FvH4_4g30740

membrane

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0005229
Physical Location & Seq
Reverse (-)
30222013 .. 30226535
4523 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g30740.t1

Sequence Viewer

Length: 2082 bp
ATGCTCGTCTCGGCGCTGGTGACGTCACTGGCCATAAACTCCGGCCTGTGCATTCTGTTCTTCACGCTCTACTCCATCCTGAGGAAGCAGCCGAGCAACTCCGAGGTCTACATACCGCGAGTTCTGGCCGAGGGCGGTTACAAGAAGACCAGCCATTTCAACCTGGAGAGGCTGATTCCTTCTCCCGATTGGCTCCGACGGGCATGGAAGCTCTCCGAGGACGACTTGCTCGCCACCTCCGGTTTGGACGCCGTTGTTTTCATGCGGCTCATTAATTTCAGCCTCAGAGTGTTCCTCTTCGCCGGAGTTATCGGAGTTTTCGTGCTGCTTCCGGTGAACTGCTCCGGCGATGCTCTCGAGTATGTTGACTTCACCGATCTGTCTAATAACTCTCTGGATGTGTTTAGTATTTCGAATATCAGCAGCGGCTCTAGCATGTTATGGATTCACTTTACGGCGGTGTACCTTGTCACAATCTTTATCTGCTGCCTGCTCTATTATGAATATAGATATATTTCTGAAAAGAGGACTAGTTATTTTCTTGCGTCCAAGCCTCAGCCACATCAGTTCACCATCCTAGTTCGCAGCATTCCTGTTCCTGTAGGGAGCAGCGTCAGTGAAAGTGTAGAGAGCTTCTTTAGCGAGTATCACCCTTCTACATATCTGTCGCATAGTGTTGTTCGTCGAACAAACAAACTTCAGAATCTCATTAATGATGCCAAAAAATTGTATGGCAGACTCGTTCACTTGCAATCAGATCCCAATAAGCAAAAGTATAAACGTTCCGGTACTTTTGGGTTGTTCGGACCCAAGGTTAATCTTGTAGATCATTACGAAAAGAAACTTGAGGACATAGAGGAGAATGTGAGATTGGGGCAATCAGAGGTTTCATTAGCAGAAGAAGAAGTTCGAGCTGCTTTTGTGTCCTTCAAGTCTCGGTATGGTGCTGCAATTGCTTTCCACTTGCAACAATCGACTAATCCAACACGATGGGTGACAGAGCTAGCTCCTGAACCACAGGATGTTTATTGGCCCTTCTTTTCCTCATCATTTTTTCGAAGATGGATATCTAAGCTGGTGGTTATAATTGCATGCATTCTTCTTACAATCCTATTCCTTATTCCTGTTGTACTTGTTCAAGGTCTCACTAACCTTACCCAGTTGGAAGTCTACTTTCCCTTCCTCACGAGCATTCTAACCATAACATTTGGCTTTTCATCCATTCAAGGCTATATTTCTTTTAGTGCAATACAAAAGAGTGCGTGTGAAAAAGTACTTTGGTTCACAGTATGGAACATTTTTTTTGCGACTGTATTTTCTGGATCTGTATTCTACAAGATTTCCATCTTTCTTGATCCTAAGAACATTCCTGCAAAGCTAGCTTCTGCTGTTCCTGCACAGGCGTCCTTTTTCATTGCATACGTTGTCACATCAGGATGGACGAGTACTTCAACAGAACTCTTTCGCATAATTCCTTTACTTTGGAGTCTAATGAAAAGACCTTTTACTGACAGTAAAGATGATGAACTTGAAGTTCCAGCCATTAATTACCATGTTCACATACCTAGAGTTCTCTTTTTTGTACTTCTTGGTATCACATACTTCTTTCTAGCTCCACTAATTCTGCCTTTCCTATTGGCGTACCTCTGTCTCGGATACATCGTATATCGTAATCAGTTCATAAATGTATATGCGCCTCGGTATGAAACTGCGGGGAAGTTCTGGCCCATCGCTCACAATTCAGTGATATTTTCTCTGGTACTTATGCATGCTATTGCTGTTGGAGTCTTTACATTGAAGACGGTCCCTGTGGCATCAACCTTAACTTTCCCTCTTCCTGTGTTCACACTTCTTTTTAATGAGTACTGCCGAAAACGCTTCCTGCCCAATTTTACTGCTTATCCTGCTGAGAGTTTGTTGAAAAAGGACAGGCAAGATGAGAATGATCCTACGATGCCTGAATTTTACACTAAATTGATTGGTACCTATCAAGACCCGGCTTTGATGCCTATCAATTTTTCTGCAAACGGTGAGAGACTCAGAAGCCCTCTTCTATCTGCTTCTTCTTCAAGTCACTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PHM7_cyt RSN1_7TM RSN1_TM

