Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0009258

Physical Location & Seq

Genomic Coordinates Reverse (-)

7574059 .. 7578211

Gene Structure 4153 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1105600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGAAGATACCAGCTTTGTACGGTTTCCGGGAAGTCTGGACCCCGGAGCCCAAGAGTTCAGACCCAGTAACCAGAACCAAATACCCATCTTCGGACCTCCACAGCCGCCGCCACAACTGCTACCACCGTCTCCATCTCCCCACCAGGTTTACTATCCCTACCCACCCCCGCCAATCAGCGAAGTTGTACCTTACGCTCCGTTCTCCGCGCCAGCCGCGTACGTTAGTGCGGGGGCTACCGTATGCGCACCGTTGCCGCCTCCGACGGCGGCCGCCACACGGGCAGTGCTTCTGAACGGGGTTTCGAGTGACGTCAGCGAGGGGACTGTGCGGAGGGAGTTGGAGGGGTTCGGGGAGGTGAGGTGGGTGCAGATGGAGAGGGCGTGCGACGGTATCGTGACCGTCCATTTCTACGATCTGAGGCATGCAGAGAGGGCGTTGCGGGAGATTCGGGAGCAGTACATGCAGCAGGAAGACAGGATTCGTAACCACTACGCCACCTTGTCGTTCACGACGGCCACATCACCTCTGCCGCCTCCTAATTTCCCGCTTCCGTTTCCTCCAGGTCGCGGCCTCATCGCGGGGCAGGCCGTGTGGGCCCAGTTCGTCTTTCCGGCCTTGAAAGCCGTCCTGGACGGCCACAATCAGGGCACCATCGTCATTTTCCATTTGGACCCGGCTGTCACCACCTCCGCTCTCAAAGACATATTCCAAGCTTTTGGTGCTGTGAAGGAATTGAGAGAGACGCCATCGAAGAAGCACCAAAAATTCATCGAGTTCTTCGACGTCAGAGACGCGGCGAGAGCTCTCGAGGAGATGAACGGCAAAGAAATCAACGGAAAATCAGTTGTGATTCAATTCAGTCGGCCCGGTGGCCACAGCCGGAAGTTTTTTAATGCGGTGGCTCACACTGCCCCAACTCTACTTTCGCCTCACAATCTCTTTGCACCGCTGCCGCCGGCGGAATTGGCTGTGAAATTCTCTAGACGCTCGAACAGTTTTAGATTGGCGGGGCCGCAGCCTCGTCTGTGTACATCCTCATCGCAAATCCAATTTTCATCGACTAGGAGCAATAATAGATCAAGTAGTTCTAGCAGCAGCAAGGGAATGGTAATTATCAGAAACAATGTTGAATCCAAAATGGCGGGTTTAAATTTGGATGCAATTCAAGAGAAGAGGTGGTCTTCGTCTTCGAAGAAGATGAGTTGCGGGAGCTCGCAGAGCCTTGAAGCCACTGCAACGAGTCCGAAGCAGCCGAAGAGCAGTAGGGGGAAGAAGGGAAGACAAGCGAAGAAGTTAGATTCTAAATTTTTAATCAAAGAAGATGCCTTGTCGGAATCCACCAGCGGAGATACCAGAACCACCGTCATGATCAAGAACATACCCAATAAATACAGTCAGAAGCTGCTGTTGAACATGCTGGACAACCACTGTATCCACTGTAATGAACAGATCATTAGCGCCGGCGATCACGGTGGTGGTGATGATGAAAAGCAGCCTTTCTCCTCCTACGATTTCGTTTATCTTCCCATTGATTTCAACAACAAGTGCAATGTGGGATATGGATTCGTGAACATGACGACTCCGCAGGCAACGTGGAGGCTGTACAAAGCCTTTCACCATCAACATTGGGAGGTCTTCAATTCCAGGAAAATCTGCCAAGTCACCTACGCTCGAGTTCAGGGATTGGAGGCGTTGAAGGAGCATTTCAAGAACTCGAAGTTCCCGTGCGACATGGAGCACTACCTGCCAGTGGTGTTTTCTCCGCCTCGGGACGGGAAGCAACTGACCGAACCACTTCCCATTGTTGGCCTTGGCGTCCAAATTAATAATAAAACCCACTCCTCCACCACCTCCTCCTCTTCCTCCATTTCTCTCCTGCTCCCGCCACCTCACCATCACGATATTGATTACGACGCGCCTGTGTCCGCGTGTGATACGGACGACGACAGCAGCCAGAACGGCGGCGCCGTGGCTGACGATGATGATGAACAAGATAGACAACTACCACCTACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_2

