Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0009258

Physical Location & Seq

Genomic Coordinates Forward (+)

29936663 .. 29939333

Gene Structure 2671 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00239560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGGCTGAAACCGGTTTTGTCCTGTTTCCGGGTGGCCTGGACCCGGGAGCCGAGGAGTTAAGGCCCAGAAACTCGAACCCGATACCCCTATTCAGCCCACCACCGCCTCTGCCGCACCAAGTTTACTATCCCTACCCACCGCCACCACCACCGCCCATGAACGAACTGGTGGCGGTGCCCTACGTGCCGTCACCCACGGCGTACGTTAGCGCGGTGACGGTGCAGGCCCCGATCCCGCCTCTGGCCGGGGGCCGACTCGAGCGCCCCGACGTGTGGGCCCACTTCGTGATTCCGGTGCACACGGCAATCCCCGACGGCCACAACCAAGGCACCATCGTGATTTTCAATCTCGACTTGGCGGTGACCACCTCCAGCGTCAGGCAGACGTTCCAAGCTTTTGGTGCTGTGAAGGAATTGAGGGAGACCCCCTCGAAGAAGCACCAGAAATTCGTGGAGTTTTTCGATGTCAGACACGCTGCTAGAGCTCTCAAGGAGATGAACGGGAAGGAGATCCATGGCAAACAGATTGTGATCGAGTTCGGTCGCCCCGGAGGCAACAGCTGGAAGAAGCTGAATTCTCTCACCACCACTGCCGTCCCAACTGTCGTCTCTGCCAATGTTGCTTCGCCCGAGTTATATCTGCCCGAACCCTTCTCCTCCGGGCACTCTCGTTTCAATGCAGTCTCGCCGCTAATGTATGGTTCACAAGGCCAGTTTTCGAGTAGGACTAATTCGGCAAGTGGAAATGTTGGTGTCGAGTCTCTAGTGGCGGAGTTGAATGTGGGCGGTGGAATTGAAGAGAGGGAGTCAGTGGGGCATTCGAGAAGGGCTTCGTCGAAGAAGCAAAGCAGCCAGGCAATGGTAACAAGTCCAAGGATGCCGCCGCCACCGCCGCCAAGGAGTAGTAAGGGAAAGAGAGGAAAGCAGCCCAAGAAGTATGATACTCGCTTTCTAATCAAAGATGTCATGGTTGAATCCACAAGCGATTCAAGAACCACTCTGATGATAAAAAACATACCGAACAAATACAGTCAGAAGCTGCTATTGAGTATGCTGGACAACCACTGCATTCACTGCAACGAACAGATTCTTCGCGACGGCGATGAAGACCAGCCTTTGTCCTCCTACGATTTCGTTTATCTGCCCATTGATTTCAATAACAAATGCAACGTAGGTTATGGGTTTGTGAACACGACAAGCCCAGAGGCAACATGGAGGCTTTACAAAGCCTTTCATCACCAAAACTGGGAGGTCTTCAACTCCAGAAAAATCTGTGAAGTCACCTACGCAAGAGTTCAGGCACGCATTATTAAGTTTCTTCTTAACTCGTTGAAGGATCACTTAAAGAACTCGAAGCTCCCGAGCGAAATGGATCACTACTTGCCGGTTGTGTTTACGCCGCCCCGGGATGGCAAGCGTCTGACGGATCCACTCCCCCATCTTCGGCATCCAACACAAGTGCGGCAGCAACTCCTCCGCCGCCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_2

Protein Analysis

495

Amino Acids

55.3

Weight (kDa)

9.57

Isoelectric Point (pI)

