Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0002956

Physical Location & Seq

Genomic Coordinates Reverse (-)

33507110 .. 33515193

Gene Structure 8084 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g36700.t11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2931 bp

ATGCCTCCTGCATTAGTCTCACTGCAGCCATGGAATCGATTGAATCTTCAATCAGCCATGCAAGTTGAGCCAGGCATTTCATCAAACAGCACCCTTCCTTCTTCCCCCGCCACTCTCACACTTCCTCCGTCCGCCGCAGACGACCGGAGACCTACCTCCACCGACTCCGTTCTAACACAATTGCGACGCACCGTTTCTGCTCCACCATCTGATAAAAATATGGCATCGCCAGCTTGGTTACCGCAGGATGTGCAGCCATCTGTATCCCAAACCCCAGTTTCTGGTTCACCAGCGGGAGGTACTTCAACTCCAACTGCTGCTCCACTTGCTTCAAGTGCAGGCACACCGTCATTCCCTTACAGTGTGCCTCCAAATGCAAATAGTACTTTTGGAACCTTTCAGCAGCCTTCACCCAGTCCTGTGACTAAGTTCAATCTGTCAGCATCTCCAATGGCTCTTCAACCCCCGGTGCCTGGCTTGTCTTCTTCTGCCAGTCCCTCGTTTTCTTACAACATTCCACAATCTAATTATCCATTCCCTAATAATCAGCTGTTTCAATCTGGCATGCAGACTGTCTCACCTGCTATTGCACAAGAAACTGGGACTGTCTCATCCTCATCAACTACTGCTTCTACTTCTTCCAATTCCACAATGGCTCTATCATCAGCTCCTAATGTGGGGCCAACAACTTTGTGGGTTCCCACGACCCCATCATTTAACATGACTCATGGAATGCCTGGAACTCCTGGTCCCCCTGGAACAACCCACTCAGTGCAAATGTCCTTTAATCCAAATGCACGATCTGCTCCGGTCGATTCTTCTTCTATAGCATTTAGACCTAGCTTGCAAACACTTCCTATTGCATCATCTGCTGCCAACCCCCATGGAGTCTGGTTGCAGTCCCCACAGATGGAAGGCATACCTAGGTCACCATTTCAGCCACATCCTGCTGCTTTTCCTGGTCCGTTTTCTTTGCCTACACATGTTATGCCTCCCCCTTCTGGTATTGTTGACAGGAAACATGCCCATGAGGCAGGCAACCAACATATAGCTGCTTTCAATCAACACTTGGATGCTTGGACTGCCCACAAGACAGAGACAGGAGTTGTATACTATTATAATGCTGTGACTGGTGAATCAACTTATGACAAGCCTCCTGGATTTAAGGAGGAGCCGGAAAAGGTCTCTTTGCAGCCAGTTCCAGTTTCAACGGTGAATTTGTCGGGAACTGATTGGGTATTGGTTACAACAAGTGATGGGAAAAAGTTTTACCATAATAGCAAAACCAAGGTTAGTAGCTGGCAGATCCCAAATGAAGTGATAGAAATGAGAAAGAAGCAGGATGGTGATACACCAAAAGAACATCCAGTGTCAGTGCCAAATAATAGTCAAATGGTTGAAAAAGAATCTTCTCCAATTAGTTTAAATGCTCCGGCTATTAGCACCGGTGGTCGTGAGGCCATGGCTTACAAGGCATCAACCGTGCAAGGTTCAACATCTGCACTCGACCTGATCAAAAAGAAGTTGCAGGATTCTGGAGCTCCTGTTACTTCATCACCAGTTTCAGGACCTTCAGAATTAAATGGCTCAAGAGGAGTTGAAAGCACACCTAAGGTCCACCAGAGTGAGAATAGCAAGGATAAGCTACATGACACTAATGGGGATGGTAACATGTCTGACTCCTCATCAGATTCAGAGGATGCAGATAGCGGGCCAACAAAAGAGGAGGGTATTATTCAATTCAAGGAGATGCTCAAAGAACGGGGAGTGGCACCATTTTCAAAGTGGGAGAAGGAACTGCCAAAGATAGTGTTTGATCCACGATTTAAGGCAATTCCAAGTTATTCAAGGAGAGCCTTGTTTGAGCACTATGTTAAGACACGTGCAGAGGAGGAACGCAAGGAGAAACGAGCAGCTCAGAAGGCTGCAATAGAGGCATTTAAGCAGTTACTGGATGAAGCAGCAGAGGATATTGATGATGCCACTGATTACCACAGTTTCAGAAAGAAATGGGGCAATGATCCACGCTTTGAGAATTTGGATCGCAAGGATCGAGAGCATTTGTTGAATGAAAGAGTCCTTCCATTGAAGAAAGCTGCTGAAGAAAAGGCTGAAGCAGCACGTGCTGCTGCTGCAACTAGTTTTAGATGCATGCTTCAAGAAAAAGGAGATATTACAGTTAATTCCCGTTGGTCCAGGGTGAAAGATAGTTTGCGGAATGACCCAAGGTACAAATCTGTTAAACATGAGGATAGGGAAGTTTTATTCAACAAGTACTTATCAGATCTCAAAGCTGTGGAAGAGGAAGCAGAACGAGAGGCAAAAACTAAAAGGGATGAGCAGGATAAATTAAGGGAAAGAGAGCGAGAACTACGCAAGCGGAAGGAAAGAGAAGAACAAGAAACGGAGAGGGTGAAACTGAAAGTTCGCAGGAAAGAGGCAGTGTCATCTTTTCAAGCTTTACTTGTGGAAACAATCAAAGATCCTCAGGCATCTTGGACAGAAACTAAGCCTAAGTTGGAGAAGGACCCGCAAAGGCGTGCAGCCAACTCTGATCTAAGTTCATCTGATATGGAAAAACTCTTCCGGGAACACGTAAAGATGCTAAATGAGCGATGTACACATGAGTTTAGAGCTCTGCTGGCTGAAGTGTTGACTACAGAAGCAGCCTCCCAAGAGACAGAGGATGGAAAAACAGTGCTCAACTCATGGTCAACTGCTAAACGTGTACTAAAGTCTGATCCCAGATATAACAAGATGCCACGAAAAGATAGGGAAGTCGTGTGGCACCGATACGCCGAGGAGATGCTGCGTAAGCAAAAGTCATCACTTGATCCTAGGGAAGACAGGAAATCAGATGCTAAAAGCAGAAGCTCTGCCGATGCTGGAAGGGCCACCTCCGGATCAAGGGGTGCCCATGACCGTAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0001085 GO:0001103 GO:0003674 GO:0003712 GO:0003713 GO:0003714 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0070491 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03040 ko04212 map03040 map04212