Protein Analysis

673

Amino Acids

74.16

Weight (kDa)

8.21

Isoelectric Point (pI)

60.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	219 - 283	3.3e-11	RNA recognition motif
RRM_2	PF04059	453 - 478	9e-06	RNA recognition motif 2
RRM_2	PF04059	502 - 571	2.3e-25	RNA recognition motif 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26120
fragaria_vesca	FvH4_4g25250 FvH4_4g25250 FvH4_4g25250
malus_domestica	MD13G1105600.v1.1 MD16G1105800.v1.1
prunus_persica	Prupe.1G240800_v2.0.a1 Prupe.1G240800_v2.0.a1
pyrus_communis	pycom13g09160
rosa_chinensis	RchiOBHm_Chr4g0432441
rosa_laevigata	RLG00000006842
rosa_multiflora	Rmu_co8411925.1_g000001 Rmu_sc0001084.1_g000018 Rmu_sc0038130.1_g000001
rosa_roxburghii	Rroxscaffold_3G00239560 Rroxscaffold_5G00373920
rosa_rugosa	Rorug04G0259000
rosa_samantha	Rh4AG314300 Rh4BG322100 Rh4CG337200 Rh4DG317800
rosa_wichuraiana	Rw4G027330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	680
AatII	GACGTC	2 cut(s)	315, 789
Acc16I	TGCGCA	1 cut(s)	247
Acc36I	ACCTGC	1 cut(s)	1755
AccB1I	GGYRCC	2 cut(s)	650, 1967
AccBSI	CCGCTC	1 cut(s)	695
AccII	CGCG	7 cut(s)	209, 218, 570, 581, 797, 1919, 1931
AcoI	YGGCCR	4 cut(s)	270, 516, 637, 874
AcsI	RAATTY	4 cut(s)	767, 977, 1153, 1307
AcyI	GRCGYC	5 cut(s)	312, 746, 786, 1818, 1968
AfaI	GTAC	6 cut(s)	21, 189, 221, 461, 1033, 1607
AfiI	CCNNNNNNNGG	8 cut(s)	92, 279, 569, 580, 646, 1753, 1775, 1808
AjnI	CCWGG	4 cut(s)	144, 562, 630, 1646
AjuI	GAANNNNNNNTTGG	2 cut(s)	910, 942
AleI	CACNNNNGTG	1 cut(s)	1476
AluBI	AGCT	5 cut(s)	15, 716, 806, 1215, 1405
AluI	AGCT	5 cut(s)	15, 716, 806, 1215, 1405
Alw21I	GWGCWC	3 cut(s)	808, 1217, 1743
Alw26I	GTCTC	3 cut(s)	135, 737, 786
AlwNI	CAGNNNCTG	1 cut(s)	1405
Ama87I	CYCGRG	3 cut(s)	809, 1674, 1770
ApaI	GGGCCC	1 cut(s)	601
ApeKI	GCWGC	9 cut(s)	466, 952, 1018, 1095, 1098, 1252, 1405, 1495, 1953
ApoI	RAATTY	4 cut(s)	767, 977, 1153, 1307
AseI	ATTAAT	1 cut(s)	1827
Asp700I	GAANNNNTTC	1 cut(s)	1797