53.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	112 - 176	1.7e-10	RNA recognition motif
RRM_2	PF04059	331 - 435	1.3e-29	RNA recognition motif 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26120
fragaria_vesca	FvH4_4g25250 FvH4_4g25250 FvH4_4g25250
malus_domestica	MD13G1105600.v1.1 MD16G1105800.v1.1
prunus_persica	Prupe.1G240800_v2.0.a1 Prupe.1G240800_v2.0.a1
pyrus_communis	pycom13g09160
rosa_chinensis	RchiOBHm_Chr4g0432441
rosa_laevigata	RLG00000006842
rosa_multiflora	Rmu_co8411925.1_g000001 Rmu_sc0001084.1_g000018 Rmu_sc0038130.1_g000001
rosa_roxburghii	Rroxscaffold_3G00239560 Rroxscaffold_5G00373920
rosa_rugosa	Rorug04G0259000
rosa_samantha	Rh4AG314300 Rh4BG322100 Rh4CG337200 Rh4DG317800
rosa_wichuraiana	Rw4G027330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	175, 329
AccB7I	CCANNNNNTGG	1 cut(s)	859
AccII	CGCG	2 cut(s)	212, 1095
AclWI	GGATC	6 cut(s)	226, 505, 1344, 1380, 1421, 1434
AcoI	YGGCCR	2 cut(s)	243, 316
AcsI	RAATTY	2 cut(s)	446, 574
AdeI	CACNNNGTG	1 cut(s)	286
AfaI	GTAC	1 cut(s)	203
AflIII	ACRYGT	1 cut(s)	270
AgeI	ACCGGT	1 cut(s)	11
AgsI	TTSAA	9 cut(s)	346, 676, 778, 797, 974, 990, 1156, 1258, 1333
AjiI	CACGTC	1 cut(s)	271
AjnI	CCWGG	2 cut(s)	36, 852
AleI	CACNNNNGTG	1 cut(s)	335
AluBI	AGCT	6 cut(s)	395, 485, 561, 571, 1039, 1357
AluI	AGCT	6 cut(s)	395, 485, 561, 571, 1039, 1357
Alw21I	GWGCWC	2 cut(s)	300, 487
Alw26I	GTCTC	4 cut(s)	416, 613, 688, 765
Alw44I	GTGCAC	1 cut(s)	296
AlwI	GGATC	6 cut(s)	226, 505, 1344, 1380, 1421, 1434
AlwNI	CAGNNNCTG	1 cut(s)	1039
Ama87I	CYCGRG	5 cut(s)	43, 257, 629, 1360, 1404
AoxI	GGCC	8 cut(s)	34, 62, 225, 243, 250, 276, 316, 709
ApaI	GGGCCC	1 cut(s)	280
ApaLI	GTGCAC	1 cut(s)	296
ApeKI	GCWGC	5 cut(s)	476, 849, 925, 1039, 1465
ApoI	RAATTY	2 cut(s)	446, 574
AsiGI	ACCGGT	1 cut(s)	11
Asp700I	GAANNNNTTC	2 cut(s)	829, 1086
AspLEI	GCGC	2 cut(s)	212, 264
AspS9I	GGNCC	6 cut(s)	40, 63, 226, 250, 276, 277
AsuC2I	CCSGG	8 cut(s)	30, 44, 45, 247, 549, 661, 1405, 1406
AsuHPI	GGTGA	6 cut(s)	183, 226, 373, 574, 1229, 1273
AvaI	CYCGRG	5 cut(s)	43, 257, 629, 1360, 1404
AvaII	GGWCC	1 cut(s)	40
BaeGI	GKGCMC	4 cut(s)	180, 280, 300, 666