Protein Analysis

694

Amino Acids

78.71

Weight (kDa)

8.82

Isoelectric Point (pI)

49.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RSN1_TM PF13967 5 - 168 1.8e-37 Late exocytosis, associated with Golgi transport
PHM7_cyt PF14703 189 - 345 1.4e-38 Cytosolic domain of 10TM putative phosphate transporter
RSN1_7TM PF02714 404 - 597 1.5e-55 Calcium-dependent channel, 7TM region, putative phosphate
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1085
AatII GACGTC 1 cut(s) 26
Acc65I GGTACC 1 cut(s) 1982
AccB1I GGYRCC 1 cut(s) 1982
AccI GTMKAC 2 cut(s) 108, 1170
AccII CGCG 1 cut(s) 118
AciI CCGC 6 cut(s) 116, 135, 265, 426, 458, 1712
AclI AACGTT 1 cut(s) 781
AclWI GGATC 4 cut(s) 752, 1330, 1349, 1940
AcoI YGGCCR 2 cut(s) 30, 126
AcsI RAATTY 1 cut(s) 1961
AcuI CTGAAG 1 cut(s) 683
AcyI GRCGYC 3 cut(s) 23, 249, 1403
AfiI CCNNNNNNNGG 1 cut(s) 81
AgsI TTSAA 9 cut(s) 160, 931, 1139, 1226, 1452, 1532, 1798, 1921, 2070
AhlI ACTAGT 1 cut(s) 530
AjnI CCWGG 1 cut(s) 162
AjuI GAANNNNNNNTTGG 2 cut(s) 854, 886
AluBI AGCT 9 cut(s) 211, 633, 914, 1003, 1007, 1075, 1378, 1382, 1613
AluI AGCT 9 cut(s) 211, 633, 914, 1003, 1007, 1075, 1378, 1382, 1613
Alw26I GTCTC 5 cut(s) 13, 939, 1148, 1655, 2029
AlwI GGATC 4 cut(s) 752, 1330, 1349, 1940
Ama87I CYCGRG 1 cut(s) 356
AoxI GGCC 5 cut(s) 30, 43, 126, 1031, 1724
ApeKI GCWGC 8 cut(s) 88, 325, 423, 486, 585, 609, 914, 947
ApoI RAATTY 1 cut(s) 1961
AseI ATTAAT 3 cut(s) 273, 711, 1545
Asp700I GAANNNNTTC 2 cut(s) 906, 1461
Asp718I GGTACC 1 cut(s) 1982
AspLEI GCGC 2 cut(s) 16, 1696
AspS9I GGNCC 4 cut(s) 806, 1032, 1725, 1804
AsuC2I CCSGG 1 cut(s) 1997
AsuHPI GGTGA 7 cut(s) 31, 346, 364, 562, 641, 1006, 2042
AsuII TTCGAA 2 cut(s) 413, 1057
AsuNHI GCTAGC 2 cut(s) 1003, 1378
AvaI CYCGRG 1 cut(s) 356
AvaII GGWCC 2 cut(s) 806, 1804
AxyI CCTNAGG 1 cut(s) 80
BalI TGGCCA 1 cut(s) 32
BanI GGYRCC 1 cut(s) 1982
