Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0009258

Physical Location & Seq

Genomic Coordinates Forward (+)

53757320 .. 53759644

Gene Structure 2325 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G027330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGCTGAAACCGGTTTCGTCCGGTTTCCGGGTGGCCTGGACCCGGGAGCCGAGGAGTTCAGGCCCAGAAACCCGAACCCGATACCCCTATTCAACCCACCACCACCACACCAAGTTTACTATCCCTACCCACCGCCACCGCCACCACCACCGCCCATGAACGAAGTGGTGGCGGTGCCCTACGTGCCGTCACCCGCGGCGTACGTTAGCGCGGTGACGGTGCAGGCCCCCATCCCGCCTCCGGCCGCGGGGCCGACTCGGGCGGTGCTGCTGAGGCCGGTGCCGTGTGACGTCAGCGAGGTGACGATTCGGCGGGAGTTGGAGGCGTTCGGGCAGGTGAGGTGGGTCCAGATGGAGAGGTCCTGCGACGGGATCGTGACCGTCCATTTCTACGATCTCAGGCATGCAGAGAAGGCCTTGGCGGAGATTCGGGACCAGCACATGCAACACCAACCGCCCACCCGCCCTCCTCGTAATTCCGGTCCGTACCACCGGAGCTCCTCCGCCGTGATTGTCAGCCCCGACGTGTGGGCCCACTTCGTGATTCCGGTGCACACCGCAATCCCCGACGGCCACAACCAAGGCACCATCGTGATTTTCAATCTTGACTCGGCGGTGACCACCTCCAGCGTCAGGCAGACGTTCCAAGCTTTTGGTGCCGTGAAGGAATTGAGGGAGACACCCTCGAAGAAGCACCAGAAATTCGTGGAGTTTTTCGATGTCAGACACGCTGCTAGAGCTCTCAAGGAGATGAACGGGAAGGAGATCCATGGCAAACAGATTGTGATCGAGTTCAGTCGCCCCGGGGGCAACAGCTGGAAGAAGCTGAATTCTCTCACCACCACTGCCGTCCCAACTGTCGTCTCTGCCAACGTTGCTTCGCCTGAGTTGTATCTGCCCGAACCCTTCTCCGGGCACTCTCGTTTCAATGCAGTCTCGCCGCTAATGTATGGTTCACAAGGCCAGTTTTCTGCTAGGACTAATTCGGGAAGTGGAAATGTTGGTGTGGAGTCTCTAGTGGCGGAGTTGAATTTGGGCGGTGGAATTGAAGAGAGGGAGTCAGTGGGGCATTCGAGAAGGGCTTCCTCGAAGAAGCAAAGCAGCCAGGCAATGGTAACAAGTCCAAGGCAGCTGCAGCTGCAGCAACCGCCGCCAACGCCACCGAGGAGTAGTAGGGGAAAGAGAGGAAAGCAGCCCAAGAAGTATGATACTCGCTTTCTAATCAAAGAAGATGTCATGGTTGAATCCACAAGCGATTCAAGAACCACTCTGATGATCAAAAACATACCGAACAAATACAGTCAGAAGCTGCTATTGAGTATGCTGGACAACCACTGCATTCACTGCAACGAACAGATTCTTCGCGACGGCGATGAAGACCAGCCTTTGTCCTCCTACGATTTCGTTTATCTCCCCATTGATTTCAATAACAAATGCAATGTAGGTTATGGGTTTGTGAACATGACAAGCCCAGAGGCAACATGGAGGCTTTACAAAGCCTTTCATCACCAAAATTGGGAGGTCTTCAATTCCAGAAAGATCTGTGAAGTCACCTACGCAAGAGTTCAGGGATTGGAAGCGTTGAAGGAGCACTTCAAGAACTCCAAGTTCCCGAGCGAAATGGATCACTACTTGCCGGTTGTGTTTACGCCGCCCCGGGACGGCAAGCTTCTGACGGATCCACTCCCCATCTTCGGCATCCAACACAAGTCCGGCAGCAACTCCTCCGCCGCCGTTAATCACCCCATTACTCTCCTCCTGCCTCCATCACATCAACATAACCATGATGACATGGATGACTCTGACCAGTGTAGTAGCCGTAACGGCGGCGTTCTGGGTGTTAATGACGACCAGGACGACGACGACCAAGACAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_2

Protein Analysis