BamHI	GGATCC	1 cut(s)	1426
BanI	GGYRCC	2 cut(s)	175, 329
BanII	GRGCYC	2 cut(s)	280, 487
BbsI	GAAGAC	2 cut(s)	1113, 1246
Bbv12I	GWGCWC	2 cut(s)	300, 487
BbvI	GCAGC	5 cut(s)	463, 861, 937, 1026, 1477
BccI	CCATC	3 cut(s)	341, 1403, 1446
BceAI	ACGGC	7 cut(s)	172, 213, 318, 331, 578, 1114, 1467
BciT130I	CCWGG	2 cut(s)	38, 854
BcnI	CCSGG	8 cut(s)	30, 44, 45, 247, 549, 661, 1405, 1406
BcoDI	GTCTC	4 cut(s)	416, 613, 688, 765
BfaI	CTAG	2 cut(s)	480, 764
BfoI	RGCGCY	1 cut(s)	265
BglI	GCCNNNNNGGC	1 cut(s)	552
Bme18I	GGWCC	1 cut(s)	40
BmeT110I	CYCGRG	5 cut(s)	43, 257, 629, 1360, 1404
BmgBI	CACGTC	1 cut(s)	271
BmgT120I	GGNCC	6 cut(s)	40, 63, 226, 250, 276, 277
BmiI	GGNNCC	8 cut(s)	42, 49, 177, 228, 251, 278, 331, 1428
BmrI	ACTGGG	1 cut(s)	1255
BmsI	GCATC	2 cut(s)	867, 1456
BmuI	ACTGGG	1 cut(s)	1255
BpiI	GAAGAC	2 cut(s)	1113, 1246
BplI	GAGNNNNNCTC	2 cut(s)	413, 445
BpmI	CTGGAG	2 cut(s)	355, 1246
BpuEI	CTTGAG	1 cut(s)	473
BpuMI	CCSGG	8 cut(s)	30, 44, 45, 247, 549, 661, 1405, 1406
BsaAI	YACGTR	1 cut(s)	184
BsaBI	GATNNNNATC	1 cut(s)	530
BsaI	GGTCTC	1 cut(s)	416
BsaWI	WCCGGW	2 cut(s)	11, 292
Bse118I	RCCGGY	2 cut(s)	11, 1384
Bse1I	ACTGG	3 cut(s)	171, 712, 1250
Bse3DI	GCAATG	1 cut(s)	864
Bse8I	GATNNNNATC	1 cut(s)	530
BseBI	CCWGG	2 cut(s)	38, 854
BseGI	GGATG	3 cut(s)	882, 1414, 1447
BseJI	GATNNNNATC	1 cut(s)	530
BseMI	GCAATG	1 cut(s)	864
BseNI	ACTGG	3 cut(s)	171, 712, 1250
BseRI	GAGGAG	3 cut(s)	68, 646, 1463
BseSI	GKGCMC	4 cut(s)	180, 280, 300, 666
BseXI	GCAGC	5 cut(s)	463, 861, 937, 1026, 1477
BsgI	GTGCAG	1 cut(s)	242
Bsh1236I	CGCG	2 cut(s)	212, 1095
Bsh1285I	CGRYCG	1 cut(s)	544
BshFI	GGCC	8 cut(s)	36, 64, 227, 245, 252, 278, 318, 711
BshNI	GGYRCC	2 cut(s)	175, 329
BshTI	ACCGGT	1 cut(s)	11
BsiEI	CGRYCG	1 cut(s)	544
BsiHKAI	GWGCWC	2 cut(s)	300, 487
BsiHKCI	CYCGRG	5 cut(s)	43, 257, 629, 1360, 1404
BsiSI	CCGG	9 cut(s)	12, 29, 44, 246, 293, 549, 660, 1385, 1405
BsiWI	CGTACG	1 cut(s)	201
BslFI	GGGAC	1 cut(s)	581
BsmAI	GTCTC	4 cut(s)	416, 613, 688, 765
BsmBI	CGTCTC	1 cut(s)	613
BsmFI	GGGAC	1 cut(s)	581
BsmI	GAATGC	2 cut(s)	817, 1068
BsnI	GGCC	8 cut(s)	36, 64, 227, 245, 252, 278, 318, 711