BarI GAAGNNNNNNTAC 2 cut(s) 353, 385
BauI CACGAG 1 cut(s) 1186
BbsI GAAGAC 2 cut(s) 152, 1805
BbvCI CCTCAGC 1 cut(s) 555
BbvI GCAGC 8 cut(s) 100, 312, 435, 473, 597, 621, 901, 934
BccI CCATC 7 cut(s) 83, 581, 984, 1056, 1352, 1431, 1736
BceAI ACGGC 2 cut(s) 236, 471
BciT130I CCWGG 1 cut(s) 164
BciVI GTATCC 1 cut(s) 1649
BcnI CCSGG 1 cut(s) 1997
BcoDI GTCTC 5 cut(s) 13, 939, 1148, 1655, 2029
BcuI ACTAGT 1 cut(s) 530
BfaI CTAG 7 cut(s) 432, 531, 578, 1004, 1379, 1566, 1610
BfmI CTRYAG 1 cut(s) 600
BfoI RGCGCY 1 cut(s) 17
BfuI GTATCC 1 cut(s) 1649
BmcAI AGTACT 3 cut(s) 1275, 1447, 1865
Bme1390I CCNGG 2 cut(s) 164, 1997
Bme18I GGWCC 2 cut(s) 806, 1804
BmeT110I CYCGRG 1 cut(s) 356
BmgT120I GGNCC 4 cut(s) 806, 1032, 1725, 1804
BmiI GGNNCC 4 cut(s) 194, 808, 1806, 1984
BmrFI CCNGG 2 cut(s) 164, 1997
BmrI ACTGGG 1 cut(s) 1153
BmsI GCATC 5 cut(s) 340, 706, 1823, 1944, 1995
BmtI GCTAGC 2 cut(s) 1007, 1382
BmuI ACTGGG 1 cut(s) 1153
BpiI GAAGAC 2 cut(s) 152, 1805
BplI GAGNNNNNCTC 2 cut(s) 279, 311
BpmI CTGGAG 1 cut(s) 185
Bpu10I CCTNAGC 1 cut(s) 555
Bpu14I TTCGAA 2 cut(s) 413, 1057
BpuEI CTTGAG 1 cut(s) 866
BpuMI CCSGG 1 cut(s) 1997
BsaBI GATNNNNATC 3 cut(s) 1066, 1343, 2009
BsaHI GRCGYC 3 cut(s) 23, 249, 1403
BsaI GGTCTC 1 cut(s) 1148
BsaJI CCNNGG 5 cut(s) 102, 129, 216, 810, 1697
BsaWI WCCGGW 3 cut(s) 239, 331, 785
BsaXI ACNNNNNCTCC 2 cut(s) 306, 336
Bsc4I CCNNNNNNNGG 1 cut(s) 81
Bse1I ACTGG 2 cut(s) 33, 1159
Bse21I CCTNAGG 1 cut(s) 80
Bse3DI GCAATG 1 cut(s) 1413
Bse8I GATNNNNATC 3 cut(s) 1066, 1343, 2009
BseBI CCWGG 1 cut(s) 164
BseDI CCNNGG 5 cut(s) 102, 129, 216, 810, 1697
BseGI GGATG 6 cut(s) 75, 403, 573, 1027, 1217, 1442
BseJI GATNNNNATC 3 cut(s) 1066, 1343, 2009
BseLI CCNNNNNNNGG 1 cut(s) 81
BseMI GCAATG 1 cut(s) 1413
BseMII CTCAG 5 cut(s) 71, 298, 569, 1899, 2053
BseNI ACTGG 2 cut(s) 33, 1159
BseRI GAGGAG 1 cut(s) 872
BseXI GCAGC 8 cut(s) 100, 312, 435, 473, 597, 621, 901, 934
BsgI GTGCAG 1 cut(s) 1380
Bsh1236I CGCG 1 cut(s) 118
BshFI GGCC 5 cut(s) 32, 45, 128, 1033, 1726
BshNI GGYRCC 1 cut(s) 1982
BsiHKCI CYCGRG 1 cut(s) 356
BsiSI CCGG 7 cut(s) 42, 240, 303, 332, 345, 786, 1997
BslFI GGGAC 1 cut(s) 1790
BslI CCNNNNNNNGG 1 cut(s) 81
