Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0009258

Physical Location & Seq

Genomic Coordinates Reverse (-)

10999380 .. 11001748

Gene Structure 2369 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006842

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGCTGAAACCGGTTTCGTCCGGTTTCCGGGTGGCCTGGACCCGGGAGCCGAGGAGTTCAGGCCCAGAAACCCGAACCCGATACCCCTTTTCAGCCCACCACCACCGCCGCCTCTGCCACACCAAGTTTACTATCCCTACCCACCGCCACCGCCACCGCCCATGAACGAAGTGGTGGCGGTGCCCTACGTGCCGTCACCCGCGGCGTACGTTAGCGCGGTGACGGTGCAGGCCCCGATCCCGCCTCCGGCCGCTGGGCCGACTCGGGCGGTGCTGCTGAGGCCGGTGCCGTGTGACGTCAGCGAGGTGACGATTCGGCGTGAGTTGGAGGCGTTCGGGCAGGTGAGGTGGGTCCAGATGGAGAGGTCCTGCGACGGGATCGTGACCGTCCATTTCTACGATCTCAGGCATGCAGAGAAGGCCTTGGCTGAGATTCGGGACCAGCACATGCAACACCAACAACCCACCCGCCCTCCTCGTAATTCCGGTCCGTACCACCGGAGCCCCTCCGCCGTGATTGTCAGCCCCGACGTGTGGGCCCACTTCGTGATTCCGGTGCACACCGCAATCCCCGACGGCCACAACCAAGGCACCATCGTGATTTTCAATCTCGACTCGGCGGTGACCACCTCCAGCGTCAGGCAGACGTTCCAAGCTTTTGGTGCCGTGAAGGAATTGAGGGAGACACCTTCGAAGAAGCACCAGAAATTCGTGGAGTTTTTCGATGTCAGACACGCTGCTAGAGCTCTCAAGGAGATGAACGGGAAGGAGATCCATGGCAAACAGATTGTGATCGAGTTCAGTCGCCCCGGAGGCAACAGCTGGAAGAAGCTGAATTCTCTCACCACCACTGCCGTCCCAACTGTCGTCTCTGCCAACGTTGCGTCGCCTGAGTTATATCTGCCCGAACCGTTCTCCGGGCACTCTCGTTTCAATGCAGTCTCGCCGCTACTGTATGGTTCACAAGGCCAGTTTTCGACTAGGACTAATTCGGCAAGTGGAAATGTTGGTGTGGAGTCTCTAGTGGCGGAGTTGAATTTGGGCGGTGGAATTGAAGAGAGGGAGTCAGTGGGGCATTCGAGAAGGGCTTCGTCGAAGAAGCAAAGCAGCCAGGCAATGGTAACAAGTCCAAGGCGGCTGCAGCAACCGCCGCCACCGCCACCGAGGAGTAGTAGGGGAAAGAGAGGAAAGCAGCCCAAGAAGTATGATACTCGGTTTCTAATCAAAGAAGACGTCATGGTCGAATCCACAAGCGATTCAAGAACCACTCTGATGATCAAAAACATACCGAACAAATACAGTCAGAAGCTGCTATTGAGTATGCTGGACAACCACTGCATTCACTGCAACGAACAGATTCTTCGCGACGGCGATGAAGACCAGCCTTTGTCCTCCTACGATTTCGTATATCTTCCCATTGATTTCAATAACAAATGCAATGTAGGTTATGGGTTTGTGAACATGACAAGCCCAGAGGCAACATGGAGGCTTTACAAAGCCTTTCATCACCAAAATTGGGAGGTCTTCAACTCCCGAAAAATCTGTGAAGTCACCTACGCAAGAGTTCAGGGATTGGAAGCGTTGAAAGAGCACTTCAAGAACTCGAAGTTCCCGAGTGAAATGGATCACTACTTGCCGGTTGTTTTTTCGCCTCCCCGGGATGGCAAGCTTCTGACGGATCCACTCCCCATCTTCGGCATCCAACACAAGTCCGGCAGCAACTCCTCCGCCGCCGTTAATCACCCCATTACTCTCCTCCTGCCTCCATCACATCAACATAACCATGATGACATGGATGACTCTGACCACTGTAGTAGCCGTAACGGCGGCGTTCTGGGTATTAATGACGACCAGGACGACGACGACCAAGACAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_2

