84, 1134, 1614, 2831, 3354, 3534, 4239, 4530 |
| GlaI | GCGC | 3 cut(s) | 18, 94, 4756 |
| GsaI | CCCAGC | 1 cut(s) | 666 |
| GsuI | CTGGAG | 5 cut(s) | 812, 870, 2497, 3039, 3407 |
| HaeII | RGCGCY | 1 cut(s) | 96 |
| HapII | CCGG | 9 cut(s) | 74, 99, 131, 234, 561, 1371, 2525, 2745, 4814 |
| HgaI | GACGC | 2 cut(s) | 3875, 3935 |
| HhaI | GCGC | 3 cut(s) | 19, 95, 4757 |
| Hin6I | GCGC | 3 cut(s) | 17, 93, 4755 |
| HinP1I | GCGC | 3 cut(s) | 17, 93, 4755 |
| HincII | GTYRAC | 3 cut(s) | 3714, 4171, 4720 |
| HindII | GTYRAC | 3 cut(s) | 3714, 4171, 4720 |
| HindIII | AAGCTT | 2 cut(s) | 2159, 2687 |
| HpaI | GTTAAC | 1 cut(s) | 3714 |
| HpaII | CCGG | 9 cut(s) | 74, 99, 131, 234, 561, 1371, 2525, 2745, 4814 |
| HphI | GGTGA | 7 cut(s) | 1209, 1554, 2111, 2730, 3410, 4495, 4785 |
| Hpy99I | CGWCG | 1 cut(s) | 73 |
| HpyCH4IV | ACGT | 4 cut(s) | 1053, 3303, 3816, 4215 |
| HpySE526I | ACGT | 4 cut(s) | 1053, 3303, 3816, 4215 |
| HspAI | GCGC | 3 cut(s) | 17, 93, 4755 |
| Kpn2I | TCCGGA | 2 cut(s) | 2524, 4813 |
| KpnI | GGTACC | 1 cut(s) | 1237 |
| KroI | GCCGGC | 1 cut(s) | 73 |
| KroNI | GCCGGC | 1 cut(s) | 75 |
| Ksp22I | TGATCA | 4 cut(s) | 2245, 3168, 3460, 4060 |
| KspAI | GTTAAC | 1 cut(s) | 3714 |
| KspI | CCGCGG | 1 cut(s) | 2670 |
| LguI | GCTCTTC | 1 cut(s) | 3613 |
| MaeI | CTAG | 8 cut(s) | 84, 1134, 1614, 2831, 3354, 3534, 4239, 4530 |
| MaeII | ACGT | 4 cut(s) | 1053, 3303, 3816, 4215 |
| MaeIII | GTNAC | 5 cut(s) | 468, 1239, 3019, 3162, 3812 |
| MbiI | CCGCTC | 3 cut(s) | 149, 1208, 3360 |
| MfeI | CAATTG | 3 cut(s) | 446, 2217, 3294 |
| MflI | RGATCY | 6 cut(s) | 971, 1537, 2263, 2815, 2884, 3523 |
| MlsI | TGGCCA | 3 cut(s) | 1679, 2627, 4402 |
| MluNI | TGGCCA | 3 cut(s) | 1679, 2627, 4402 |
| MlyI | GAGTC | 9 cut(s) | 143, 149, 1293, 1514, 2377, 2488, 2539, 2975, 3593 |
| MmeI | TCCRAC | 3 cut(s) | 835, 2496, 2606 |
| Mox20I | TGGCCA | 3 cut(s) | 1679, 2627, 4402 |
| Mph1103I | ATGCAT | 2 cut(s) | 313, 3502 |
| MroI | TCCGGA | 2 cut(s) | 2524, 4813 |
| MroNI | GCCGGC | 1 cut(s) | 73 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1777, 1790, 2795, 3270 |
| MscI | TGGCCA | 3 cut(s) | 1679, 2627, 4402 |
| MslI | CAYNNNNRTG | 5 cut(s) | 438, 612, 1136, 1405, 1830 |
| Msp20I | TGGCCA | 3 cut(s) | 1679, 2627, 4402 |
| MspA1I | CMGCKG | 4 cut(s) | 2669, 4156, 4839, 4874 |
| MspCI | CTTAAG | 1 cut(s) | 3029 |