Pfam Domains

Protein Families

FF WW

Protein Analysis

977

Amino Acids

107.45

Weight (kDa)

8.82

Isoelectric Point (pI)

60.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	358 - 384	4.2e-08	WW domain
WW_TCERG1	PF23517	399 - 441	3.1e-09	TCERG1 WW domain
WW	PF00397	409 - 436	1.3e-06	WW domain
FF	PF01846	579 - 623	2.7e-12	FF domain
FF	PF01846	642 - 690	1.5e-07	FF domain
FF	PF01846	712 - 758	4.3e-12	FF domain
FF	PF01846	812 - 864	4.7e-07	FF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002956)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19840
fragaria_vesca	FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700
malus_domestica	MD13G1007900.v1.1 MD13G1008000.v1.1 MD16G1000200.v1.1
prunus_persica	Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1
pyrus_communis	pycom13g00650 pycom16g00500 pycom16g00510 pycom16g00520
rosa_chinensis	RchiOBHm_Chr4g0446421
rosa_laevigata	RLG00000005662
rosa_multiflora	Rmu_co8175444.1_g000001 Rmu_sc0008360.1_g000005 Rmu_sc0018208.1_g000001 Rmu_sc0025430.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386860
rosa_rugosa	Rorug04G0371200
rosa_samantha	Rh4AG432800 Rh4BG441900 Rh4CG459300 Rh4DG440700
rosa_wichuraiana	Rw4G036970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1119
AarI	CACCTGC	1 cut(s)	589
Acc36I	ACCTGC	1 cut(s)	589
AccB1I	GGYRCC	4 cut(s)	469, 1771, 2787, 2912
AccB7I	CCANNNNNTGG	1 cut(s)	281
AccI	GTMKAC	1 cut(s)	1110
AccIII	TCCGGA	1 cut(s)	2900
AciI	CCGC	9 cut(s)	108, 132, 135, 242, 293, 1710, 2215, 2380, 2531
AclWI	GGATC	9 cut(s)	1300, 1811, 2015, 2049, 2058, 2477, 2735, 2828, 2911
AcsI	RAATTY	2 cut(s)	1216, 2035
AcuI	CTGAAG	4 cut(s)	1557, 2121, 2133, 2667
AcvI	CACGTG	2 cut(s)	1883, 2123
AdeI	CACNNNGTG	1 cut(s)	772
AfaI	GTAC	6 cut(s)	301, 385, 2231, 2276, 2620, 2730
AfiI	CCNNNNNNNGG	8 cut(s)	281, 296, 473, 677, 910, 1001, 1565, 2907
AflIII	ACRYGT	5 cut(s)	982, 1671, 1880, 2593, 2725
AgeI	ACCGGT	1 cut(s)	1445
AhlI	ACTAGT	1 cut(s)	2138
AjnI	CCWGG	8 cut(s)	70, 472, 736, 745, 754, 958, 1156, 2195
AleI	CACNNNNGTG	1 cut(s)	1623
AloI	GAACNNNNNNTCC	2 cut(s)	733, 765
Alw21I	GWGCWC	4 cut(s)	1543, 1869, 2638, 2703
Alw26I	GTCTC	7 cut(s)	22, 142, 580, 613, 1091, 1189, 2672
