Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0009258

Physical Location & Seq

Genomic Coordinates Forward (+)

27078181 .. 27081513

Gene Structure 3333 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g25250.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGCTGAAACCGGTTTCGTCCGGTTTCAGGGTGGTCTGGACCCGGCAGCCGAGGAATTCAGGCCCAGAAACCCGAACCCGATACCCGTTTTTAGCCTCCCACCACCACCACCGCCTCTACTACCTCATCACCAAGTTTATTATCCCTACCCAGTACCGCCTCCTCCGCCACCACCACCACCGCCGATGAACGAAGTCGTGGCGGTGCCCTACGTACCGTCACCCGCGGCGTACGTTAGCGCGGTGACGGCGGTGCACTCCCCGATCCCGCCTCCGGCCGCGGCGCCGACTCGGGCGCTGCTGCTGAGGCCCGTGCCGTGTGACGTCAGCGAGGTGACGATTCGGAGGGAGCTGGAGGCGTTCGGGCAGGTGAGGTGGGTGCAGATGGAGCGGTCCTGCGACGGGATCGTGACTGTCCATTTCTACGATCTCAGGCATGCAGAGAAGGCCTTGGCCGAGATTCGAGAGCTGCACATGCAGCACCAGGCCCGCCTCCGTAGCTCCGGTCCTTACCGGAGCTCCACCGTGATCCTCAGTAGCGACGTCTGGCCCCACTTCGTGATTCCGGTCCACACGGCAATCCCCGACGGACACAACCAAGGCACCATCGTGATATTCAATCTCGACTCGGCCGTGACCACCAGCCGTGTCAAGCAAACGTTCCAAGCTTTTGGTGCTGTGAAGGAATTGAGAGAGACGCCGTCGAAGAAGCACCAGAAATTCGTGGAGTTTTTCGATGTGAGACACGCCGCGAGAGCTCTCCAGGAGATGAACGGGAAGGAATTTCACGGCAAACAGATTGTGATCGAGTTCAGTCGCCCCGGAGGCAACAGCTGGAAGAAGCTGAATTCTCTTACCAACACTGCTAACCTAGCGCCGCCTGAATTATATCTGCCTGAATTGCCTCAGACATTCTCCGGCCACTCTCGGTTCAGTGCAGGCTCGCCGCGAATGTATGGCTCGAGTGGGCCTAATTCGGGGTTTGGAAATGCTCATGTGGAGTCTCTTATGGCGGAGTTGAATTTGGGTGGAATTGAAGAAAGGGAGTCGGGTGACCACTCGAGAAGGGTTTCGACTAAGAAGCAAACCGGCCAGGGAATGGTAACAAGTCCAAGGCAGCTGCAGCCACCTCCGCCACCGCCACCTAGGAGTAGTAGGGGGAAGAGAGGCAAGCAACCCAAGAAATTTGATGCTCGTTTTCTGATCAAAGAAGATATCATGGTTGAATCCAGAAGCGATCCAAGAACCACCTTGATGATCAAGAACATACCCAACAAGTACAGTCAGAAGCTGCTACTGAGCATGCTGGACAACCACTGCATTCATTGCAACGATCAGATTCTTCGCGACGGCGATGAAGACCAGCCTTTGTCGTCCTACGATTTCATTTATCTTCCAATCGATTTCAATAACAAATGCAATGTAGGTTATGGGTTTGTGAACATGACAAGCCCAGAAGCAACATGGAGGCTTTACAAAGCCTTCCACCACCAGAATTGGGAGGTCTTTAACTCCAGAAAAATCTGTGAAGTCACCTACGCTAGAGTTCAGGGACTGGAAGCGTTGAAGGAGCATTTCAAGAACTCGAAGTTCCCGAGTGAAATGGATCACTACTTGCCGGTGGTGTTTACGCCGCCGCGGGACGGCAAGCGTGTGACGGACCCACAACCCATCTTCGGCGTCCAACACAAGTCCGGCAGCAGCAACTCCTCCGCCATTAATCACCCCATTACTCTCCTCCTGCCTCAATCACATCAACACAACCATGACAACATGGATGAGTCGACAGAACACTGTAGCAGCCGAAACGGCGGCGAGATGAGTCTTAATGACGACGACGACGACGACGACCAAGACAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_2

