FvH4_4g36580

ADP-ribosylation factor GTPase-activating protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0007229
Physical Location & Seq
Reverse (-)
33456323 .. 33464187
7865 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g36580.t1

Sequence Viewer

Length: 2406 bp
ATGGCAGCATTTATCAAGCTCGAAGATTCCCCAATGTTTCAGAAGCAGGTATGTAATCTAGAACAGACAGCTGATGAGTTGAAAGACCGATGCCAGAAGCTTCTAAAAGGGTGTAAGAAGTTTGTGGCGGCTCTTGGTGAAGCATGTGCTGGCGACACCACTTTCGCAGATTCATTGGAAGCATTTGGTGGTGATCTGGATGATCCTATAAGTGTTGCAATAGGAGGTCCAGTACTATCCAAATTCATTTCTGCATTTCGAGAGCTTGCTACATATAAAGAGCTTCTTCGCACCCAAGTAGAGCATGTGCTAGTCAATCGGTTGATGCACTTTATGACAGTTGATCTGCAAGATGCAAAGGATTCCCGACGCCGCTTTGACAAGGCAATACATGTTTATGATCAGTCACGGGAAAAGTTTGTATCCTTGAAGAAGAATACACGGGGAGACATTGTTTCTGAACTAGAGGAGACAAATTTTCTCTTATATCTGTACCTGTCTTATCATCCCTTGACAGGATCTACAAAATTCAAAATCAGCATTCGAGAAAGGCCGCTTCAACCTAGACTGCAGGTAAATTCCCTAATGAATATTGAAGCAAAAAAGAAGTATGAATTTTTGGAATCTGTTAGTGCGATCATGGATGGTCATCTAAGATACTTTAAGCTGGGATATGAGTTATTGAGCCAAATGGAGCCATATATTCACCAGGTGTTAACATATGCACAACAGTCTAAAGAACAGGCAACTATTGAACAAGATAAACTTCACAAAAGGATTCAGGAATTTAGGACACAAGCTGAGCTGGATAGTATACGAGCTTTCAGTAACTTTGAGGCTTCTGGAGGGCTTGAAGGACATCGTCCCTTTGGTTTGTCTTCATACAAAAATGTAGAACCAATCATGCAGAACCTTGAAAATGGGAAGCCACAGACAGTCAAGCAAGGATATCTCCTGAAACGATCGTCAAATTTGAGGGGAGACTGGAAGAGGAGGTTTTTTGTACTGAACAGTCAAGGGGCTTTATTTTATTACAGAATCAAGGGTACCAAACCCATGGGATCTCAAGCACATCACTTTACACGTTCAACTGAACATAACAGCGGTGTGTTCGGGAGATTCCGCTCAAAACATAGGGCATCATCACTTAATGAAAACATTCTGGGCTGCCGAACTGTTGATCTGCGCACCTCAACAATTAAGATGGATGCAGAAGATACAGACCTCCGACTTTGCTTCAGAATAATATCCCCATTGAAAACGTACACATTACAGGCTGAAAATGAGGCTGATAGGATGGATTGGATGAACAAAATAACAGGAGCTATTACATCTCTGCTGAATTCTCAGCTTCTTGAACAGCCACATCCAGGGATTGCGAATCTCGAGAATAGTAAATTTGATGATGGTGATGTTCATCGAGTAGCTAGCTGTGAAAGCTTACATAACTTACAATTCAATAGAGTTGATTCTGTTTCTACTGCTCTTAGGGGAATCCCTGGAAATGGTCTTTGTGCAGAGTGTAGTAGTCCTGAGCCTGATTGGGCATCTCTTAATCTTGGGATACTGTTATGCATCGAATGTTCTGGTGCTCATCGGAATCTTGGAGTACATGTTTCAAAGGTGAGATCTATAACGTTAGATGTCAAAATTTGGGAACCGACAATTGTGGACTTATTTCGCAACTTGGGTAATGCTTTCTGTAATTCAGTGTGGGAGGGAAAGCTTCTACTCCCAAGTGAAAGTTCGGATGGCTCAAATGCCATTAGGGCTTCAATTTCAAAACCATGCCCCCAAGATGCAATTCAGCATAAGGAAATTTACATTCAAGCAAAGTATGTAGAGAAAGTGATGGTCATTAGAGATGTAGCTGCACCTGTCCTTGCAGCAACAATATGGGAAGCAGTAAAGACTAGTAACTTGCAAGAAGTCTATCGGCTTATCGCGATATCAGATATGAATATCGTTGACACCACCTATGATGAGGTGGTTGGCAATGAATTATATCACCCTGTTGATGCACAAGACCCAGAGATGAGTTTTCCCCCAATAGAGAGCAATCAACACGATCCTTCAGCATGTGAGAGAATCAAGACTTCCACTGATCAAGGGAACTGCCTTCAAGGTTGTTCATTATTGCATCTGGCTTGTCACTCTGGCAATGCCATGATGCTTGAATTGTTGCTGCAATTTGGTGCCAACATAAATAGGCGTGATTTTCATGGAAGGACTCCTTTACACCACTGTATCTGCAGTGGAAAAAATTCGCTGGCGAAGTTTCTACTTGGAAGAGGTGCACGCCCATCAATTCAAGATGGAGGAGGGCAAAGCGCACTTGAAAGAGCAATGGAGATGGGAGCAATTACTGATGAGGAATTATTCATAAGACTTTCTGAAAATGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_5 ArfGap BAR_3 PH

Protein Analysis

802

Amino Acids

90.08

Weight (kDa)

6.51

Isoelectric Point (pI)

43.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAR_3 PF16746 7 - 155 1.1e-20 BAR domain of APPL family
BAR PF03114 18 - 147 2e-06 BAR domain
BAR_3 PF16746 192 - 255 7.5e-08 BAR domain of APPL family
PH PF00169 313 - 443 1.8e-12 PH domain
ArfGap PF01412 493 - 618 1.2e-29 Putative GTPase activating protein for Arf
Ank_2 PF12796 693 - 772 2.7e-12 Ankyrin repeats (3 copies)
Ank_5 PF13857 705 - 748 5.5e-06 Ankyrin repeats (many copies)
Ank PF00023 709 - 739 1.7e-06 Ankyrin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1187
Acc36I ACCTGC 2 cut(s) 37, 562
Acc65I GGTACC 1 cut(s) 1046
AccB1I GGYRCC 2 cut(s) 1046, 2195
AccBSI CCGCTC 1 cut(s) 1125
AccI GTMKAC 1 cut(s) 814
AccII CGCG 1 cut(s) 1946
AciI CCGC 5 cut(s) 128, 373, 554, 1104, 1123
AclI AACGTT 1 cut(s) 1637
AclWI GGATC 4 cut(s) 197, 526, 1069, 2063
AcuI CTGAAG 2 cut(s) 1222, 2058
AcyI GRCGYC 1 cut(s) 370
AdeI CACNNNGTG 1 cut(s) 712
AfaI GTAC 6 cut(s) 234, 494, 1005, 1048, 1265, 1611
AfiI CCNNNNNNNGG 3 cut(s) 515, 1370, 1505
AflIII ACRYGT 3 cut(s) 391, 1082, 1612
AhlI ACTAGT 1 cut(s) 1913
AjnI CCWGG 3 cut(s) 708, 1369, 1498
AjuI GAANNNNNNNTTGG 4 cut(s) 1729, 1761, 1788, 1820
Alw21I GWGCWC 2 cut(s) 1594, 2299
Alw26I GTCTC 3 cut(s) 441, 464, 975
Alw44I GTGCAC 1 cut(s) 2295
AlwI GGATC 4 cut(s) 197, 526, 1069, 2063
Ama87I CYCGRG 1 cut(s) 1385
AoxI GGCC 1 cut(s) 551
ApaLI GTGCAC 1 cut(s) 2295