Bso31I	GGTCTC	1 cut(s)	416
BsoBI	CYCGRG	5 cut(s)	43, 257, 629, 1360, 1404
Bsp120I	GGGCCC	1 cut(s)	276
Bsp1286I	GDGCHC	5 cut(s)	180, 280, 300, 487, 666
Bsp143I	GATC	6 cut(s)	231, 510, 531, 1336, 1372, 1426
Bsp19I	CCATGG	1 cut(s)	514
Bsp68I	TCGCGA	1 cut(s)	1095
BspANI	GGCC	8 cut(s)	36, 64, 227, 245, 252, 278, 318, 711
BspFNI	CGCG	2 cut(s)	212, 1095
BspLI	GGNNCC	8 cut(s)	42, 49, 177, 228, 251, 278, 331, 1428
BspPI	GGATC	6 cut(s)	226, 505, 1344, 1380, 1421, 1434
BspT107I	GGYRCC	2 cut(s)	175, 329
BspTNI	GGTCTC	1 cut(s)	416
BsrDI	GCAATG	1 cut(s)	864
BsrFI	RCCGGY	2 cut(s)	11, 1384
BsrI	ACTGG	3 cut(s)	171, 712, 1250
BssAI	RCCGGY	2 cut(s)	11, 1384
BssMI	GATC	6 cut(s)	231, 510, 531, 1336, 1372, 1426
BssT1I	CCWWGG	4 cut(s)	325, 514, 872, 896
Bst2UI	CCWGG	2 cut(s)	38, 854
Bst4CI	ACNGT	3 cut(s)	220, 604, 1031
Bst6I	CTCTTC	1 cut(s)	792
BstAPI	GCANNNNNTGC	1 cut(s)	1074
BstBAI	YACGTR	1 cut(s)	184
BstC8I	GCNNGC	3 cut(s)	225, 1303, 1415
BstDSI	CCRYGG	2 cut(s)	195, 514
BstEII	GGTNACC	1 cut(s)	361
BstF5I	GGATG	3 cut(s)	882, 1414, 1447
BstFNI	CGCG	2 cut(s)	212, 1095
BstH2I	RGCGCY	1 cut(s)	265
BstHHI	GCGC	2 cut(s)	212, 264
BstKTI	GATC	6 cut(s)	234, 513, 534, 1339, 1375, 1429
BstMAI	GTCTC	4 cut(s)	416, 613, 688, 765
BstMBI	GATC	6 cut(s)	231, 510, 531, 1336, 1372, 1426
BstMCI	CGRYCG	1 cut(s)	544
BstMWI	GCNNNNNNNGC	9 cut(s)	112, 184, 401, 482, 552, 620, 889, 892, 1074
BstNI	CCWGG	2 cut(s)	38, 854
BstPI	GGTNACC	1 cut(s)	361
BstSLI	GKGCMC	4 cut(s)	180, 280, 300, 666
BstUI	CGCG	2 cut(s)	212, 1095
BstV1I	GCAGC	5 cut(s)	463, 861, 937, 1026, 1477
BstV2I	GAAGAC	2 cut(s)	1113, 1246
BstX2I	RGATCY	2 cut(s)	510, 1426
BstXI	CCANNNNNNTGG	1 cut(s)	398
BstYI	RGATCY	2 cut(s)	510, 1426
BsuRI	GGCC	8 cut(s)	36, 64, 227, 245, 252, 278, 318, 711
BtgI	CCRYGG	2 cut(s)	195, 514
BtgZI	GCGATG	1 cut(s)	1116
BtrI	CACGTC	1 cut(s)	271
BtsCI	GGATG	3 cut(s)	882, 1414, 1447
BtsI	GCAGTG	3 cut(s)	588, 1063, 1072
BtsIMutI	CAGTG	4 cut(s)	588, 816, 1063, 1072
BtuMI	TCGCGA	1 cut(s)	1095
Cac8I	GCNNGC	3 cut(s)	225, 1303, 1415
CaiI	CAGNNNCTG	1 cut(s)	1039
CfoI	GCGC	2 cut(s)	212, 264
Cfr10I	RCCGGY	2 cut(s)	11, 1384
