Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002956

Physical Location & Seq

Genomic Coordinates Forward (+)

676316 .. 685499

Gene Structure 9184 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005662

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3045 bp

ATGGGCCTGGGTTTAACAATTCGGGCACTTTACTACCCTTACGTCGGAGACCTACCTCCACTGATATCAATCAAACACAATTTCCTCCTCTCTATTCTACGAAGCCCCGTTTCGGCTCCACCATCTGATCAAACAATGGCATCGCCAGCTTGGTTACCGCAGGATGTGCAGCCATCTGTATCTCAAGCCCCAATTTCTGGTTCACCAGCAGGGGCTCCTTCAACTCCGACTGCAGCTCCACTTGCTTCAAGTGCGGGCACACCGTCATTCTCGTACAGTGTGCCTCCAAATGCAAATATCACTTTTGGAACCTCTCAGCAGCCATCAACTGGTCCTGGGACTAAGTTTAATCTCTCAGCATCTCCAATGGTTATTCAACCCCCAGTTCCTGGCTTGTCATCTGCTGCCAGTCCCTCTTTCTCATACAACATTCCAAAATCTAATTATCCCTTCCCTAATAATCAGCTGTTTCAATCTGTCATGCAGAATGTCTCACCTGCTATTGCACAAGAAACTGGGAATGCCTCATTGTCATCAACTAGCTCTCATTCTGGTTACTTGGCTGCTTCTACTTCTTCAAGTTCCACAATAGCTCTATCATCAGCTCCTAATGTGGGACCAACAACTTCCTGGGTTCCCACGACCCCATCATTTAATATGACTCATGGAATGCCTGGAACTCCTGGTCCCCCTGGAACAGTCCACTCACTGCAAATGTCCTTTAATCTGACTGCACGATCTGCACCTGTTGATTCTTCTTCTATAGCCCTTAGACCTAGCTTGCAAACACCTTCGGCTGGATCATCTGCAGTTCAGCCACAAGCAGGTGCTCCCTACCCATCTTTACCTGCTATGGCTGCTAACCCCCACGGCGTCTGGTTGCAGTCCCCACAGATGGAAGGCGTACCTAGGTCACCATTTCAGGTGTATCCTGCTGCTTTTCCCGGTCCCTTTCCTTTGCCTACACGTGTTATGCCTCCCCCTTCTGTTCTTATACCTGATTCTCAGCCTCCTGGTGTCACTCCTGTGGGAAATACAGTAGCAACATCCTTGTCTTCCAGTTCTGGTCATCAACTTGCACCTTCTTCATGGATGCAGACAGAATTACCTCATCCTGGTATTGATGACAGGAAACATGCCCTTGAGGCAGGCAACCAACATATAGCTGCTGTCAATCAACAATTGGATGCTTGGACTGCCCACAAGACAGAGACAGGAGTTGTATACTATTATAATGCTGTGACTGGTGAATCAACTTATGAGAAGCCTCCTGGCTTTAAGGAGGAGCCTGATAAGGTCTCTGTGCAGCCAGTTCCAGTTTCAACGGTGAATTTGTCCGGAACTGATTGGGTATTGGTTACAACGAGTGATGGGAAAAAGTTTTACCATAATAGCAAAACCAAGGTTAGCAGCTGGCAGATCCCAAATGAAGTGATAGAAATGAGAAAGAAGCAGGATGGTGACACGCCAAAAGAACATCCAGAGTCAGTGCCAAATAATAGTCAAATGGTTGAAAAGGAATCTGCTCCAACCAGTTTGACTGCTCCGGCCATTAGCACGGGTGGTCGTGAAGCCATGGCTTACAAGGCCTCAACTGTGCAGGGATCATCTTCTGCACTCGACCTGATTAAAAAGAAGTTGCAGGATTCTGGAGCTCCTGTTACTTCATCACCAGTTTCAGGACCTTCAGAGTTAAATGGCTCAAGAGGAGTTGAGGGTACACCTAAGGTCCAGCAGAGTGAGAATAGCAAGGATAAGCTAAATGACACTAATGGGGATGGTAACATGTCTGACTCCTCATCAGATTCAGAGGATGCAGATAGTGGGCCAACAAAAGAGGAGGGTATTATTCAATTCAAGGAGATGCTCAAAGAACGGGGAGTGGCACCATTTTCAAAGTGGGAGAAGGAACTGCCAAAGATAGTGTTTGATCCACGATTTAAGGCCATTCCAAGTTATTCAAGGAGAGCCTTGTTTGAGCACTATGTTAAGACACGTGCAGAGGAGGAACGCAAGGAGAAACGAGCAGCTCAGAAGGCTGCAATAGAGGCATTTAAGCAGTTACTTGATGAAGCAGTGGAGGATATTGATGATACCACTGATTACCACAGTTTCAGAAAGAAATGGGGCAATGATCCACGCTTTGAGAATTTGGACCGCAAGGATCGAGAACATTTGTTGAATGAAAGAGTCCTTCCATTGAAGAAGGCTGCTGAAGAAAAGGCTGAAGCAGTGCGTGCAGCTGCTTCAACTAGTTTTAAGTGCATGCTTCAAGAAAAAGGAGATATTACAGTTAATTCCCGTTGGTCCAGGGTGAAAGATAGTCTGCGGAATGACCCAAGGTACAAATCTGTTAAGCATGAGGATAGGGAAGTTTTATTCAACAAGTACATATCAGATCTCAAAGCTGTGGAAGAGGAAGCAGAACGAGAGGCAAAAGCTAAAAGGGATGAGCAGGATAAGTTAAAGGAAAGAGAGCGAGAACTACGCAAGCGGAAGGAAAGAGAAGAACAAGAAACAGAGAGGGTGCGATTGAAAGTTCGCAGGAAGGAGGCAGTGTCTTCTTTTCAAGCTCTACTTGTGGAAACAATTAAAGATCCTCAGGCATCTTGGACAGAATCTAAGCCCAAGTTGGAGAAGGACCCGCAAAGGCGTGCAGCCAACCCTGATCTAAATTCATCTGACATGGAAAAGCTCTTCCGCGACCACATAAAGATGCTGCATGAGCGATGTGCACACGAGTTTAGAGCCCTGTTGGCTGAGGTGTTGACTATAGAAGCAGCCTCCCAAGAGACAGAGGATGGAAAAACAGTTCTTAACTCATGGTCAACAGCTAAACGTTTTCTAAAGTCTGATCCCAGATATAACAAGATGCCACGAAAAGATAGGGAAGTCGTGTGGCACCGATATGCCGAGGAGATGCAGCGGAAGCAAAAGTCATCACTTGATCATAGGGAAGACAGGAAATCAGATGCTAAAAGCAGAAGCTCTGCCGATGCTGGAAGGACCACCTTTGGATCAAGGGGTGCCCATGACCGTAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0001085 GO:0001103 GO:0003674 GO:0003712 GO:0003713 GO:0003714 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0070491 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03040 ko04212 map03040 map04212