Protein Analysis

621

Amino Acids

69.51

Weight (kDa)

6.99

Isoelectric Point (pI)

58.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_occluded	PF16842	202 - 267	1e-05	Occluded RNA-recognition motif
RRM_1	PF00076	203 - 267	5.9e-11	RNA recognition motif
RRM_2	PF04059	415 - 519	1.5e-30	RNA recognition motif 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26120
fragaria_vesca	FvH4_4g25250 FvH4_4g25250 FvH4_4g25250
malus_domestica	MD13G1105600.v1.1 MD16G1105800.v1.1
prunus_persica	Prupe.1G240800_v2.0.a1 Prupe.1G240800_v2.0.a1
pyrus_communis	pycom13g09160
rosa_chinensis	RchiOBHm_Chr4g0432441
rosa_laevigata	RLG00000006842
rosa_multiflora	Rmu_co8411925.1_g000001 Rmu_sc0001084.1_g000018 Rmu_sc0038130.1_g000001
rosa_roxburghii	Rroxscaffold_3G00239560 Rroxscaffold_5G00373920
rosa_rugosa	Rorug04G0259000
rosa_samantha	Rh4AG314300 Rh4BG322100 Rh4CG337200 Rh4DG317800
rosa_wichuraiana	Rw4G027330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	358
AatII	GACGTC	2 cut(s)	327, 546
Acc36I	ACCTGC	1 cut(s)	358
AccB1I	GGYRCC	3 cut(s)	205, 283, 602
AccB7I	CCANNNNNTGG	1 cut(s)	1099
AccBSI	CCGCTC	1 cut(s)	391
AccI	GTMKAC	1 cut(s)	1784
AccII	CGCG	7 cut(s)	227, 242, 281, 752, 949, 1347, 1639
AclI	AACGTT	1 cut(s)	659
AclWI	GGATC	5 cut(s)	259, 413, 523, 1232, 1614
AcoI	YGGCCR	5 cut(s)	276, 453, 630, 919, 1090
AcsI	RAATTY	6 cut(s)	56, 719, 782, 847, 1021, 1184
AcyI	GRCGYC	5 cut(s)	284, 324, 543, 698, 1680
AdeI	CACNNNGTG	1 cut(s)	559
AfaI	GTAC	4 cut(s)	156, 216, 233, 1280
AfiI	CCNNNNNNNGG	8 cut(s)	28, 274, 402, 977, 1099, 1498, 1643, 1676
AgeI	ACCGGT	1 cut(s)	11
AgsI	TTSAA	7 cut(s)	619, 1021, 1037, 1226, 1408, 1567, 1579
AjnI	CCWGG	3 cut(s)	483, 762, 1092
AleI	CACNNNNGTG	1 cut(s)	608
Alw21I	GWGCWC	3 cut(s)	258, 521, 760
Alw26I	GTCTC	3 cut(s)	689, 736, 1008
Alw44I	GTGCAC	1 cut(s)	254
AlwI	GGATC	5 cut(s)	259, 413, 523, 1232, 1614
AlwNI	CAGNNNCTG	2 cut(s)	1291, 1555