Cfr13I	GGNCC	6 cut(s)	40, 63, 226, 250, 276, 277
Cfr9I	CCCGGG	2 cut(s)	43, 1404
CseI	GACGC	2 cut(s)	364, 1406
Csp6I	GTAC	1 cut(s)	202
CspAI	ACCGGT	1 cut(s)	11
CviAII	CATG	4 cut(s)	157, 515, 967, 1212
CviQI	GTAC	1 cut(s)	202
DpnI	GATC	6 cut(s)	233, 512, 533, 1338, 1374, 1428
DpnII	GATC	6 cut(s)	231, 510, 531, 1336, 1372, 1426
DraIII	CACNNNGTG	1 cut(s)	286
EaeI	YGGCCR	2 cut(s)	243, 316
Eam1104I	CTCTTC	1 cut(s)	792
EarI	CTCTTC	1 cut(s)	792
EciI	GGCGGA	2 cut(s)	785, 1466
Ecl136II	GAGCTC	1 cut(s)	485
Eco130I	CCWWGG	4 cut(s)	325, 514, 872, 896
Eco24I	GRGCYC	2 cut(s)	280, 487
Eco31I	GGTCTC	1 cut(s)	416
Eco47I	GGWCC	1 cut(s)	40
Eco53kI	GAGCTC	1 cut(s)	485
Eco88I	CYCGRG	5 cut(s)	43, 257, 629, 1360, 1404
Eco91I	GGTNACC	1 cut(s)	361
EcoICRI	GAGCTC	1 cut(s)	485
EcoO109I	RGGNCCY	1 cut(s)	226
EcoO65I	GGTNACC	1 cut(s)	361
EcoRI	GAATTC	1 cut(s)	574
EcoRII	CCWGG	2 cut(s)	36, 852
EcoT14I	CCWWGG	4 cut(s)	325, 514, 872, 896
EcoT38I	GRGCYC	2 cut(s)	280, 487
ErhI	CCWWGG	4 cut(s)	325, 514, 872, 896
Esp3I	CGTCTC	1 cut(s)	613
FaeI	CATG	4 cut(s)	160, 518, 970, 1215
FalI	AAGNNNNNCTT	2 cut(s)	1325, 1357
FaqI	GGGAC	1 cut(s)	581
FatI	CATG	4 cut(s)	156, 514, 966, 1211
FauI	CCCGC	1 cut(s)	243
FokI	GGATG	3 cut(s)	889, 1421, 1434
FriOI	GRGCYC	2 cut(s)	280, 487
FspBI	CTAG	2 cut(s)	480, 764
GlaI	GCGC	2 cut(s)	211, 263
GsuI	CTGGAG	2 cut(s)	355, 1246
HaeII	RGCGCY	1 cut(s)	265
HaeIII	GGCC	8 cut(s)	36, 64, 227, 245, 252, 278, 318, 711
HapII	CCGG	9 cut(s)	12, 29, 44, 246, 293, 549, 660, 1385, 1405
HgaI	GACGC	2 cut(s)	364, 1406
HhaI	GCGC	2 cut(s)	212, 264
Hin1II	CATG	4 cut(s)	160, 518, 970, 1215
Hin6I	GCGC	2 cut(s)	210, 262
HinP1I	GCGC	2 cut(s)	210, 262
HindIII	AAGCTT	1 cut(s)	393
HinfI	GANTC	7 cut(s)	255, 289, 758, 806, 974, 986, 1087
HpaII	CCGG	9 cut(s)	12, 29, 44, 246, 293, 549, 660, 1385, 1405
HphI	GGTGA	6 cut(s)	183, 226, 373, 574, 1229, 1273
Hpy166II	GTNNAC	5 cut(s)	124, 298, 704, 1189, 1395
Hpy188I	TCNGA	4 cut(s)	470, 1002, 1035, 1422
Hpy188III	TCNNGA	8 cut(s)	286, 337, 350, 822, 990, 1094, 1263, 1360
Hpy8I	GTNNAC	5 cut(s)	124, 298, 704, 1189, 1395
Hpy99I	CGWCG	4 cut(s)	272, 317, 838, 1100