Protein Analysis

626

Amino Acids

69.55

Weight (kDa)

7.15

Isoelectric Point (pI)

56.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	199 - 263	8.3e-11	RNA recognition motif
RRM_2	PF04059	421 - 533	5e-33	RNA recognition motif 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26120
fragaria_vesca	FvH4_4g25250 FvH4_4g25250 FvH4_4g25250
malus_domestica	MD13G1105600.v1.1 MD16G1105800.v1.1
prunus_persica	Prupe.1G240800_v2.0.a1 Prupe.1G240800_v2.0.a1
pyrus_communis	pycom13g09160
rosa_chinensis	RchiOBHm_Chr4g0432441
rosa_laevigata	RLG00000006842
rosa_multiflora	Rmu_co8411925.1_g000001 Rmu_sc0001084.1_g000018 Rmu_sc0038130.1_g000001
rosa_roxburghii	Rroxscaffold_3G00239560 Rroxscaffold_5G00373920
rosa_rugosa	Rorug04G0259000
rosa_samantha	Rh4AG314300 Rh4BG322100 Rh4CG337200 Rh4DG317800
rosa_wichuraiana	Rw4G027330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	331
AasI	GACNNNNNNGTC	1 cut(s)	1238
AatII	GACGTC	2 cut(s)	300, 1236
Acc36I	ACCTGC	1 cut(s)	331
AccB1I	GGYRCC	4 cut(s)	181, 286, 590, 662
AccB7I	CCANNNNNTGG	1 cut(s)	1117
AccII	CGCG	3 cut(s)	203, 218, 1365
AclI	AACGTT	1 cut(s)	879
AclWI	GGATC	6 cut(s)	232, 386, 766, 1632, 1673, 1686
AcoI	YGGCCR	2 cut(s)	249, 577
AcsI	RAATTY	3 cut(s)	707, 835, 1036
AcyI	GRCGYC	2 cut(s)	297, 1233
AdeI	CACNNNGTG	1 cut(s)	547
AfaI	GTAC	2 cut(s)	209, 494
AflIII	ACRYGT	1 cut(s)	531
AgeI	ACCGGT	1 cut(s)	11
AgsI	TTSAA	9 cut(s)	607, 934, 1036, 1055, 1260, 1426, 1528, 1585, 1597
AjiI	CACGTC	1 cut(s)	532
AjnI	CCWGG	3 cut(s)	36, 1110, 1851
AleI	CACNNNNGTG	1 cut(s)	596
AluBI	AGCT	7 cut(s)	656, 746, 822, 832, 1309, 1669, 1875
AluI	AGCT	7 cut(s)	656, 746, 822, 832, 1309, 1669, 1875
Alw21I	GWGCWC	3 cut(s)	561, 748, 1593
Alw26I	GTCTC	4 cut(s)	677, 874, 946, 1023
Alw44I	GTGCAC	1 cut(s)	557
AlwI	GGATC	6 cut(s)	232, 386, 766, 1632, 1673, 1686
AlwNI	CAGNNNCTG	1 cut(s)	1309
Ama87I	CYCGRG	4 cut(s)	43, 264, 1612, 1656
