Belongs to the class-I aminoacyl-tRNA synthetase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G49030 AT5G49030 AT5G49030 |
| fragaria_vesca | FvH4_4g18060 FvH4_4g18060 FvH4_4g18060 FvH4_4g18060 FvH4_4g18060 FvH4_4g18060 |
| malus_domestica | MD13G1168400.v1.1 MD16G1168800.v1.1 |
| prunus_persica | Prupe.1G136500_v2.0.a1 Prupe.1G136500_v2.0.a1 |
| pyrus_communis | pycom13g14400 pycom16g14210 |
| rosa_chinensis | RchiOBHm_Chr4g0422271 |
| rosa_laevigata | RLG00000007623 |
| rosa_multiflora | Rmu_sc0013245.1_g000018 |
| rosa_roxburghii | Rroxscaffold_5G00364380 |
| rosa_rugosa | Rorug04G0179100 |
| rosa_samantha | Rh4AG238300 Rh4BG241400 Rh4CG253300 Rh4DG237000 |
| rosa_wichuraiana | Rw4G020620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 540, 558, 2144, 3231 |
| Acc36I | ACCTGC | 1 cut(s) | 1275 |
| AccBSI | CCGCTC | 1 cut(s) | 1746 |
| AccI | GTMKAC | 1 cut(s) | 2934 |
| AccII | CGCG | 4 cut(s) | 269, 1662, 1932, 2651 |
| AccIII | TCCGGA | 1 cut(s) | 907 |
| AciI | CCGC | 9 cut(s) | 267, 1055, 1488, 1505, 1662, 1744, 2542, 2651, 3223 |
| AclI | AACGTT | 1 cut(s) | 2202 |
| AclWI | GGATC | 6 cut(s) | 654, 767, 1917, 2073, 2204, 3134 |
| AcoI | YGGCCR | 4 cut(s) | 264, 808, 1011, 2786 |
| AcsI | RAATTY | 6 cut(s) | 381, 445, 2325, 2473, 2566, 2765 |
| AcuI | CTGAAG | 5 cut(s) | 303, 954, 1182, 1436, 1488 |
| AfaI | GTAC | 6 cut(s) | 1098, 1500, 1895, 2051, 2738, 2896 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 971, 1388, 1635, 3089, 3188 |
| AjnI | CCWGG | 4 cut(s) | 574, 1031, 1381, 2880 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2892, 2924 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 28 |
| Alw21I | GWGCWC | 1 cut(s) | 3207 |
| Alw26I | GTCTC | 4 cut(s) | 661, 1832, 2279, 3141 |
| AlwI | GGATC | 6 cut(s) | 654, 767, 1917, 2073, 2204, 3134 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 131, 893, 1382, 3123, 3225 |
| Ama87I | CYCGRG | 2 cut(s) | 249, 3200 |
| Aor13HI | TCCGGA | 1 cut(s) | 907 |
| ApoI | RAATTY | 6 cut(s) | 381, 445, 2325, 2473, 2566, 2765 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2317, 2349 |
| AseI | ATTAAT | 1 cut(s) | 531 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1656, 2847 |
| AspS9I | GGNCC | 5 cut(s) | 254, 464, 1149, 1369, 2318 |
| AsuC2I | CCSGG | 1 cut(s) | 1152 |
| AsuHPI | GGTGA | 3 cut(s) | 494, 2315, 2881 |
| AvaI | CYCGRG | 2 cut(s) | 249, 3200 |
| AvaII | GGWCC | 3 cut(s) | 254, 464, 1369 |
| BaeGI | GKGCMC | 1 cut(s) | 2612 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1565, 1598 |
| BalI | TGGCCA | 3 cut(s) | 810, 1013, 2788 |
| BauI | CACGAG | 1 cut(s) | 3138 |
