Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002956

Physical Location & Seq

Genomic Coordinates Reverse (-)

66588528 .. 66597397

Gene Structure 8870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41394

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2907 bp

ATGGCATCGCCAGCTTGGTTACCGCAGGATGTGCAGCCATCTGTATCTCAAGCCCCCGTTTCTGGTTCACCAGCAGGGGCTCCTTCAACTCCGACTGCAGCTCCACTTGCTTCAAGTGCGGGCACACCGTCATTCTCGTACAGTGTGCCTCCAAATGCAAATATCACTTTTGGAACCTCTCAGCAGCCATCAACTAGTCCTGGGACTAAGTTTAATCTCTCAGCATCTCCAATGGTTATTCAACCCCCAGTTCCTGGCTTGTCATCTGCTGCCAGTCCCTCTTTCTCATACAACATTCCAAAATCTAATTATCCCTTCCCTAATAATCAGCTGTTTCAATCTGGCATGAATGTCTCACCTGCTATTGCACAAGAAACTGGGAATGCCTCATTGTCATCAACTAGCTCTCATTCTGGTTACTTGGCTGCTTCTACGTCTTCAAGTTCCACAATGGTTCTATCATCAGCTCCTAATGTGGGACCAACAACTTCATGGGTTCCCACTACCCCATCATTTAATATGACTCATGGAATGCCTGGAACTCCTGGTCCCCCTGGAACAGCCCACTCACTGCAAATGTCCTTTAATCTGACTGCACGATCTGCACCTGTTGATTCTTCTTCTATAGCCCTTAGACCTAGCTTGCAAACACCTTCTGCTGGATCATCTGCAGTTCTGCCACAAGCAGGTGCTCCCTACCCATCTTTACCTGCTATGGCTGCTAATCCCCACGGAGTCTGGTTGCAGTCCCCACAGATGGAAGGCATACCTAGGTCACCATTTCAGGCATATCCTGCTGCTTTTCCCGGTCCCTTTCCTTTGCCTACACGTGTTATGCCTCCCCCTTCTGTTCTTATACCTGATTCTCAGCCTCCTGGTGTCACTCCTGTGGGAAATACGGTAGCAACATCCTTGTCTTCCAGTTCTGGTCATCAACTTGCACCTTCTTCATGGATGCAGACAGAATTACCTCATCCTGGTATTGATGACAGGAAACATGCCCTTGAGGCAGGCAACCAACATATAGCTGCTGTCAATCAACAATTGGATGCTTGGACTGCCCACAAGACAGAGACAGGAGTTGTATACTATTATAATGCTGTGACTGGTGAATCAACTTATGAGAAGCCTCCTGGATTTAAGGAGGAGCCTGATAAGGTCTCTGTGCAGCCAGTTCCAGTTTCAACGGTGAATTTGTCCGGAACTGATTGGGTATTGGTTACAACGAGTGATGGGAAAAAGTTTTACCATAATAGCAAAACCAAGGTTAGCAGCTGGCAGATCCCAAATGAAGTGATAGAAATGAGAAAGAAGCAGGATGGTGACACGCCAAAAGAACATCCAGAGTCAGTGCCAAATAATAGTCAAATGGTTGAAAAGGAATCTGCTCCAATCAGTTTGAGTGCTCCAGCCATTAGCACGGGTGGTCGTGAAGCCATGGCTTACAAGGCCTCAACTGTGCAGGGATCATCATCTGCACTCGACCTGATTAAAAAGAAGTTGCAGGATTCTGGAGCTCCTGTTACTTCATCACCAGTTTCAGGACCTTCAGAGTTAAATGGCTCAAGAGGAGTTGAGAGTACACCTAAGGTCCAGCAGAGTGAGAATAGCAAGGATAAGCTAAATGACACTAATGGGGATGGTAACATGTCTGACTCCTCATCAGATTCAGAGGATGCAGATAGTGGGCCAACAAAAGAGGAGGGTATTATTCAATTCAAGGAGATGCTCAAAGAACGGGGAGTGGCACCATTTTCAAAGTGGGAGAAGGAACTGCCAAAGATAGTGTTTGATCCACGATTTAAGGCCATTCCAAGTTATTCAAGGAGAGCCTTGTTTGAGCACTATGTTAAGACACGTGCAGAGGAGGAACGCAAGGAGAAACGAGCAGCTCAGAAGGCTGCAATAGAGGCATTTAAGCAGTTACTTGATGAAGCAGTGGAGGATATTGATGATACCACTGATTACCACAGTTTCAGAAAGAAATGGGGCAATGATCCACGCTTTGAGAATTTGGACCGCAAGGATCGAGAACATTTGTTGAATGAAAGAGTCCTTCCATTGAAGAAGGCTGCTGAAGAAAAGGCTGAAGCAGTGCGTGCTGCTGCTGCAACTAGTTTTAAGTGCATGCTTCAAGAAAAAGGAGATATTACAGTTAATTCCCGTTGGTCCAGGGTGAAAGATAGTCTGCGGAATGACCCAAGGTACAAATCTGTTAAGCATGAGGATAGGGAAGTTTTATTCAACAAGTACATATCAGATCTCAAAGCTGTGGAAGAGGAAGCAGAACGAGAGGCAAAAGCTAAAAGGGATGAGCAGGATAAGTTAAGGGAAAGAGAGCGAGAACTACGCAAGCGGAAGGAAAGAGAAGAACAAGAAACAGAGAGGGTGCGATTGAAAGTTCGCAGGAAGGAGGCAGTGTCTTCTTTTCAAGCTTTACTTGTGGAAACAATTAAAGATCCTCAGGCATCTTGGACAGAATCTAAGCCCAAGTTGGAGAAGGACCCGCAAAGGCGTGCAGCCAACCCTGATCTGAATTCATCTGACATGGAAAAGCTCTTCCGCGACCACATAAAGATGCTGCATGAGCGATGTGCACACGAGTTTAGAGCCCTGTTGGCTGAAGTGTTGACTACAGAAGCAGCCTCCCAAGAGACAGAGGATGGAAAAACAGTTCTTAACTCATGGTCAACAGCTAAACGTTTTCTAAAGTCTGATCCCAGATATAACAAGATGCCACGAAAAGATAGGGAAGTCGTGTGGCACCGATATGCCGAGGAGATGCTGCGGAAGCAAATGTCATCACTTGATCATAGGGAAGACAGGAAATCAGATGCTAAAAGCAGAAGCTCTGCCGATGCTGGAAGGACCACCTTCGGATCAAGGGGTGCCCATGACCGTAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0001085 GO:0001103 GO:0003674 GO:0003712 GO:0003713 GO:0003714 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0070491 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03040 ko04212 map03040 map04212