Pfam Domains

Protein Families

FF WW

Protein Analysis

1015

Amino Acids

111.21

Weight (kDa)

8.59

Isoelectric Point (pI)

56.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	397 - 423	2.2e-08	WW domain
WW_TCERG1	PF23517	438 - 480	3.2e-09	TCERG1 WW domain
WW	PF00397	448 - 475	1.4e-06	WW domain
FF	PF01846	618 - 662	2.8e-12	FF domain
FF	PF01846	681 - 729	1.2e-08	FF domain
FF	PF01846	749 - 797	2.1e-12	FF domain
FF	PF01846	851 - 903	1.6e-06	FF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002956)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19840
fragaria_vesca	FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700
malus_domestica	MD13G1007900.v1.1 MD13G1008000.v1.1 MD16G1000200.v1.1
prunus_persica	Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1
pyrus_communis	pycom13g00650 pycom16g00500 pycom16g00510 pycom16g00520
rosa_chinensis	RchiOBHm_Chr4g0446421
rosa_laevigata	RLG00000005662
rosa_multiflora	Rmu_co8175444.1_g000001 Rmu_sc0008360.1_g000005 Rmu_sc0018208.1_g000001 Rmu_sc0025430.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386860
rosa_rugosa	Rorug04G0371200
rosa_samantha	Rh4AG432800 Rh4BG441900 Rh4CG459300 Rh4DG440700
rosa_wichuraiana	Rw4G036970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1233
AarI	CACCTGC	2 cut(s)	505, 815
Acc36I	ACCTGC	3 cut(s)	505, 815, 856
AccB1I	GGYRCC	3 cut(s)	1885, 2901, 3026
AccB7I	CCANNNNNTGG	3 cut(s)	197, 329, 389
AccI	GTMKAC	1 cut(s)	1224
AccII	CGCG	1 cut(s)	2703
AccIII	TCCGGA	1 cut(s)	1337
AciI	CCGC	8 cut(s)	158, 254, 2158, 2329, 2494, 2645, 2701, 2926
AclI	AACGTT	1 cut(s)	2839
AclWI	GGATC	9 cut(s)	808, 1414, 1612, 1925, 2129, 2172, 2591, 2849, 3025
AcoI	YGGCCR	1 cut(s)	1548
AcsI	RAATTY	3 cut(s)	1330, 2149, 2674
AcuI	CTGAAG	3 cut(s)	1671, 2235, 2247
AcvI	CACGTG	2 cut(s)	968, 1997
AcyI	GRCGYC	1 cut(s)	873
AfaI	GTAC	5 cut(s)	275, 906, 1720, 2345, 2390
AflIII	ACRYGT	4 cut(s)	965, 967, 1785, 1994
AhlI	ACTAGT	1 cut(s)	2252
AjuI	GAANNNNNNNTTGG	2 cut(s)	184, 216
AleI	CACNNNNGTG	1 cut(s)	1025
AloI	GAACNNNNNNTCC	4 cut(s)	670, 702, 2796, 2828
Alw21I	GWGCWC	4 cut(s)	832, 1657, 1983, 2737
Alw26I	GTCTC	5 cut(s)	42, 496, 1205, 1303, 2786
Alw44I	GTGCAC	1 cut(s)	2733
AlwI	GGATC	9 cut(s)	808, 1414, 1612, 1925, 2129, 2172, 2591, 2849, 3025
AlwNI	CAGNNNCTG	1 cut(s)	389