AspLEI	GCGC	5 cut(s)	211, 248, 1463, 1921, 1970
AspS9I	GGNCC	7 cut(s)	40, 95, 597, 598, 673, 867, 1013
AsuC2I	CCSGG	4 cut(s)	30, 45, 677, 870
AsuHPI	GGTGA	7 cut(s)	370, 516, 676, 1493, 1610, 1657, 1886
AsuII	TTCGAA	1 cut(s)	1193
AvaI	CYCGRG	3 cut(s)	809, 1674, 1770
AvaII	GGWCC	3 cut(s)	40, 95, 673
BaeGI	GKGCMC	2 cut(s)	601, 653
BaeI	ACNNNNGTAYC	2 cut(s)	1417, 1450
BalI	TGGCCA	1 cut(s)	876
BanI	GGYRCC	2 cut(s)	650, 1967
BanII	GRGCYC	4 cut(s)	52, 601, 808, 1217
BbsI	GAAGAC	5 cut(s)	480, 1176, 1182, 1288, 1630
Bbv12I	GWGCWC	3 cut(s)	808, 1217, 1743
BbvI	GCAGC	9 cut(s)	478, 939, 1030, 1107, 1110, 1264, 1392, 1507, 1965
BccI	CCATC	7 cut(s)	95, 142, 367, 662, 757, 1629, 1905
BceAI	ACGGC	8 cut(s)	282, 531, 575, 611, 652, 838, 1955, 1978
BciT130I	CCWGG	4 cut(s)	146, 564, 632, 1648
BciVI	GTATCC	1 cut(s)	1445
BclI	TGATCA	1 cut(s)	1371
BcnI	CCSGG	4 cut(s)	30, 45, 677, 870
BcoDI	GTCTC	3 cut(s)	135, 737, 786
BfaI	CTAG	4 cut(s)	984, 1065, 1092, 2017
BfoI	RGCGCY	2 cut(s)	1464, 1971
BfuAI	ACCTGC	1 cut(s)	1755
BfuI	GTATCC	1 cut(s)	1445
BglI	GCCNNNNNGGC	3 cut(s)	281, 596, 1962
Bme1390I	CCNGG	8 cut(s)	30, 45, 146, 564, 632, 677, 870, 1648
Bme18I	GGWCC	3 cut(s)	40, 95, 673
BmeT110I	CYCGRG	3 cut(s)	809, 1674, 1770
BmgT120I	GGNCC	7 cut(s)	40, 95, 597, 598, 673, 867, 1013
BmiI	GGNNCC	7 cut(s)	42, 49, 599, 652, 675, 1014, 1969
BmrFI	CCNGG	8 cut(s)	30, 45, 146, 564, 632, 677, 870, 1648
BmrI	ACTGGG	2 cut(s)	60, 595
BmsI	GCATC	2 cut(s)	1150, 1315
BmuI	ACTGGG	2 cut(s)	60, 595
BpiI	GAAGAC	5 cut(s)	480, 1176, 1182, 1288, 1630
BpmI	CTGGAG	1 cut(s)	546
Bpu14I	TTCGAA	1 cut(s)	1193
BpuMI	CCSGG	4 cut(s)	30, 45, 677, 870
BsaHI	GRCGYC	5 cut(s)	312, 746, 786, 1818, 1968
BsaJI	CCNNGG	4 cut(s)	43, 1769, 1813, 1971
BsaXI	ACNNNNNCTCC	4 cut(s)	347, 368, 377, 398
Bsc4I	CCNNNNNNNGG	8 cut(s)	92, 279, 569, 580, 646, 1753, 1775, 1808
Bse118I	RCCGGY	2 cut(s)	958, 1463
Bse1I	ACTGG	3 cut(s)	66, 601, 1751
Bse3DI	GCAATG	1 cut(s)	1558
BseBI	CCWGG	4 cut(s)	146, 564, 632, 1648
BseDI	CCNNGG	4 cut(s)	43, 1769, 1813, 1971
BseGI	GGATG	2 cut(s)	1034, 1165
BseLI	CCNNNNNNNGG	8 cut(s)	92, 279, 569, 580, 646, 1753, 1775, 1808