ApeKI GCWGC 5 cut(s) 5, 1167, 1871, 1886, 2185
ArsI GACNNNNNNTTYG 2 cut(s) 146, 178
Asp700I GAANNNNTTC 2 cut(s) 1158, 2263
Asp718I GGTACC 1 cut(s) 1046
AspLEI GCGC 2 cut(s) 1188, 2333
AspS9I GGNCC 1 cut(s) 227
AsuHPI GGTGA 6 cut(s) 149, 203, 698, 1421, 1636, 2000
AsuNHI GCTAGC 1 cut(s) 1427
AvaI CYCGRG 1 cut(s) 1385
AvaII GGWCC 1 cut(s) 227
BaeGI GKGCMC 1 cut(s) 2299
BaeI ACNNNNGTAYC 2 cut(s) 2230, 2263
BanI GGYRCC 2 cut(s) 1046, 2195
BbsI GAAGAC 1 cut(s) 870
Bbv12I GWGCWC 2 cut(s) 1594, 2299
BbvI GCAGC 5 cut(s) 17, 1154, 1858, 1898, 2172
BccI CCATC 9 cut(s) 638, 1198, 1291, 1400, 1745, 1846, 2309, 2311, 2347
BciT130I CCWGG 3 cut(s) 710, 1371, 1500
BciVI GTATCC 2 cut(s) 433, 1557
BclI TGATCA 2 cut(s) 400, 2104
BcoDI GTCTC 3 cut(s) 441, 464, 975
BcuI ACTAGT 1 cut(s) 1913
BfaI CTAG 6 cut(s) 59, 311, 464, 564, 1428, 1914
BfmI CTRYAG 2 cut(s) 569, 2251
BfuAI ACCTGC 2 cut(s) 37, 562
BfuI GTATCC 2 cut(s) 433, 1557
BglI GCCNNNNNGGC 1 cut(s) 1769
BglII AGATCT 1 cut(s) 1628
BisI GCNGC 8 cut(s) 6, 129, 373, 554, 1168, 1872, 1887, 2186
BlpI GCTNAGC 1 cut(s) 801
BlsI GCNGC 8 cut(s) 7, 130, 374, 555, 1169, 1873, 1888, 2187
BmcAI AGTACT 1 cut(s) 234
Bme1390I CCNGG 3 cut(s) 710, 1371, 1500
Bme18I GGWCC 1 cut(s) 227
BmeT110I CYCGRG 1 cut(s) 1385
BmgT120I GGNCC 1 cut(s) 227
BmiI GGNNCC 4 cut(s) 696, 1048, 1659, 2197
BmrFI CCNGG 3 cut(s) 710, 1371, 1500
BmtI GCTAGC 1 cut(s) 1431
BpiI GAAGAC 1 cut(s) 870
BpmI CTGGAG 1 cut(s) 864
Bpu10I CCTNAGC 1 cut(s) 1533
Bpu1102I GCTNAGC 1 cut(s) 801
BpuEI CTTGAG 1 cut(s) 1050
BsaBI GATNNNNATC 2 cut(s) 648, 1416
BsaHI GRCGYC 1 cut(s) 370
BsaJI CCNNGG 3 cut(s) 1056, 1370, 1498
BsaXI ACNNNNNCTCC 6 cut(s) 216, 246, 438, 468, 1599, 1629
Bsc4I CCNNNNNNNGG 3 cut(s) 515, 1370, 1505
Bse1I ACTGG 2 cut(s) 230, 989
Bse3DI GCAATG 3 cut(s) 2002, 2167, 2352
Bse8I GATNNNNATC 2 cut(s) 648, 1416
BseBI CCWGG 3 cut(s) 710, 1371, 1500
BseDI CCNNGG 3 cut(s) 1056, 1370, 1498
BseGI GGATG 8 cut(s) 205, 505, 649, 1213, 1302, 1311, 1366, 1756
BseJI GATNNNNATC 2 cut(s) 648, 1416
BseLI CCNNNNNNNGG 3 cut(s) 515, 1370, 1505
BseMI GCAATG 3 cut(s) 2002, 2167, 2352