| BbsI | GAAGAC | 1 cut(s) | 2027 |
| Bbv12I | GWGCWC | 1 cut(s) | 3207 |
| BbvCI | CCTCAGC | 1 cut(s) | 2706 |
| BceAI | ACGGC | 3 cut(s) | 894, 1781, 2822 |
| BciT130I | CCWGG | 4 cut(s) | 576, 1033, 1383, 2882 |
| BciVI | GTATCC | 2 cut(s) | 915, 1593 |
| BclI | TGATCA | 1 cut(s) | 628 |
| BcnI | CCSGG | 1 cut(s) | 1152 |
| BcoDI | GTCTC | 4 cut(s) | 661, 1832, 2279, 3141 |
| BfaI | CTAG | 4 cut(s) | 204, 1740, 2625, 2967 |
| BfmI | CTRYAG | 5 cut(s) | 1282, 2040, 2667, 2985, 3261 |
| BfuAI | ACCTGC | 1 cut(s) | 1275 |
| BfuI | GTATCC | 2 cut(s) | 915, 1593 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 59 |
| BglII | AGATCT | 3 cut(s) | 245, 1201, 1270 |
| Bme1390I | CCNGG | 5 cut(s) | 576, 1033, 1152, 1383, 2882 |
| Bme18I | GGWCC | 3 cut(s) | 254, 464, 1369 |
| BmeT110I | CYCGRG | 2 cut(s) | 249, 3200 |
| BmgT120I | GGNCC | 5 cut(s) | 254, 464, 1149, 1369, 2318 |
| BmiI | GGNNCC | 5 cut(s) | 1821, 2084, 2127, 2260, 2914 |
| BmrFI | CCNGG | 5 cut(s) | 576, 1033, 1152, 1383, 2882 |
| BmsI | GCATC | 8 cut(s) | 1652, 1666, 1873, 1949, 2080, 2914, 3022, 3155 |
| BpiI | GAAGAC | 1 cut(s) | 2027 |
| BpmI | CTGGAG | 4 cut(s) | 880, 2899, 2903, 3240 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2706 |
| BpuEI | CTTGAG | 2 cut(s) | 2873, 3168 |
| BpuMI | CCSGG | 1 cut(s) | 1152 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1926, 2070 |
| BsaJI | CCNNGG | 6 cut(s) | 1031, 1815, 2865, 2928, 3054, 3144 |
| BsaWI | WCCGGW | 2 cut(s) | 907, 1297 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1012, 1042, 2250, 2280, 2620, 2650, 3084, 3114 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 971, 1388, 1635, 3089, 3188 |
| Bse1I | ACTGG | 9 cut(s) | 752, 851, 863, 1414, 1793, 2136, 2734, 2916, 2955 |
| Bse3DI | GCAATG | 3 cut(s) | 1640, 1737, 3008 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1926, 2070 |
| BseAI | TCCGGA | 1 cut(s) | 907 |
| BseBI | CCWGG | 4 cut(s) | 576, 1033, 1383, 2882 |
| BseDI | CCNNGG | 6 cut(s) | 1031, 1815, 2865, 2928, 3054, 3144 |
| BseJI | GATNNNNATC | 2 cut(s) | 1926, 2070 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 971, 1388, 1635, 3089, 3188 |
| BseMI | GCAATG | 3 cut(s) | 1640, 1737, 3008 |
| BseMII | CTCAG | 5 cut(s) | 722, 806, 2363, 2697, 3047 |
| BseNI | ACTGG | 9 cut(s) | 752, 851, 863, 1414, 1793, 2136, 2734, 2916, 2955 |
| BseRI | GAGGAG | 1 cut(s) | 1347 |
| BseSI | GKGCMC | 1 cut(s) | 2612 |
| BseYI | CCCAGC | 1 cut(s) | 44 |
| BsgI | GTGCAG | 1 cut(s) | 1829 |
| Bsh1236I | CGCG | 4 cut(s) | 269, 1662, 1932, 2651 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1629, 2316 |