ApaI	GGGCCC	1 cut(s)	541
ApaLI	GTGCAC	1 cut(s)	557
ApeKI	GCWGC	8 cut(s)	274, 737, 1107, 1138, 1141, 1192, 1309, 1716
ApoI	RAATTY	3 cut(s)	707, 835, 1036
ArsI	GACNNNNNNTTYG	2 cut(s)	1218, 1250
AseI	ATTAAT	1 cut(s)	1842
AsiGI	ACCGGT	1 cut(s)	11
Asp700I	GAANNNNTTC	2 cut(s)	1087, 1356
AspLEI	GCGC	1 cut(s)	218
AsuC2I	CCSGG	7 cut(s)	30, 44, 45, 810, 919, 1657, 1658
AsuHPI	GGTGA	9 cut(s)	189, 232, 319, 355, 634, 835, 1499, 1543, 1733
AsuII	TTCGAA	1 cut(s)	692
AvaI	CYCGRG	4 cut(s)	43, 264, 1612, 1656
AvaII	GGWCC	5 cut(s)	40, 352, 366, 439, 488
BaeGI	GKGCMC	4 cut(s)	186, 541, 561, 924
BamHI	GGATCC	1 cut(s)	1678
BanI	GGYRCC	4 cut(s)	181, 286, 590, 662
BanII	GRGCYC	3 cut(s)	506, 541, 748
BbsI	GAAGAC	3 cut(s)	1236, 1383, 1516
Bbv12I	GWGCWC	3 cut(s)	561, 748, 1593
BbvCI	CCTCAGC	1 cut(s)	278
BbvI	GCAGC	8 cut(s)	261, 724, 1119, 1125, 1153, 1204, 1296, 1728
BccI	CCATC	5 cut(s)	352, 602, 1655, 1697, 1774
BciT130I	CCWGG	3 cut(s)	38, 1112, 1853
BclI	TGATCA	1 cut(s)	1275
BcnI	CCSGG	7 cut(s)	30, 44, 45, 810, 919, 1657, 1658
BcoDI	GTCTC	4 cut(s)	677, 874, 946, 1023
BfaI	CTAG	4 cut(s)	741, 981, 1022, 1876
BfmI	CTRYAG	2 cut(s)	1139, 1810
BfuAI	ACCTGC	1 cut(s)	331
BglI	GCCNNNNNGGC	2 cut(s)	813, 1824
Bme18I	GGWCC	5 cut(s)	40, 352, 366, 439, 488
BmeT110I	CYCGRG	4 cut(s)	43, 264, 1612, 1656
BmgBI	CACGTC	1 cut(s)	532
BmsI	GCATC	1 cut(s)	1707
BpiI	GAAGAC	3 cut(s)	1236, 1383, 1516
BpmI	CTGGAG	1 cut(s)	616
Bpu10I	CCTNAGC	1 cut(s)	278
Bpu14I	TTCGAA	1 cut(s)	692
BpuEI	CTTGAG	1 cut(s)	734
BpuMI	CCSGG	7 cut(s)	30, 44, 45, 810, 919, 1657, 1658
BsaAI	YACGTR	1 cut(s)	190
BsaBI	GATNNNNATC	1 cut(s)	791
BsaHI	GRCGYC	2 cut(s)	297, 1233
BsaWI	WCCGGW	5 cut(s)	11, 21, 485, 498, 553
BsaXI	ACNNNNNCTCC	2 cut(s)	457, 487
Bse118I	RCCGGY	3 cut(s)	11, 283, 1636
Bse1I	ACTGG	1 cut(s)	970
Bse3DI	GCAATG	2 cut(s)	1122, 1444
Bse8I	GATNNNNATC	1 cut(s)	791
BseBI	CCWGG	3 cut(s)	38, 1112, 1853
BseGI	GGATG	3 cut(s)	1666, 1698, 1801
BseJI	GATNNNNATC	1 cut(s)	791
BseMI	GCAATG	2 cut(s)	1122, 1444
BseMII	CTCAG	4 cut(s)	269, 418, 420, 882
BseNI	ACTGG	1 cut(s)	970