BseMII CTCAG 3 cut(s) 792, 1361, 1524
BseNI ACTGG 2 cut(s) 230, 989
BseRI GAGGAG 3 cut(s) 482, 1006, 2334
BseSI GKGCMC 1 cut(s) 2299
BseXI GCAGC 5 cut(s) 17, 1154, 1858, 1898, 2172
BseYI CCCAGC 1 cut(s) 667
BsgI GTGCAG 2 cut(s) 1536, 1857
Bsh1236I CGCG 1 cut(s) 1946
Bsh1285I CGRYCG 1 cut(s) 965
BshFI GGCC 1 cut(s) 553
BshNI GGYRCC 2 cut(s) 1046, 2195
BsiEI CGRYCG 1 cut(s) 965
BsiHKAI GWGCWC 2 cut(s) 1594, 2299
BsiHKCI CYCGRG 1 cut(s) 1385
BslFI GGGAC 1 cut(s) 849
BslI CCNNNNNNNGG 3 cut(s) 515, 1370, 1505
BsmAI GTCTC 3 cut(s) 441, 464, 975
BsmFI GGGAC 1 cut(s) 849
BsmI GAATGC 1 cut(s) 540
BsnI GGCC 1 cut(s) 553
BsoBI CYCGRG 1 cut(s) 1385
Bsp1286I GDGCHC 2 cut(s) 1594, 2299
Bsp1720I GCTNAGC 1 cut(s) 801
Bsp19I CCATGG 1 cut(s) 1056
Bsp68I TCGCGA 1 cut(s) 1946
BspACI CCGC 5 cut(s) 128, 373, 554, 1104, 1123
BspANI GGCC 1 cut(s) 553
BspCNI CTCAG 3 cut(s) 793, 1360, 1525
BspFNI CGCG 1 cut(s) 1946
BspLI GGNNCC 4 cut(s) 696, 1048, 1659, 2197
BspMAI CTGCAG 2 cut(s) 573, 2255
BspMI ACCTGC 2 cut(s) 37, 562
BspOI GCTAGC 1 cut(s) 1431
BspPI GGATC 4 cut(s) 197, 526, 1069, 2063
BspT107I GGYRCC 2 cut(s) 1046, 2195
BsrBI CCGCTC 1 cut(s) 1125
BsrDI GCAATG 3 cut(s) 2002, 2167, 2352
BsrI ACTGG 2 cut(s) 230, 989
BssECI CCNNGG 3 cut(s) 1056, 1370, 1498
BssNAI GTATAC 1 cut(s) 815
BssNI GRCGYC 1 cut(s) 370
BssT1I CCWWGG 1 cut(s) 1056
Bst1107I GTATAC 1 cut(s) 815
Bst2UI CCWGG 3 cut(s) 710, 1371, 1500
Bst4CI ACNGT 7 cut(s) 340, 732, 937, 1013, 1177, 1569, 2246
Bst6I CTCTTC 2 cut(s) 983, 2284
BstACI GRCGYC 1 cut(s) 370
BstC8I GCNNGC 5 cut(s) 151, 267, 1429, 2271, 2299
BstDEI CTNAG 5 cut(s) 653, 801, 1347, 1487, 1533
BstDSI CCRYGG 1 cut(s) 1056
BstF5I GGATG 8 cut(s) 205, 505, 649, 1213, 1302, 1311, 1366, 1756
BstFNI CGCG 1 cut(s) 1946
BstHHI GCGC 2 cut(s) 1188, 2333
BstMAI GTCTC 3 cut(s) 441, 464, 975
BstMCI CGRYCG 1 cut(s) 965
BstMWI GCNNNNNNNGC 2 cut(s) 1437, 1769
BstNI CCWGG 3 cut(s) 710, 1371, 1500
BstNSI RCATGY 5 cut(s) 147, 308, 395, 1616, 2082
BstSCI CCNGG 3 cut(s) 708, 1369, 1498
BstSFI CTRYAG 2 cut(s) 569, 2251
BstSLI GKGCMC 1 cut(s) 2299
BstUI CGCG 1 cut(s) 1946
BstV1I GCAGC 5 cut(s) 17, 1154, 1858, 1898, 2172