HpyAV	CCTTC	5 cut(s)	403, 499, 661, 819, 1327
HpyCH4III	ACNGT	3 cut(s)	220, 604, 1031
HpyCH4IV	ACGT	5 cut(s)	183, 204, 270, 386, 1170
HpyCH4V	TGCA	6 cut(s)	223, 298, 680, 1068, 1077, 1167
HpyF10VI	GCNNNNNNNGC	9 cut(s)	112, 184, 401, 482, 552, 620, 889, 892, 1074
HpySE526I	ACGT	5 cut(s)	183, 204, 270, 386, 1170
Hsp92II	CATG	4 cut(s)	160, 518, 970, 1215
HspAI	GCGC	2 cut(s)	210, 262
Kzo9I	GATC	6 cut(s)	231, 510, 531, 1336, 1372, 1426
LmnI	GCTCC	2 cut(s)	47, 1362
Lsp1109I	GCAGC	5 cut(s)	463, 861, 937, 1026, 1477
LweI	GCATC	2 cut(s)	867, 1456
MaeI	CTAG	2 cut(s)	480, 764
MaeII	ACGT	5 cut(s)	183, 204, 270, 386, 1170
MaeIII	GTNAC	5 cut(s)	189, 214, 361, 862, 1279
MalI	GATC	6 cut(s)	233, 512, 533, 1338, 1374, 1428
MboI	GATC	6 cut(s)	231, 510, 531, 1336, 1372, 1426
MboII	GAAGA	9 cut(s)	445, 577, 809, 850, 1082, 1118, 1246, 1310, 1433
MflI	RGATCY	2 cut(s)	510, 1426
MhlI	GDGCHC	5 cut(s)	180, 280, 300, 487, 666
MluCI	AATT	5 cut(s)	413, 446, 574, 730, 792
MlyI	GAGTC	3 cut(s)	249, 767, 815
MmeI	TCCRAC	1 cut(s)	1475
MroXI	GAANNNNTTC	2 cut(s)	829, 1086
MseI	TTAA	5 cut(s)	59, 1311, 1323, 1343, 1486
MslI	CAYNNNNRTG	2 cut(s)	335, 1001
MspA1I	CMGCKG	1 cut(s)	561
MspI	CCGG	9 cut(s)	12, 29, 44, 246, 293, 549, 660, 1385, 1405
Mva1269I	GAATGC	2 cut(s)	817, 1068
MvaI	CCWGG	2 cut(s)	38, 854
MvnI	CGCG	2 cut(s)	212, 1095
MwoI	GCNNNNNNNGC	9 cut(s)	112, 184, 401, 482, 552, 620, 889, 892, 1074
NciI	CCSGG	8 cut(s)	30, 44, 45, 247, 549, 661, 1405, 1406
NcoI	CCATGG	1 cut(s)	514
NdeII	GATC	6 cut(s)	231, 510, 531, 1336, 1372, 1426
NlaIII	CATG	4 cut(s)	160, 518, 970, 1215
NlaIV	GGNNCC	8 cut(s)	42, 49, 177, 228, 251, 278, 331, 1428
NmeAIII	GCCGAG	1 cut(s)	76
NmuCI	GTSAC	4 cut(s)	189, 214, 361, 1279
NruI	TCGCGA	1 cut(s)	1095
OliI	CACNNNNGTG	1 cut(s)	335
PaeR7I	CTCGAG	1 cut(s)	257
PcsI	WCGNNNNNNNCGW	2 cut(s)	264, 1358
PctI	GAATGC	2 cut(s)	817, 1068
PdmI	GAANNNNTTC	2 cut(s)	829, 1086
PfeI	GAWTC	4 cut(s)	289, 974, 986, 1087
Pfl23II	CGTACG	1 cut(s)	201
PflMI	CCANNNNNTGG	1 cut(s)	859
PinAI	ACCGGT	1 cut(s)	11
PleI	GAGTC	3 cut(s)	249, 766, 814
PpsI	GAGTC	3 cut(s)	249, 766, 814
Ppu21I	YACGTR	1 cut(s)	184