Aor13HI	TCCGGA	1 cut(s)	1337
AoxI	GGCC	5 cut(s)	4, 1548, 1587, 1826, 1944
ApaLI	GTGCAC	1 cut(s)	2733
ApoI	RAATTY	3 cut(s)	1330, 2149, 2674
AspA2I	CCTAGG	1 cut(s)	908
AsuC2I	CCSGG	1 cut(s)	945
AsuHPI	GGTGA	8 cut(s)	195, 486, 906, 1259, 1339, 1472, 1662, 2326
AvrII	CCTAGG	1 cut(s)	908
AxyI	CCTNAGG	2 cut(s)	1725, 2601
BaeGI	GKGCMC	4 cut(s)	28, 260, 2737, 3031
BanI	GGYRCC	3 cut(s)	1885, 2901, 3026
BanII	GRGCYC	3 cut(s)	217, 1657, 2752
BauI	CACGAG	1 cut(s)	2738
BbrPI	CACGTG	2 cut(s)	968, 1997
BbsI	GAAGAC	3 cut(s)	1047, 2553, 2964
Bbv12I	GWGCWC	4 cut(s)	832, 1657, 1983, 2737
BbvCI	CCTCAGC	1 cut(s)	2760
BceAI	ACGGC	1 cut(s)	886
BciVI	GTATCC	1 cut(s)	939
BclI	TGATCA	2 cut(s)	127, 2947
BcnI	CCSGG	1 cut(s)	945
BcoDI	GTCTC	5 cut(s)	42, 496, 1205, 1303, 2786
BcuI	ACTAGT	1 cut(s)	2252
BfaI	CTAG	4 cut(s)	540, 777, 909, 2253
BfmI	CTRYAG	4 cut(s)	231, 762, 807, 2772
BfuAI	ACCTGC	3 cut(s)	505, 815, 856
BfuI	GTATCC	1 cut(s)	939
BglI	GCCNNNNNGGC	2 cut(s)	1145, 2756
BglII	AGATCT	1 cut(s)	2398
BlnI	CCTAGG	1 cut(s)	908
BmrI	ACTGGG	2 cut(s)	377, 525
BmuI	ACTGGG	2 cut(s)	377, 525
BpiI	GAAGAC	3 cut(s)	1047, 2553, 2964
BpmI	CTGGAG	1 cut(s)	1671
Bpu10I	CCTNAGC	1 cut(s)	2760
BpuEI	CTTGAG	3 cut(s)	168, 1163, 1687
BpuMI	CCSGG	1 cut(s)	945
BsaAI	YACGTR	2 cut(s)	968, 1997
BsaBI	GATNNNNATC	1 cut(s)	68
BsaHI	GRCGYC	1 cut(s)	873
BsaI	GGTCTC	2 cut(s)	42, 1303
BsaWI	WCCGGW	1 cut(s)	1337
BsaXI	ACNNNNNCTCC	6 cut(s)	220, 250, 1644, 1674, 2543, 2573
Bse21I	CCTNAGG	2 cut(s)	1725, 2601
Bse3DI	GCAATG	1 cut(s)	2137
Bse8I	GATNNNNATC	1 cut(s)	68
BseAI	TCCGGA	1 cut(s)	1337
BseJI	GATNNNNATC	1 cut(s)	68
BseMI	GCAATG	1 cut(s)	2137
BseMII	CTCAG	6 cut(s)	329, 369, 1019, 2045, 2615, 2751
BseRI	GAGGAG	7 cut(s)	77, 1298, 1722, 1786, 1853, 2018, 2930
BseSI	GKGCMC	4 cut(s)	28, 260, 2737, 3031
BsgI	GTGCAG	9 cut(s)	188, 717, 726, 1325, 1599, 1619, 2019, 2259, 2676
Bsh1236I	CGCG	1 cut(s)	2703
BshFI	GGCC	5 cut(s)	6, 1550, 1589, 1828, 1946
BshNI	GGYRCC	3 cut(s)	1885, 2901, 3026
BsiHKAI	GWGCWC	4 cut(s)	832, 1657, 1983, 2737
BsiSI	CCGG	3 cut(s)	945, 1338, 1547
BslFI	GGGAC	6 cut(s)	352, 396, 630, 672, 871, 933
BsmAI	GTCTC	5 cut(s)	42, 496, 1205, 1303, 2786
BsmFI	GGGAC	6 cut(s)	352, 396, 630, 672, 871, 933
BsmI	GAATGC	2 cut(s)	526, 675
BsnI	GGCC	5 cut(s)	6, 1550, 1589, 1828, 1946
Bso31I	GGTCTC	2 cut(s)	42, 1303
Bsp1286I	GDGCHC	9 cut(s)	28, 217, 260, 832, 1657, 1983, 2737, 2752, 3031
Bsp13I	TCCGGA	1 cut(s)	1337
Bsp19I	CCATGG	1 cut(s)	1575
BspACI	CCGC	8 cut(s)	158, 254, 2158, 2329, 2494, 2645, 2701, 2926
BspANI	GGCC	5 cut(s)	6, 1550, 1589, 1828, 1946
BspCNI	CTCAG	6 cut(s)	328, 368, 1018, 2044, 2614, 2752
BspEI	TCCGGA	1 cut(s)	1337
BspFNI	CGCG	1 cut(s)	2703
BspMAI	CTGCAG	2 cut(s)	235, 811
BspMI	ACCTGC	3 cut(s)	505, 815, 856
BspPI	GGATC	9 cut(s)	808, 1414, 1612, 1925, 2129, 2172, 2591, 2849, 3025
BspQI	GCTCTTC	1 cut(s)	2702
BspT107I	GGYRCC	3 cut(s)	1885, 2901, 3026
BspTNI	GGTCTC	2 cut(s)	42, 1303
BsrDI	GCAATG	1 cut(s)	2137
BssNAI	GTATAC	1 cut(s)	1225
BssNI	GRCGYC	1 cut(s)	873
BssSI	CACGAG	1 cut(s)	2738
BssT1I	CCWWGG	4 cut(s)	908, 1401, 1575, 2339
Bst1107I	GTATAC	1 cut(s)	1225
Bst2BI	CACGAG	1 cut(s)	2738
Bst6I	CTCTTC	2 cut(s)	2409, 2702
BstACI	GRCGYC	1 cut(s)	873
BstAPI	GCANNNNNTGC	3 cut(s)	166, 740, 2237
BstBAI	YACGTR	2 cut(s)	968, 1997
BstC8I	GCNNGC	9 cut(s)	147, 256, 782, 1150, 1415, 2238, 2267, 2492, 2655
BstDSI	CCRYGG	2 cut(s)	868, 1575
BstEII	GGTNACC	2 cut(s)	153, 912
BstFNI	CGCG	1 cut(s)	2703
BstMAI	GTCTC	5 cut(s)	42, 496, 1205, 1303, 2786
BstNSI	RCATGY	3 cut(s)	1139, 1789, 2269
BstPI	GGTNACC	2 cut(s)	153, 912
BstSFI	CTRYAG	4 cut(s)	231, 762, 807, 2772
BstSLI	GKGCMC	4 cut(s)	28, 260, 2737, 3031
BstUI	CGCG	1 cut(s)	2703
BstV2I	GAAGAC	3 cut(s)	1047, 2553, 2964
BstX2I	RGATCY	3 cut(s)	1419, 2398, 2596
BstYI	RGATCY	3 cut(s)	1419, 2398, 2596
BstZ17I	GTATAC	1 cut(s)	1225
Bsu36I	CCTNAGG	2 cut(s)	1725, 2601
BsuI	GTATCC	1 cut(s)	939
BsuRI	GGCC	5 cut(s)	6, 1550, 1589, 1828, 1946
BtgI	CCRYGG	2 cut(s)	868, 1575
BtgZI	GCGATG	2 cut(s)	126, 2743
BtsI	GCAGTG	4 cut(s)	707, 2082, 2238, 2562
BtsIMutI	CAGTG	8 cut(s)	59, 283, 707, 1494, 2082, 2097, 2238, 2562
BveI	ACCTGC	3 cut(s)	505, 815, 856
Cac8I	GCNNGC	9 cut(s)	147, 256, 782, 1150, 1415, 2238, 2267, 2492, 2655
CaiI	CAGNNNCTG	1 cut(s)	389
CseI	GACGC	1 cut(s)	862
Csp6I	GTAC	5 cut(s)	274, 905, 1719, 2344, 2389
CviQI	GTAC	5 cut(s)	274, 905, 1719, 2344, 2389
EaeI	YGGCCR	1 cut(s)	1548
Eam1104I	CTCTTC	2 cut(s)	2409, 2702
EarI	CTCTTC	2 cut(s)	2409, 2702
Ecl136II	GAGCTC	1 cut(s)	1655
Eco130I	CCWWGG	4 cut(s)	908, 1401, 1575, 2339
Eco147I	AGGCCT	1 cut(s)	1589
Eco24I	GRGCYC	3 cut(s)	217, 1657, 2752