Pfam Domains

Protein Families

FF WW

Protein Analysis

968

Amino Acids

106.15

Weight (kDa)

8.32

Isoelectric Point (pI)

57.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	351 - 377	2.1e-08	WW domain
WW_TCERG1	PF23517	392 - 434	3.1e-09	TCERG1 WW domain
WW	PF00397	402 - 429	1.3e-06	WW domain
FF	PF01846	572 - 616	2.7e-12	FF domain
FF	PF01846	635 - 683	1.1e-08	FF domain
FF	PF01846	705 - 751	2.6e-12	FF domain
FF	PF01846	805 - 857	1.5e-06	FF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002956)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19840
fragaria_vesca	FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700
malus_domestica	MD13G1007900.v1.1 MD13G1008000.v1.1 MD16G1000200.v1.1
prunus_persica	Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1
pyrus_communis	pycom13g00650 pycom16g00500 pycom16g00510 pycom16g00520
rosa_chinensis	RchiOBHm_Chr4g0446421
rosa_laevigata	RLG00000005662
rosa_multiflora	Rmu_co8175444.1_g000001 Rmu_sc0008360.1_g000005 Rmu_sc0018208.1_g000001 Rmu_sc0025430.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386860
rosa_rugosa	Rorug04G0371200
rosa_samantha	Rh4AG432800 Rh4BG441900 Rh4CG459300 Rh4DG440700
rosa_wichuraiana	Rw4G036970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1095
AarI	CACCTGC	2 cut(s)	367, 677
Acc36I	ACCTGC	3 cut(s)	367, 677, 718
AccB1I	GGYRCC	3 cut(s)	1747, 2763, 2888
AccB7I	CCANNNNNTGG	1 cut(s)	254
AccI	GTMKAC	1 cut(s)	1086
AccII	CGCG	1 cut(s)	2565
AccIII	TCCGGA	1 cut(s)	1199
AciI	CCGC	8 cut(s)	23, 119, 2020, 2191, 2356, 2507, 2563, 2788
AclI	AACGTT	1 cut(s)	2701
AclWI	GGATC	9 cut(s)	670, 1276, 1474, 1787, 1991, 2034, 2453, 2711, 2887
AcsI	RAATTY	3 cut(s)	1192, 2011, 2536
AcuI	CTGAAG	4 cut(s)	1533, 2097, 2109, 2643
AcvI	CACGTG	2 cut(s)	830, 1859
AfaI	GTAC	4 cut(s)	140, 1582, 2207, 2252
AfiI	CCNNNNNNNGG	8 cut(s)	62, 254, 476, 659, 686, 757, 977, 1541
AflIII	ACRYGT	4 cut(s)	827, 829, 1647, 1856
AhlI	ACTAGT	2 cut(s)	194, 2114
AjnI	CCWGG	9 cut(s)	199, 253, 535, 544, 553, 874, 976, 1132, 2171
AleI	CACNNNNGTG	1 cut(s)	887
AloI	GAACNNNNNNTCC	4 cut(s)	532, 564, 2658, 2690
Alw21I	GWGCWC	5 cut(s)	694, 1408, 1519, 1845, 2599
Alw26I	GTCTC	4 cut(s)	358, 1067, 1165, 2648
Alw44I	GTGCAC	1 cut(s)	2595
AlwI	GGATC	9 cut(s)	670, 1276, 1474, 1787, 1991, 2034, 2453, 2711, 2887
AlwNI	CAGNNNCTG	1 cut(s)	254
Aor13HI	TCCGGA	1 cut(s)	1199
AoxI	GGCC	3 cut(s)	1449, 1688, 1806
ApaLI	GTGCAC	1 cut(s)	2595
ApoI	RAATTY	3 cut(s)	1192, 2011, 2536
AspA2I	CCTAGG	1 cut(s)	770
AsuC2I	CCSGG	1 cut(s)	807
AsuHPI	GGTGA	8 cut(s)	60, 348, 768, 1121, 1201, 1334, 1524, 2188