BsmAI GTCTC 5 cut(s) 13, 939, 1148, 1655, 2029
BsmBI CGTCTC 1 cut(s) 13
BsmFI GGGAC 1 cut(s) 1790
BsmI GAATGC 4 cut(s) 51, 588, 1095, 1191
BsnI GGCC 5 cut(s) 32, 45, 128, 1033, 1726
Bso31I GGTCTC 1 cut(s) 1148
BsoBI CYCGRG 1 cut(s) 356
Bsp119I TTCGAA 2 cut(s) 413, 1057
Bsp143I GATC 6 cut(s) 376, 757, 826, 1322, 1354, 1945
BspACI CCGC 6 cut(s) 116, 135, 265, 426, 458, 1712
BspANI GGCC 5 cut(s) 32, 45, 128, 1033, 1726
BspCNI CTCAG 5 cut(s) 72, 297, 568, 1900, 2052
BspFNI CGCG 1 cut(s) 118
BspHI TCATGA 1 cut(s) 2078
BspLI GGNNCC 4 cut(s) 194, 808, 1806, 1984
BspOI GCTAGC 2 cut(s) 1007, 1382
BspPI GGATC 4 cut(s) 752, 1330, 1349, 1940
BspT104I TTCGAA 2 cut(s) 413, 1057
BspT107I GGYRCC 1 cut(s) 1982
BspTNI GGTCTC 1 cut(s) 1148
BsrDI GCAATG 1 cut(s) 1413
BsrI ACTGG 2 cut(s) 33, 1159
BssECI CCNNGG 5 cut(s) 102, 129, 216, 810, 1697
BssMI GATC 6 cut(s) 376, 757, 826, 1322, 1354, 1945
BssNI GRCGYC 3 cut(s) 23, 249, 1403
BssSI CACGAG 1 cut(s) 1186
BssT1I CCWWGG 1 cut(s) 810
Bst2BI CACGAG 1 cut(s) 1186
Bst2UI CCWGG 1 cut(s) 164
Bst4CI ACNGT 5 cut(s) 1288, 1312, 1514, 1804, 2030
Bst6I CTCTTC 3 cut(s) 302, 1839, 2055
BstACI GRCGYC 3 cut(s) 23, 249, 1403
BstBI TTCGAA 2 cut(s) 413, 1057
BstC8I GCNNGC 6 cut(s) 231, 491, 1005, 1093, 1380, 1770
BstDEI CTNAG 7 cut(s) 80, 284, 555, 1071, 1359, 1908, 2039
BstF5I GGATG 6 cut(s) 75, 403, 573, 1027, 1217, 1442
BstFNI CGCG 1 cut(s) 118
BstH2I RGCGCY 1 cut(s) 17
BstHHI GCGC 2 cut(s) 16, 1696
BstKTI GATC 6 cut(s) 379, 760, 829, 1325, 1357, 1948
BstMAI GTCTC 5 cut(s) 13, 939, 1148, 1655, 2029
BstMBI GATC 6 cut(s) 376, 757, 826, 1322, 1354, 1945
BstMWI GCNNNNNNNGC 7 cut(s) 432, 639, 953, 1379, 1394, 1875, 1904
BstNI CCWGG 1 cut(s) 164
BstNSI RCATGY 3 cut(s) 439, 1095, 1772
BstSCI CCNGG 2 cut(s) 162, 1995
BstSFI CTRYAG 1 cut(s) 600
BstUI CGCG 1 cut(s) 118
BstV1I GCAGC 8 cut(s) 100, 312, 435, 473, 597, 621, 901, 934
BstV2I GAAGAC 2 cut(s) 152, 1805
BstX2I RGATCY 2 cut(s) 757, 1322
BstXI CCANNNNNNTGG 1 cut(s) 990
BstYI RGATCY 2 cut(s) 757, 1322
Bsu36I CCTNAGG 1 cut(s) 80
BsuI GTATCC 1 cut(s) 1649
BsuRI GGCC 5 cut(s) 32, 45, 128, 1033, 1726
BtgZI GCGATG 2 cut(s) 363, 1714