625

Amino Acids

69.5

Weight (kDa)

6.95

Isoelectric Point (pI)

54.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	197 - 261	8.3e-11	RNA recognition motif
RRM_2	PF04059	421 - 533	5e-33	RNA recognition motif 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26120
fragaria_vesca	FvH4_4g25250 FvH4_4g25250 FvH4_4g25250
malus_domestica	MD13G1105600.v1.1 MD16G1105800.v1.1
prunus_persica	Prupe.1G240800_v2.0.a1 Prupe.1G240800_v2.0.a1
pyrus_communis	pycom13g09160
rosa_chinensis	RchiOBHm_Chr4g0432441
rosa_laevigata	RLG00000006842
rosa_multiflora	Rmu_co8411925.1_g000001 Rmu_sc0001084.1_g000018 Rmu_sc0038130.1_g000001
rosa_roxburghii	Rroxscaffold_3G00239560 Rroxscaffold_5G00373920
rosa_rugosa	Rorug04G0259000
rosa_samantha	Rh4AG314300 Rh4BG322100 Rh4CG337200 Rh4DG317800
rosa_wichuraiana	Rw4G027330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	325
AatII	GACGTC	1 cut(s)	294
Acc36I	ACCTGC	1 cut(s)	325
AccB1I	GGYRCC	4 cut(s)	175, 280, 584, 656
AccB7I	CCANNNNNTGG	1 cut(s)	1111
AccII	CGCG	4 cut(s)	197, 212, 248, 1365
AclI	AACGTT	1 cut(s)	873
AclWI	GGATC	5 cut(s)	380, 760, 1632, 1673, 1686
AcoI	YGGCCR	2 cut(s)	243, 571
AcsI	RAATTY	3 cut(s)	701, 829, 1030
AcyI	GRCGYC	1 cut(s)	291
AdeI	CACNNNGTG	1 cut(s)	541
AfaI	GTAC	2 cut(s)	203, 488
AflIII	ACRYGT	1 cut(s)	525
AgeI	ACCGGT	1 cut(s)	11
AjiI	CACGTC	1 cut(s)	526
AjnI	CCWGG	3 cut(s)	36, 1104, 1851
AleI	CACNNNNGTG	1 cut(s)	590
Alw21I	GWGCWC	4 cut(s)	500, 555, 742, 1593
Alw26I	GTCTC	4 cut(s)	671, 868, 940, 1017
Alw44I	GTGCAC	1 cut(s)	551
AlwI	GGATC	5 cut(s)	380, 760, 1632, 1673, 1686
AlwNI	CAGNNNCTG	1 cut(s)	1309
Ama87I	CYCGRG	5 cut(s)	43, 258, 803, 1612, 1656
ApaI	GGGCCC	1 cut(s)	535
ApaLI	GTGCAC	1 cut(s)	551
ApoI	RAATTY	3 cut(s)	701, 829, 1030
ArsI	GACNNNNNNTTYG	2 cut(s)	1218, 1250
AsiGI	ACCGGT	1 cut(s)	11
Asp700I	GAANNNNTTC	2 cut(s)	1081, 1356
AspLEI	GCGC	1 cut(s)	212
AsuC2I	CCSGG	8 cut(s)	30, 44, 45, 804, 805, 913, 1657, 1658
AsuHPI	GGTGA	9 cut(s)	183, 226, 313, 349, 628, 829, 1499, 1543, 1733
AvaI	CYCGRG	5 cut(s)	43, 258, 803, 1612, 1656
AvaII	GGWCC	5 cut(s)	40, 346, 360, 433, 482
BaeGI	GKGCMC	4 cut(s)	180, 535, 555, 918
BamHI	GGATCC	1 cut(s)	1678
BanI	GGYRCC	4 cut(s)	175, 280, 584, 656
BanII	GRGCYC	3 cut(s)	500, 535, 742
