Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008360.1

Orthogroup ID

OG0002956

Physical Location & Seq

Genomic Coordinates Reverse (-)

25144 .. 39286

Gene Structure 14143 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008360.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4338 bp

atgggcttgggaattgttaacagtgtggccaaccctaaacaaacagagtcttccgtcggagacctacctccactgatatcaatcaagcacaatttcctcctctctattctacgacgccccgtttcttctccaccatctgatcaaataatggcatcgccagcttggttaccgcaggatgtgcagccatctgtatctcaagcccccgtttctggttcaccagcaggggctccttcaactccggctgcagctccacttgcttcaagtgcgggcacaccgtcattctcatacagtgtgcctccaaatgcaaatatcacttttggaacctctcagcagccatcaactagtcctgggactaagtttaatctctcagcatctccaatggttattcaacccccagttcctggcttgtcatctgctgccagtccctctttctcatacaacattccaaaatctaattatcccttccctaataatcagctgtttcaatctggcacgaatgtctcacctgctattgcacaagaaactgggaatgcctcattgtcatcaactagctctcattctggttacttggctgcttctacttcttcaagttccacaatggctctatcatcagctcctaatgtgggaccaacaacttcatgggttcccacgaccccatcatttaatatgactcatggaatgcctggaactcctggtccccctggaacagcccactcactgcaaatgtcctttaatctgactgcacgatctgcacctgttgattcttcttctatagcccttagacctagcttgcaaacaccttctgctggatcatctgcagttcagccacaagcaggtgctccctacccatctttacctgctgtggctgctaatccccacggagtctggttgcagtccccacagatggaaggcatacctaggtcaccatttcaggcatatcctgctgcttttcccggtccctttcctttgcctacacgtgttatgcctcccccttctgttcttatacctgattctcagcctcctggtgtcactcctgtgggaaatacggtagcaacatccttgtcttccagttctggtcatcaacttgcaccttcttcatggatgcagacagaattacctcatcctggtattgatgacaggaaacatgcccttgaggcaggcaaccaacatatagctgctgtcaatcaacaattggatgcttggactgcccacaagacagagacaggagttgtatactattataatgctgtgactggtgaatcaacttatgagaagcctcctggatttaaggaggagcctgataaggtctctgtgcagccagttccagtttcaacggtgaatttgtccggaactgattgggtattggttacaacgagtgatgggaaaaagttttaccataatagcaaaaccaaggttagcagctggcagatcccaaatgaagtgatagaaatgagaaagaagcaggatggtgacacgccaaaagaacatccagagtcagtgccaaataatagtcaaatggttgaaaaggaatctgctccaatcagtttgagtgctccggccattagcacaggtggtcgtgaagccatggcttacaaggcctcaactgtgcagggatcatcatctgcactcgacctgattaaaaagaagttgcaggattctggagctcctgttacttcatcaccagtttcaggaccttcagagttaaatggctcaagaggagttgagagtacacctaaggtccagcagagtgagaatagcaaggataagctaaatgacactaatggggatggtaacatgtctgactcctcatcagattcagaggacgcagatagtgggccaacaaaagaggagggtattattcaattcaaggagatgctcaaagaacggggagtggcaccattttcaaagtgggagaaggaactgccaaagatagtgtttgatccacgatttaaggccattccaagttattcaaggagagccttgtttgagcactatgttaagacacgtgcagaggaggaacgcaaggagaaacgagcagctcagaaggctgcattagaggcatttaagcagttacttgatgaagcagtggaggatattgatgataccactgattaccacagtttcagaaagaaatggggcaatgatccacgctttgagaatttggaccgcaaggatcgagaacatttgttgaatgaaagagtccttccattgaagaaggctgctgaagaaaaggctgaagcagtgcgtgctgctgctgcaactagttttaagtgcatgcttcaagaaaaaggagatattacagttaattcccgttggtccagggtgaaagatagtctgcggaatgacccaaggtacaaatctgttaagcatgaggatagggaagttttattcaacaagtacatatcagatctcaaagctgtggaagaggaagcagaacgagaggcaaaagctaaaagggatgagcaggataagttaagggaaagagagcgagaactacgcaagcggaaggaaagagaagaacaagaaacagagagggtgcgattgaaagttcgcaggaaggaggcagtgtcttcttttcaagctttacttgtggaaacaattaaagatcctcaggcatcttggacagaatctaagcccaagttggagaaggacccgcaaaggcgtgcagccaaccctgatctaaattcatctgacatggaaaagctcttccgcgaccacataaagatgctgcatgagcgatgtgcacacgagtttagagccctgttggctgaagtgttgactacagaagcagcctcccaagagacagaggatggaaaaacagttcttaactcatggtcaacagctaaacgttttctaaagtctgatcccagatataacaagatgccacgaaaagatagggaagtcgtgtggcaccgatatgccgaggagatgctgcggaagcaaatgtcatcacttgatcatagggaagacaggaaatcagatgctaaaagcagaagctctgccgatgctggaaggaccaccttcggatcaaggggtgcccatgaccgtagaggaatcggacctcatattctccgcacctttgagaggctcgaggacctcgccaccgccgttcaggattgtaatatacttgattttcatgagagtgggggctatatggcaaactatccaggaaaaggagccccttcgaatgggtctgtctatgtttgcaacttgccggaggggactgatgagaatatgctggccgaatattttggcaccatcgggttgttgaagaaagacaagcgaacaggtcgaccaaaaatttggttgtacagagacaaagcgacagatgaaccaaagggagatgctactgtgacatatgaggatccacatgctgcgtttgcagctgttgaatggtttaacgacaaggagtttcatggtaatgtgatcggggttcaaatagcagagtcgaaaagagatgaccagacatataaccctggggttgatctaagctctactggcggtgatccaatttatggcggagtagaggaaaatgctgaggacatgaatgggggtggcggtaagggccggggtgatgttcctgggaaagcatggcaacaagatggagactggacgtgtccgaatacaagcagttgtggcaatgtcaactttgcattccgtggtgtgtgcaaccgctgtggaagtgctcgaccaactggtgcttctgggggtggggcagggggtggtggtcgcggcaggggccgcggtgttgactccgggggccgtggtggtcctgttggtgctcctacagggggactctttggtccaaatgattggccttgtccaatgtgtggcaacattaactgggcaaagcgtacaaaatgcaatatatgcaacacaaataaacctgggcacaatgagggtggtgtaagaggagggcgtggtggtggttacaaagaacttgatgaagaagaactggaggaaatcaagcgacgtcggcgagaggccgaagaagatgatggagagatgtatgatgagtttggcaacctgaagaaaaaatttcgagctaaaacatcacagcaagctgagactggacgggctcttccaggtgctgggcgtgctggatgggaggttgaggaaataggtgttgttgatagagatggcagagaaagaaatagagatagaggaagggaacgtgatgatagagcaggcagcaagaacagggaaagagatgatagggataggcgtcgcagtcggagcagagaaagggatagggggaaagatcgacctcgagattatgatcgggagaaagaatatgggcgggagagggatagggatcggggcaggcaccgttattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0001085 GO:0001103 GO:0003674 GO:0003712 GO:0003713 GO:0003714 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0070491 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03040 ko04212 map03040 map04212