BstV2I GAAGAC 1 cut(s) 870
BstX2I RGATCY 3 cut(s) 518, 1061, 1628
BstXI CCANNNNNNTGG 1 cut(s) 1057
BstYI RGATCY 3 cut(s) 518, 1061, 1628
BstZ17I GTATAC 1 cut(s) 815
BsuI GTATCC 2 cut(s) 433, 1557
BsuRI GGCC 1 cut(s) 553
BtgI CCRYGG 1 cut(s) 1056
BtsCI GGATG 8 cut(s) 205, 505, 649, 1213, 1302, 1311, 1366, 1756
BtsI GCAGTG 1 cut(s) 2260
BtsIMutI CAGTG 4 cut(s) 1716, 2100, 2242, 2260
BtuMI TCGCGA 1 cut(s) 1946
BveI ACCTGC 2 cut(s) 37, 562
Cac8I GCNNGC 5 cut(s) 151, 267, 1429, 2271, 2299
CfoI GCGC 2 cut(s) 1188, 2333
Cfr13I GGNCC 1 cut(s) 227
CseI GACGC 1 cut(s) 378
CsiI ACCWGGT 1 cut(s) 708
Csp6I GTAC 6 cut(s) 233, 493, 1004, 1047, 1264, 1610
CviQI GTAC 6 cut(s) 233, 493, 1004, 1047, 1264, 1610
DdeI CTNAG 5 cut(s) 653, 801, 1347, 1487, 1533
DraIII CACNNNGTG 1 cut(s) 712
Eam1104I CTCTTC 2 cut(s) 983, 2284
EarI CTCTTC 2 cut(s) 983, 2284
Eco130I CCWWGG 1 cut(s) 1056
Eco32I GATATC 2 cut(s) 950, 1950
Eco47I GGWCC 1 cut(s) 227
Eco57I CTGAAG 2 cut(s) 1222, 2058
Eco88I CYCGRG 1 cut(s) 1385
EcoRI GAATTC 1 cut(s) 1342
EcoRII CCWGG 3 cut(s) 708, 1369, 1498
EcoRV GATATC 2 cut(s) 950, 1950
EcoT14I CCWWGG 1 cut(s) 1056
EcoT22I ATGCAT 1 cut(s) 1577
ErhI CCWWGG 1 cut(s) 1056
FalI AAGNNNNNCTT 6 cut(s) 270, 302, 750, 782, 2218, 2250
FaqI GGGAC 1 cut(s) 849
FauNDI CATATG 1 cut(s) 721
FbaI TGATCA 2 cut(s) 400, 2104
FblI GTMKAC 1 cut(s) 814
Fnu4HI GCNGC 8 cut(s) 6, 129, 373, 554, 1168, 1872, 1887, 2186
FokI GGATG 8 cut(s) 212, 492, 656, 1220, 1309, 1318, 1353, 1763
Fsp4HI GCNGC 8 cut(s) 6, 129, 373, 554, 1168, 1872, 1887, 2186
FspBI CTAG 6 cut(s) 59, 311, 464, 564, 1428, 1914
FspI TGCGCA 1 cut(s) 1187
GlaI GCGC 2 cut(s) 1187, 2332
GluI GCNGC 8 cut(s) 6, 129, 373, 554, 1168, 1872, 1887, 2186
GsaI CCCAGC 1 cut(s) 671
GsuI CTGGAG 1 cut(s) 864
HaeIII GGCC 1 cut(s) 553
HgaI GACGC 1 cut(s) 378
HhaI GCGC 2 cut(s) 1188, 2333
Hin1I GRCGYC 1 cut(s) 370
Hin6I GCGC 2 cut(s) 1186, 2331
HinP1I GCGC 2 cut(s) 1186, 2331
HincII GTYRAC 2 cut(s) 717, 1969
HindII GTYRAC 2 cut(s) 717, 1969
HindIII AAGCTT 3 cut(s) 98, 1438, 1724
HpaI GTTAAC 1 cut(s) 717
HphI GGTGA 6 cut(s) 149, 203, 698, 1421, 1636, 2000