AvaII	GGWCC	9 cut(s)	479, 548, 809, 1544, 1591, 2017, 2169, 2503, 2868
AvrII	CCTAGG	1 cut(s)	770
AxyI	CCTNAGG	2 cut(s)	1587, 2463
BaeGI	GKGCMC	3 cut(s)	125, 2599, 2893
BanI	GGYRCC	3 cut(s)	1747, 2763, 2888
BanII	GRGCYC	3 cut(s)	82, 1519, 2614
BauI	CACGAG	1 cut(s)	2600
BbrPI	CACGTG	2 cut(s)	830, 1859
BbsI	GAAGAC	4 cut(s)	429, 909, 2415, 2826
Bbv12I	GWGCWC	5 cut(s)	694, 1408, 1519, 1845, 2599
BccI	CCATC	9 cut(s)	46, 196, 517, 709, 751, 1226, 1313, 1634, 2657
BciT130I	CCWGG	9 cut(s)	201, 255, 537, 546, 555, 876, 978, 1134, 2173
BclI	TGATCA	1 cut(s)	2809
BcnI	CCSGG	1 cut(s)	807
BcoDI	GTCTC	4 cut(s)	358, 1067, 1165, 2648
BcuI	ACTAGT	2 cut(s)	194, 2114
BfaI	CTAG	5 cut(s)	195, 402, 639, 771, 2115
BfmI	CTRYAG	4 cut(s)	96, 624, 669, 2634
BfuAI	ACCTGC	3 cut(s)	367, 677, 718
BglI	GCCNNNNNGGC	2 cut(s)	1007, 2618
BglII	AGATCT	1 cut(s)	2260
BlnI	CCTAGG	1 cut(s)	770
Bme18I	GGWCC	9 cut(s)	479, 548, 809, 1544, 1591, 2017, 2169, 2503, 2868
BmrI	ACTGGG	2 cut(s)	242, 387
BmuI	ACTGGG	2 cut(s)	242, 387
BpiI	GAAGAC	4 cut(s)	429, 909, 2415, 2826
BpmI	CTGGAG	2 cut(s)	1392, 1533
BpuEI	CTTGAG	3 cut(s)	33, 1025, 1549
BpuMI	CCSGG	1 cut(s)	807
BsaAI	YACGTR	2 cut(s)	830, 1859
BsaBI	GATNNNNATC	1 cut(s)	1471
BsaI	GGTCTC	1 cut(s)	1165
BsaJI	CCNNGG	9 cut(s)	200, 553, 730, 770, 1263, 1437, 2172, 2201, 2775
BsaWI	WCCGGW	1 cut(s)	1199
BsaXI	ACNNNNNCTCC	6 cut(s)	85, 115, 1506, 1536, 2405, 2435
Bsc4I	CCNNNNNNNGG	8 cut(s)	62, 254, 476, 659, 686, 757, 977, 1541
Bse1I	ACTGG	8 cut(s)	248, 273, 382, 921, 1111, 1172, 1178, 1535
Bse21I	CCTNAGG	2 cut(s)	1587, 2463
Bse3DI	GCAATG	1 cut(s)	1999
Bse8I	GATNNNNATC	1 cut(s)	1471
BseAI	TCCGGA	1 cut(s)	1199
BseBI	CCWGG	9 cut(s)	201, 255, 537, 546, 555, 876, 978, 1134, 2173
BseDI	CCNNGG	9 cut(s)	200, 553, 730, 770, 1263, 1437, 2172, 2201, 2775
BseJI	GATNNNNATC	1 cut(s)	1471
BseLI	CCNNNNNNNGG	8 cut(s)	62, 254, 476, 659, 686, 757, 977, 1541
BseMI	GCAATG	1 cut(s)	1999
BseMII	CTCAG	5 cut(s)	194, 234, 881, 1907, 2477
BseNI	ACTGG	8 cut(s)	248, 273, 382, 921, 1111, 1172, 1178, 1535
BseRI	GAGGAG	6 cut(s)	1160, 1584, 1648, 1715, 1880, 2792
BseSI	GKGCMC	3 cut(s)	125, 2599, 2893
BsgI	GTGCAG	8 cut(s)	53, 579, 588, 1187, 1461, 1481, 1881, 2538
Bsh1236I	CGCG	1 cut(s)	2565
BshFI	GGCC	3 cut(s)	1451, 1690, 1808
BshNI	GGYRCC	3 cut(s)	1747, 2763, 2888
BsiHKAI	GWGCWC	5 cut(s)	694, 1408, 1519, 1845, 2599
BsiSI	CCGG	2 cut(s)	807, 1200
BslFI	GGGAC	6 cut(s)	217, 261, 492, 534, 733, 795
BslI	CCNNNNNNNGG	8 cut(s)	62, 254, 476, 659, 686, 757, 977, 1541
BsmAI	GTCTC	4 cut(s)	358, 1067, 1165, 2648
BsmFI	GGGAC	6 cut(s)	217, 261, 492, 534, 733, 795
BsmI	GAATGC	2 cut(s)	388, 537