Pfam Domains

Protein Families

FF WW

Protein Analysis

1445

Amino Acids

158.38

Weight (kDa)

8.01

Isoelectric Point (pI)

52.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002956)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19840
fragaria_vesca	FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700
malus_domestica	MD13G1007900.v1.1 MD13G1008000.v1.1 MD16G1000200.v1.1
prunus_persica	Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1
pyrus_communis	pycom13g00650 pycom16g00500 pycom16g00510 pycom16g00520
rosa_chinensis	RchiOBHm_Chr4g0446421
rosa_laevigata	RLG00000005662
rosa_multiflora	Rmu_co8175444.1_g000001 Rmu_sc0008360.1_g000005 Rmu_sc0018208.1_g000001 Rmu_sc0025430.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386860
rosa_rugosa	Rorug04G0371200
rosa_samantha	Rh4AG432800 Rh4BG441900 Rh4CG459300 Rh4DG440700
rosa_wichuraiana	Rw4G036970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1242
AarI	CACCTGC	2 cut(s)	514, 824
AasI	GACNNNNNNGTC	1 cut(s)	3801
AatII	GACGTC	1 cut(s)	3976
Acc36I	ACCTGC	3 cut(s)	514, 824, 865
AccB1I	GGYRCC	5 cut(s)	1894, 2910, 3035, 3254, 4326
AccB7I	CCANNNNNTGG	4 cut(s)	401, 3515, 3830, 4091
AccI	GTMKAC	2 cut(s)	1233, 3292
AccII	CGCG	3 cut(s)	2712, 3732, 3744
AccIII	TCCGGA	1 cut(s)	1346
AclI	AACGTT	1 cut(s)	2848
AcoI	YGGCCR	3 cut(s)	27, 1557, 3240
AcsI	RAATTY	5 cut(s)	1339, 2158, 2683, 3300, 4037
AcuI	CTGAAG	5 cut(s)	1680, 2244, 2256, 2790, 4049
AcvI	CACGTG	2 cut(s)	977, 2006
AcyI	GRCGYC	3 cut(s)	115, 3973, 4225
AfaI	GTAC	5 cut(s)	1729, 2354, 2399, 3311, 3856
AflIII	ACRYGT	5 cut(s)	974, 976, 1794, 2003, 3614
AhlI	ACTAGT	2 cut(s)	341, 2261
AjiI	CACGTC	1 cut(s)	3615
AjuI	GAANNNNNNNTTGG	2 cut(s)	3685, 3717
AleI	CACNNNNGTG	1 cut(s)	1034
AloI	GAACNNNNNNTCC	4 cut(s)	679, 711, 2805, 2837
Alw21I	GWGCWC	7 cut(s)	841, 1555, 1666, 1992, 2746, 3688, 3784
Alw26I	GTCTC	8 cut(s)	54, 505, 1214, 1312, 2795, 3309, 3600, 4061
Alw44I	GTGCAC	1 cut(s)	2742
AlwNI	CAGNNNCTG	2 cut(s)	401, 4091
Ama87I	CYCGRG	2 cut(s)	3089, 4269
Aor13HI	TCCGGA	1 cut(s)	1346
ApaLI	GTGCAC	1 cut(s)	2742
ApoI	RAATTY	5 cut(s)	1339, 2158, 2683, 3300, 4037
ArsI	GACNNNNNNTTYG	2 cut(s)	3285, 3317