Ama87I	CYCGRG	4 cut(s)	291, 961, 1060, 1594
ApaLI	GTGCAC	1 cut(s)	254
ApoI	RAATTY	6 cut(s)	56, 719, 782, 847, 1021, 1184
AseI	ATTAAT	1 cut(s)	1719
AsiGI	ACCGGT	1 cut(s)	11
Asp700I	GAANNNNTTC	1 cut(s)	1069
AspA2I	CCTAGG	1 cut(s)	1145
AspLEI	GCGC	4 cut(s)	242, 286, 298, 877
AsuC2I	CCSGG	2 cut(s)	44, 822
AsuHPI	GGTGA	8 cut(s)	122, 213, 256, 346, 382, 1064, 1525, 1715
AvaI	CYCGRG	4 cut(s)	291, 961, 1060, 1594
AvaII	GGWCC	5 cut(s)	40, 393, 506, 568, 1660
AvrII	CCTAGG	1 cut(s)	1145
BaeGI	GKGCMC	2 cut(s)	210, 258
BanI	GGYRCC	3 cut(s)	205, 283, 602
BanII	GRGCYC	2 cut(s)	521, 760
BbsI	GAAGAC	1 cut(s)	1365
Bbv12I	GWGCWC	3 cut(s)	258, 521, 760
BbvCI	CCTCAGC	1 cut(s)	305
BccI	CCATC	3 cut(s)	379, 614, 1679
BciT130I	CCWGG	3 cut(s)	485, 764, 1094
BclI	TGATCA	2 cut(s)	1203, 1257
BcnI	CCSGG	2 cut(s)	44, 822
BcoDI	GTCTC	3 cut(s)	689, 736, 1008
BfaI	CTAG	3 cut(s)	872, 1146, 1542
BfmI	CTRYAG	2 cut(s)	1121, 1795
BfoI	RGCGCY	3 cut(s)	287, 299, 878
BfuAI	ACCTGC	1 cut(s)	358
BglI	GCCNNNNNGGC	2 cut(s)	825, 1809
BlnI	CCTAGG	1 cut(s)	1145
Bme1390I	CCNGG	5 cut(s)	44, 485, 764, 822, 1094
Bme18I	GGWCC	5 cut(s)	40, 393, 506, 568, 1660
BmeT110I	CYCGRG	4 cut(s)	291, 961, 1060, 1594
BmiI	GGNNCC	6 cut(s)	42, 207, 285, 551, 604, 1662
BmrFI	CCNGG	5 cut(s)	44, 485, 764, 822, 1094
BmrI	ACTGGG	1 cut(s)	146
BmsI	GCATC	1 cut(s)	1180
BmuI	ACTGGG	1 cut(s)	146
BpiI	GAAGAC	1 cut(s)	1365
BpmI	CTGGAG	3 cut(s)	374, 746, 1498
Bpu10I	CCTNAGC	1 cut(s)	305
BpuMI	CCSGG	2 cut(s)	44, 822
Bsa29I	ATCGAT	1 cut(s)	1401
BsaAI	YACGTR	1 cut(s)	214
BsaBI	GATNNNNATC	1 cut(s)	803
BsaHI	GRCGYC	5 cut(s)	284, 324, 543, 698, 1680
BsaWI	WCCGGW	5 cut(s)	11, 21, 503, 513, 565
BsaXI	ACNNNNNCTCC	2 cut(s)	503, 533
Bsc4I	CCNNNNNNNGG	8 cut(s)	28, 274, 402, 977, 1099, 1498, 1643, 1676
Bse118I	RCCGGY	3 cut(s)	11, 1088, 1618
Bse1I	ACTGG	2 cut(s)	152, 1560
Bse3DI	GCAATG	2 cut(s)	1324, 1426
Bse8I	GATNNNNATC	1 cut(s)	803
BseBI	CCWGG	3 cut(s)	485, 764, 1094
BseCI	ATCGAT	1 cut(s)	1401
BseGI	GGATG	1 cut(s)	1783
BseJI	GATNNNNATC	1 cut(s)	803
BseLI	CCNNNNNNNGG	8 cut(s)	28, 274, 402, 977, 1099, 1498, 1643, 1676