| MspI | CCGG | 9 cut(s) | 74, 99, 131, 234, 561, 1371, 2525, 2745, 4814 |
| MspR9I | CCNGG | 8 cut(s) | 100, 849, 1212, 1371, 2193, 2647, 2997, 4649 |
| MunI | CAATTG | 3 cut(s) | 446, 2217, 3294 |
| Mva1269I | GAATGC | 4 cut(s) | 792, 977, 2686, 2933 |
| MvaI | CCWGG | 6 cut(s) | 849, 1212, 2193, 2647, 2997, 4649 |
| MvnI | CGCG | 3 cut(s) | 2669, 3379, 4755 |
| NaeI | GCCGGC | 1 cut(s) | 75 |
| NciI | CCSGG | 2 cut(s) | 100, 1371 |
| NdeI | CATATG | 1 cut(s) | 3202 |
| NgoMIV | GCCGGC | 1 cut(s) | 73 |
| NmuCI | GTSAC | 2 cut(s) | 3019, 3162 |
| NsiI | ATGCAT | 2 cut(s) | 313, 3502 |
| NspI | RCATGY | 5 cut(s) | 469, 611, 1155, 4022, 4070 |
| NspV | TTCGAA | 3 cut(s) | 11, 981, 4409 |
| OliI | CACNNNNGTG | 1 cut(s) | 1136 |
| PacI | TTAATTAA | 1 cut(s) | 777 |
| PaeI | GCATGC | 3 cut(s) | 1155, 4022, 4070 |
| PagI | TCATGA | 1 cut(s) | 2074 |
| PaqCI | CACCTGC | 1 cut(s) | 2749 |
| PciI | ACATGT | 1 cut(s) | 465 |
| PciSI | GCTCTTC | 1 cut(s) | 3613 |
| PctI | GAATGC | 4 cut(s) | 792, 977, 2686, 2933 |
| PdiI | GCCGGC | 1 cut(s) | 75 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1777, 1790, 2795, 3270 |
| PfeI | GAWTC | 7 cut(s) | 1684, 2333, 3179, 3313, 4391, 4565, 4627 |
| Pfl23II | CGTACG | 1 cut(s) | 2088 |
| PflFI | GACNNNGTC | 1 cut(s) | 3003 |
| PfoI | TCCNGGA | 2 cut(s) | 847, 2995 |
| PleI | GAGTC | 9 cut(s) | 142, 148, 1293, 1514, 2377, 2487, 2538, 2974, 3593 |
| PmaCI | CACGTG | 1 cut(s) | 1054 |
| PmlI | CACGTG | 1 cut(s) | 1054 |
| PpsI | GAGTC | 9 cut(s) | 142, 148, 1293, 1514, 2377, 2487, 2538, 2974, 3593 |
| Ppu21I | YACGTR | 1 cut(s) | 1054 |
| PpuMI | RGGWCCY | 1 cut(s) | 1871 |
| PscI | ACATGT | 1 cut(s) | 465 |
| PshBI | ATTAAT | 2 cut(s) | 777, 2148 |
| PsiI | TTATAA | 2 cut(s) | 2157, 2175 |
| Psp124BI | GAGCTC | 1 cut(s) | 51 |
| Psp1406I | AACGTT | 1 cut(s) | 3816 |
| Psp5II | RGGWCCY | 1 cut(s) | 1871 |
| Psp6I | CCWGG | 6 cut(s) | 847, 1210, 2191, 2645, 2995, 4647 |
| PspCI | CACGTG | 1 cut(s) | 1054 |
| PspFI | CCCAGC | 1 cut(s) | 662 |
| PspGI | CCWGG | 6 cut(s) | 847, 1210, 2191, 2645, 2995, 4647 |
| PspLI | CGTACG | 1 cut(s) | 2088 |
| PspOMI | GGGCCC | 2 cut(s) | 193, 1366 |
| PspPPI | RGGWCCY | 1 cut(s) | 1871 |
| PstI | CTGCAG | 5 cut(s) | 2900, 3622, 3658, 4603, 4873 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1748, 2510, 2996, 4839 |
| PsuI | RGATCY | 6 cut(s) | 971, 1537, 2263, 2815, 2884, 3523 |