BtsCI GGATG 6 cut(s) 75, 403, 573, 1027, 1217, 1442
BtsIMutI CAGTG 3 cut(s) 26, 622, 1749
Cac8I GCNNGC 6 cut(s) 231, 491, 1005, 1093, 1380, 1770
CciI TCATGA 1 cut(s) 2078
CfoI GCGC 2 cut(s) 16, 1696
Cfr13I GGNCC 4 cut(s) 806, 1032, 1725, 1804
CseI GACGC 4 cut(s) 257, 534, 601, 1392
CviAII CATG 7 cut(s) 204, 262, 436, 1092, 1553, 1769, 2079
DdeI CTNAG 7 cut(s) 80, 284, 555, 1071, 1359, 1908, 2039
DpnI GATC 6 cut(s) 378, 759, 828, 1324, 1356, 1947
DpnII GATC 6 cut(s) 376, 757, 826, 1322, 1354, 1945
EaeI YGGCCR 2 cut(s) 30, 126
Eam1104I CTCTTC 3 cut(s) 302, 1839, 2055
EarI CTCTTC 3 cut(s) 302, 1839, 2055
Eco130I CCWWGG 1 cut(s) 810
Eco31I GGTCTC 1 cut(s) 1148
Eco32I GATATC 1 cut(s) 1068
Eco47I GGWCC 2 cut(s) 806, 1804
Eco57I CTGAAG 1 cut(s) 683
Eco81I CCTNAGG 1 cut(s) 80
Eco88I CYCGRG 1 cut(s) 356
EcoRII CCWGG 1 cut(s) 162
EcoRV GATATC 1 cut(s) 1068
EcoT14I CCWWGG 1 cut(s) 810
EcoT22I ATGCAT 2 cut(s) 1097, 1770
ErhI CCWWGG 1 cut(s) 810
Esp3I CGTCTC 1 cut(s) 13
FaeI CATG 7 cut(s) 207, 265, 439, 1095, 1556, 1772, 2082
FaqI GGGAC 1 cut(s) 1790
FatI CATG 7 cut(s) 203, 261, 435, 1091, 1552, 1768, 2078
FauI CCCGC 1 cut(s) 1705
FblI GTMKAC 2 cut(s) 108, 1170
FokI GGATG 6 cut(s) 62, 410, 560, 1034, 1204, 1449
FspBI CTAG 7 cut(s) 432, 531, 578, 1004, 1379, 1566, 1610
GlaI GCGC 2 cut(s) 15, 1695
GsuI CTGGAG 1 cut(s) 185
HaeII RGCGCY 1 cut(s) 17
HaeIII GGCC 5 cut(s) 32, 45, 128, 1033, 1726
HapII CCGG 7 cut(s) 42, 240, 303, 332, 345, 786, 1997
HgaI GACGC 4 cut(s) 257, 534, 601, 1392
HhaI GCGC 2 cut(s) 16, 1696
Hin1I GRCGYC 3 cut(s) 23, 249, 1403
Hin1II CATG 7 cut(s) 207, 265, 439, 1095, 1556, 1772, 2082
Hin6I GCGC 2 cut(s) 14, 1694
HinP1I GCGC 2 cut(s) 14, 1694
HincII GTYRAC 1 cut(s) 367
HindII GTYRAC 1 cut(s) 367
HinfI GANTC 7 cut(s) 175, 445, 703, 738, 1486, 1785, 2037
HpaII CCGG 7 cut(s) 42, 240, 303, 332, 345, 786, 1997
HphI GGTGA 7 cut(s) 31, 346, 364, 562, 641, 1006, 2042
Hpy99I CGWCG 2 cut(s) 201, 687
HpyAV CCTTC 5 cut(s) 189, 663, 937, 1045, 1189
HpyCH4III ACNGT 5 cut(s) 1288, 1312, 1514, 1804, 2030
HpyCH4IV ACGT 3 cut(s) 23, 781, 1422
HpyF10VI GCNNNNNNNGC 7 cut(s) 432, 639, 953, 1379, 1394, 1875, 1904