BseRI	GAGGAG	5 cut(s)	68, 465, 1180, 1714, 1745
BseSI	GKGCMC	4 cut(s)	186, 541, 561, 924
BseX3I	CGGCCG	1 cut(s)	249
BseXI	GCAGC	8 cut(s)	261, 724, 1119, 1125, 1153, 1204, 1296, 1728
BseYI	CCCAGC	1 cut(s)	254
BsgI	GTGCAG	1 cut(s)	248
Bsh1236I	CGCG	3 cut(s)	203, 218, 1365
Bsh1285I	CGRYCG	1 cut(s)	252
BshNI	GGYRCC	4 cut(s)	181, 286, 590, 662
BshTI	ACCGGT	1 cut(s)	11
BsiEI	CGRYCG	1 cut(s)	252
BsiHKAI	GWGCWC	3 cut(s)	561, 748, 1593
BsiHKCI	CYCGRG	4 cut(s)	43, 264, 1612, 1656
BsiWI	CGTACG	1 cut(s)	207
BslFI	GGGAC	2 cut(s)	452, 842
BsmAI	GTCTC	4 cut(s)	677, 874, 946, 1023
BsmBI	CGTCTC	1 cut(s)	874
BsmFI	GGGAC	2 cut(s)	452, 842
BsmI	GAATGC	2 cut(s)	1075, 1338
BsoBI	CYCGRG	4 cut(s)	43, 264, 1612, 1656
Bsp119I	TTCGAA	1 cut(s)	692
Bsp120I	GGGCCC	1 cut(s)	537
Bsp1286I	GDGCHC	7 cut(s)	186, 506, 541, 561, 748, 924, 1593
Bsp143I	GATC	8 cut(s)	237, 378, 400, 771, 792, 1275, 1624, 1678
Bsp19I	CCATGG	1 cut(s)	775
Bsp68I	TCGCGA	1 cut(s)	1365
BspCNI	CTCAG	4 cut(s)	270, 417, 421, 883
BspFNI	CGCG	3 cut(s)	203, 218, 1365
BspMAI	CTGCAG	1 cut(s)	1143
BspMI	ACCTGC	1 cut(s)	331
BspPI	GGATC	6 cut(s)	232, 386, 766, 1632, 1673, 1686
BspT104I	TTCGAA	1 cut(s)	692
BspT107I	GGYRCC	4 cut(s)	181, 286, 590, 662
BsrDI	GCAATG	2 cut(s)	1122, 1444
BsrFI	RCCGGY	3 cut(s)	11, 283, 1636
BsrI	ACTGG	1 cut(s)	970
BssAI	RCCGGY	3 cut(s)	11, 283, 1636
BssMI	GATC	8 cut(s)	237, 378, 400, 771, 792, 1275, 1624, 1678
BssNI	GRCGYC	2 cut(s)	297, 1233
BssT1I	CCWWGG	4 cut(s)	423, 586, 775, 1130
Bst2UI	CCWGG	3 cut(s)	38, 1112, 1853
Bst4CI	ACNGT	7 cut(s)	226, 388, 865, 912, 954, 1301, 1811
Bst6I	CTCTTC	1 cut(s)	1050
BstACI	GRCGYC	2 cut(s)	297, 1233
BstAPI	GCANNNNNTGC	1 cut(s)	1344
BstBAI	YACGTR	1 cut(s)	190
BstBI	TTCGAA	1 cut(s)	692
BstC8I	GCNNGC	3 cut(s)	231, 411, 1667
BstDEI	CTNAG	4 cut(s)	278, 404, 429, 891
BstDSI	CCRYGG	2 cut(s)	201, 775
BstEII	GGTNACC	1 cut(s)	622
BstF5I	GGATG	3 cut(s)	1666, 1698, 1801
BstFNI	CGCG	3 cut(s)	203, 218, 1365
BstHHI	GCGC	1 cut(s)	218
BstKTI	GATC	8 cut(s)	240, 381, 403, 774, 795, 1278, 1627, 1681
BstMAI	GTCTC	4 cut(s)	677, 874, 946, 1023