Psp124BI	GAGCTC	1 cut(s)	487
Psp6I	CCWGG	2 cut(s)	36, 852
PspEI	GGTNACC	1 cut(s)	361
PspGI	CCWGG	2 cut(s)	36, 852
PspLI	CGTACG	1 cut(s)	201
PspN4I	GGNNCC	8 cut(s)	42, 49, 177, 228, 251, 278, 331, 1428
PspOMI	GGGCCC	1 cut(s)	276
PspPI	GGNCC	6 cut(s)	40, 63, 226, 250, 276, 277
PspXI	VCTCGAGB	1 cut(s)	257
PstNI	CAGNNNCTG	1 cut(s)	1039
PsuI	RGATCY	2 cut(s)	510, 1426
PvuII	CAGCTG	1 cut(s)	561
RruI	TCGCGA	1 cut(s)	1095
RsaI	GTAC	1 cut(s)	203
RsaNI	GTAC	1 cut(s)	202
RseI	CAYNNNNRTG	2 cut(s)	335, 1001
SacI	GAGCTC	1 cut(s)	487
SaqAI	TTAA	5 cut(s)	59, 1311, 1323, 1343, 1486
Sau3AI	GATC	6 cut(s)	231, 510, 531, 1336, 1372, 1426
Sau96I	GGNCC	6 cut(s)	40, 63, 226, 250, 276, 277
SchI	GAGTC	3 cut(s)	249, 767, 815
SduI	GDGCHC	5 cut(s)	180, 280, 300, 487, 666
SfaNI	GCATC	2 cut(s)	867, 1456
Sfr274I	CTCGAG	1 cut(s)	257
SinI	GGWCC	1 cut(s)	40
SlaI	CTCGAG	1 cut(s)	257
SmaI	CCCGGG	2 cut(s)	45, 1406
SmiMI	CAYNNNNRTG	2 cut(s)	335, 1001
SmlI	CTYRAG	2 cut(s)	257, 488
SmoI	CTYRAG	2 cut(s)	257, 488
Sse9I	AATT	5 cut(s)	413, 446, 574, 730, 792
SspMI	CTAG	2 cut(s)	480, 764
SstI	GAGCTC	1 cut(s)	487
StyI	CCWWGG	4 cut(s)	325, 514, 872, 896
TaaI	ACNGT	3 cut(s)	220, 604, 1031
TaiI	ACGT	5 cut(s)	186, 207, 273, 389, 1173
TaqII	GACCGA	1 cut(s)	530
TasI	AATT	5 cut(s)	413, 446, 574, 730, 792
TauI	GCSGC	8 cut(s)	115, 691, 883, 886, 895, 1402, 1465, 1482
TfiI	GAWTC	4 cut(s)	289, 974, 986, 1087
Tru1I	TTAA	5 cut(s)	59, 1311, 1323, 1343, 1486
Tru9I	TTAA	5 cut(s)	59, 1311, 1323, 1343, 1486
TscAI	CASTG	4 cut(s)	595, 816, 1070, 1079
TseFI	GTSAC	4 cut(s)	189, 214, 361, 1279
TseI	GCWGC	5 cut(s)	476, 849, 925, 1039, 1465
Tsp45I	GTSAC	4 cut(s)	189, 214, 361, 1279
TspDTI	ATGAA	4 cut(s)	173, 512, 1119, 1223
TspGWI	ACGGA	1 cut(s)	1439
TspMI	CCCGGG	2 cut(s)	43, 1404
TspRI	CASTG	4 cut(s)	595, 816, 1070, 1079
Van91I	CCANNNNNTGG	1 cut(s)	859
VneI	GTGCAC	1 cut(s)	296
VpaK11BI	GGWCC	1 cut(s)	40
XapI	RAATTY	2 cut(s)	446, 574
XcmI	CCANNNNNNNNNTGG	2 cut(s)	163, 1209
XhoI	CTCGAG	1 cut(s)	257
XmaI	CCCGGG	2 cut(s)	43, 1404
XmnI	GAANNNNTTC	2 cut(s)	829, 1086
XspI	CTAG	2 cut(s)	480, 764

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.