AlwI	GGATC	9 cut(s)	1300, 1811, 2015, 2049, 2058, 2477, 2735, 2828, 2911
AlwNI	CAGNNNCTG	2 cut(s)	281, 1951
Aor13HI	TCCGGA	1 cut(s)	2900
AoxI	GGCC	4 cut(s)	680, 1458, 1712, 2892
ApoI	RAATTY	2 cut(s)	1216, 2035
AsiGI	ACCGGT	1 cut(s)	1445
AspA2I	CCTAGG	2 cut(s)	923, 2837
AspS9I	GGNCC	9 cut(s)	680, 749, 962, 1568, 1615, 1712, 2193, 2527, 2892
AsuC2I	CCSGG	2 cut(s)	467, 2588
AvaII	GGWCC	6 cut(s)	749, 962, 1568, 1615, 2193, 2527
AvrII	CCTAGG	2 cut(s)	923, 2837
AxyI	CCTNAGG	2 cut(s)	1611, 2487
BaeGI	GKGCMC	1 cut(s)	2917
BanI	GGYRCC	4 cut(s)	469, 1771, 2787, 2912
BanII	GRGCYC	2 cut(s)	1543, 2638
BbrPI	CACGTG	2 cut(s)	1883, 2123
BbsI	GAAGAC	2 cut(s)	474, 2850
Bbv12I	GWGCWC	4 cut(s)	1543, 1869, 2638, 2703
BccI	CCATC	8 cut(s)	214, 265, 718, 904, 1250, 1337, 1658, 2681
BciT130I	CCWGG	8 cut(s)	72, 474, 738, 747, 756, 960, 1158, 2197
BciVI	GTATCC	1 cut(s)	274
BclI	TGATCA	1 cut(s)	1512
BcnI	CCSGG	2 cut(s)	467, 2588
BcoDI	GTCTC	7 cut(s)	22, 142, 580, 613, 1091, 1189, 2672
BcuI	ACTAGT	1 cut(s)	2138
BfaI	CTAG	4 cut(s)	840, 924, 2139, 2838
BfmI	CTRYAG	3 cut(s)	23, 825, 2658
BfuAI	ACCTGC	1 cut(s)	589
BfuI	GTATCC	1 cut(s)	274
BglI	GCCNNNNNGGC	1 cut(s)	1031
BglII	AGATCT	1 cut(s)	2284
BlnI	CCTAGG	2 cut(s)	923, 2837
BmcAI	AGTACT	2 cut(s)	385, 2276
Bme18I	GGWCC	6 cut(s)	749, 962, 1568, 1615, 2193, 2527
BmgT120I	GGNCC	9 cut(s)	680, 749, 962, 1568, 1615, 1712, 2193, 2527, 2892
BmrI	ACTGGG	3 cut(s)	269, 408, 609
BmuI	ACTGGG	3 cut(s)	269, 408, 609
BpiI	GAAGAC	2 cut(s)	474, 2850
BpmI	CTGGAG	1 cut(s)	1557
BpuEI	CTTGAG	1 cut(s)	1573
BpuMI	CCSGG	2 cut(s)	467, 2588
Bsa29I	ATCGAT	1 cut(s)	37
BsaAI	YACGTR	3 cut(s)	1883, 2123, 2596
BsaI	GGTCTC	2 cut(s)	142, 1189
BsaWI	WCCGGW	4 cut(s)	144, 808, 1445, 2900
BsaXI	ACNNNNNCTCC	8 cut(s)	109, 139, 292, 304, 322, 334, 1530, 1560
Bsc4I	CCNNNNNNNGG	8 cut(s)	281, 296, 473, 677, 910, 1001, 1565, 2907
Bse118I	RCCGGY	1 cut(s)	1445
Bse21I	CCTNAGG	2 cut(s)	1611, 2487
Bse3DI	GCAATG	1 cut(s)	2023
BseAI	TCCGGA	1 cut(s)	2900
BseBI	CCWGG	8 cut(s)	72, 474, 738, 747, 756, 960, 1158, 2197
BseCI	ATCGAT	1 cut(s)	37
BseLI	CCNNNNNNNGG	8 cut(s)	281, 296, 473, 677, 910, 1001, 1565, 2907
BseMI	GCAATG	1 cut(s)	2023
BseMII	CTCAG	3 cut(s)	783, 1931, 2501
BseRI	GAGGAG	6 cut(s)	1184, 1608, 1672, 1739, 1904, 2816