BbsI	GAAGAC	2 cut(s)	1383, 1516
Bbv12I	GWGCWC	4 cut(s)	500, 555, 742, 1593
BbvCI	CCTCAGC	1 cut(s)	272
BccI	CCATC	5 cut(s)	239, 346, 596, 1697, 1774
BciT130I	CCWGG	3 cut(s)	38, 1106, 1853
BclI	TGATCA	1 cut(s)	1275
BcnI	CCSGG	8 cut(s)	30, 44, 45, 804, 805, 913, 1657, 1658
BcoDI	GTCTC	4 cut(s)	671, 868, 940, 1017
BfaI	CTAG	4 cut(s)	735, 975, 1016, 1876
BfmI	CTRYAG	2 cut(s)	1133, 1139
BfuAI	ACCTGC	1 cut(s)	325
BglI	GCCNNNNNGGC	2 cut(s)	807, 1824
BglII	AGATCT	1 cut(s)	1539
Bme18I	GGWCC	5 cut(s)	40, 346, 360, 433, 482
BmeT110I	CYCGRG	5 cut(s)	43, 258, 803, 1612, 1656
BmgBI	CACGTC	1 cut(s)	526
BmsI	GCATC	1 cut(s)	1707
BpiI	GAAGAC	2 cut(s)	1383, 1516
BplI	GAGNNNNNCTC	2 cut(s)	668, 700
BpmI	CTGGAG	1 cut(s)	610
Bpu10I	CCTNAGC	1 cut(s)	272
BpuEI	CTTGAG	1 cut(s)	728
BpuMI	CCSGG	8 cut(s)	30, 44, 45, 804, 805, 913, 1657, 1658
BsaAI	YACGTR	1 cut(s)	184
BsaBI	GATNNNNATC	1 cut(s)	785
BsaHI	GRCGYC	1 cut(s)	291
BsaWI	WCCGGW	5 cut(s)	11, 21, 479, 492, 547
BsaXI	ACNNNNNCTCC	4 cut(s)	451, 481, 482, 512
Bse118I	RCCGGY	3 cut(s)	11, 277, 1636
Bse1I	ACTGG	2 cut(s)	964, 1807
Bse3DI	GCAATG	2 cut(s)	1116, 1444
Bse8I	GATNNNNATC	1 cut(s)	785
BseBI	CCWGG	3 cut(s)	38, 1106, 1853
BseGI	GGATG	3 cut(s)	231, 1698, 1801
BseJI	GATNNNNATC	1 cut(s)	785
BseMI	GCAATG	2 cut(s)	1116, 1444
BseMII	CTCAG	3 cut(s)	263, 412, 876
BseNI	ACTGG	2 cut(s)	964, 1807
BseRI	GAGGAG	6 cut(s)	68, 459, 490, 1180, 1714, 1745
BseSI	GKGCMC	4 cut(s)	180, 535, 555, 918
BseX3I	CGGCCG	1 cut(s)	243
BsgI	GTGCAG	1 cut(s)	242
Bsh1236I	CGCG	4 cut(s)	197, 212, 248, 1365
Bsh1285I	CGRYCG	1 cut(s)	246
BshNI	GGYRCC	4 cut(s)	175, 280, 584, 656
BshTI	ACCGGT	1 cut(s)	11
BsiEI	CGRYCG	1 cut(s)	246
BsiHKAI	GWGCWC	4 cut(s)	500, 555, 742, 1593
BsiHKCI	CYCGRG	5 cut(s)	43, 258, 803, 1612, 1656
BsiWI	CGTACG	1 cut(s)	201
BslFI	GGGAC	3 cut(s)	446, 836, 1673
BsmAI	GTCTC	4 cut(s)	671, 868, 940, 1017
BsmBI	CGTCTC	1 cut(s)	868
BsmFI	GGGAC	3 cut(s)	446, 836, 1673
BsmI	GAATGC	2 cut(s)	1069, 1338
BsoBI	CYCGRG	5 cut(s)	43, 258, 803, 1612, 1656
Bsp120I	GGGCCC	1 cut(s)	531
Bsp1286I	GDGCHC	7 cut(s)	180, 500, 535, 555, 742, 918, 1593
Bsp143I	GATC	8 cut(s)	372, 394, 765, 786, 1275, 1539, 1624, 1678
Bsp19I	CCATGG	1 cut(s)	769
Bsp68I	TCGCGA	1 cut(s)	1365
BspCNI	CTCAG	3 cut(s)	264, 411, 877