BstMBI	GATC	8 cut(s)	237, 378, 400, 771, 792, 1275, 1624, 1678
BstMCI	CGRYCG	1 cut(s)	252
BstNI	CCWGG	3 cut(s)	38, 1112, 1853
BstNSI	RCATGY	2 cut(s)	413, 451
BstPI	GGTNACC	1 cut(s)	622
BstSFI	CTRYAG	2 cut(s)	1139, 1810
BstSLI	GKGCMC	4 cut(s)	186, 541, 561, 924
BstUI	CGCG	3 cut(s)	203, 218, 1365
BstV1I	GCAGC	8 cut(s)	261, 724, 1119, 1125, 1153, 1204, 1296, 1728
BstV2I	GAAGAC	3 cut(s)	1236, 1383, 1516
BstX2I	RGATCY	2 cut(s)	771, 1678
BstXI	CCANNNNNNTGG	1 cut(s)	659
BstYI	RGATCY	2 cut(s)	771, 1678
BstZI	CGGCCG	1 cut(s)	249
BtgI	CCRYGG	2 cut(s)	201, 775
BtgZI	GCGATG	1 cut(s)	1386
BtrI	CACGTC	1 cut(s)	532
BtsCI	GGATG	3 cut(s)	1666, 1698, 1801
BtsI	GCAGTG	3 cut(s)	849, 1333, 1342
BtsIMutI	CAGTG	5 cut(s)	849, 1074, 1333, 1342, 1807
BtuMI	TCGCGA	1 cut(s)	1365
BveI	ACCTGC	1 cut(s)	331
Cac8I	GCNNGC	3 cut(s)	231, 411, 1667
CaiI	CAGNNNCTG	1 cut(s)	1309
CfoI	GCGC	1 cut(s)	218
Cfr10I	RCCGGY	3 cut(s)	11, 283, 1636
Cfr42I	CCGCGG	1 cut(s)	204
Cfr9I	CCCGGG	2 cut(s)	43, 1656
CpoI	CGGWCCG	1 cut(s)	488
CseI	GACGC	2 cut(s)	625, 873
Csp6I	GTAC	2 cut(s)	208, 493
CspAI	ACCGGT	1 cut(s)	11
CspI	CGGWCCG	1 cut(s)	488
CviAII	CATG	9 cut(s)	163, 410, 448, 776, 1237, 1462, 1482, 1784, 1792
CviQI	GTAC	2 cut(s)	208, 493
DdeI	CTNAG	4 cut(s)	278, 404, 429, 891
DpnI	GATC	8 cut(s)	239, 380, 402, 773, 794, 1277, 1626, 1680
DpnII	GATC	8 cut(s)	237, 378, 400, 771, 792, 1275, 1624, 1678
DraIII	CACNNNGTG	1 cut(s)	547
DrdI	GACNNNNNNGTC	1 cut(s)	1238
DseDI	GACNNNNNNGTC	1 cut(s)	1238
EaeI	YGGCCR	2 cut(s)	249, 577
EagI	CGGCCG	1 cut(s)	249
Eam1104I	CTCTTC	1 cut(s)	1050
EarI	CTCTTC	1 cut(s)	1050
EciI	GGCGGA	3 cut(s)	499, 1043, 1717
Ecl136II	GAGCTC	1 cut(s)	746
EclXI	CGGCCG	1 cut(s)	249
Eco130I	CCWWGG	4 cut(s)	423, 586, 775, 1130
Eco147I	AGGCCT	1 cut(s)	422
Eco24I	GRGCYC	3 cut(s)	506, 541, 748
Eco47I	GGWCC	5 cut(s)	40, 352, 366, 439, 488
Eco52I	CGGCCG	1 cut(s)	249
Eco53kI	GAGCTC	1 cut(s)	746
Eco88I	CYCGRG	4 cut(s)	43, 264, 1612, 1656
Eco91I	GGTNACC	1 cut(s)	622
EcoICRI	GAGCTC	1 cut(s)	746
EcoO109I	RGGNCCY	2 cut(s)	232, 366
EcoO65I	GGTNACC	1 cut(s)	622