BseMI	GCAATG	2 cut(s)	1324, 1426
BseMII	CTCAG	5 cut(s)	296, 445, 547, 920, 1289
BseNI	ACTGG	2 cut(s)	152, 1560
BseRI	GAGGAG	3 cut(s)	153, 1699, 1727
BseSI	GKGCMC	2 cut(s)	210, 258
BseX3I	CGGCCG	2 cut(s)	276, 630
BsgI	GTGCAG	3 cut(s)	401, 455, 957
Bsh1236I	CGCG	7 cut(s)	227, 242, 281, 752, 949, 1347, 1639
Bsh1285I	CGRYCG	2 cut(s)	279, 633
BshNI	GGYRCC	3 cut(s)	205, 283, 602
BshTI	ACCGGT	1 cut(s)	11
BshVI	ATCGAT	1 cut(s)	1401
BsiEI	CGRYCG	2 cut(s)	279, 633
BsiHKAI	GWGCWC	3 cut(s)	258, 521, 760
BsiHKCI	CYCGRG	4 cut(s)	291, 961, 1060, 1594
BsiWI	CGTACG	1 cut(s)	231
BslFI	GGGAC	2 cut(s)	1566, 1655
BslI	CCNNNNNNNGG	8 cut(s)	28, 274, 402, 977, 1099, 1498, 1643, 1676
BsmAI	GTCTC	3 cut(s)	689, 736, 1008
BsmBI	CGTCTC	1 cut(s)	689
BsmFI	GGGAC	2 cut(s)	1566, 1655
BsmI	GAATGC	1 cut(s)	1320
BsoBI	CYCGRG	4 cut(s)	291, 961, 1060, 1594
Bsp1286I	GDGCHC	4 cut(s)	210, 258, 521, 760
Bsp68I	TCGCGA	1 cut(s)	1347
BspCNI	CTCAG	5 cut(s)	297, 444, 546, 919, 1290
BspDI	ATCGAT	1 cut(s)	1401
BspFNI	CGCG	7 cut(s)	227, 242, 281, 752, 949, 1347, 1639
BspLI	GGNNCC	6 cut(s)	42, 207, 285, 551, 604, 1662
BspMAI	CTGCAG	1 cut(s)	1125
BspMI	ACCTGC	1 cut(s)	358
BspPI	GGATC	5 cut(s)	259, 413, 523, 1232, 1614
BspT107I	GGYRCC	3 cut(s)	205, 283, 602
BsrBI	CCGCTC	1 cut(s)	391
BsrDI	GCAATG	2 cut(s)	1324, 1426
BsrFI	RCCGGY	3 cut(s)	11, 1088, 1618
BsrI	ACTGG	2 cut(s)	152, 1560
BssAI	RCCGGY	3 cut(s)	11, 1088, 1618
BssNI	GRCGYC	5 cut(s)	284, 324, 543, 698, 1680
BssT1I	CCWWGG	4 cut(s)	450, 598, 1112, 1145
Bst2UI	CCWGG	3 cut(s)	485, 764, 1094
Bst4CI	ACNGT	5 cut(s)	219, 415, 526, 1283, 1796
Bst6I	CTCTTC	1 cut(s)	1157
BstACI	GRCGYC	5 cut(s)	284, 324, 543, 698, 1680
BstAPI	GCANNNNNTGC	1 cut(s)	1326
BstBAI	YACGTR	1 cut(s)	214
BstC8I	GCNNGC	7 cut(s)	438, 490, 940, 944, 1172, 1304, 1649
BstDEI	CTNAG	6 cut(s)	305, 431, 533, 906, 1077, 1298
BstDSI	CCRYGG	3 cut(s)	225, 279, 1637
BstEII	GGTNACC	1 cut(s)	1052
BstF5I	GGATG	1 cut(s)	1783
BstFNI	CGCG	7 cut(s)	227, 242, 281, 752, 949, 1347, 1639
BstH2I	RGCGCY	3 cut(s)	287, 299, 878