AspA2I	CCTAGG	1 cut(s)	917
AsuC2I	CCSGG	3 cut(s)	954, 3569, 3757
AsuII	TTCGAA	1 cut(s)	3185
AvaI	CYCGRG	2 cut(s)	3089, 4269
AvrII	CCTAGG	1 cut(s)	917
AxyI	CCTNAGG	2 cut(s)	1734, 2610
BaeGI	GKGCMC	4 cut(s)	272, 2746, 3040, 3894
BalI	TGGCCA	1 cut(s)	29
BamHI	GGATCC	1 cut(s)	3364
BanI	GGYRCC	5 cut(s)	1894, 2910, 3035, 3254, 4326
BanII	GRGCYC	5 cut(s)	229, 1666, 2761, 3181, 4081
BauI	CACGAG	1 cut(s)	2747
BbrPI	CACGTG	2 cut(s)	977, 2006
BbsI	GAAGAC	4 cut(s)	42, 1056, 2562, 2973
Bbv12I	GWGCWC	7 cut(s)	841, 1555, 1666, 1992, 2746, 3688, 3784
BbvCI	CCTCAGC	1 cut(s)	3537
BceAI	ACGGC	2 cut(s)	3092, 3747
BclI	TGATCA	2 cut(s)	139, 2956
BcnI	CCSGG	3 cut(s)	954, 3569, 3757
BcoDI	GTCTC	8 cut(s)	54, 505, 1214, 1312, 2795, 3309, 3600, 4061
BcuI	ACTAGT	2 cut(s)	341, 2261
BfaI	CTAG	5 cut(s)	342, 549, 786, 918, 2262
BfmI	CTRYAG	5 cut(s)	243, 771, 816, 2781, 3786
BfuAI	ACCTGC	3 cut(s)	514, 824, 865
BglI	GCCNNNNNGGC	2 cut(s)	1154, 2765
BglII	AGATCT	1 cut(s)	2407
BlnI	CCTAGG	1 cut(s)	917
BmeT110I	CYCGRG	2 cut(s)	3089, 4269
BmgBI	CACGTC	1 cut(s)	3615
BmrI	ACTGGG	3 cut(s)	389, 534, 3853
BmuI	ACTGGG	3 cut(s)	389, 534, 3853
BpiI	GAAGAC	4 cut(s)	42, 1056, 2562, 2973
BpmI	CTGGAG	2 cut(s)	1680, 3977
Bpu10I	CCTNAGC	1 cut(s)	3537
Bpu14I	TTCGAA	1 cut(s)	3185
BpuEI	CTTGAG	3 cut(s)	180, 1172, 1696
BpuMI	CCSGG	3 cut(s)	954, 3569, 3757
BsaAI	YACGTR	2 cut(s)	977, 2006
BsaBI	GATNNNNATC	4 cut(s)	80, 1618, 4278, 4314
BsaHI	GRCGYC	3 cut(s)	115, 3973, 4225
BsaI	GGTCTC	2 cut(s)	54, 1312
BsaWI	WCCGGW	1 cut(s)	1346
BsaXI	ACNNNNNCTCC	4 cut(s)	1653, 1683, 2552, 2582
Bse21I	CCTNAGG	2 cut(s)	1734, 2610
Bse3DI	GCAATG	2 cut(s)	2146, 3646
Bse8I	GATNNNNATC	4 cut(s)	80, 1618, 4278, 4314
BseAI	TCCGGA	1 cut(s)	1346
BseJI	GATNNNNATC	4 cut(s)	80, 1618, 4278, 4314
BseMI	GCAATG	2 cut(s)	2146, 3646
BseMII	CTCAG	7 cut(s)	341, 381, 1028, 2054, 2624, 3528, 4056
BseRI	GAGGAG	8 cut(s)	89, 1307, 1731, 1795, 1862, 2027, 2939, 3927
BseSI	GKGCMC	4 cut(s)	272, 2746, 3040, 3894
BseYI	CCCAGC	1 cut(s)	4091
BsgI	GTGCAG	8 cut(s)	200, 726, 735, 1334, 1608, 1628, 2028, 2685
Bsh1236I	CGCG	3 cut(s)	2712, 3732, 3744
BshNI	GGYRCC	5 cut(s)	1894, 2910, 3035, 3254, 4326