BseSI	GKGCMC	1 cut(s)	2917
BsgI	GTGCAG	5 cut(s)	272, 357, 1485, 1905, 2562
Bsh1285I	CGRYCG	2 cut(s)	145, 813
BshFI	GGCC	4 cut(s)	682, 1460, 1714, 2894
BshNI	GGYRCC	4 cut(s)	469, 1771, 2787, 2912
BshTI	ACCGGT	1 cut(s)	1445
BshVI	ATCGAT	1 cut(s)	37
BsiEI	CGRYCG	2 cut(s)	145, 813
BsiHKAI	GWGCWC	4 cut(s)	1543, 1869, 2638, 2703
BsiSI	CCGG	8 cut(s)	145, 467, 809, 1175, 1433, 1446, 2587, 2901
BslFI	GGGAC	4 cut(s)	480, 616, 735, 886
BslI	CCNNNNNNNGG	8 cut(s)	281, 296, 473, 677, 910, 1001, 1565, 2907
BsmAI	GTCTC	7 cut(s)	22, 142, 580, 613, 1091, 1189, 2672
BsmFI	GGGAC	4 cut(s)	480, 616, 735, 886
BsmI	GAATGC	1 cut(s)	738
BsnI	GGCC	4 cut(s)	682, 1460, 1714, 2894
Bso31I	GGTCTC	2 cut(s)	142, 1189
Bsp1286I	GDGCHC	5 cut(s)	1543, 1869, 2638, 2703, 2917
Bsp13I	TCCGGA	1 cut(s)	2900
Bsp1407I	TGTACA	1 cut(s)	2618
Bsp19I	CCATGG	3 cut(s)	29, 883, 1461
BspACI	CCGC	9 cut(s)	108, 132, 135, 242, 293, 1710, 2215, 2380, 2531
BspANI	GGCC	4 cut(s)	682, 1460, 1714, 2894
BspCNI	CTCAG	3 cut(s)	782, 1930, 2500
BspDI	ATCGAT	1 cut(s)	37
BspEI	TCCGGA	1 cut(s)	2900
BspMAI	CTGCAG	1 cut(s)	27
BspMI	ACCTGC	1 cut(s)	589
BspPI	GGATC	9 cut(s)	1300, 1811, 2015, 2049, 2058, 2477, 2735, 2828, 2911
BspQI	GCTCTTC	1 cut(s)	462
BspT107I	GGYRCC	4 cut(s)	469, 1771, 2787, 2912
BspTNI	GGTCTC	2 cut(s)	142, 1189
BsrDI	GCAATG	1 cut(s)	2023
BsrFI	RCCGGY	1 cut(s)	1445
BsrGI	TGTACA	1 cut(s)	2618
BssAI	RCCGGY	1 cut(s)	1445
BssNAI	GTATAC	1 cut(s)	1111
BssT1I	CCWWGG	7 cut(s)	29, 883, 923, 1287, 1461, 2225, 2837
Bst1107I	GTATAC	1 cut(s)	1111
Bst2UI	CCWGG	8 cut(s)	72, 474, 738, 747, 756, 960, 1158, 2197
Bst6I	CTCTTC	3 cut(s)	462, 2295, 2588
BstAPI	GCANNNNNTGC	5 cut(s)	250, 803, 869, 2123, 2126
BstAUI	TGTACA	1 cut(s)	2618
BstBAI	YACGTR	3 cut(s)	1883, 2123, 2596
BstDEI	CTNAG	8 cut(s)	426, 769, 1611, 1917, 2487, 2508, 2514, 2558
BstDSI	CCRYGG	3 cut(s)	29, 883, 1461
BstEII	GGTNACC	2 cut(s)	237, 927
BstMAI	GTCTC	7 cut(s)	22, 142, 580, 613, 1091, 1189, 2672
BstMCI	CGRYCG	2 cut(s)	145, 813
BstNI	CCWGG	8 cut(s)	72, 474, 738, 747, 756, 960, 1158, 2197
BstNSI	RCATGY	5 cut(s)	568, 986, 1025, 1675, 2155
BstPI	GGTNACC	2 cut(s)	237, 927
BstSFI	CTRYAG	3 cut(s)	23, 825, 2658
BstSLI	GKGCMC	1 cut(s)	2917
BstV2I	GAAGAC	2 cut(s)	474, 2850