HpyF3I CTNAG 7 cut(s) 80, 284, 555, 1071, 1359, 1908, 2039
HpySE526I ACGT 3 cut(s) 23, 781, 1422
Hsp92I GRCGYC 3 cut(s) 23, 249, 1403
Hsp92II CATG 7 cut(s) 207, 265, 439, 1095, 1556, 1772, 2082
HspAI GCGC 2 cut(s) 14, 1694
KpnI GGTACC 1 cut(s) 1986
Kzo9I GATC 6 cut(s) 376, 757, 826, 1322, 1354, 1945
LmnI GCTCC 5 cut(s) 198, 347, 606, 1012, 1618
Lsp1109I GCAGC 8 cut(s) 100, 312, 435, 473, 597, 621, 901, 934
LweI GCATC 5 cut(s) 340, 706, 1823, 1944, 1995
MaeI CTAG 7 cut(s) 432, 531, 578, 1004, 1379, 1566, 1610
MaeII ACGT 3 cut(s) 23, 781, 1422
MaeIII GTNAC 7 cut(s) 19, 24, 137, 469, 994, 1426, 2072
MalI GATC 6 cut(s) 378, 759, 828, 1324, 1356, 1947
MboI GATC 6 cut(s) 376, 757, 826, 1322, 1354, 1945
MfeI CAATTG 1 cut(s) 951
MflI RGATCY 2 cut(s) 757, 1322
MlsI TGGCCA 1 cut(s) 32
MluNI TGGCCA 1 cut(s) 32
MlyI GAGTC 4 cut(s) 732, 1495, 1794, 2031
MmeI TCCRAC 4 cut(s) 220, 1007, 1143, 1762
Mox20I TGGCCA 1 cut(s) 32
Mph1103I ATGCAT 2 cut(s) 1097, 1770
MroXI GAANNNNTTC 2 cut(s) 906, 1461
MscI TGGCCA 1 cut(s) 32
MseI TTAA 6 cut(s) 273, 711, 816, 1545, 1823, 1857
MslI CAYNNNNRTG 1 cut(s) 1435
Msp20I TGGCCA 1 cut(s) 32
MspA1I CMGCKG 1 cut(s) 426
MspI CCGG 7 cut(s) 42, 240, 303, 332, 345, 786, 1997
MspR9I CCNGG 2 cut(s) 164, 1997
MunI CAATTG 1 cut(s) 951
Mva1269I GAATGC 4 cut(s) 51, 588, 1095, 1191
MvaI CCWGG 1 cut(s) 164
MvnI CGCG 1 cut(s) 118
MwoI GCNNNNNNNGC 7 cut(s) 432, 639, 953, 1379, 1394, 1875, 1904
NciI CCSGG 1 cut(s) 1997
NdeII GATC 6 cut(s) 376, 757, 826, 1322, 1354, 1945
NheI GCTAGC 2 cut(s) 1003, 1378
NlaIII CATG 7 cut(s) 207, 265, 439, 1095, 1556, 1772, 2082
NlaIV GGNNCC 4 cut(s) 194, 808, 1806, 1984
NmeAIII GCCGAG 2 cut(s) 117, 154
NmuCI GTSAC 6 cut(s) 19, 24, 469, 994, 1426, 2072
NsiI ATGCAT 2 cut(s) 1097, 1770
NspI RCATGY 3 cut(s) 439, 1095, 1772
NspV TTCGAA 2 cut(s) 413, 1057
PaeI GCATGC 2 cut(s) 1095, 1772
PaeR7I CTCGAG 1 cut(s) 356
PagI TCATGA 1 cut(s) 2078
PcsI WCGNNNNNNNCGW 2 cut(s) 318, 1659
PctI GAATGC 4 cut(s) 51, 588, 1095, 1191
PdmI GAANNNNTTC 2 cut(s) 906, 1461
PfeI GAWTC 3 cut(s) 175, 445, 703
PleI GAGTC 4 cut(s) 732, 1494, 1793, 2031
PpsI GAGTC 4 cut(s) 732, 1494, 1793, 2031
PshBI ATTAAT 3 cut(s) 273, 711, 1545