BsiHKAI	GWGCWC	7 cut(s)	841, 1555, 1666, 1992, 2746, 3688, 3784
BsiHKCI	CYCGRG	2 cut(s)	3089, 4269
BsiSI	CCGG	7 cut(s)	239, 954, 1347, 1556, 3215, 3568, 3756
BslFI	GGGAC	8 cut(s)	364, 408, 639, 681, 880, 942, 3235, 3807
BsmAI	GTCTC	8 cut(s)	54, 505, 1214, 1312, 2795, 3309, 3600, 4061
BsmFI	GGGAC	8 cut(s)	364, 408, 639, 681, 880, 942, 3235, 3807
BsmI	GAATGC	3 cut(s)	535, 684, 3653
Bso31I	GGTCTC	2 cut(s)	54, 1312
BsoBI	CYCGRG	2 cut(s)	3089, 4269
Bsp119I	TTCGAA	1 cut(s)	3185
Bsp13I	TCCGGA	1 cut(s)	1346
Bsp1407I	TGTACA	1 cut(s)	3309
Bsp19I	CCATGG	1 cut(s)	1584
BspCNI	CTCAG	7 cut(s)	340, 380, 1027, 2053, 2623, 3529, 4057
BspEI	TCCGGA	1 cut(s)	1346
BspFNI	CGCG	3 cut(s)	2712, 3732, 3744
BspHI	TCATGA	1 cut(s)	3136
BspMAI	CTGCAG	2 cut(s)	247, 820
BspMI	ACCTGC	3 cut(s)	514, 824, 865
BspQI	GCTCTTC	2 cut(s)	2711, 4086
BspT104I	TTCGAA	1 cut(s)	3185
BspT107I	GGYRCC	5 cut(s)	1894, 2910, 3035, 3254, 4326
BspTNI	GGTCTC	2 cut(s)	54, 1312
BsrDI	GCAATG	2 cut(s)	2146, 3646
BsrGI	TGTACA	1 cut(s)	3309
BssNAI	GTATAC	1 cut(s)	1234
BssNI	GRCGYC	3 cut(s)	115, 3973, 4225
BssSI	CACGAG	1 cut(s)	2747
BssT1I	CCWWGG	4 cut(s)	917, 1410, 1584, 2348
Bst1107I	GTATAC	1 cut(s)	1234
Bst2BI	CACGAG	1 cut(s)	2747
Bst6I	CTCTTC	3 cut(s)	2418, 2711, 4086
BstACI	GRCGYC	3 cut(s)	115, 3973, 4225
BstAPI	GCANNNNNTGC	5 cut(s)	178, 749, 941, 2246, 3870
BstAUI	TGTACA	1 cut(s)	3309
BstBAI	YACGTR	2 cut(s)	977, 2006
BstBI	TTCGAA	1 cut(s)	3185
BstDSI	CCRYGG	5 cut(s)	877, 1584, 3658, 3742, 3763
BstEII	GGTNACC	2 cut(s)	165, 921
BstENI	CCTNNNNNAGG	1 cut(s)	3082
BstFNI	CGCG	3 cut(s)	2712, 3732, 3744
BstMAI	GTCTC	8 cut(s)	54, 505, 1214, 1312, 2795, 3309, 3600, 4061
BstNSI	RCATGY	4 cut(s)	1148, 1798, 2278, 3374
BstPI	GGTNACC	2 cut(s)	165, 921
BstSFI	CTRYAG	5 cut(s)	243, 771, 816, 2781, 3786
BstSLI	GKGCMC	4 cut(s)	272, 2746, 3040, 3894
BstUI	CGCG	3 cut(s)	2712, 3732, 3744
BstV2I	GAAGAC	4 cut(s)	42, 1056, 2562, 2973
BstX2I	RGATCY	4 cut(s)	1428, 2407, 2605, 3364
BstXI	CCANNNNNNTGG	2 cut(s)	3303, 3813
BstYI	RGATCY	4 cut(s)	1428, 2407, 2605, 3364
BstZ17I	GTATAC	1 cut(s)	1234
Bsu36I	CCTNAGG	2 cut(s)	1734, 2610
BtgI	CCRYGG	5 cut(s)	877, 1584, 3658, 3742, 3763
BtgZI	GCGATG	2 cut(s)	138, 2752
BtrI	CACGTC	1 cut(s)	3615