BsnI	GGCC	3 cut(s)	1451, 1690, 1808
Bso31I	GGTCTC	1 cut(s)	1165
Bsp1286I	GDGCHC	9 cut(s)	82, 125, 694, 1408, 1519, 1845, 2599, 2614, 2893
Bsp13I	TCCGGA	1 cut(s)	1199
Bsp19I	CCATGG	1 cut(s)	1437
BspACI	CCGC	8 cut(s)	23, 119, 2020, 2191, 2356, 2507, 2563, 2788
BspANI	GGCC	3 cut(s)	1451, 1690, 1808
BspCNI	CTCAG	5 cut(s)	193, 233, 880, 1906, 2476
BspEI	TCCGGA	1 cut(s)	1199
BspFNI	CGCG	1 cut(s)	2565
BspMAI	CTGCAG	2 cut(s)	100, 673
BspMI	ACCTGC	3 cut(s)	367, 677, 718
BspPI	GGATC	9 cut(s)	670, 1276, 1474, 1787, 1991, 2034, 2453, 2711, 2887
BspQI	GCTCTTC	1 cut(s)	2564
BspT107I	GGYRCC	3 cut(s)	1747, 2763, 2888
BspTNI	GGTCTC	1 cut(s)	1165
BsrDI	GCAATG	1 cut(s)	1999
BsrI	ACTGG	8 cut(s)	248, 273, 382, 921, 1111, 1172, 1178, 1535
BssECI	CCNNGG	9 cut(s)	200, 553, 730, 770, 1263, 1437, 2172, 2201, 2775
BssNAI	GTATAC	1 cut(s)	1087
BssSI	CACGAG	1 cut(s)	2600
BssT1I	CCWWGG	4 cut(s)	770, 1263, 1437, 2201
Bst1107I	GTATAC	1 cut(s)	1087
Bst2BI	CACGAG	1 cut(s)	2600
Bst2UI	CCWGG	9 cut(s)	201, 255, 537, 546, 555, 876, 978, 1134, 2173
Bst4CI	ACNGT	9 cut(s)	129, 143, 901, 1189, 1459, 1973, 2155, 2674, 2900
Bst6I	CTCTTC	2 cut(s)	2271, 2564
BstAPI	GCANNNNNTGC	4 cut(s)	31, 602, 794, 2099
BstBAI	YACGTR	2 cut(s)	830, 1859
BstC8I	GCNNGC	9 cut(s)	12, 121, 644, 1012, 1277, 2100, 2129, 2354, 2517
BstDEI	CTNAG	9 cut(s)	180, 207, 220, 632, 867, 1587, 1893, 2463, 2484
BstDSI	CCRYGG	2 cut(s)	730, 1437
BstEII	GGTNACC	2 cut(s)	18, 774
BstFNI	CGCG	1 cut(s)	2565
BstMAI	GTCTC	4 cut(s)	358, 1067, 1165, 2648
BstNI	CCWGG	9 cut(s)	201, 255, 537, 546, 555, 876, 978, 1134, 2173
BstNSI	RCATGY	3 cut(s)	1001, 1651, 2131
BstPI	GGTNACC	2 cut(s)	18, 774
BstSFI	CTRYAG	4 cut(s)	96, 624, 669, 2634
BstSLI	GKGCMC	3 cut(s)	125, 2599, 2893
BstUI	CGCG	1 cut(s)	2565
BstV2I	GAAGAC	4 cut(s)	429, 909, 2415, 2826
BstX2I	RGATCY	3 cut(s)	1281, 2260, 2458
BstYI	RGATCY	3 cut(s)	1281, 2260, 2458
BstZ17I	GTATAC	1 cut(s)	1087
Bsu36I	CCTNAGG	2 cut(s)	1587, 2463
BsuRI	GGCC	3 cut(s)	1451, 1690, 1808
BtgI	CCRYGG	2 cut(s)	730, 1437
BtgZI	GCGATG	1 cut(s)	2605
BtsI	GCAGTG	4 cut(s)	569, 1944, 2100, 2424
BtsIMutI	CAGTG	7 cut(s)	148, 569, 1356, 1944, 1959, 2100, 2424
BveI	ACCTGC	3 cut(s)	367, 677, 718
Cac8I	GCNNGC	9 cut(s)	12, 121, 644, 1012, 1277, 2100, 2129, 2354, 2517
CaiI	CAGNNNCTG	1 cut(s)	254
Csp6I	GTAC	4 cut(s)	139, 1581, 2206, 2251
CviQI	GTAC	4 cut(s)	139, 1581, 2206, 2251
DdeI	CTNAG	9 cut(s)	180, 207, 220, 632, 867, 1587, 1893, 2463, 2484
Eam1104I	CTCTTC	2 cut(s)	2271, 2564
EarI	CTCTTC	2 cut(s)	2271, 2564
Ecl136II	GAGCTC	1 cut(s)	1517
Eco130I	CCWWGG	4 cut(s)	770, 1263, 1437, 2201
Eco147I	AGGCCT	1 cut(s)	1451