Hpy166II GTNNAC 6 cut(s) 717, 815, 1266, 1672, 1969, 2297
Hpy188I TCNGA 8 cut(s) 42, 460, 1229, 1241, 1599, 1750, 1954, 2395
Hpy8I GTNNAC 6 cut(s) 717, 815, 1266, 1672, 1969, 2297
Hpy99I CGWCG 1 cut(s) 372
HpyAV CCTTC 4 cut(s) 848, 2082, 2129, 2220
HpyCH4III ACNGT 7 cut(s) 340, 732, 937, 1013, 1177, 1569, 2246
HpyCH4IV ACGT 3 cut(s) 1084, 1262, 1637
HpyF10VI GCNNNNNNNGC 2 cut(s) 1437, 1769
HpyF3I CTNAG 5 cut(s) 653, 801, 1347, 1487, 1533
HpySE526I ACGT 3 cut(s) 1084, 1262, 1637
Hsp92I GRCGYC 1 cut(s) 370
HspAI GCGC 2 cut(s) 1186, 2331
KpnI GGTACC 1 cut(s) 1050
Ksp22I TGATCA 2 cut(s) 400, 2104
KspAI GTTAAC 1 cut(s) 717
LmnI GCTCC 3 cut(s) 694, 1322, 2357
Lsp1109I GCAGC 5 cut(s) 17, 1154, 1858, 1898, 2172
MabI ACCWGGT 1 cut(s) 708
MaeI CTAG 6 cut(s) 59, 311, 464, 564, 1428, 1914
MaeII ACGT 3 cut(s) 1084, 1262, 1637
MaeIII GTNAC 4 cut(s) 405, 827, 1916, 2150
MbiI CCGCTC 1 cut(s) 1125
MboII GAAGA 8 cut(s) 35, 278, 442, 445, 870, 1000, 1226, 2301
MfeI CAATTG 1 cut(s) 1665
MflI RGATCY 3 cut(s) 518, 1061, 1628
MhlI GDGCHC 2 cut(s) 1594, 2299
MlyI GAGTC 1 cut(s) 2224
MmeI TCCRAC 1 cut(s) 1252
Mph1103I ATGCAT 1 cut(s) 1577
MroXI GAANNNNTTC 2 cut(s) 1158, 2263
MseI TTAA 5 cut(s) 663, 716, 1149, 1200, 1554
MslI CAYNNNNRTG 1 cut(s) 396
MspA1I CMGCKG 2 cut(s) 71, 1104
MspR9I CCNGG 3 cut(s) 710, 1371, 1500
MunI CAATTG 1 cut(s) 1665
Mva1269I GAATGC 1 cut(s) 540
MvaI CCWGG 3 cut(s) 710, 1371, 1500
MvnI CGCG 1 cut(s) 1946
MwoI GCNNNNNNNGC 2 cut(s) 1437, 1769
NcoI CCATGG 1 cut(s) 1056
NdeI CATATG 1 cut(s) 721
NheI GCTAGC 1 cut(s) 1427
NlaIV GGNNCC 4 cut(s) 696, 1048, 1659, 2197
NmuCI GTSAC 2 cut(s) 405, 2150
NruI TCGCGA 1 cut(s) 1946
NsbI TGCGCA 1 cut(s) 1187
NsiI ATGCAT 1 cut(s) 1577
NspI RCATGY 5 cut(s) 147, 308, 395, 1616, 2082
PaeR7I CTCGAG 1 cut(s) 1385
PciI ACATGT 2 cut(s) 391, 1612
PctI GAATGC 1 cut(s) 540
PdmI GAANNNNTTC 2 cut(s) 1158, 2263
PflFI GACNNNGTC 1 cut(s) 861
PkrI GCNGC 8 cut(s) 7, 130, 374, 555, 1169, 1873, 1888, 2187
Ple19I CGATCG 1 cut(s) 965
PleI GAGTC 1 cut(s) 2224
PpsI GAGTC 1 cut(s) 2224
PscI ACATGT 2 cut(s) 391, 1612
Psp1406I AACGTT 1 cut(s) 1637