BstX2I	RGATCY	3 cut(s)	1305, 2284, 2482
BstYI	RGATCY	3 cut(s)	1305, 2284, 2482
BstZ17I	GTATAC	1 cut(s)	1111
Bsu15I	ATCGAT	1 cut(s)	37
Bsu36I	CCTNAGG	2 cut(s)	1611, 2487
BsuI	GTATCC	1 cut(s)	274
BsuRI	GGCC	4 cut(s)	682, 1460, 1714, 2894
BsuTUI	ATCGAT	1 cut(s)	37
BtgI	CCRYGG	3 cut(s)	29, 883, 1461
BtgZI	GCGATG	2 cut(s)	210, 2629
BtsI	GCAGTG	2 cut(s)	20, 2448
BtsIMutI	CAGTG	8 cut(s)	20, 367, 777, 1374, 1380, 1983, 2448, 2703
BveI	ACCTGC	1 cut(s)	589
CaiI	CAGNNNCTG	2 cut(s)	281, 1951
Cfr10I	RCCGGY	1 cut(s)	1445
Cfr13I	GGNCC	9 cut(s)	680, 749, 962, 1568, 1615, 1712, 2193, 2527, 2892
ClaI	ATCGAT	1 cut(s)	37
CseI	GACGC	1 cut(s)	195
Csp6I	GTAC	6 cut(s)	300, 384, 2230, 2275, 2619, 2729
CspAI	ACCGGT	1 cut(s)	1445
CviQI	GTAC	6 cut(s)	300, 384, 2230, 2275, 2619, 2729
DdeI	CTNAG	8 cut(s)	426, 769, 1611, 1917, 2487, 2508, 2514, 2558
DraI	TTTAAA	1 cut(s)	1425
DraIII	CACNNNGTG	1 cut(s)	772
Eam1104I	CTCTTC	3 cut(s)	462, 2295, 2588
EarI	CTCTTC	3 cut(s)	462, 2295, 2588
EciI	GGCGGA	1 cut(s)	121
Ecl136II	GAGCTC	2 cut(s)	1541, 2636
Eco130I	CCWWGG	7 cut(s)	29, 883, 923, 1287, 1461, 2225, 2837
Eco24I	GRGCYC	2 cut(s)	1543, 2638
Eco31I	GGTCTC	2 cut(s)	142, 1189
Eco47I	GGWCC	6 cut(s)	749, 962, 1568, 1615, 2193, 2527
Eco53kI	GAGCTC	2 cut(s)	1541, 2636
Eco57I	CTGAAG	4 cut(s)	1557, 2121, 2133, 2667
Eco72I	CACGTG	2 cut(s)	1883, 2123
Eco81I	CCTNAGG	2 cut(s)	1611, 2487
Eco91I	GGTNACC	2 cut(s)	237, 927
EcoICRI	GAGCTC	2 cut(s)	1541, 2636
EcoO109I	RGGNCCY	2 cut(s)	1568, 2527
EcoO65I	GGTNACC	2 cut(s)	237, 927
EcoRII	CCWGG	8 cut(s)	70, 472, 736, 745, 754, 958, 1156, 2195
EcoT14I	CCWWGG	7 cut(s)	29, 883, 923, 1287, 1461, 2225, 2837
EcoT22I	ATGCAT	1 cut(s)	2153
EcoT38I	GRGCYC	2 cut(s)	1543, 2638
ErhI	CCWWGG	7 cut(s)	29, 883, 923, 1287, 1461, 2225, 2837
FalI	AAGNNNNNCTT	2 cut(s)	2448, 2480
FaqI	GGGAC	4 cut(s)	480, 616, 735, 886
FauI	CCCGC	4 cut(s)	115, 286, 1703, 2538
FbaI	TGATCA	1 cut(s)	1512
FblI	GTMKAC	1 cut(s)	1110
FriOI	GRGCYC	2 cut(s)	1543, 2638
FspBI	CTAG	4 cut(s)	840, 924, 2139, 2838
GsuI	CTGGAG	1 cut(s)	1557
HaeIII	GGCC	4 cut(s)	682, 1460, 1714, 2894
HapII	CCGG	8 cut(s)	145, 467, 809, 1175, 1433, 1446, 2587, 2901
HgaI	GACGC	1 cut(s)	195
HincII	GTYRAC	3 cut(s)	1012, 2655, 2715
HindII	GTYRAC	3 cut(s)	1012, 2655, 2715