| BsiEI | CGRYCG | 2 cut(s) | 1629, 2316 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3207 |
| BsiHKCI | CYCGRG | 2 cut(s) | 249, 3200 |
| BsiSI | CCGG | 3 cut(s) | 908, 1152, 1298 |
| BslFI | GGGAC | 1 cut(s) | 849 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 971, 1388, 1635, 3089, 3188 |
| BsmAI | GTCTC | 4 cut(s) | 661, 1832, 2279, 3141 |
| BsmBI | CGTCTC | 1 cut(s) | 2279 |
| BsmFI | GGGAC | 1 cut(s) | 849 |
| BsmI | GAATGC | 2 cut(s) | 1072, 1319 |
| BsoBI | CYCGRG | 2 cut(s) | 249, 3200 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2612, 3207 |
| Bsp13I | TCCGGA | 1 cut(s) | 907 |
| Bsp68I | TCGCGA | 1 cut(s) | 1932 |
| BspACI | CCGC | 9 cut(s) | 267, 1055, 1488, 1505, 1662, 1744, 2542, 2651, 3223 |
| BspCNI | CTCAG | 5 cut(s) | 721, 805, 2364, 2698, 3046 |
| BspEI | TCCGGA | 1 cut(s) | 907 |
| BspFNI | CGCG | 4 cut(s) | 269, 1662, 1932, 2651 |
| BspLI | GGNNCC | 5 cut(s) | 1821, 2084, 2127, 2260, 2914 |
| BspMAI | CTGCAG | 3 cut(s) | 1286, 2044, 2989 |
| BspMI | ACCTGC | 1 cut(s) | 1275 |
| BspPI | GGATC | 6 cut(s) | 654, 767, 1917, 2073, 2204, 3134 |
| BspQI | GCTCTTC | 1 cut(s) | 1999 |
| BsrBI | CCGCTC | 1 cut(s) | 1746 |
| BsrDI | GCAATG | 3 cut(s) | 1640, 1737, 3008 |
| BsrI | ACTGG | 9 cut(s) | 752, 851, 863, 1414, 1793, 2136, 2734, 2916, 2955 |
| BssECI | CCNNGG | 6 cut(s) | 1031, 1815, 2865, 2928, 3054, 3144 |
| BssSI | CACGAG | 1 cut(s) | 3138 |
| BssT1I | CCWWGG | 3 cut(s) | 1815, 2928, 3054 |
| Bst2BI | CACGAG | 1 cut(s) | 3138 |
| Bst2UI | CCWGG | 4 cut(s) | 576, 1033, 1383, 2882 |
| Bst4CI | ACNGT | 8 cut(s) | 322, 404, 700, 1101, 2221, 2460, 2489, 2644 |
| Bst6I | CTCTTC | 3 cut(s) | 1830, 1999, 2820 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1067, 3216 |
| BstC8I | GCNNGC | 5 cut(s) | 1212, 1490, 2406, 2454, 2790 |
| BstDEI | CTNAG | 6 cut(s) | 681, 708, 792, 2372, 2706, 3033 |
| BstFNI | CGCG | 4 cut(s) | 269, 1662, 1932, 2651 |
| BstMAI | GTCTC | 4 cut(s) | 661, 1832, 2279, 3141 |
| BstMCI | CGRYCG | 2 cut(s) | 1629, 2316 |
| BstNI | CCWGG | 4 cut(s) | 576, 1033, 1383, 2882 |
| BstNSI | RCATGY | 3 cut(s) | 920, 2408, 2456 |
| BstSCI | CCNGG | 5 cut(s) | 574, 1031, 1150, 1381, 2880 |
| BstSFI | CTRYAG | 5 cut(s) | 1282, 2040, 2667, 2985, 3261 |
| BstSLI | GKGCMC | 1 cut(s) | 2612 |
| BstUI | CGCG | 4 cut(s) | 269, 1662, 1932, 2651 |
| BstV2I | GAAGAC | 1 cut(s) | 2027 |
| BstX2I | RGATCY | 6 cut(s) | 245, 646, 1201, 1270, 1909, 2209 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 858, 1593, 2249 |
| BstYI | RGATCY | 6 cut(s) | 245, 646, 1201, 1270, 1909, 2209 |
| BsuI | GTATCC | 2 cut(s) | 915, 1593 |
| BtsI | GCAGTG | 1 cut(s) | 1068 |