Psp6I CCWGG 3 cut(s) 708, 1369, 1498
PspFI CCCAGC 1 cut(s) 667
PspGI CCWGG 3 cut(s) 708, 1369, 1498
PspN4I GGNNCC 4 cut(s) 696, 1048, 1659, 2197
PspPI GGNCC 1 cut(s) 227
PstI CTGCAG 2 cut(s) 573, 2255
PsuI RGATCY 3 cut(s) 518, 1061, 1628
PsyI GACNNNGTC 1 cut(s) 861
PvuI CGATCG 1 cut(s) 965
PvuII CAGCTG 1 cut(s) 71
RruI TCGCGA 1 cut(s) 1946
RsaI GTAC 6 cut(s) 234, 494, 1005, 1048, 1265, 1611
RsaNI GTAC 6 cut(s) 233, 493, 1004, 1047, 1264, 1610
RseI CAYNNNNRTG 1 cut(s) 396
SaqAI TTAA 5 cut(s) 663, 716, 1149, 1200, 1554
SatI GCNGC 8 cut(s) 6, 129, 373, 554, 1168, 1872, 1887, 2186
Sau96I GGNCC 1 cut(s) 227
ScaI AGTACT 1 cut(s) 234
SchI GAGTC 1 cut(s) 2224
ScrFI CCNGG 3 cut(s) 710, 1371, 1500
SduI GDGCHC 2 cut(s) 1594, 2299
SexAI ACCWGGT 1 cut(s) 708
SfcI CTRYAG 2 cut(s) 569, 2251
Sfr274I CTCGAG 1 cut(s) 1385
SinI GGWCC 1 cut(s) 227
SlaI CTCGAG 1 cut(s) 1385
SmiMI CAYNNNNRTG 1 cut(s) 396
SmlI CTYRAG 2 cut(s) 1065, 1385
SmoI CTYRAG 2 cut(s) 1065, 1385
SpeI ACTAGT 1 cut(s) 1913
SsiI CCGC 5 cut(s) 128, 373, 554, 1104, 1123
SspI AATATT 1 cut(s) 592
SspMI CTAG 6 cut(s) 59, 311, 464, 564, 1428, 1914
StyD4I CCNGG 3 cut(s) 708, 1369, 1498
StyI CCWWGG 1 cut(s) 1056
TaaI ACNGT 7 cut(s) 340, 732, 937, 1013, 1177, 1569, 2246
TaiI ACGT 3 cut(s) 1087, 1265, 1640
TaqI TCGA 6 cut(s) 21, 259, 544, 1386, 1420, 1578
TaqII GACCGA 1 cut(s) 102
TatI WGTACW 3 cut(s) 232, 1003, 1609
TauI GCSGC 3 cut(s) 131, 375, 556
Tru1I TTAA 5 cut(s) 663, 716, 1149, 1200, 1554
Tru9I TTAA 5 cut(s) 663, 716, 1149, 1200, 1554
TscAI CASTG 4 cut(s) 1716, 2107, 2249, 2260
TseFI GTSAC 2 cut(s) 405, 2150
TseI GCWGC 5 cut(s) 5, 1167, 1871, 1886, 2185
Tsp45I GTSAC 2 cut(s) 405, 2150
TspRI CASTG 4 cut(s) 1716, 2107, 2249, 2260
Tth111I GACNNNGTC 1 cut(s) 861
VneI GTGCAC 1 cut(s) 2295
VpaK11BI GGWCC 1 cut(s) 227
XbaI TCTAGA 1 cut(s) 58
XceI RCATGY 5 cut(s) 147, 308, 395, 1616, 2082
XhoI CTCGAG 1 cut(s) 1385
XmiI GTMKAC 1 cut(s) 814
XmnI GAANNNNTTC 2 cut(s) 1158, 2263
XspI CTAG 6 cut(s) 59, 311, 464, 564, 1428, 1914
ZrmI AGTACT 1 cut(s) 234
Zsp2I ATGCAT 1 cut(s) 1577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.