| PsyI | GACNNNGTC | 1 cut(s) | 3003 |
| PvuII | CAGCTG | 1 cut(s) | 4874 |
| RseI | CAYNNNNRTG | 5 cut(s) | 438, 612, 1136, 1405, 1830 |
| SacI | GAGCTC | 1 cut(s) | 51 |
| SacII | CCGCGG | 1 cut(s) | 2670 |
| SapI | GCTCTTC | 1 cut(s) | 3613 |
| SchI | GAGTC | 9 cut(s) | 143, 149, 1293, 1514, 2377, 2488, 2539, 2975, 3593 |
| ScrFI | CCNGG | 8 cut(s) | 100, 849, 1212, 1371, 2193, 2647, 2997, 4649 |
| SfcI | CTRYAG | 8 cut(s) | 1125, 1435, 2452, 2896, 3618, 3654, 4599, 4869 |
| Sfr303I | CCGCGG | 1 cut(s) | 2670 |
| SfuI | TTCGAA | 3 cut(s) | 11, 981, 4409 |
| SgrBI | CCGCGG | 1 cut(s) | 2670 |
| SinI | GGWCC | 5 cut(s) | 1871, 2081, 2434, 2983, 4816 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 438, 612, 1136, 1405, 1830 |
| SmlI | CTYRAG | 6 cut(s) | 2777, 2888, 3029, 3936, 4466, 4579 |
| SmoI | CTYRAG | 6 cut(s) | 2777, 2888, 3029, 3936, 4466, 4579 |
| SphI | GCATGC | 3 cut(s) | 1155, 4022, 4070 |
| SspI | AATATT | 4 cut(s) | 890, 2916, 3130, 4305 |
| SspMI | CTAG | 8 cut(s) | 84, 1134, 1614, 2831, 3354, 3534, 4239, 4530 |
| SstI | GAGCTC | 1 cut(s) | 51 |
| StyD4I | CCNGG | 8 cut(s) | 98, 847, 1210, 1369, 2191, 2645, 2995, 4647 |
| StyI | CCWWGG | 2 cut(s) | 1641, 4542 |
| TaiI | ACGT | 4 cut(s) | 1056, 3306, 3819, 4218 |
| TaqI | TCGA | 9 cut(s) | 11, 121, 162, 981, 1161, 1941, 2257, 3597, 4409 |
| TaqII | GACCGA | 1 cut(s) | 196 |
| TatI | WGTACW | 6 cut(s) | 183, 426, 1186, 2710, 3112, 4350 |
| TauI | GCSGC | 8 cut(s) | 98, 149, 1670, 1898, 2669, 3360, 3382, 4839 |
| TfiI | GAWTC | 7 cut(s) | 1684, 2333, 3179, 3313, 4391, 4565, 4627 |
| TseFI | GTSAC | 2 cut(s) | 3019, 3162 |
| Tsp45I | GTSAC | 2 cut(s) | 3019, 3162 |
| TspGWI | ACGGA | 2 cut(s) | 344, 2076 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3003 |
| Vha464I | CTTAAG | 1 cut(s) | 3029 |
| VneI | GTGCAC | 1 cut(s) | 2574 |
| VpaK11BI | GGWCC | 5 cut(s) | 1871, 2081, 2434, 2983, 4816 |
| VspI | ATTAAT | 2 cut(s) | 777, 2148 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1435, 2504 |
| XbaI | TCTAGA | 1 cut(s) | 2830 |
| XceI | RCATGY | 5 cut(s) | 469, 611, 1155, 4022, 4070 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2993 |
| XmiI | GTMKAC | 2 cut(s) | 3822, 4548 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1777, 1790, 2795, 3270 |
| XspI | CTAG | 8 cut(s) | 84, 1134, 1614, 2831, 3354, 3534, 4239, 4530 |
| Zsp2I | ATGCAT | 2 cut(s) | 313, 3502 |