BspFNI	CGCG	4 cut(s)	197, 212, 248, 1365
BspMAI	CTGCAG	2 cut(s)	1137, 1143
BspMI	ACCTGC	1 cut(s)	325
BspPI	GGATC	5 cut(s)	380, 760, 1632, 1673, 1686
BspT107I	GGYRCC	4 cut(s)	175, 280, 584, 656
BsrDI	GCAATG	2 cut(s)	1116, 1444
BsrFI	RCCGGY	3 cut(s)	11, 277, 1636
BsrI	ACTGG	2 cut(s)	964, 1807
BssAI	RCCGGY	3 cut(s)	11, 277, 1636
BssMI	GATC	8 cut(s)	372, 394, 765, 786, 1275, 1539, 1624, 1678
BssNI	GRCGYC	1 cut(s)	291
BssT1I	CCWWGG	4 cut(s)	417, 580, 769, 1124
Bst2UI	CCWGG	3 cut(s)	38, 1106, 1853
Bst4CI	ACNGT	4 cut(s)	220, 382, 859, 1301
Bst6I	CTCTTC	1 cut(s)	1044
BstACI	GRCGYC	1 cut(s)	291
BstAPI	GCANNNNNTGC	1 cut(s)	1344
BstBAI	YACGTR	1 cut(s)	184
BstC8I	GCNNGC	3 cut(s)	225, 405, 1667
BstDEI	CTNAG	3 cut(s)	272, 398, 885
BstDSI	CCRYGG	3 cut(s)	195, 246, 769
BstEII	GGTNACC	1 cut(s)	616
BstF5I	GGATG	3 cut(s)	231, 1698, 1801
BstFNI	CGCG	4 cut(s)	197, 212, 248, 1365
BstHHI	GCGC	1 cut(s)	212
BstKTI	GATC	8 cut(s)	375, 397, 768, 789, 1278, 1542, 1627, 1681
BstMAI	GTCTC	4 cut(s)	671, 868, 940, 1017
BstMBI	GATC	8 cut(s)	372, 394, 765, 786, 1275, 1539, 1624, 1678
BstMCI	CGRYCG	1 cut(s)	246
BstNI	CCWGG	3 cut(s)	38, 1106, 1853
BstNSI	RCATGY	2 cut(s)	407, 445
BstPI	GGTNACC	1 cut(s)	616
BstSFI	CTRYAG	2 cut(s)	1133, 1139
BstSLI	GKGCMC	4 cut(s)	180, 535, 555, 918
BstUI	CGCG	4 cut(s)	197, 212, 248, 1365
BstV2I	GAAGAC	2 cut(s)	1383, 1516
BstX2I	RGATCY	3 cut(s)	765, 1539, 1678
BstXI	CCANNNNNNTGG	1 cut(s)	653
BstYI	RGATCY	3 cut(s)	765, 1539, 1678
BstZI	CGGCCG	1 cut(s)	243
BtgI	CCRYGG	3 cut(s)	195, 246, 769
BtgZI	GCGATG	1 cut(s)	1386
BtrI	CACGTC	1 cut(s)	526
BtsCI	GGATG	3 cut(s)	231, 1698, 1801
BtsI	GCAGTG	3 cut(s)	843, 1333, 1342
BtsIMutI	CAGTG	5 cut(s)	843, 1068, 1333, 1342, 1814
BtuMI	TCGCGA	1 cut(s)	1365
BveI	ACCTGC	1 cut(s)	325
Cac8I	GCNNGC	3 cut(s)	225, 405, 1667
CaiI	CAGNNNCTG	1 cut(s)	1309
CfoI	GCGC	1 cut(s)	212
Cfr10I	RCCGGY	3 cut(s)	11, 277, 1636
Cfr42I	CCGCGG	2 cut(s)	198, 249
Cfr9I	CCCGGG	3 cut(s)	43, 803, 1656
CpoI	CGGWCCG	1 cut(s)	482
CseI	GACGC	1 cut(s)	619
Csp6I	GTAC	2 cut(s)	202, 487
CspAI	ACCGGT	1 cut(s)	11
CspI	CGGWCCG	1 cut(s)	482
CviAII	CATG	9 cut(s)	157, 404, 442, 770, 1237, 1462, 1482, 1784, 1792
CviQI	GTAC	2 cut(s)	202, 487
DdeI	CTNAG	3 cut(s)	272, 398, 885