BseMI	GCAATG	1 cut(s)	1558
BseMII	CTCAG	1 cut(s)	410
BseNI	ACTGG	3 cut(s)	66, 601, 1751
BseRI	GAGGAG	5 cut(s)	827, 1495, 1834, 1846, 1849
BseSI	GKGCMC	2 cut(s)	601, 653
BseX3I	CGGCCG	1 cut(s)	270
BseXI	GCAGC	9 cut(s)	478, 939, 1030, 1107, 1110, 1264, 1392, 1507, 1965
BsgI	GTGCAG	1 cut(s)	389
Bsh1236I	CGCG	7 cut(s)	209, 218, 570, 581, 797, 1919, 1931
Bsh1285I	CGRYCG	1 cut(s)	273
BshNI	GGYRCC	2 cut(s)	650, 1967
BsiEI	CGRYCG	1 cut(s)	273
BsiHKAI	GWGCWC	3 cut(s)	808, 1217, 1743
BsiHKCI	CYCGRG	3 cut(s)	809, 1674, 1770
BsiSI	CCGG	8 cut(s)	29, 45, 614, 677, 870, 883, 959, 1464
BsiWI	CGTACG	1 cut(s)	219
BslFI	GGGAC	2 cut(s)	337, 1787
BslI	CCNNNNNNNGG	8 cut(s)	92, 279, 569, 580, 646, 1753, 1775, 1808
BsmAI	GTCTC	3 cut(s)	135, 737, 786
BsmBI	CGTCTC	3 cut(s)	135, 737, 786
BsmFI	GGGAC	2 cut(s)	337, 1787
BsoBI	CYCGRG	3 cut(s)	809, 1674, 1770
Bsp119I	TTCGAA	1 cut(s)	1193
Bsp120I	GGGCCC	1 cut(s)	597
Bsp1286I	GDGCHC	6 cut(s)	52, 601, 653, 808, 1217, 1743
Bsp1407I	TGTACA	2 cut(s)	1031, 1605
Bsp143I	GATC	5 cut(s)	415, 1079, 1371, 1452, 1468
BspCNI	CTCAG	1 cut(s)	411
BspFNI	CGCG	7 cut(s)	209, 218, 570, 581, 797, 1919, 1931
BspHI	TCATGA	1 cut(s)	1368
BspLI	GGNNCC	7 cut(s)	42, 49, 599, 652, 675, 1014, 1969
BspMI	ACCTGC	1 cut(s)	1755
BspQI	GCTCTTC	1 cut(s)	1253
BspT104I	TTCGAA	1 cut(s)	1193
BspT107I	GGYRCC	2 cut(s)	650, 1967
BsrBI	CCGCTC	1 cut(s)	695
BsrDI	GCAATG	1 cut(s)	1558
BsrFI	RCCGGY	2 cut(s)	958, 1463
BsrGI	TGTACA	2 cut(s)	1031, 1605
BsrI	ACTGG	3 cut(s)	66, 601, 1751
BssAI	RCCGGY	2 cut(s)	958, 1463
BssECI	CCNNGG	4 cut(s)	43, 1769, 1813, 1971
BssMI	GATC	5 cut(s)	415, 1079, 1371, 1452, 1468
BssNI	GRCGYC	5 cut(s)	312, 746, 786, 1818, 1968
BssT1I	CCWWGG	1 cut(s)	1813
Bst2UI	CCWGG	4 cut(s)	146, 564, 632, 1648
Bst6I	CTCTTC	3 cut(s)	1169, 1253, 1867
BstACI	GRCGYC	5 cut(s)	312, 746, 786, 1818, 1968
BstAPI	GCANNNNNTGC	2 cut(s)	463, 1747
BstAUI	TGTACA	2 cut(s)	1031, 1605
BstBI	TTCGAA	1 cut(s)	1193
BstC8I	GCNNGC	8 cut(s)	213, 385, 426, 588, 960, 1217, 1465, 1590
BstDEI	CTNAG	1 cut(s)	419
BstDSI	CCRYGG	1 cut(s)	1971
BstF5I	GGATG	2 cut(s)	1034, 1165
BstFNI	CGCG	7 cut(s)	209, 218, 570, 581, 797, 1919, 1931
BstH2I	RGCGCY	2 cut(s)	1464, 1971