BtsI	GCAGTG	4 cut(s)	716, 2091, 2247, 2571
BtsIMutI	CAGTG	9 cut(s)	28, 71, 295, 716, 1503, 2091, 2106, 2247, 2571
BveI	ACCTGC	3 cut(s)	514, 824, 865
CaiI	CAGNNNCTG	2 cut(s)	401, 4091
CciI	TCATGA	1 cut(s)	3136
Cfr42I	CCGCGG	1 cut(s)	3745
CseI	GACGC	3 cut(s)	123, 1832, 4214
Csp6I	GTAC	5 cut(s)	1728, 2353, 2398, 3310, 3855
CspCI	CAANNNNNGTGG	4 cut(s)	3658, 3693, 3883, 3918
CviQI	GTAC	5 cut(s)	1728, 2353, 2398, 3310, 3855
DrdI	GACNNNNNNGTC	1 cut(s)	3801
DseDI	GACNNNNNNGTC	1 cut(s)	3801
EaeI	YGGCCR	3 cut(s)	27, 1557, 3240
Eam1104I	CTCTTC	3 cut(s)	2418, 2711, 4086
EarI	CTCTTC	3 cut(s)	2418, 2711, 4086
EciI	GGCGGA	1 cut(s)	3534
Ecl136II	GAGCTC	1 cut(s)	1664
Eco130I	CCWWGG	4 cut(s)	917, 1410, 1584, 2348
Eco147I	AGGCCT	1 cut(s)	1598
Eco24I	GRGCYC	5 cut(s)	229, 1666, 2761, 3181, 4081
Eco31I	GGTCTC	2 cut(s)	54, 1312
Eco32I	GATATC	1 cut(s)	78
Eco53kI	GAGCTC	1 cut(s)	1664
Eco57I	CTGAAG	5 cut(s)	1680, 2244, 2256, 2790, 4049
Eco72I	CACGTG	2 cut(s)	977, 2006
Eco81I	CCTNAGG	2 cut(s)	1734, 2610
Eco88I	CYCGRG	2 cut(s)	3089, 4269
Eco91I	GGTNACC	2 cut(s)	165, 921
EcoICRI	GAGCTC	1 cut(s)	1664
EcoNI	CCTNNNNNAGG	1 cut(s)	3082
EcoO109I	RGGNCCY	3 cut(s)	1691, 2650, 3094
EcoO65I	GGTNACC	2 cut(s)	165, 921
EcoRV	GATATC	1 cut(s)	78
EcoT14I	CCWWGG	4 cut(s)	917, 1410, 1584, 2348
EcoT38I	GRGCYC	5 cut(s)	229, 1666, 2761, 3181, 4081
ErhI	CCWWGG	4 cut(s)	917, 1410, 1584, 2348
FalI	AAGNNNNNCTT	2 cut(s)	2571, 2603
FaqI	GGGAC	8 cut(s)	364, 408, 639, 681, 880, 942, 3235, 3807
FauI	CCCGC	3 cut(s)	259, 2661, 4293
FauNDI	CATATG	1 cut(s)	3358
FbaI	TGATCA	2 cut(s)	139, 2956
FblI	GTMKAC	2 cut(s)	1233, 3292
FriOI	GRGCYC	5 cut(s)	229, 1666, 2761, 3181, 4081
FspBI	CTAG	5 cut(s)	342, 549, 786, 918, 2262
GsaI	CCCAGC	1 cut(s)	4095
GsuI	CTGGAG	2 cut(s)	1680, 3977
HapII	CCGG	7 cut(s)	239, 954, 1347, 1556, 3215, 3568, 3756
HgaI	GACGC	3 cut(s)	123, 1832, 4214
Hin1I	GRCGYC	3 cut(s)	115, 3973, 4225
HincII	GTYRAC	6 cut(s)	19, 2778, 2838, 3293, 3646, 3751
HindII	GTYRAC	6 cut(s)	19, 2778, 2838, 3293, 3646, 3751
HindIII	AAGCTT	1 cut(s)	2580
HpaI	GTTAAC	1 cut(s)	19
HpaII	CCGG	7 cut(s)	239, 954, 1347, 1556, 3215, 3568, 3756
Hpy99I	CGWCG	5 cut(s)	59, 117, 3975, 3978, 4230