| BtsIMutI | CAGTG | 9 cut(s) | 856, 961, 1068, 1407, 1464, 1653, 2143, 2369, 2456 |
| BtuMI | TCGCGA | 1 cut(s) | 1932 |
| BveI | ACCTGC | 1 cut(s) | 1275 |
| Cac8I | GCNNGC | 5 cut(s) | 1212, 1490, 2406, 2454, 2790 |
| CaiI | CAGNNNCTG | 5 cut(s) | 131, 893, 1382, 3123, 3225 |
| Cfr13I | GGNCC | 5 cut(s) | 254, 464, 1149, 1369, 2318 |
| CseI | GACGC | 2 cut(s) | 2261, 3008 |
| Csp6I | GTAC | 6 cut(s) | 1097, 1499, 1894, 2050, 2737, 2895 |
| CviQI | GTAC | 6 cut(s) | 1097, 1499, 1894, 2050, 2737, 2895 |
| DdeI | CTNAG | 6 cut(s) | 681, 708, 792, 2372, 2706, 3033 |
| DraI | TTTAAA | 2 cut(s) | 507, 519 |
| EaeI | YGGCCR | 4 cut(s) | 264, 808, 1011, 2786 |
| Eam1104I | CTCTTC | 3 cut(s) | 1830, 1999, 2820 |
| EarI | CTCTTC | 3 cut(s) | 1830, 1999, 2820 |
| Eco130I | CCWWGG | 3 cut(s) | 1815, 2928, 3054 |
| Eco47I | GGWCC | 3 cut(s) | 254, 464, 1369 |
| Eco57I | CTGAAG | 5 cut(s) | 303, 954, 1182, 1436, 1488 |
| Eco88I | CYCGRG | 2 cut(s) | 249, 3200 |
| EcoO109I | RGGNCCY | 1 cut(s) | 254 |
| EcoRII | CCWGG | 4 cut(s) | 574, 1031, 1381, 2880 |
| EcoT14I | CCWWGG | 3 cut(s) | 1815, 2928, 3054 |
| EcoT22I | ATGCAT | 1 cut(s) | 1888 |
| ErhI | CCWWGG | 3 cut(s) | 1815, 2928, 3054 |
| Esp3I | CGTCTC | 1 cut(s) | 2279 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 112, 144, 2580, 2612 |
| FaqI | GGGAC | 1 cut(s) | 849 |
| FauI | CCCGC | 2 cut(s) | 1481, 1655 |
| FauNDI | CATATG | 2 cut(s) | 189, 1588 |
| FbaI | TGATCA | 1 cut(s) | 628 |
| FblI | GTMKAC | 1 cut(s) | 2934 |
| FspBI | CTAG | 4 cut(s) | 204, 1740, 2625, 2967 |
| GsaI | CCCAGC | 1 cut(s) | 48 |
| GsuI | CTGGAG | 4 cut(s) | 880, 2899, 2903, 3240 |
| HapII | CCGG | 3 cut(s) | 908, 1152, 1298 |
| HgaI | GACGC | 2 cut(s) | 2261, 3008 |
| HincII | GTYRAC | 1 cut(s) | 2557 |
| HindII | GTYRAC | 1 cut(s) | 2557 |
| HindIII | AAGCTT | 3 cut(s) | 542, 1073, 1238 |
| HpaII | CCGG | 3 cut(s) | 908, 1152, 1298 |
| HphI | GGTGA | 3 cut(s) | 494, 2315, 2881 |
| Hpy166II | GTNNAC | 6 cut(s) | 856, 1447, 1464, 2557, 2739, 2935 |
| Hpy8I | GTNNAC | 6 cut(s) | 856, 1447, 1464, 2557, 2739, 2935 |
| Hpy99I | CGWCG | 2 cut(s) | 2747, 3002 |
| HpyCH4III | ACNGT | 8 cut(s) | 322, 404, 700, 1101, 2221, 2460, 2489, 2644 |
| HpyCH4IV | ACGT | 3 cut(s) | 2202, 2601, 3099 |
| HpyF3I | CTNAG | 6 cut(s) | 681, 708, 792, 2372, 2706, 3033 |
| HpySE526I | ACGT | 3 cut(s) | 2202, 2601, 3099 |
| Kpn2I | TCCGGA | 1 cut(s) | 907 |
| Ksp22I | TGATCA | 1 cut(s) | 628 |
| LguI | GCTCTTC | 1 cut(s) | 1999 |
| LmnI | GCTCC | 5 cut(s) | 1384, 2131, 2258, 2689, 2918 |
| LweI | GCATC | 8 cut(s) | 1652, 1666, 1873, 1949, 2080, 2914, 3022, 3155 |
| MaeI | CTAG | 4 cut(s) | 204, 1740, 2625, 2967 |