DpnI	GATC	8 cut(s)	374, 396, 767, 788, 1277, 1541, 1626, 1680
DpnII	GATC	8 cut(s)	372, 394, 765, 786, 1275, 1539, 1624, 1678
DraIII	CACNNNGTG	1 cut(s)	541
EaeI	YGGCCR	2 cut(s)	243, 571
EagI	CGGCCG	1 cut(s)	243
Eam1104I	CTCTTC	1 cut(s)	1044
EarI	CTCTTC	1 cut(s)	1044
EciI	GGCGGA	4 cut(s)	437, 493, 1037, 1717
Ecl136II	GAGCTC	2 cut(s)	498, 740
EclXI	CGGCCG	1 cut(s)	243
Eco130I	CCWWGG	4 cut(s)	417, 580, 769, 1124
Eco147I	AGGCCT	1 cut(s)	416
Eco24I	GRGCYC	3 cut(s)	500, 535, 742
Eco47I	GGWCC	5 cut(s)	40, 346, 360, 433, 482
Eco52I	CGGCCG	1 cut(s)	243
Eco53kI	GAGCTC	2 cut(s)	498, 740
Eco88I	CYCGRG	5 cut(s)	43, 258, 803, 1612, 1656
Eco91I	GGTNACC	1 cut(s)	616
EcoICRI	GAGCTC	2 cut(s)	498, 740
EcoO109I	RGGNCCY	2 cut(s)	226, 360
EcoO65I	GGTNACC	1 cut(s)	616
EcoRI	GAATTC	1 cut(s)	829
EcoRII	CCWGG	3 cut(s)	36, 1104, 1851
EcoT14I	CCWWGG	4 cut(s)	417, 580, 769, 1124
EcoT38I	GRGCYC	3 cut(s)	500, 535, 742
ErhI	CCWWGG	4 cut(s)	417, 580, 769, 1124
Esp3I	CGTCTC	1 cut(s)	868
FaeI	CATG	9 cut(s)	160, 407, 445, 773, 1240, 1465, 1485, 1787, 1795
FalI	AAGNNNNNCTT	2 cut(s)	1577, 1609
FaqI	GGGAC	3 cut(s)	446, 836, 1673
FatI	CATG	9 cut(s)	156, 403, 441, 769, 1236, 1461, 1481, 1783, 1791
FauI	CCCGC	5 cut(s)	202, 241, 243, 306, 470
FbaI	TGATCA	1 cut(s)	1275
FokI	GGATG	3 cut(s)	218, 1685, 1808
FriOI	GRGCYC	3 cut(s)	500, 535, 742
FspBI	CTAG	4 cut(s)	735, 975, 1016, 1876
GlaI	GCGC	1 cut(s)	211
GsuI	CTGGAG	1 cut(s)	610
HgaI	GACGC	1 cut(s)	619
HhaI	GCGC	1 cut(s)	212
Hin1I	GRCGYC	1 cut(s)	291
Hin1II	CATG	9 cut(s)	160, 407, 445, 773, 1240, 1465, 1485, 1787, 1795
Hin6I	GCGC	1 cut(s)	210
HinP1I	GCGC	1 cut(s)	210
HindIII	AAGCTT	2 cut(s)	648, 1667
HphI	GGTGA	9 cut(s)	183, 226, 313, 349, 628, 829, 1499, 1543, 1733
Hpy166II	GTNNAC	5 cut(s)	118, 553, 956, 1459, 1647
Hpy188I	TCNGA	5 cut(s)	725, 1272, 1305, 1674, 1804
Hpy8I	GTNNAC	5 cut(s)	118, 553, 956, 1459, 1647
Hpy99I	CGWCG	6 cut(s)	371, 527, 572, 1370, 1862, 1865
HpyAV	CCTTC	6 cut(s)	406, 658, 754, 916, 1071, 1579
HpyCH4III	ACNGT	4 cut(s)	220, 382, 859, 1301
HpyCH4IV	ACGT	6 cut(s)	183, 204, 291, 525, 641, 873
HpyF3I	CTNAG	3 cut(s)	272, 398, 885
HpySE526I	ACGT	6 cut(s)	183, 204, 291, 525, 641, 873
Hsp92I	GRCGYC	1 cut(s)	291
Hsp92II	CATG	9 cut(s)	160, 407, 445, 773, 1240, 1465, 1485, 1787, 1795