BstHHI	GCGC	5 cut(s)	211, 248, 1463, 1921, 1970
BstKTI	GATC	5 cut(s)	418, 1082, 1374, 1455, 1471
BstMAI	GTCTC	3 cut(s)	135, 737, 786
BstMBI	GATC	5 cut(s)	415, 1079, 1371, 1452, 1468
BstMCI	CGRYCG	1 cut(s)	273
BstNI	CCWGG	4 cut(s)	146, 564, 632, 1648
BstNSI	RCATGY	3 cut(s)	428, 466, 1420
BstSCI	CCNGG	8 cut(s)	28, 43, 144, 562, 630, 675, 868, 1646
BstSLI	GKGCMC	2 cut(s)	601, 653
BstUI	CGCG	7 cut(s)	209, 218, 570, 581, 797, 1919, 1931
BstV1I	GCAGC	9 cut(s)	478, 939, 1030, 1107, 1110, 1264, 1392, 1507, 1965
BstV2I	GAAGAC	5 cut(s)	480, 1176, 1182, 1288, 1630
BstXI	CCANNNNNNTGG	1 cut(s)	719
BstZI	CGGCCG	1 cut(s)	270
BsuI	GTATCC	1 cut(s)	1445
BtgI	CCRYGG	1 cut(s)	1971
BtgZI	GCGATG	2 cut(s)	562, 1026
BtsCI	GGATG	2 cut(s)	1034, 1165
BtsI	GCAGTG	3 cut(s)	291, 909, 1233
BtsIMutI	CAGTG	6 cut(s)	291, 909, 1233, 1429, 1438, 1758
BveI	ACCTGC	1 cut(s)	1755
Cac8I	GCNNGC	8 cut(s)	213, 385, 426, 588, 960, 1217, 1465, 1590
CaiI	CAGNNNCTG	1 cut(s)	1405
CciI	TCATGA	1 cut(s)	1368
CciNI	GCGGCCGC	1 cut(s)	270
CfoI	GCGC	5 cut(s)	211, 248, 1463, 1921, 1970
Cfr10I	RCCGGY	2 cut(s)	958, 1463
Cfr13I	GGNCC	7 cut(s)	40, 95, 597, 598, 673, 867, 1013
CseI	GACGC	5 cut(s)	754, 803, 996, 1807, 1925
CsiI	ACCWGGT	1 cut(s)	144
Csp6I	GTAC	6 cut(s)	20, 188, 220, 460, 1032, 1606
CviAII	CATG	6 cut(s)	425, 463, 1369, 1417, 1576, 1735
CviQI	GTAC	6 cut(s)	20, 188, 220, 460, 1032, 1606
DdeI	CTNAG	1 cut(s)	419
DinI	GGCGCC	1 cut(s)	1969
DpnI	GATC	5 cut(s)	417, 1081, 1373, 1454, 1470
DpnII	GATC	5 cut(s)	415, 1079, 1371, 1452, 1468
DraI	TTTAAA	1 cut(s)	1152
DrdI	GACNNNNNNGTC	1 cut(s)	680
DseDI	GACNNNNNNGTC	1 cut(s)	680
EaeI	YGGCCR	4 cut(s)	270, 516, 637, 874
EagI	CGGCCG	1 cut(s)	270
Eam1104I	CTCTTC	3 cut(s)	1169, 1253, 1867
EarI	CTCTTC	3 cut(s)	1169, 1253, 1867
EciI	GGCGGA	2 cut(s)	977, 1755
Ecl136II	GAGCTC	2 cut(s)	806, 1215
EclXI	CGGCCG	1 cut(s)	270
Eco130I	CCWWGG	1 cut(s)	1813
Eco24I	GRGCYC	4 cut(s)	52, 601, 808, 1217
Eco47I	GGWCC	3 cut(s)	40, 95, 673
Eco52I	CGGCCG	1 cut(s)	270
Eco53kI	GAGCTC	2 cut(s)	806, 1215
Eco88I	CYCGRG	3 cut(s)	809, 1674, 1770
EcoICRI	GAGCTC	2 cut(s)	806, 1215
EcoRII	CCWGG	4 cut(s)	144, 562, 630, 1646