EcoRI	GAATTC	1 cut(s)	835
EcoRII	CCWGG	3 cut(s)	36, 1110, 1851
EcoT14I	CCWWGG	4 cut(s)	423, 586, 775, 1130
EcoT38I	GRGCYC	3 cut(s)	506, 541, 748
ErhI	CCWWGG	4 cut(s)	423, 586, 775, 1130
Esp3I	CGTCTC	1 cut(s)	874
FaeI	CATG	9 cut(s)	166, 413, 451, 779, 1240, 1465, 1485, 1787, 1795
FaqI	GGGAC	2 cut(s)	452, 842
FatI	CATG	9 cut(s)	162, 409, 447, 775, 1236, 1461, 1481, 1783, 1791
FauI	CCCGC	3 cut(s)	208, 249, 476
FbaI	TGATCA	1 cut(s)	1275
FokI	GGATG	3 cut(s)	1673, 1685, 1808
FriOI	GRGCYC	3 cut(s)	506, 541, 748
FspBI	CTAG	4 cut(s)	741, 981, 1022, 1876
GlaI	GCGC	1 cut(s)	217
GsaI	CCCAGC	1 cut(s)	258
GsuI	CTGGAG	1 cut(s)	616
HgaI	GACGC	2 cut(s)	625, 873
HhaI	GCGC	1 cut(s)	218
Hin1I	GRCGYC	2 cut(s)	297, 1233
Hin1II	CATG	9 cut(s)	166, 413, 451, 779, 1240, 1465, 1485, 1787, 1795
Hin6I	GCGC	1 cut(s)	216
HinP1I	GCGC	1 cut(s)	216
HindIII	AAGCTT	2 cut(s)	654, 1667
HphI	GGTGA	9 cut(s)	189, 232, 319, 355, 634, 835, 1499, 1543, 1733
Hpy166II	GTNNAC	4 cut(s)	130, 559, 962, 1459
Hpy188I	TCNGA	5 cut(s)	731, 1272, 1305, 1674, 1804
Hpy8I	GTNNAC	4 cut(s)	130, 559, 962, 1459
Hpy99I	CGWCG	8 cut(s)	377, 533, 578, 889, 1096, 1370, 1862, 1865
HpyAV	CCTTC	5 cut(s)	412, 664, 699, 760, 1077
HpyCH4III	ACNGT	7 cut(s)	226, 388, 865, 912, 954, 1301, 1811
HpyCH4IV	ACGT	7 cut(s)	189, 210, 297, 531, 647, 879, 1233
HpyCH4V	TGCA	9 cut(s)	229, 413, 451, 559, 938, 1141, 1338, 1347, 1437
HpyF3I	CTNAG	4 cut(s)	278, 404, 429, 891
HpySE526I	ACGT	7 cut(s)	189, 210, 297, 531, 647, 879, 1233
Hsp92I	GRCGYC	2 cut(s)	297, 1233
Hsp92II	CATG	9 cut(s)	166, 413, 451, 779, 1240, 1465, 1485, 1787, 1795
HspAI	GCGC	1 cut(s)	216
Ksp22I	TGATCA	1 cut(s)	1275
KspI	CCGCGG	1 cut(s)	204
Kzo9I	GATC	8 cut(s)	237, 378, 400, 771, 792, 1275, 1624, 1678
LmnI	GCTCC	2 cut(s)	47, 501
Lsp1109I	GCAGC	8 cut(s)	261, 724, 1119, 1125, 1153, 1204, 1296, 1728
LweI	GCATC	1 cut(s)	1707
MaeI	CTAG	4 cut(s)	741, 981, 1022, 1876
MaeII	ACGT	7 cut(s)	189, 210, 297, 531, 647, 879, 1233
MaeIII	GTNAC	9 cut(s)	195, 220, 293, 307, 382, 622, 1120, 1549, 1820
MalI	GATC	8 cut(s)	239, 380, 402, 773, 794, 1277, 1626, 1680