BstHHI	GCGC	4 cut(s)	242, 286, 298, 877
BstMAI	GTCTC	3 cut(s)	689, 736, 1008
BstMCI	CGRYCG	2 cut(s)	279, 633
BstNI	CCWGG	3 cut(s)	485, 764, 1094
BstNSI	RCATGY	3 cut(s)	440, 478, 1306
BstPI	GGTNACC	1 cut(s)	1052
BstSCI	CCNGG	5 cut(s)	42, 483, 762, 820, 1092
BstSFI	CTRYAG	2 cut(s)	1121, 1795
BstSLI	GKGCMC	2 cut(s)	210, 258
BstSNI	TACGTA	1 cut(s)	214
BstUI	CGCG	7 cut(s)	227, 242, 281, 752, 949, 1347, 1639
BstV2I	GAAGAC	1 cut(s)	1365
BstXI	CCANNNNNNTGG	1 cut(s)	671
BstZI	CGGCCG	2 cut(s)	276, 630
Bsu15I	ATCGAT	1 cut(s)	1401
BsuTUI	ATCGAT	1 cut(s)	1401
BtgI	CCRYGG	3 cut(s)	225, 279, 1637
BtgZI	GCGATG	1 cut(s)	1368
BtsCI	GGATG	1 cut(s)	1783
BtsI	GCAGTG	2 cut(s)	861, 1315
BtsIMutI	CAGTG	4 cut(s)	861, 940, 1315, 1792
BtuMI	TCGCGA	1 cut(s)	1347
BveI	ACCTGC	1 cut(s)	358
Cac8I	GCNNGC	7 cut(s)	438, 490, 940, 944, 1172, 1304, 1649
CaiI	CAGNNNCTG	2 cut(s)	1291, 1555
CfoI	GCGC	4 cut(s)	242, 286, 298, 877
Cfr10I	RCCGGY	3 cut(s)	11, 1088, 1618
Cfr42I	CCGCGG	3 cut(s)	228, 282, 1640
ClaI	ATCGAT	1 cut(s)	1401
CseI	GACGC	2 cut(s)	706, 1669
Csp6I	GTAC	4 cut(s)	155, 215, 232, 1279
CspAI	ACCGGT	1 cut(s)	11
CspCI	CAANNNNNGTGG	2 cut(s)	1478, 1513
CviAII	CATG	9 cut(s)	437, 475, 995, 1219, 1303, 1444, 1464, 1766, 1774
CviQI	GTAC	4 cut(s)	155, 215, 232, 1279
DdeI	CTNAG	6 cut(s)	305, 431, 533, 906, 1077, 1298
DinI	GGCGCC	1 cut(s)	285
DraIII	CACNNNGTG	1 cut(s)	559
EaeI	YGGCCR	5 cut(s)	276, 453, 630, 919, 1090
EagI	CGGCCG	2 cut(s)	276, 630
Eam1104I	CTCTTC	1 cut(s)	1157
EarI	CTCTTC	1 cut(s)	1157
EciI	GGCGGA	4 cut(s)	156, 1028, 1122, 1702
Ecl136II	GAGCTC	2 cut(s)	519, 758
EclXI	CGGCCG	2 cut(s)	276, 630
Eco105I	TACGTA	1 cut(s)	214
Eco130I	CCWWGG	4 cut(s)	450, 598, 1112, 1145
Eco147I	AGGCCT	1 cut(s)	449
Eco24I	GRGCYC	2 cut(s)	521, 760
Eco32I	GATATC	1 cut(s)	1216
Eco47I	GGWCC	5 cut(s)	40, 393, 506, 568, 1660
Eco52I	CGGCCG	2 cut(s)	276, 630
Eco53kI	GAGCTC	2 cut(s)	519, 758
Eco88I	CYCGRG	4 cut(s)	291, 961, 1060, 1594
Eco91I	GGTNACC	1 cut(s)	1052
EcoICRI	GAGCTC	2 cut(s)	519, 758
EcoO65I	GGTNACC	1 cut(s)	1052
EcoRI	GAATTC	2 cut(s)	56, 847