HpyCH4IV	ACGT	6 cut(s)	976, 2005, 2848, 3614, 3973, 4174
HpySE526I	ACGT	6 cut(s)	976, 2005, 2848, 3614, 3973, 4174
Hsp92I	GRCGYC	3 cut(s)	115, 3973, 4225
Kpn2I	TCCGGA	1 cut(s)	1346
Ksp22I	TGATCA	2 cut(s)	139, 2956
KspAI	GTTAAC	1 cut(s)	19
KspI	CCGCGG	1 cut(s)	3745
LguI	GCTCTTC	2 cut(s)	2711, 4086
MaeI	CTAG	5 cut(s)	342, 549, 786, 918, 2262
MaeII	ACGT	6 cut(s)	976, 2005, 2848, 3614, 3973, 4174
MfeI	CAATTG	1 cut(s)	1190
MflI	RGATCY	4 cut(s)	1428, 2407, 2605, 3364
MlsI	TGGCCA	1 cut(s)	29
MluNI	TGGCCA	1 cut(s)	29
MlyI	GAGTC	9 cut(s)	56, 664, 891, 1502, 1796, 2208, 3455, 3746, 3789
MmeI	TCCRAC	3 cut(s)	37, 2622, 4214
Mox20I	TGGCCA	1 cut(s)	29
MroI	TCCGGA	1 cut(s)	1346
MscI	TGGCCA	1 cut(s)	29
MslI	CAYNNNNRTG	5 cut(s)	1034, 2723, 2916, 3141, 3420
Msp20I	TGGCCA	1 cut(s)	29
MspA1I	CMGCKG	5 cut(s)	478, 1422, 3386, 3675, 3744
MspI	CCGG	7 cut(s)	239, 954, 1347, 1556, 3215, 3568, 3756
MunI	CAATTG	1 cut(s)	1190
Mva1269I	GAATGC	3 cut(s)	535, 684, 3653
MvnI	CGCG	3 cut(s)	2712, 3732, 3744
NciI	CCSGG	3 cut(s)	954, 3569, 3757
NcoI	CCATGG	1 cut(s)	1584
NdeI	CATATG	1 cut(s)	3358
NmeAIII	GCCGAG	1 cut(s)	2947
NmuCI	GTSAC	5 cut(s)	921, 1027, 1249, 1469, 3352
NspI	RCATGY	4 cut(s)	1148, 1798, 2278, 3374
NspV	TTCGAA	1 cut(s)	3185
OliI	CACNNNNGTG	1 cut(s)	1034
PaeI	GCATGC	1 cut(s)	2278
PaeR7I	CTCGAG	2 cut(s)	3089, 4269
PagI	TCATGA	1 cut(s)	3136
PaqCI	CACCTGC	2 cut(s)	514, 824
PasI	CCCWGGG	1 cut(s)	3476
PceI	AGGCCT	1 cut(s)	1598
PciI	ACATGT	1 cut(s)	1794
PciSI	GCTCTTC	2 cut(s)	2711, 4086
PcsI	WCGNNNNNNNCGW	1 cut(s)	3105
PctI	GAATGC	3 cut(s)	535, 684, 3653
PfeI	GAWTC	8 cut(s)	761, 1010, 1259, 1529, 1655, 1814, 2627, 3054
PflMI	CCANNNNNTGG	4 cut(s)	401, 3515, 3830, 4091
PfoI	TCCNGGA	2 cut(s)	1279, 3166
PleI	GAGTC	9 cut(s)	55, 664, 890, 1501, 1796, 2207, 3454, 3746, 3789
PmaCI	CACGTG	2 cut(s)	977, 2006
PmlI	CACGTG	2 cut(s)	977, 2006
PpsI	GAGTC	9 cut(s)	55, 664, 890, 1501, 1796, 2207, 3454, 3746, 3789
Ppu21I	YACGTR	2 cut(s)	977, 2006
PpuMI	RGGWCCY	3 cut(s)	1691, 2650, 3094
PscI	ACATGT	1 cut(s)	1794
PsiI	TTATAA	1 cut(s)	1242
Psp124BI	GAGCTC	1 cut(s)	1666
Psp1406I	AACGTT	1 cut(s)	2848
Psp5II	RGGWCCY	3 cut(s)	1691, 2650, 3094