HindIII	AAGCTT	1 cut(s)	2457
HpaII	CCGG	8 cut(s)	145, 467, 809, 1175, 1433, 1446, 2587, 2901
Hpy166II	GTNNAC	8 cut(s)	287, 1012, 1111, 1618, 2621, 2655, 2715, 2729
Hpy188III	TCNNGA	8 cut(s)	1224, 1454, 1536, 1566, 1590, 2054, 2159, 2901
Hpy8I	GTNNAC	8 cut(s)	287, 1012, 1111, 1618, 2621, 2655, 2715, 2729
Hpy99I	CGWCG	1 cut(s)	189
HpyCH4IV	ACGT	4 cut(s)	1882, 2122, 2595, 2725
HpyF3I	CTNAG	8 cut(s)	426, 769, 1611, 1917, 2487, 2508, 2514, 2558
HpySE526I	ACGT	4 cut(s)	1882, 2122, 2595, 2725
Kpn2I	TCCGGA	1 cut(s)	2900
Ksp22I	TGATCA	1 cut(s)	1512
LguI	GCTCTTC	1 cut(s)	462
LmnI	GCTCC	8 cut(s)	205, 325, 673, 811, 1171, 1435, 1538, 1546
MaeI	CTAG	4 cut(s)	840, 924, 2139, 2838
MaeII	ACGT	4 cut(s)	1882, 2122, 2595, 2725
MaeIII	GTNAC	8 cut(s)	237, 421, 927, 1126, 1243, 1546, 1667, 1947
MfeI	CAATTG	1 cut(s)	179
MflI	RGATCY	3 cut(s)	1305, 2284, 2482
MhlI	GDGCHC	5 cut(s)	1543, 1869, 2638, 2703, 2917
MlyI	GAGTC	5 cut(s)	158, 718, 897, 1673, 2085
MmeI	TCCRAC	2 cut(s)	335, 2499
Mph1103I	ATGCAT	1 cut(s)	2153
MroI	TCCGGA	1 cut(s)	2900
MslI	CAYNNNNRTG	3 cut(s)	1026, 1071, 1623
MspA1I	CMGCKG	2 cut(s)	293, 550
MspI	CCGG	8 cut(s)	145, 467, 809, 1175, 1433, 1446, 2587, 2901
MunI	CAATTG	1 cut(s)	179
Mva1269I	GAATGC	1 cut(s)	738
MvaI	CCWGG	8 cut(s)	72, 474, 738, 747, 756, 960, 1158, 2197
NciI	CCSGG	2 cut(s)	467, 2588
NcoI	CCATGG	3 cut(s)	29, 883, 1461
NmeAIII	GCCGAG	1 cut(s)	2824
NmuCI	GTSAC	3 cut(s)	421, 927, 1126
NsiI	ATGCAT	1 cut(s)	2153
NspI	RCATGY	5 cut(s)	568, 986, 1025, 1675, 2155
OliI	CACNNNNGTG	1 cut(s)	1623
PaeI	GCATGC	2 cut(s)	568, 2155
PaqCI	CACCTGC	1 cut(s)	589
PciI	ACATGT	2 cut(s)	982, 1671
PciSI	GCTCTTC	1 cut(s)	462
PcsI	WCGNNNNNNNCGW	1 cut(s)	2050
PctI	GAATGC	1 cut(s)	738
PfeI	GAWTC	7 cut(s)	34, 43, 815, 1136, 1406, 1532, 1691
PflMI	CCANNNNNTGG	1 cut(s)	281
PfoI	TCCNGGA	2 cut(s)	1156, 2586
PinAI	ACCGGT	1 cut(s)	1445
PleI	GAGTC	5 cut(s)	158, 718, 896, 1673, 2084
PmaCI	CACGTG	2 cut(s)	1883, 2123
PmlI	CACGTG	2 cut(s)	1883, 2123
PpsI	GAGTC	5 cut(s)	158, 718, 896, 1673, 2084
Ppu21I	YACGTR	3 cut(s)	1883, 2123, 2596
PpuMI	RGGWCCY	2 cut(s)	1568, 2527
PscI	ACATGT	2 cut(s)	982, 1671
PsiI	TTATAA	1 cut(s)	1119
Psp124BI	GAGCTC	2 cut(s)	1543, 2638
Psp5II	RGGWCCY	2 cut(s)	1568, 2527