| MaeII | ACGT | 3 cut(s) | 2202, 2601, 3099 |
| MaeIII | GTNAC | 4 cut(s) | 93, 1405, 2198, 2308 |
| MbiI | CCGCTC | 1 cut(s) | 1746 |
| MfeI | CAATTG | 1 cut(s) | 600 |
| MflI | RGATCY | 6 cut(s) | 245, 646, 1201, 1270, 1909, 2209 |
| MhlI | GDGCHC | 2 cut(s) | 2612, 3207 |
| MlsI | TGGCCA | 3 cut(s) | 810, 1013, 2788 |
| MluNI | TGGCCA | 3 cut(s) | 810, 1013, 2788 |
| MlyI | GAGTC | 5 cut(s) | 871, 1361, 2786, 2886, 3129 |
| MmeI | TCCRAC | 1 cut(s) | 989 |
| Mox20I | TGGCCA | 3 cut(s) | 810, 1013, 2788 |
| Mph1103I | ATGCAT | 1 cut(s) | 1888 |
| MroI | TCCGGA | 1 cut(s) | 907 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1656, 2847 |
| MscI | TGGCCA | 3 cut(s) | 810, 1013, 2788 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1901 |
| Msp20I | TGGCCA | 3 cut(s) | 810, 1013, 2788 |
| MspA1I | CMGCKG | 4 cut(s) | 281, 2542, 3225, 3260 |
| MspI | CCGG | 3 cut(s) | 908, 1152, 1298 |
| MspR9I | CCNGG | 5 cut(s) | 576, 1033, 1152, 1383, 2882 |
| MunI | CAATTG | 1 cut(s) | 600 |
| Mva1269I | GAATGC | 2 cut(s) | 1072, 1319 |
| MvaI | CCWGG | 4 cut(s) | 576, 1033, 1383, 2882 |
| MvnI | CGCG | 4 cut(s) | 269, 1662, 1932, 2651 |
| NciI | CCSGG | 1 cut(s) | 1152 |
| NdeI | CATATG | 2 cut(s) | 189, 1588 |
| NlaIV | GGNNCC | 5 cut(s) | 1821, 2084, 2127, 2260, 2914 |
| NmeAIII | GCCGAG | 1 cut(s) | 3169 |
| NmuCI | GTSAC | 2 cut(s) | 93, 1405 |
| NruI | TCGCGA | 1 cut(s) | 1932 |
| NsiI | ATGCAT | 1 cut(s) | 1888 |
| NspI | RCATGY | 3 cut(s) | 920, 2408, 2456 |
| PaeI | GCATGC | 2 cut(s) | 2408, 2456 |
| PaeR7I | CTCGAG | 1 cut(s) | 249 |
| PciSI | GCTCTTC | 1 cut(s) | 1999 |
| PctI | GAATGC | 2 cut(s) | 1072, 1319 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1656, 2847 |
| PfeI | GAWTC | 6 cut(s) | 67, 716, 1565, 1699, 1985, 2951 |
| PflFI | GACNNNGTC | 1 cut(s) | 1389 |
| PfoI | TCCNGGA | 2 cut(s) | 1381, 2880 |
| Ple19I | CGATCG | 1 cut(s) | 2316 |
| PleI | GAGTC | 5 cut(s) | 870, 1360, 2785, 2885, 3128 |
| PpsI | GAGTC | 5 cut(s) | 870, 1360, 2785, 2885, 3128 |
| PpuMI | RGGWCCY | 1 cut(s) | 254 |
| PshBI | ATTAAT | 1 cut(s) | 531 |
| PsiI | TTATAA | 4 cut(s) | 540, 558, 2144, 3231 |
| Psp1406I | AACGTT | 1 cut(s) | 2202 |
| Psp5II | RGGWCCY | 1 cut(s) | 254 |
| Psp6I | CCWGG | 4 cut(s) | 574, 1031, 1381, 2880 |
| PspFI | CCCAGC | 1 cut(s) | 44 |
| PspGI | CCWGG | 4 cut(s) | 574, 1031, 1381, 2880 |
| PspN4I | GGNNCC | 5 cut(s) | 1821, 2084, 2127, 2260, 2914 |
| PspPI | GGNCC | 5 cut(s) | 254, 464, 1149, 1369, 2318 |
| PspPPI | RGGWCCY | 1 cut(s) | 254 |
| PstI | CTGCAG | 3 cut(s) | 1286, 2044, 2989 |
| PstNI | CAGNNNCTG | 5 cut(s) | 131, 893, 1382, 3123, 3225 |