EcoRII	CCWGG	3 cut(s)	483, 762, 1092
EcoRV	GATATC	1 cut(s)	1216
EcoT14I	CCWWGG	4 cut(s)	450, 598, 1112, 1145
EcoT38I	GRGCYC	2 cut(s)	521, 760
EgeI	GGCGCC	1 cut(s)	285
EheI	GGCGCC	1 cut(s)	285
ErhI	CCWWGG	4 cut(s)	450, 598, 1112, 1145
Esp3I	CGTCTC	1 cut(s)	689
FaeI	CATG	9 cut(s)	440, 478, 998, 1222, 1306, 1447, 1467, 1769, 1777
FaqI	GGGAC	2 cut(s)	1566, 1655
FatI	CATG	9 cut(s)	436, 474, 994, 1218, 1302, 1443, 1463, 1765, 1773
FauI	CCCGC	4 cut(s)	232, 276, 497, 1632
FbaI	TGATCA	2 cut(s)	1203, 1257
FblI	GTMKAC	1 cut(s)	1784
FokI	GGATG	1 cut(s)	1790
FriOI	GRGCYC	2 cut(s)	521, 760
FspBI	CTAG	3 cut(s)	872, 1146, 1542
GlaI	GCGC	4 cut(s)	241, 285, 297, 876
GsuI	CTGGAG	3 cut(s)	374, 746, 1498
HaeII	RGCGCY	3 cut(s)	287, 299, 878
HgaI	GACGC	2 cut(s)	706, 1669
HhaI	GCGC	4 cut(s)	242, 286, 298, 877
Hin1I	GRCGYC	5 cut(s)	284, 324, 543, 698, 1680
Hin1II	CATG	9 cut(s)	440, 478, 998, 1222, 1306, 1447, 1467, 1769, 1777
Hin6I	GCGC	4 cut(s)	240, 284, 296, 875
HinP1I	GCGC	4 cut(s)	240, 284, 296, 875
HincII	GTYRAC	1 cut(s)	1785
HindII	GTYRAC	1 cut(s)	1785
HindIII	AAGCTT	1 cut(s)	666
HphI	GGTGA	8 cut(s)	122, 213, 256, 346, 382, 1064, 1525, 1715
Hpy166II	GTNNAC	5 cut(s)	256, 571, 1441, 1629, 1785
Hpy188I	TCNGA	5 cut(s)	345, 909, 1203, 1287, 1338
Hpy8I	GTNNAC	5 cut(s)	256, 571, 1441, 1629, 1785
HpyAV	CCTTC	6 cut(s)	439, 676, 772, 1059, 1492, 1561
HpyCH4III	ACNGT	5 cut(s)	219, 415, 526, 1283, 1796
HpyCH4IV	ACGT	5 cut(s)	213, 234, 324, 543, 659
HpyF3I	CTNAG	6 cut(s)	305, 431, 533, 906, 1077, 1298
HpySE526I	ACGT	5 cut(s)	213, 234, 324, 543, 659
Hsp92I	GRCGYC	5 cut(s)	284, 324, 543, 698, 1680
Hsp92II	CATG	9 cut(s)	440, 478, 998, 1222, 1306, 1447, 1467, 1769, 1777
HspAI	GCGC	4 cut(s)	240, 284, 296, 875
KasI	GGCGCC	1 cut(s)	283
Ksp22I	TGATCA	2 cut(s)	1203, 1257
KspI	CCGCGG	3 cut(s)	228, 282, 1640
LmnI	GCTCC	6 cut(s)	349, 388, 506, 516, 524, 1570
LweI	GCATC	1 cut(s)	1180
MaeI	CTAG	3 cut(s)	872, 1146, 1542
MaeII	ACGT	5 cut(s)	213, 234, 324, 543, 659
MbiI	CCGCTC	1 cut(s)	391
MboII	GAAGA	9 cut(s)	718, 850, 1049, 1174, 1223, 1334, 1370, 1385, 1666