EcoT14I	CCWWGG	1 cut(s)	1813
EcoT38I	GRGCYC	4 cut(s)	52, 601, 808, 1217
EgeI	GGCGCC	1 cut(s)	1969
EheI	GGCGCC	1 cut(s)	1969
ErhI	CCWWGG	1 cut(s)	1813
Esp3I	CGTCTC	3 cut(s)	135, 737, 786
FaeI	CATG	6 cut(s)	428, 466, 1372, 1420, 1579, 1738
FaqI	GGGAC	2 cut(s)	337, 1787
FatI	CATG	6 cut(s)	424, 462, 1368, 1416, 1575, 1734
FauI	CCCGC	9 cut(s)	177, 223, 435, 555, 574, 1003, 1138, 1202, 1893
FbaI	TGATCA	1 cut(s)	1371
FokI	GGATG	2 cut(s)	1021, 1172
FriOI	GRGCYC	4 cut(s)	52, 601, 808, 1217
FspAI	RTGCGCAY	1 cut(s)	247
FspBI	CTAG	4 cut(s)	984, 1065, 1092, 2017
FspI	TGCGCA	1 cut(s)	247
GlaI	GCGC	5 cut(s)	210, 247, 1462, 1920, 1969
GsuI	CTGGAG	1 cut(s)	546
HaeII	RGCGCY	2 cut(s)	1464, 1971
HapII	CCGG	8 cut(s)	29, 45, 614, 677, 870, 883, 959, 1464
HgaI	GACGC	5 cut(s)	754, 803, 996, 1807, 1925
HhaI	GCGC	5 cut(s)	211, 248, 1463, 1921, 1970
Hin1I	GRCGYC	5 cut(s)	312, 746, 786, 1818, 1968
Hin1II	CATG	6 cut(s)	428, 466, 1372, 1420, 1579, 1738
Hin6I	GCGC	5 cut(s)	209, 246, 1461, 1919, 1968
HinP1I	GCGC	5 cut(s)	209, 246, 1461, 1919, 1968
HindIII	AAGCTT	1 cut(s)	714
HinfI	GANTC	9 cut(s)	448, 481, 853, 1133, 1243, 1301, 1337, 1566, 1582
HpaII	CCGG	8 cut(s)	29, 45, 614, 677, 870, 883, 959, 1464
HphI	GGTGA	7 cut(s)	370, 516, 676, 1493, 1610, 1657, 1886
Hpy166II	GTNNAC	4 cut(s)	151, 510, 1032, 1573
Hpy8I	GTNNAC	4 cut(s)	151, 510, 1032, 1573
Hpy99I	CGWCG	6 cut(s)	268, 392, 517, 788, 1919, 1949
HpyAV	CCTTC	3 cut(s)	724, 1270, 1693
HpyCH4IV	ACGT	4 cut(s)	222, 312, 786, 1595
HpyCH4V	TGCA	7 cut(s)	370, 428, 466, 947, 1163, 1238, 1551
HpyF3I	CTNAG	1 cut(s)	419
HpySE526I	ACGT	4 cut(s)	222, 312, 786, 1595
Hsp92I	GRCGYC	5 cut(s)	312, 746, 786, 1818, 1968
Hsp92II	CATG	6 cut(s)	428, 466, 1372, 1420, 1579, 1738
HspAI	GCGC	5 cut(s)	209, 246, 1461, 1919, 1968
KasI	GGCGCC	1 cut(s)	1967
KroI	GCCGGC	2 cut(s)	958, 1463
KroNI	GCCGGC	2 cut(s)	960, 1465
Ksp22I	TGATCA	1 cut(s)	1371
Kzo9I	GATC	5 cut(s)	415, 1079, 1371, 1452, 1468
LguI	GCTCTTC	1 cut(s)	1253
LmnI	GCTCC	8 cut(s)	47, 202, 454, 1068, 1212, 1702, 1738, 1887
Lsp1109I	GCAGC	9 cut(s)	478, 939, 1030, 1107, 1110, 1264, 1392, 1507, 1965
LweI	GCATC	2 cut(s)	1150, 1315
MabI	ACCWGGT	1 cut(s)	144