Eco31I	GGTCTC	2 cut(s)	42, 1303
Eco32I	GATATC	1 cut(s)	66
Eco53kI	GAGCTC	1 cut(s)	1655
Eco57I	CTGAAG	3 cut(s)	1671, 2235, 2247
Eco72I	CACGTG	2 cut(s)	968, 1997
Eco81I	CCTNAGG	2 cut(s)	1725, 2601
Eco91I	GGTNACC	2 cut(s)	153, 912
EcoICRI	GAGCTC	1 cut(s)	1655
EcoO109I	RGGNCCY	2 cut(s)	1682, 2641
EcoO65I	GGTNACC	2 cut(s)	153, 912
EcoRV	GATATC	1 cut(s)	66
EcoT14I	CCWWGG	4 cut(s)	908, 1401, 1575, 2339
EcoT38I	GRGCYC	3 cut(s)	217, 1657, 2752
ErhI	CCWWGG	4 cut(s)	908, 1401, 1575, 2339
FalI	AAGNNNNNCTT	2 cut(s)	2562, 2594
FaqI	GGGAC	6 cut(s)	352, 396, 630, 672, 871, 933
FauI	CCCGC	2 cut(s)	247, 2652
FbaI	TGATCA	2 cut(s)	127, 2947
FblI	GTMKAC	1 cut(s)	1224
FriOI	GRGCYC	3 cut(s)	217, 1657, 2752
FspBI	CTAG	4 cut(s)	540, 777, 909, 2253
GsuI	CTGGAG	1 cut(s)	1671
HaeIII	GGCC	5 cut(s)	6, 1550, 1589, 1828, 1946
HapII	CCGG	3 cut(s)	945, 1338, 1547
HgaI	GACGC	1 cut(s)	862
Hin1I	GRCGYC	1 cut(s)	873
HincII	GTYRAC	2 cut(s)	2769, 2829
HindII	GTYRAC	2 cut(s)	2769, 2829
HpaII	CCGG	3 cut(s)	945, 1338, 1547
HphI	GGTGA	8 cut(s)	195, 486, 906, 1259, 1339, 1472, 1662, 2326
Hpy166II	GTNNAC	7 cut(s)	203, 703, 1225, 1721, 2735, 2769, 2829
Hpy188III	TCNNGA	8 cut(s)	1338, 1481, 1568, 1650, 1680, 1704, 2168, 2273
Hpy8I	GTNNAC	7 cut(s)	203, 703, 1225, 1721, 2735, 2769, 2829
Hpy99I	CGWCG	1 cut(s)	47
HpyCH4IV	ACGT	4 cut(s)	42, 967, 1996, 2839
HpySE526I	ACGT	4 cut(s)	42, 967, 1996, 2839
Hsp92I	GRCGYC	1 cut(s)	873
Kpn2I	TCCGGA	1 cut(s)	1337
Ksp22I	TGATCA	2 cut(s)	127, 2947
LguI	GCTCTTC	1 cut(s)	2702
MaeI	CTAG	4 cut(s)	540, 777, 909, 2253
MaeII	ACGT	4 cut(s)	42, 967, 1996, 2839
MfeI	CAATTG	1 cut(s)	1181
MflI	RGATCY	3 cut(s)	1419, 2398, 2596
MhlI	GDGCHC	9 cut(s)	28, 217, 260, 832, 1657, 1983, 2737, 2752, 3031
MlyI	GAGTC	4 cut(s)	655, 1493, 1787, 2199
MmeI	TCCRAC	4 cut(s)	25, 251, 1553, 2613
MroI	TCCGGA	1 cut(s)	1337
MslI	CAYNNNNRTG	3 cut(s)	1025, 2714, 2907
MspA1I	CMGCKG	4 cut(s)	466, 1413, 2243, 2926
MspI	CCGG	3 cut(s)	945, 1338, 1547
MunI	CAATTG	1 cut(s)	1181
Mva1269I	GAATGC	2 cut(s)	526, 675
MvnI	CGCG	1 cut(s)	2703
NciI	CCSGG	1 cut(s)	945
NcoI	CCATGG	1 cut(s)	1575
NmeAIII	GCCGAG	1 cut(s)	2938
NmuCI	GTSAC	4 cut(s)	912, 1018, 1240, 1460
NspI	RCATGY	3 cut(s)	1139, 1789, 2269
OliI	CACNNNNGTG	1 cut(s)	1025
PaeI	GCATGC	1 cut(s)	2269
PaqCI	CACCTGC	2 cut(s)	505, 815
PceI	AGGCCT	1 cut(s)	1589