MhlI	GDGCHC	4 cut(s)	210, 258, 521, 760
Mly113I	GGCGCC	1 cut(s)	284
MlyI	GAGTC	6 cut(s)	283, 620, 1010, 1055, 1790, 1831
MmeI	TCCRAC	1 cut(s)	1708
MroXI	GAANNNNTTC	1 cut(s)	1069
MseI	TTAA	3 cut(s)	1509, 1719, 1827
MslI	CAYNNNNRTG	3 cut(s)	608, 1253, 1764
MspA1I	CMGCKG	5 cut(s)	227, 281, 834, 1120, 1639
MspR9I	CCNGG	5 cut(s)	44, 485, 764, 822, 1094
Mva1269I	GAATGC	1 cut(s)	1320
MvaI	CCWGG	3 cut(s)	485, 764, 1094
MvnI	CGCG	7 cut(s)	227, 242, 281, 752, 949, 1347, 1639
NarI	GGCGCC	1 cut(s)	284
NciI	CCSGG	2 cut(s)	44, 822
NlaIII	CATG	9 cut(s)	440, 478, 998, 1222, 1306, 1447, 1467, 1769, 1777
NlaIV	GGNNCC	6 cut(s)	42, 207, 285, 551, 604, 1662
NmeAIII	GCCGAG	3 cut(s)	76, 481, 608
NmuCI	GTSAC	9 cut(s)	219, 244, 320, 334, 409, 634, 1052, 1531, 1654
NruI	TCGCGA	1 cut(s)	1347
NspI	RCATGY	3 cut(s)	440, 478, 1306
OliI	CACNNNNGTG	1 cut(s)	608
PaeI	GCATGC	2 cut(s)	440, 1306
PaeR7I	CTCGAG	2 cut(s)	961, 1060
PaqCI	CACCTGC	1 cut(s)	358
PceI	AGGCCT	1 cut(s)	449
PcsI	WCGNNNNNNNCGW	5 cut(s)	630, 1592, 1839, 1842, 1845
PctI	GAATGC	1 cut(s)	1320
PdmI	GAANNNNTTC	1 cut(s)	1069
PfeI	GAWTC	5 cut(s)	340, 460, 562, 1226, 1339
Pfl23II	CGTACG	1 cut(s)	231
PflFI	GACNNNGTC	1 cut(s)	700
PflMI	CCANNNNNTGG	1 cut(s)	1099
PfoI	TCCNGGA	1 cut(s)	762
PinAI	ACCGGT	1 cut(s)	11
PleI	GAGTC	6 cut(s)	283, 620, 1009, 1054, 1789, 1830
PluTI	GGCGCC	1 cut(s)	287
PpsI	GAGTC	6 cut(s)	283, 620, 1009, 1054, 1789, 1830
Ppu21I	YACGTR	1 cut(s)	214
PshBI	ATTAAT	1 cut(s)	1719
Psp124BI	GAGCTC	2 cut(s)	521, 760
Psp1406I	AACGTT	1 cut(s)	659
Psp6I	CCWGG	3 cut(s)	483, 762, 1092
PspEI	GGTNACC	1 cut(s)	1052
PspGI	CCWGG	3 cut(s)	483, 762, 1092
PspLI	CGTACG	1 cut(s)	231
PspN4I	GGNNCC	6 cut(s)	42, 207, 285, 551, 604, 1662
PspXI	VCTCGAGB	1 cut(s)	961
PstI	CTGCAG	1 cut(s)	1125
PstNI	CAGNNNCTG	2 cut(s)	1291, 1555
PsyI	GACNNNGTC	1 cut(s)	700
PvuII	CAGCTG	2 cut(s)	834, 1120
RruI	TCGCGA	1 cut(s)	1347
RsaI	GTAC	4 cut(s)	156, 216, 233, 1280
RsaNI	GTAC	4 cut(s)	155, 215, 232, 1279
RseI	CAYNNNNRTG	3 cut(s)	608, 1253, 1764
SacI	GAGCTC	2 cut(s)	521, 760