MboI	GATC	8 cut(s)	237, 378, 400, 771, 792, 1275, 1624, 1678
MflI	RGATCY	2 cut(s)	771, 1678
MhlI	GDGCHC	7 cut(s)	186, 506, 541, 561, 748, 924, 1593
MluCI	AATT	8 cut(s)	481, 674, 707, 835, 988, 1036, 1050, 1513
MlyI	GAGTC	5 cut(s)	256, 608, 1025, 1073, 1793
MmeI	TCCRAC	2 cut(s)	306, 1726
MroXI	GAANNNNTTC	2 cut(s)	1087, 1356
MseI	TTAA	2 cut(s)	1737, 1842
MslI	CAYNNNNRTG	3 cut(s)	596, 1271, 1782
MspA1I	CMGCKG	3 cut(s)	203, 254, 822
Mva1269I	GAATGC	2 cut(s)	1075, 1338
MvaI	CCWGG	3 cut(s)	38, 1112, 1853
MvnI	CGCG	3 cut(s)	203, 218, 1365
NciI	CCSGG	7 cut(s)	30, 44, 45, 810, 919, 1657, 1658
NcoI	CCATGG	1 cut(s)	775
NdeII	GATC	8 cut(s)	237, 378, 400, 771, 792, 1275, 1624, 1678
NlaIII	CATG	9 cut(s)	166, 413, 451, 779, 1240, 1465, 1485, 1787, 1795
NmeAIII	GCCGAG	2 cut(s)	76, 596
NmuCI	GTSAC	7 cut(s)	195, 220, 293, 307, 382, 622, 1549
NruI	TCGCGA	1 cut(s)	1365
NspI	RCATGY	2 cut(s)	413, 451
NspV	TTCGAA	1 cut(s)	692
OliI	CACNNNNGTG	1 cut(s)	596
PaeI	GCATGC	1 cut(s)	413
PaqCI	CACCTGC	1 cut(s)	331
PceI	AGGCCT	1 cut(s)	422
PcsI	WCGNNNNNNNCGW	3 cut(s)	1239, 1610, 1854
PctI	GAATGC	2 cut(s)	1075, 1338
PdmI	GAANNNNTTC	2 cut(s)	1087, 1356
PfeI	GAWTC	6 cut(s)	313, 433, 550, 1244, 1256, 1357
Pfl23II	CGTACG	1 cut(s)	207
PflMI	CCANNNNNTGG	1 cut(s)	1117
PinAI	ACCGGT	1 cut(s)	11
PleI	GAGTC	5 cut(s)	256, 608, 1024, 1072, 1793
PpsI	GAGTC	5 cut(s)	256, 608, 1024, 1072, 1793
Ppu21I	YACGTR	1 cut(s)	190
PpuMI	RGGWCCY	1 cut(s)	366
PshBI	ATTAAT	1 cut(s)	1842
Psp124BI	GAGCTC	1 cut(s)	748
Psp1406I	AACGTT	1 cut(s)	879
Psp5II	RGGWCCY	1 cut(s)	366
Psp6I	CCWGG	3 cut(s)	36, 1110, 1851
PspEI	GGTNACC	1 cut(s)	622
PspFI	CCCAGC	1 cut(s)	254
PspGI	CCWGG	3 cut(s)	36, 1110, 1851
PspLI	CGTACG	1 cut(s)	207
PspOMI	GGGCCC	1 cut(s)	537
PspPPI	RGGWCCY	1 cut(s)	366
PstI	CTGCAG	1 cut(s)	1143
PstNI	CAGNNNCTG	1 cut(s)	1309
PsuI	RGATCY	2 cut(s)	771, 1678
PvuII	CAGCTG	1 cut(s)	822
RruI	TCGCGA	1 cut(s)	1365
RsaI	GTAC	2 cut(s)	209, 494
RsaNI	GTAC	2 cut(s)	208, 493
RseI	CAYNNNNRTG	3 cut(s)	596, 1271, 1782
Rsr2I	CGGWCCG	1 cut(s)	488