MaeI	CTAG	4 cut(s)	984, 1065, 1092, 2017
MaeII	ACGT	4 cut(s)	222, 312, 786, 1595
MaeIII	GTNAC	6 cut(s)	68, 308, 397, 485, 682, 1663
MalI	GATC	5 cut(s)	417, 1081, 1373, 1454, 1470
MbiI	CCGCTC	1 cut(s)	695
MboI	GATC	5 cut(s)	415, 1079, 1371, 1452, 1468
MhlI	GDGCHC	6 cut(s)	52, 601, 653, 808, 1217, 1743
MlsI	TGGCCA	1 cut(s)	876
MluNI	TGGCCA	1 cut(s)	876
Mly113I	GGCGCC	1 cut(s)	1968
MlyI	GAGTC	2 cut(s)	1252, 1576
MmeI	TCCRAC	3 cut(s)	287, 321, 1314
Mox20I	TGGCCA	1 cut(s)	876
MreI	CGCCGGCG	2 cut(s)	958, 1463
MroNI	GCCGGC	2 cut(s)	958, 1463
MroXI	GAANNNNTTC	1 cut(s)	1797
MscI	TGGCCA	1 cut(s)	876
MseI	TTAA	4 cut(s)	894, 1151, 1313, 1827
MslI	CAYNNNNRTG	3 cut(s)	1367, 1443, 1476
Msp20I	TGGCCA	1 cut(s)	876
MspA1I	CMGCKG	2 cut(s)	952, 1347
MspI	CCGG	8 cut(s)	29, 45, 614, 677, 870, 883, 959, 1464
MspR9I	CCNGG	8 cut(s)	30, 45, 146, 564, 632, 677, 870, 1648
MvaI	CCWGG	4 cut(s)	146, 564, 632, 1648
MvnI	CGCG	7 cut(s)	209, 218, 570, 581, 797, 1919, 1931
NaeI	GCCGGC	2 cut(s)	960, 1465
NarI	GGCGCC	1 cut(s)	1968
NciI	CCSGG	4 cut(s)	30, 45, 677, 870
NdeII	GATC	5 cut(s)	415, 1079, 1371, 1452, 1468
NgoMIV	GCCGGC	2 cut(s)	958, 1463
NlaIII	CATG	6 cut(s)	428, 466, 1372, 1420, 1579, 1738
NlaIV	GGNNCC	7 cut(s)	42, 49, 599, 652, 675, 1014, 1969
NmuCI	GTSAC	4 cut(s)	308, 397, 682, 1663
NotI	GCGGCCGC	1 cut(s)	270
NsbI	TGCGCA	1 cut(s)	247
NspI	RCATGY	3 cut(s)	428, 466, 1420
NspV	TTCGAA	1 cut(s)	1193
OliI	CACNNNNGTG	1 cut(s)	1476
PaeI	GCATGC	1 cut(s)	428
PaeR7I	CTCGAG	2 cut(s)	809, 1674
PagI	TCATGA	1 cut(s)	1368
PciSI	GCTCTTC	1 cut(s)	1253
PcsI	WCGNNNNNNNCGW	3 cut(s)	780, 1724, 1968
PdiI	GCCGGC	2 cut(s)	960, 1465
PdmI	GAANNNNTTC	1 cut(s)	1797
PfeI	GAWTC	7 cut(s)	448, 481, 853, 1133, 1301, 1337, 1566
Pfl23II	CGTACG	1 cut(s)	219
PfoI	TCCNGGA	3 cut(s)	28, 630, 1646
PleI	GAGTC	2 cut(s)	1251, 1576
PluTI	GGCGCC	1 cut(s)	1971
PpsI	GAGTC	2 cut(s)	1251, 1576
PshBI	ATTAAT	1 cut(s)	1827
Psp124BI	GAGCTC	2 cut(s)	808, 1217
Psp6I	CCWGG	4 cut(s)	144, 562, 630, 1646
PspGI	CCWGG	4 cut(s)	144, 562, 630, 1646
PspLI	CGTACG	1 cut(s)	219
PspN4I	GGNNCC	7 cut(s)	42, 49, 599, 652, 675, 1014, 1969
PspOMI	GGGCCC	1 cut(s)	597