SacII	CCGCGG	3 cut(s)	228, 282, 1640
SalI	GTCGAC	1 cut(s)	1783
SaqAI	TTAA	3 cut(s)	1509, 1719, 1827
SchI	GAGTC	6 cut(s)	283, 620, 1010, 1055, 1790, 1831
ScrFI	CCNGG	5 cut(s)	44, 485, 764, 822, 1094
SduI	GDGCHC	4 cut(s)	210, 258, 521, 760
SfaNI	GCATC	1 cut(s)	1180
SfcI	CTRYAG	2 cut(s)	1121, 1795
SfoI	GGCGCC	1 cut(s)	285
Sfr274I	CTCGAG	2 cut(s)	961, 1060
Sfr303I	CCGCGG	3 cut(s)	228, 282, 1640
SgrBI	CCGCGG	3 cut(s)	228, 282, 1640
SinI	GGWCC	5 cut(s)	40, 393, 506, 568, 1660
SlaI	CTCGAG	2 cut(s)	961, 1060
SmiMI	CAYNNNNRTG	3 cut(s)	608, 1253, 1764
SmlI	CTYRAG	2 cut(s)	961, 1060
SmoI	CTYRAG	2 cut(s)	961, 1060
SnaBI	TACGTA	1 cut(s)	214
SphI	GCATGC	2 cut(s)	440, 1306
SseBI	AGGCCT	1 cut(s)	449
SspDI	GGCGCC	1 cut(s)	283
SspMI	CTAG	3 cut(s)	872, 1146, 1542
SstI	GAGCTC	2 cut(s)	521, 760
StuI	AGGCCT	1 cut(s)	449
StyD4I	CCNGG	5 cut(s)	42, 483, 762, 820, 1092
StyI	CCWWGG	4 cut(s)	450, 598, 1112, 1145
TaaI	ACNGT	5 cut(s)	219, 415, 526, 1283, 1796
TaiI	ACGT	5 cut(s)	216, 237, 327, 546, 662
TatI	WGTACW	1 cut(s)	1278
TauI	GCSGC	9 cut(s)	230, 281, 284, 752, 880, 949, 1636, 1639, 1815
TfiI	GAWTC	5 cut(s)	340, 460, 562, 1226, 1339
Tru1I	TTAA	3 cut(s)	1509, 1719, 1827
Tru9I	TTAA	3 cut(s)	1509, 1719, 1827
TscAI	CASTG	4 cut(s)	868, 940, 1322, 1799
TseFI	GTSAC	9 cut(s)	219, 244, 320, 334, 409, 634, 1052, 1531, 1654
Tsp45I	GTSAC	9 cut(s)	219, 244, 320, 334, 409, 634, 1052, 1531, 1654
TspDTI	ATGAA	5 cut(s)	203, 785, 1313, 1371, 1375
TspGWI	ACGGA	3 cut(s)	485, 603, 1673
TspRI	CASTG	4 cut(s)	868, 940, 1322, 1799
Tth111I	GACNNNGTC	1 cut(s)	700
Van91I	CCANNNNNTGG	1 cut(s)	1099
VneI	GTGCAC	1 cut(s)	254
VpaK11BI	GGWCC	5 cut(s)	40, 393, 506, 568, 1660
VspI	ATTAAT	1 cut(s)	1719
XapI	RAATTY	6 cut(s)	56, 719, 782, 847, 1021, 1184
XceI	RCATGY	3 cut(s)	440, 478, 1306
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1461
XhoI	CTCGAG	2 cut(s)	961, 1060
XmaJI	CCTAGG	1 cut(s)	1145
XmiI	GTMKAC	1 cut(s)	1784
XmnI	GAANNNNTTC	1 cut(s)	1069
XspI	CTAG	3 cut(s)	872, 1146, 1542
ZraI	GACGTC	2 cut(s)	325, 544

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.