HspAI	GCGC	1 cut(s)	210
Ksp22I	TGATCA	1 cut(s)	1275
KspI	CCGCGG	2 cut(s)	198, 249
Kzo9I	GATC	8 cut(s)	372, 394, 765, 786, 1275, 1539, 1624, 1678
LmnI	GCTCC	4 cut(s)	47, 495, 503, 1588
LweI	GCATC	1 cut(s)	1707
MaeI	CTAG	4 cut(s)	735, 975, 1016, 1876
MaeII	ACGT	6 cut(s)	183, 204, 291, 525, 641, 873
MaeIII	GTNAC	9 cut(s)	189, 214, 287, 301, 376, 616, 1114, 1549, 1820
MalI	GATC	8 cut(s)	374, 396, 767, 788, 1277, 1541, 1626, 1680
MboI	GATC	8 cut(s)	372, 394, 765, 786, 1275, 1539, 1624, 1678
MboII	GAAGA	9 cut(s)	700, 832, 1061, 1102, 1241, 1352, 1388, 1516, 1684
MflI	RGATCY	3 cut(s)	765, 1539, 1678
MhlI	GDGCHC	7 cut(s)	180, 500, 535, 555, 742, 918, 1593
MluCI	AATT	9 cut(s)	475, 668, 701, 829, 982, 1030, 1044, 1513, 1528
MlyI	GAGTC	5 cut(s)	250, 602, 1019, 1067, 1793
MmeI	TCCRAC	2 cut(s)	300, 1726
MroXI	GAANNNNTTC	2 cut(s)	1081, 1356
MseI	TTAA	2 cut(s)	1737, 1842
MslI	CAYNNNNRTG	3 cut(s)	590, 1271, 1782
MspA1I	CMGCKG	5 cut(s)	197, 248, 816, 1132, 1138
Mva1269I	GAATGC	2 cut(s)	1069, 1338
MvaI	CCWGG	3 cut(s)	38, 1106, 1853
MvnI	CGCG	4 cut(s)	197, 212, 248, 1365
NciI	CCSGG	8 cut(s)	30, 44, 45, 804, 805, 913, 1657, 1658
NcoI	CCATGG	1 cut(s)	769
NdeII	GATC	8 cut(s)	372, 394, 765, 786, 1275, 1539, 1624, 1678
NlaIII	CATG	9 cut(s)	160, 407, 445, 773, 1240, 1465, 1485, 1787, 1795
NmeAIII	GCCGAG	2 cut(s)	76, 590
NmuCI	GTSAC	7 cut(s)	189, 214, 287, 301, 376, 616, 1549
NruI	TCGCGA	1 cut(s)	1365
NspI	RCATGY	2 cut(s)	407, 445
OliI	CACNNNNGTG	1 cut(s)	590
PaeI	GCATGC	1 cut(s)	407
PaqCI	CACCTGC	1 cut(s)	325
PceI	AGGCCT	1 cut(s)	416
PcsI	WCGNNNNNNNCGW	1 cut(s)	1854
PctI	GAATGC	2 cut(s)	1069, 1338
PdmI	GAANNNNTTC	2 cut(s)	1081, 1356
PfeI	GAWTC	6 cut(s)	307, 427, 544, 1244, 1256, 1357
Pfl23II	CGTACG	1 cut(s)	201
PflMI	CCANNNNNTGG	1 cut(s)	1111
PinAI	ACCGGT	1 cut(s)	11
PleI	GAGTC	5 cut(s)	250, 602, 1018, 1066, 1793
PpsI	GAGTC	5 cut(s)	250, 602, 1018, 1066, 1793
Ppu21I	YACGTR	1 cut(s)	184
PpuMI	RGGWCCY	1 cut(s)	360
Psp124BI	GAGCTC	2 cut(s)	500, 742
Psp1406I	AACGTT	1 cut(s)	873
Psp5II	RGGWCCY	1 cut(s)	360
Psp6I	CCWGG	3 cut(s)	36, 1104, 1851
PspEI	GGTNACC	1 cut(s)	616
PspGI	CCWGG	3 cut(s)	36, 1104, 1851
PspLI	CGTACG	1 cut(s)	201
PspOMI	GGGCCC	1 cut(s)	531
PspPPI	RGGWCCY	1 cut(s)	360