PciI	ACATGT	1 cut(s)	1785
PciSI	GCTCTTC	1 cut(s)	2702
PctI	GAATGC	2 cut(s)	526, 675
PfeI	GAWTC	7 cut(s)	752, 1001, 1250, 1520, 1646, 1805, 2618
PflMI	CCANNNNNTGG	3 cut(s)	197, 329, 389
PleI	GAGTC	4 cut(s)	655, 1492, 1787, 2198
PmaCI	CACGTG	2 cut(s)	968, 1997
PmlI	CACGTG	2 cut(s)	968, 1997
PpsI	GAGTC	4 cut(s)	655, 1492, 1787, 2198
Ppu21I	YACGTR	2 cut(s)	968, 1997
PpuMI	RGGWCCY	2 cut(s)	1682, 2641
PscI	ACATGT	1 cut(s)	1785
PsiI	TTATAA	1 cut(s)	1233
Psp124BI	GAGCTC	1 cut(s)	1657
Psp1406I	AACGTT	1 cut(s)	2839
Psp5II	RGGWCCY	2 cut(s)	1682, 2641
PspCI	CACGTG	2 cut(s)	968, 1997
PspEI	GGTNACC	2 cut(s)	153, 912
PspPPI	RGGWCCY	2 cut(s)	1682, 2641
PstI	CTGCAG	2 cut(s)	235, 811
PstNI	CAGNNNCTG	1 cut(s)	389
PsuI	RGATCY	3 cut(s)	1419, 2398, 2596
PvuII	CAGCTG	3 cut(s)	466, 1413, 2243
RsaI	GTAC	5 cut(s)	275, 906, 1720, 2345, 2390
RsaNI	GTAC	5 cut(s)	274, 905, 1719, 2344, 2389
RseI	CAYNNNNRTG	3 cut(s)	1025, 2714, 2907
SacI	GAGCTC	1 cut(s)	1657
SapI	GCTCTTC	1 cut(s)	2702
SchI	GAGTC	4 cut(s)	655, 1493, 1787, 2199
SduI	GDGCHC	9 cut(s)	28, 217, 260, 832, 1657, 1983, 2737, 2752, 3031
SfcI	CTRYAG	4 cut(s)	231, 762, 807, 2772
SmiMI	CAYNNNNRTG	3 cut(s)	1025, 2714, 2907
SmlI	CTYRAG	3 cut(s)	183, 1142, 1702
SmoI	CTYRAG	3 cut(s)	183, 1142, 1702
SpeI	ACTAGT	1 cut(s)	2252
SphI	GCATGC	1 cut(s)	2269
SseBI	AGGCCT	1 cut(s)	1589
SsiI	CCGC	8 cut(s)	158, 254, 2158, 2329, 2494, 2645, 2701, 2926
SspMI	CTAG	4 cut(s)	540, 777, 909, 2253
SstI	GAGCTC	1 cut(s)	1657
StuI	AGGCCT	1 cut(s)	1589
StyI	CCWWGG	4 cut(s)	908, 1401, 1575, 2339
TaiI	ACGT	4 cut(s)	45, 970, 1999, 2842
TaqI	TCGA	2 cut(s)	1620, 2167
TatI	WGTACW	1 cut(s)	2388
TfiI	GAWTC	7 cut(s)	752, 1001, 1250, 1520, 1646, 1805, 2618
TscAI	CASTG	8 cut(s)	66, 283, 714, 1494, 2082, 2104, 2238, 2562
TseFI	GTSAC	4 cut(s)	912, 1018, 1240, 1460
Tsp45I	GTSAC	4 cut(s)	912, 1018, 1240, 1460
TspDTI	ATGAA	6 cut(s)	1077, 1443, 1656, 2085, 2199, 2667
TspRI	CASTG	8 cut(s)	66, 283, 714, 1494, 2082, 2104, 2238, 2562
Van91I	CCANNNNNTGG	3 cut(s)	197, 329, 389
VneI	GTGCAC	1 cut(s)	2733
XapI	RAATTY	3 cut(s)	1330, 2149, 2674
XceI	RCATGY	3 cut(s)	1139, 1789, 2269
XcmI	CCANNNNNNNNNTGG	2 cut(s)	627, 1896
XmaJI	CCTAGG	1 cut(s)	908
XmiI	GTMKAC	1 cut(s)	1224
XspI	CTAG	4 cut(s)	540, 777, 909, 2253

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.