| PsuI | RGATCY | 6 cut(s) | 245, 646, 1201, 1270, 1909, 2209 |
| PsyI | GACNNNGTC | 1 cut(s) | 1389 |
| PvuI | CGATCG | 1 cut(s) | 2316 |
| PvuII | CAGCTG | 2 cut(s) | 281, 3260 |
| RruI | TCGCGA | 1 cut(s) | 1932 |
| RsaI | GTAC | 6 cut(s) | 1098, 1500, 1895, 2051, 2738, 2896 |
| RsaNI | GTAC | 6 cut(s) | 1097, 1499, 1894, 2050, 2737, 2895 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1901 |
| SapI | GCTCTTC | 1 cut(s) | 1999 |
| Sau96I | GGNCC | 5 cut(s) | 254, 464, 1149, 1369, 2318 |
| SchI | GAGTC | 5 cut(s) | 871, 1361, 2786, 2886, 3129 |
| ScrFI | CCNGG | 5 cut(s) | 576, 1033, 1152, 1383, 2882 |
| SduI | GDGCHC | 2 cut(s) | 2612, 3207 |
| SfaNI | GCATC | 8 cut(s) | 1652, 1666, 1873, 1949, 2080, 2914, 3022, 3155 |
| SfcI | CTRYAG | 5 cut(s) | 1282, 2040, 2667, 2985, 3261 |
| Sfr274I | CTCGAG | 1 cut(s) | 249 |
| SinI | GGWCC | 3 cut(s) | 254, 464, 1369 |
| SlaI | CTCGAG | 1 cut(s) | 249 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1901 |
| SmlI | CTYRAG | 3 cut(s) | 249, 2852, 3183 |
| SmoI | CTYRAG | 3 cut(s) | 249, 2852, 3183 |
| SphI | GCATGC | 2 cut(s) | 2408, 2456 |
| SsiI | CCGC | 9 cut(s) | 267, 1055, 1488, 1505, 1662, 1744, 2542, 2651, 3223 |
| SspI | AATATT | 2 cut(s) | 1617, 2691 |
| SspMI | CTAG | 4 cut(s) | 204, 1740, 2625, 2967 |
| StyD4I | CCNGG | 5 cut(s) | 574, 1031, 1150, 1381, 2880 |
| StyI | CCWWGG | 3 cut(s) | 1815, 2928, 3054 |
| TaaI | ACNGT | 8 cut(s) | 322, 404, 700, 1101, 2221, 2460, 2489, 2644 |
| TaiI | ACGT | 3 cut(s) | 2205, 2604, 3102 |
| TaqI | TCGA | 6 cut(s) | 250, 640, 923, 2285, 2564, 3105 |
| TaqII | GACCGA | 1 cut(s) | 1643 |
| TatI | WGTACW | 3 cut(s) | 1096, 1498, 2736 |
| TauI | GCSGC | 3 cut(s) | 269, 1746, 3225 |
| TfiI | GAWTC | 6 cut(s) | 67, 716, 1565, 1699, 1985, 2951 |
| TscAI | CASTG | 9 cut(s) | 863, 961, 1068, 1414, 1471, 1653, 2143, 2376, 2463 |
| TseFI | GTSAC | 2 cut(s) | 93, 1405 |
| Tsp45I | GTSAC | 2 cut(s) | 93, 1405 |
| TspGWI | ACGGA | 4 cut(s) | 459, 1364, 2321, 2718 |
| TspRI | CASTG | 9 cut(s) | 863, 961, 1068, 1414, 1471, 1653, 2143, 2376, 2463 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1389 |
| VpaK11BI | GGWCC | 3 cut(s) | 254, 464, 1369 |
| VspI | ATTAAT | 1 cut(s) | 531 |
| XapI | RAATTY | 6 cut(s) | 381, 445, 2325, 2473, 2566, 2765 |
| XceI | RCATGY | 3 cut(s) | 920, 2408, 2456 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1006, 1379 |
| XhoI | CTCGAG | 1 cut(s) | 249 |
| XmiI | GTMKAC | 1 cut(s) | 2934 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1656, 2847 |
| XspI | CTAG | 4 cut(s) | 204, 1740, 2625, 2967 |
| Zsp2I | ATGCAT | 1 cut(s) | 1888 |