PstI	CTGCAG	2 cut(s)	1137, 1143
PstNI	CAGNNNCTG	1 cut(s)	1309
PsuI	RGATCY	3 cut(s)	765, 1539, 1678
PvuII	CAGCTG	3 cut(s)	816, 1132, 1138
RruI	TCGCGA	1 cut(s)	1365
RsaI	GTAC	2 cut(s)	203, 488
RsaNI	GTAC	2 cut(s)	202, 487
RseI	CAYNNNNRTG	3 cut(s)	590, 1271, 1782
Rsr2I	CGGWCCG	1 cut(s)	482
RsrII	CGGWCCG	1 cut(s)	482
SacI	GAGCTC	2 cut(s)	500, 742
SacII	CCGCGG	2 cut(s)	198, 249
SaqAI	TTAA	2 cut(s)	1737, 1842
Sau3AI	GATC	8 cut(s)	372, 394, 765, 786, 1275, 1539, 1624, 1678
SchI	GAGTC	5 cut(s)	250, 602, 1019, 1067, 1793
SduI	GDGCHC	7 cut(s)	180, 500, 535, 555, 742, 918, 1593
SfaNI	GCATC	1 cut(s)	1707
SfcI	CTRYAG	2 cut(s)	1133, 1139
Sfr303I	CCGCGG	2 cut(s)	198, 249
SgrBI	CCGCGG	2 cut(s)	198, 249
SinI	GGWCC	5 cut(s)	40, 346, 360, 433, 482
SmaI	CCCGGG	3 cut(s)	45, 805, 1658
SmiMI	CAYNNNNRTG	3 cut(s)	590, 1271, 1782
SmlI	CTYRAG	1 cut(s)	743
SmoI	CTYRAG	1 cut(s)	743
SphI	GCATGC	1 cut(s)	407
Sse9I	AATT	9 cut(s)	475, 668, 701, 829, 982, 1030, 1044, 1513, 1528
SseBI	AGGCCT	1 cut(s)	416
SspMI	CTAG	4 cut(s)	735, 975, 1016, 1876
SstI	GAGCTC	2 cut(s)	500, 742
StuI	AGGCCT	1 cut(s)	416
StyI	CCWWGG	4 cut(s)	417, 580, 769, 1124
TaaI	ACNGT	4 cut(s)	220, 382, 859, 1301
TaiI	ACGT	6 cut(s)	186, 207, 294, 528, 644, 876
TaqI	TCGA	5 cut(s)	686, 717, 789, 1073, 1088
TasI	AATT	9 cut(s)	475, 668, 701, 829, 982, 1030, 1044, 1513, 1528
TauI	GCSGC	7 cut(s)	200, 248, 943, 1153, 1654, 1733, 1830
TfiI	GAWTC	6 cut(s)	307, 427, 544, 1244, 1256, 1357
Tru1I	TTAA	2 cut(s)	1737, 1842
Tru9I	TTAA	2 cut(s)	1737, 1842
TscAI	CASTG	5 cut(s)	850, 1068, 1340, 1349, 1814
TseFI	GTSAC	7 cut(s)	189, 214, 287, 301, 376, 616, 1549
Tsp45I	GTSAC	7 cut(s)	189, 214, 287, 301, 376, 616, 1549
TspDTI	ATGAA	4 cut(s)	173, 767, 1389, 1493
TspGWI	ACGGA	2 cut(s)	474, 1691
TspMI	CCCGGG	3 cut(s)	43, 803, 1656
TspRI	CASTG	5 cut(s)	850, 1068, 1340, 1349, 1814
Van91I	CCANNNNNTGG	1 cut(s)	1111
VneI	GTGCAC	1 cut(s)	551
VpaK11BI	GGWCC	5 cut(s)	40, 346, 360, 433, 482
XapI	RAATTY	3 cut(s)	701, 829, 1030
XceI	RCATGY	2 cut(s)	407, 445
XcmI	CCANNNNNNNNNTGG	2 cut(s)	163, 1479
XmaI	CCCGGG	3 cut(s)	43, 803, 1656
XmnI	GAANNNNTTC	2 cut(s)	1081, 1356
XspI	CTAG	4 cut(s)	735, 975, 1016, 1876
ZraI	GACGTC	1 cut(s)	292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.