Psp6I	CCWGG	8 cut(s)	70, 472, 736, 745, 754, 958, 1156, 2195
PspCI	CACGTG	2 cut(s)	1883, 2123
PspEI	GGTNACC	2 cut(s)	237, 927
PspGI	CCWGG	8 cut(s)	70, 472, 736, 745, 754, 958, 1156, 2195
PspPI	GGNCC	9 cut(s)	680, 749, 962, 1568, 1615, 1712, 2193, 2527, 2892
PspPPI	RGGWCCY	2 cut(s)	1568, 2527
PstI	CTGCAG	1 cut(s)	27
PstNI	CAGNNNCTG	2 cut(s)	281, 1951
PsuI	RGATCY	3 cut(s)	1305, 2284, 2482
PvuII	CAGCTG	1 cut(s)	550
RsaI	GTAC	6 cut(s)	301, 385, 2231, 2276, 2620, 2730
RsaNI	GTAC	6 cut(s)	300, 384, 2230, 2275, 2619, 2729
RseI	CAYNNNNRTG	3 cut(s)	1026, 1071, 1623
SacI	GAGCTC	2 cut(s)	1543, 2638
SapI	GCTCTTC	1 cut(s)	462
Sau96I	GGNCC	9 cut(s)	680, 749, 962, 1568, 1615, 1712, 2193, 2527, 2892
ScaI	AGTACT	2 cut(s)	385, 2276
SchI	GAGTC	5 cut(s)	158, 718, 897, 1673, 2085
SduI	GDGCHC	5 cut(s)	1543, 1869, 2638, 2703, 2917
SfcI	CTRYAG	3 cut(s)	23, 825, 2658
SgrAI	CRCCGGYG	1 cut(s)	1445
SinI	GGWCC	6 cut(s)	749, 962, 1568, 1615, 2193, 2527
SmiMI	CAYNNNNRTG	3 cut(s)	1026, 1071, 1623
SmlI	CTYRAG	1 cut(s)	1588
SmoI	CTYRAG	1 cut(s)	1588
SpeI	ACTAGT	1 cut(s)	2138
SphI	GCATGC	2 cut(s)	568, 2155
SsiI	CCGC	9 cut(s)	108, 132, 135, 242, 293, 1710, 2215, 2380, 2531
SspMI	CTAG	4 cut(s)	840, 924, 2139, 2838
SstI	GAGCTC	2 cut(s)	1543, 2638
StyI	CCWWGG	7 cut(s)	29, 883, 923, 1287, 1461, 2225, 2837
TaiI	ACGT	4 cut(s)	1885, 2125, 2598, 2728
TaqI	TCGA	4 cut(s)	37, 813, 1506, 2053
TatI	WGTACW	4 cut(s)	383, 2274, 2618, 2728
TauI	GCSGC	1 cut(s)	137
TfiI	GAWTC	7 cut(s)	34, 43, 815, 1136, 1406, 1532, 1691
TscAI	CASTG	8 cut(s)	27, 367, 777, 1374, 1380, 1990, 2448, 2703
TseFI	GTSAC	3 cut(s)	421, 927, 1126
Tsp45I	GTSAC	3 cut(s)	421, 927, 1126
TspDTI	ATGAA	6 cut(s)	69, 1329, 1542, 1971, 2085, 2553
TspGWI	ACGGA	4 cut(s)	117, 157, 954, 2420
TspRI	CASTG	8 cut(s)	27, 367, 777, 1374, 1380, 1990, 2448, 2703
Van91I	CCANNNNNTGG	1 cut(s)	281
VpaK11BI	GGWCC	6 cut(s)	749, 962, 1568, 1615, 2193, 2527
XapI	RAATTY	2 cut(s)	1216, 2035
XceI	RCATGY	5 cut(s)	568, 986, 1025, 1675, 2155
XcmI	CCANNNNNNNNNTGG	3 cut(s)	649, 690, 1782
XmaJI	CCTAGG	2 cut(s)	923, 2837
XmiI	GTMKAC	1 cut(s)	1110
XspI	CTAG	4 cut(s)	840, 924, 2139, 2838
ZrmI	AGTACT	2 cut(s)	385, 2276
Zsp2I	ATGCAT	1 cut(s)	2153

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.