PspCI	CACGTG	2 cut(s)	977, 2006
PspEI	GGTNACC	2 cut(s)	165, 921
PspFI	CCCAGC	1 cut(s)	4091
PspPPI	RGGWCCY	3 cut(s)	1691, 2650, 3094
PspXI	VCTCGAGB	1 cut(s)	3089
PstI	CTGCAG	2 cut(s)	247, 820
PstNI	CAGNNNCTG	2 cut(s)	401, 4091
PsuI	RGATCY	4 cut(s)	1428, 2407, 2605, 3364
PvuII	CAGCTG	3 cut(s)	478, 1422, 3386
RsaI	GTAC	5 cut(s)	1729, 2354, 2399, 3311, 3856
RsaNI	GTAC	5 cut(s)	1728, 2353, 2398, 3310, 3855
RseI	CAYNNNNRTG	5 cut(s)	1034, 2723, 2916, 3141, 3420
SacI	GAGCTC	1 cut(s)	1666
SacII	CCGCGG	1 cut(s)	3745
SalI	GTCGAC	1 cut(s)	3291
SapI	GCTCTTC	2 cut(s)	2711, 4086
SchI	GAGTC	9 cut(s)	56, 664, 891, 1502, 1796, 2208, 3455, 3746, 3789
SfcI	CTRYAG	5 cut(s)	243, 771, 816, 2781, 3786
Sfr274I	CTCGAG	2 cut(s)	3089, 4269
Sfr303I	CCGCGG	1 cut(s)	3745
SfuI	TTCGAA	1 cut(s)	3185
SgrBI	CCGCGG	1 cut(s)	3745
SlaI	CTCGAG	2 cut(s)	3089, 4269
SmiMI	CAYNNNNRTG	5 cut(s)	1034, 2723, 2916, 3141, 3420
SmlI	CTYRAG	5 cut(s)	195, 1151, 1711, 3089, 4269
SmoI	CTYRAG	5 cut(s)	195, 1151, 1711, 3089, 4269
SpeI	ACTAGT	2 cut(s)	341, 2261
SphI	GCATGC	1 cut(s)	2278
SseBI	AGGCCT	1 cut(s)	1598
SspI	AATATT	1 cut(s)	3248
SspMI	CTAG	5 cut(s)	342, 549, 786, 918, 2262
SstI	GAGCTC	1 cut(s)	1666
StuI	AGGCCT	1 cut(s)	1598
StyI	CCWWGG	4 cut(s)	917, 1410, 1584, 2348
TaiI	ACGT	6 cut(s)	979, 2008, 2851, 3617, 3976, 4177
TatI	WGTACW	3 cut(s)	1727, 2397, 3309
TauI	GCSGC	2 cut(s)	3735, 3744
TfiI	GAWTC	8 cut(s)	761, 1010, 1259, 1529, 1655, 1814, 2627, 3054
TscAI	CASTG	9 cut(s)	28, 78, 295, 723, 1503, 2091, 2113, 2247, 2571
TseFI	GTSAC	5 cut(s)	921, 1027, 1249, 1469, 3352
Tsp45I	GTSAC	5 cut(s)	921, 1027, 1249, 1469, 3352
TspGWI	ACGGA	3 cut(s)	43, 894, 3647
TspRI	CASTG	9 cut(s)	28, 78, 295, 723, 1503, 2091, 2113, 2247, 2571
Van91I	CCANNNNNTGG	4 cut(s)	401, 3515, 3830, 4091
VneI	GTGCAC	1 cut(s)	2742
XagI	CCTNNNNNAGG	1 cut(s)	3082
XapI	RAATTY	5 cut(s)	1339, 2158, 2683, 3300, 4037
XceI	RCATGY	4 cut(s)	1148, 1798, 2278, 3374
XcmI	CCANNNNNNNNNTGG	2 cut(s)	636, 1905
XhoI	CTCGAG	2 cut(s)	3089, 4269
XmaJI	CCTAGG	1 cut(s)	917
XmiI	GTMKAC	2 cut(s)	1233, 3292
XspI	CTAG	5 cut(s)	342, 549, 786, 918, 2262
ZraI	GACGTC	1 cut(s)	3974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.