PsiI TTATAA 1 cut(s) 1085
Psp1406I AACGTT 1 cut(s) 781
Psp6I CCWGG 1 cut(s) 162
PspGI CCWGG 1 cut(s) 162
PspN4I GGNNCC 4 cut(s) 194, 808, 1806, 1984
PspPI GGNCC 4 cut(s) 806, 1032, 1725, 1804
PsuI RGATCY 2 cut(s) 757, 1322
RseI CAYNNNNRTG 1 cut(s) 1435
SaqAI TTAA 6 cut(s) 273, 711, 816, 1545, 1823, 1857
Sau3AI GATC 6 cut(s) 376, 757, 826, 1322, 1354, 1945
Sau96I GGNCC 4 cut(s) 806, 1032, 1725, 1804
ScaI AGTACT 3 cut(s) 1275, 1447, 1865
SchI GAGTC 4 cut(s) 732, 1495, 1794, 2031
ScrFI CCNGG 2 cut(s) 164, 1997
SfaNI GCATC 5 cut(s) 340, 706, 1823, 1944, 1995
SfcI CTRYAG 1 cut(s) 600
Sfr274I CTCGAG 1 cut(s) 356
SfuI TTCGAA 2 cut(s) 413, 1057
SinI GGWCC 2 cut(s) 806, 1804
SlaI CTCGAG 1 cut(s) 356
SmiMI CAYNNNNRTG 1 cut(s) 1435
SmlI CTYRAG 2 cut(s) 356, 845
SmoI CTYRAG 2 cut(s) 356, 845
SpeI ACTAGT 1 cut(s) 530
SphI GCATGC 2 cut(s) 1095, 1772
SsiI CCGC 6 cut(s) 116, 135, 265, 426, 458, 1712
SspMI CTAG 7 cut(s) 432, 531, 578, 1004, 1379, 1566, 1610
StyD4I CCNGG 2 cut(s) 162, 1995
StyI CCWWGG 1 cut(s) 810
TaaI ACNGT 5 cut(s) 1288, 1312, 1514, 1804, 2030
TaiI ACGT 3 cut(s) 26, 784, 1425
TaqI TCGA 6 cut(s) 357, 413, 685, 910, 974, 1057
TatI WGTACW 5 cut(s) 1129, 1273, 1445, 1582, 1863
TauI GCSGC 2 cut(s) 268, 429
TfiI GAWTC 3 cut(s) 175, 445, 703
Tru1I TTAA 6 cut(s) 273, 711, 816, 1545, 1823, 1857
Tru9I TTAA 6 cut(s) 273, 711, 816, 1545, 1823, 1857
TscAI CASTG 3 cut(s) 33, 622, 1749
TseFI GTSAC 6 cut(s) 19, 24, 469, 994, 1426, 2072
TseI GCWGC 8 cut(s) 88, 325, 423, 486, 585, 609, 914, 947
Tsp45I GTSAC 6 cut(s) 19, 24, 469, 994, 1426, 2072
TspDTI ATGAA 9 cut(s) 250, 516, 879, 1206, 1402, 1508, 1539, 1669, 1719
TspRI CASTG 3 cut(s) 33, 622, 1749
VpaK11BI GGWCC 2 cut(s) 806, 1804
VspI ATTAAT 3 cut(s) 273, 711, 1545
XapI RAATTY 1 cut(s) 1961
XceI RCATGY 3 cut(s) 439, 1095, 1772
XcmI CCANNNNNNNNNTGG 1 cut(s) 241
XhoI CTCGAG 1 cut(s) 356
XmiI GTMKAC 2 cut(s) 108, 1170
XmnI GAANNNNTTC 2 cut(s) 906, 1461
XspI CTAG 7 cut(s) 432, 531, 578, 1004, 1379, 1566, 1610
ZraI GACGTC 1 cut(s) 24
ZrmI AGTACT 3 cut(s) 1275, 1447, 1865
Zsp2I ATGCAT 2 cut(s) 1097, 1770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.