PspPI	GGNCC	7 cut(s)	40, 95, 597, 598, 673, 867, 1013
PspXI	VCTCGAGB	1 cut(s)	1674
PstNI	CAGNNNCTG	1 cut(s)	1405
RsaI	GTAC	6 cut(s)	21, 189, 221, 461, 1033, 1607
RsaNI	GTAC	6 cut(s)	20, 188, 220, 460, 1032, 1606
RseI	CAYNNNNRTG	3 cut(s)	1367, 1443, 1476
SacI	GAGCTC	2 cut(s)	808, 1217
SapI	GCTCTTC	1 cut(s)	1253
SaqAI	TTAA	4 cut(s)	894, 1151, 1313, 1827
Sau3AI	GATC	5 cut(s)	415, 1079, 1371, 1452, 1468
Sau96I	GGNCC	7 cut(s)	40, 95, 597, 598, 673, 867, 1013
SchI	GAGTC	2 cut(s)	1252, 1576
ScrFI	CCNGG	8 cut(s)	30, 45, 146, 564, 632, 677, 870, 1648
SduI	GDGCHC	6 cut(s)	52, 601, 653, 808, 1217, 1743
SexAI	ACCWGGT	1 cut(s)	144
SfaNI	GCATC	2 cut(s)	1150, 1315
SfiI	GGCCNNNNNGGCC	1 cut(s)	596
SfoI	GGCGCC	1 cut(s)	1969
Sfr274I	CTCGAG	2 cut(s)	809, 1674
SfuI	TTCGAA	1 cut(s)	1193
SgrAI	CRCCGGYG	2 cut(s)	958, 1463
SinI	GGWCC	3 cut(s)	40, 95, 673
SlaI	CTCGAG	2 cut(s)	809, 1674
SmiMI	CAYNNNNRTG	3 cut(s)	1367, 1443, 1476
SmlI	CTYRAG	2 cut(s)	809, 1674
SmoI	CTYRAG	2 cut(s)	809, 1674
SphI	GCATGC	1 cut(s)	428
SspDI	GGCGCC	1 cut(s)	1967
SspMI	CTAG	4 cut(s)	984, 1065, 1092, 2017
SstI	GAGCTC	2 cut(s)	808, 1217
StyD4I	CCNGG	8 cut(s)	28, 43, 144, 562, 630, 675, 868, 1646
StyI	CCWWGG	1 cut(s)	1813
TaiI	ACGT	4 cut(s)	225, 315, 789, 1598
TaqII	GACCGA	1 cut(s)	1805
TatI	WGTACW	3 cut(s)	459, 1031, 1605
TfiI	GAWTC	7 cut(s)	448, 481, 853, 1133, 1301, 1337, 1566
Tru1I	TTAA	4 cut(s)	894, 1151, 1313, 1827
Tru9I	TTAA	4 cut(s)	894, 1151, 1313, 1827
TscAI	CASTG	6 cut(s)	291, 916, 1240, 1436, 1445, 1758
TseFI	GTSAC	4 cut(s)	308, 397, 682, 1663
TseI	GCWGC	9 cut(s)	466, 952, 1018, 1095, 1098, 1252, 1405, 1495, 1953
Tsp45I	GTSAC	4 cut(s)	308, 397, 682, 1663
TspDTI	ATGAA	6 cut(s)	760, 833, 1047, 1461, 1503, 2004
TspGWI	ACGGA	4 cut(s)	189, 543, 852, 1955
TspRI	CASTG	6 cut(s)	291, 916, 1240, 1436, 1445, 1758
VpaK11BI	GGWCC	3 cut(s)	40, 95, 673
VspI	ATTAAT	1 cut(s)	1827
XapI	RAATTY	4 cut(s)	767, 977, 1153, 1307
XbaI	TCTAGA	1 cut(s)	983
XceI	RCATGY	3 cut(s)	428, 466, 1420
XhoI	CTCGAG	2 cut(s)	809, 1674
XmnI	GAANNNNTTC	1 cut(s)	1797
XspI	CTAG	4 cut(s)	984, 1065, 1092, 2017
ZraI	GACGTC	2 cut(s)	313, 787

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.