RsrII	CGGWCCG	1 cut(s)	488
SacI	GAGCTC	1 cut(s)	748
SacII	CCGCGG	1 cut(s)	204
SaqAI	TTAA	2 cut(s)	1737, 1842
Sau3AI	GATC	8 cut(s)	237, 378, 400, 771, 792, 1275, 1624, 1678
SchI	GAGTC	5 cut(s)	256, 608, 1025, 1073, 1793
SduI	GDGCHC	7 cut(s)	186, 506, 541, 561, 748, 924, 1593
SfaNI	GCATC	1 cut(s)	1707
SfcI	CTRYAG	2 cut(s)	1139, 1810
Sfr303I	CCGCGG	1 cut(s)	204
SfuI	TTCGAA	1 cut(s)	692
SgrBI	CCGCGG	1 cut(s)	204
SinI	GGWCC	5 cut(s)	40, 352, 366, 439, 488
SmaI	CCCGGG	2 cut(s)	45, 1658
SmiMI	CAYNNNNRTG	3 cut(s)	596, 1271, 1782
SmlI	CTYRAG	1 cut(s)	749
SmoI	CTYRAG	1 cut(s)	749
SphI	GCATGC	1 cut(s)	413
Sse9I	AATT	8 cut(s)	481, 674, 707, 835, 988, 1036, 1050, 1513
SseBI	AGGCCT	1 cut(s)	422
SspMI	CTAG	4 cut(s)	741, 981, 1022, 1876
SstI	GAGCTC	1 cut(s)	748
StuI	AGGCCT	1 cut(s)	422
StyI	CCWWGG	4 cut(s)	423, 586, 775, 1130
TaaI	ACNGT	7 cut(s)	226, 388, 865, 912, 954, 1301, 1811
TaiI	ACGT	7 cut(s)	192, 213, 300, 534, 650, 882, 1236
TaqI	TCGA	9 cut(s)	612, 692, 723, 795, 977, 1079, 1094, 1242, 1604
TasI	AATT	8 cut(s)	481, 674, 707, 835, 988, 1036, 1050, 1513
TauI	GCSGC	8 cut(s)	112, 206, 254, 949, 1138, 1153, 1733, 1830
TfiI	GAWTC	6 cut(s)	313, 433, 550, 1244, 1256, 1357
Tru1I	TTAA	2 cut(s)	1737, 1842
Tru9I	TTAA	2 cut(s)	1737, 1842
TscAI	CASTG	5 cut(s)	856, 1074, 1340, 1349, 1814
TseFI	GTSAC	7 cut(s)	195, 220, 293, 307, 382, 622, 1549
TseI	GCWGC	8 cut(s)	274, 737, 1107, 1138, 1141, 1192, 1309, 1716
Tsp45I	GTSAC	7 cut(s)	195, 220, 293, 307, 382, 622, 1549
TspDTI	ATGAA	4 cut(s)	179, 773, 1389, 1493
TspGWI	ACGGA	2 cut(s)	480, 1691
TspMI	CCCGGG	2 cut(s)	43, 1656
TspRI	CASTG	5 cut(s)	856, 1074, 1340, 1349, 1814
Van91I	CCANNNNNTGG	1 cut(s)	1117
VneI	GTGCAC	1 cut(s)	557
VpaK11BI	GGWCC	5 cut(s)	40, 352, 366, 439, 488
VspI	ATTAAT	1 cut(s)	1842
XapI	RAATTY	3 cut(s)	707, 835, 1036
XceI	RCATGY	2 cut(s)	413, 451
XcmI	CCANNNNNNNNNTGG	2 cut(s)	169, 1479
XmaI	CCCGGG	2 cut(s)	43, 1656
XmnI	GAANNNNTTC	2 cut(s)	1087, 1356
XspI	CTAG	4 cut(s)	741, 981, 1022, 1876
ZraI	GACGTC	2 cut(s)	298, 1234

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.