Eco24I	GRGCYC	3 cut(s)	82, 1519, 2614
Eco31I	GGTCTC	1 cut(s)	1165
Eco47I	GGWCC	9 cut(s)	479, 548, 809, 1544, 1591, 2017, 2169, 2503, 2868
Eco53kI	GAGCTC	1 cut(s)	1517
Eco57I	CTGAAG	4 cut(s)	1533, 2097, 2109, 2643
Eco72I	CACGTG	2 cut(s)	830, 1859
Eco81I	CCTNAGG	2 cut(s)	1587, 2463
Eco91I	GGTNACC	2 cut(s)	18, 774
EcoICRI	GAGCTC	1 cut(s)	1517
EcoO109I	RGGNCCY	2 cut(s)	1544, 2503
EcoO65I	GGTNACC	2 cut(s)	18, 774
EcoRI	GAATTC	1 cut(s)	2536
EcoRII	CCWGG	9 cut(s)	199, 253, 535, 544, 553, 874, 976, 1132, 2171
EcoT14I	CCWWGG	4 cut(s)	770, 1263, 1437, 2201
EcoT38I	GRGCYC	3 cut(s)	82, 1519, 2614
ErhI	CCWWGG	4 cut(s)	770, 1263, 1437, 2201
FalI	AAGNNNNNCTT	2 cut(s)	2424, 2456
FaqI	GGGAC	6 cut(s)	217, 261, 492, 534, 733, 795
FauI	CCCGC	2 cut(s)	112, 2514
FbaI	TGATCA	1 cut(s)	2809
FblI	GTMKAC	1 cut(s)	1086
FriOI	GRGCYC	3 cut(s)	82, 1519, 2614
FspBI	CTAG	5 cut(s)	195, 402, 639, 771, 2115
GsuI	CTGGAG	2 cut(s)	1392, 1533
HaeIII	GGCC	3 cut(s)	1451, 1690, 1808
HapII	CCGG	2 cut(s)	807, 1200
HincII	GTYRAC	2 cut(s)	2631, 2691
HindII	GTYRAC	2 cut(s)	2631, 2691
HindIII	AAGCTT	1 cut(s)	2433
HpaII	CCGG	2 cut(s)	807, 1200
HphI	GGTGA	8 cut(s)	60, 348, 768, 1121, 1201, 1334, 1524, 2188
Hpy166II	GTNNAC	6 cut(s)	68, 1087, 1583, 2597, 2631, 2691
Hpy188III	TCNNGA	8 cut(s)	1200, 1343, 1430, 1512, 1542, 1566, 2030, 2135
Hpy8I	GTNNAC	6 cut(s)	68, 1087, 1583, 2597, 2631, 2691
HpyCH4III	ACNGT	9 cut(s)	129, 143, 901, 1189, 1459, 1973, 2155, 2674, 2900
HpyCH4IV	ACGT	4 cut(s)	434, 829, 1858, 2701
HpyF3I	CTNAG	9 cut(s)	180, 207, 220, 632, 867, 1587, 1893, 2463, 2484
HpySE526I	ACGT	4 cut(s)	434, 829, 1858, 2701
Kpn2I	TCCGGA	1 cut(s)	1199
Ksp22I	TGATCA	1 cut(s)	2809
LguI	GCTCTTC	1 cut(s)	2564
LmnI	GCTCC	9 cut(s)	85, 106, 472, 697, 1147, 1393, 1411, 1514, 1522
MaeI	CTAG	5 cut(s)	195, 402, 639, 771, 2115
MaeII	ACGT	4 cut(s)	434, 829, 1858, 2701
MfeI	CAATTG	1 cut(s)	1043
MflI	RGATCY	3 cut(s)	1281, 2260, 2458
MhlI	GDGCHC	9 cut(s)	82, 125, 694, 1408, 1519, 1845, 2599, 2614, 2893
MluCI	AATT	9 cut(s)	307, 965, 1043, 1192, 1715, 2011, 2158, 2451, 2536
MlyI	GAGTC	5 cut(s)	517, 744, 1355, 1649, 2061
MmeI	TCCRAC	2 cut(s)	116, 2475
MroI	TCCGGA	1 cut(s)	1199
MslI	CAYNNNNRTG	3 cut(s)	887, 2576, 2769
MspA1I	CMGCKG	2 cut(s)	331, 1275
MspI	CCGG	2 cut(s)	807, 1200
MunI	CAATTG	1 cut(s)	1043
Mva1269I	GAATGC	2 cut(s)	388, 537
MvaI	CCWGG	9 cut(s)	201, 255, 537, 546, 555, 876, 978, 1134, 2173
MvnI	CGCG	1 cut(s)	2565
NciI	CCSGG	1 cut(s)	807
NcoI	CCATGG	1 cut(s)	1437
NmeAIII	GCCGAG	1 cut(s)	2800
NmuCI	GTSAC	4 cut(s)	774, 880, 1102, 1322
NspI	RCATGY	3 cut(s)	1001, 1651, 2131
OliI	CACNNNNGTG	1 cut(s)	887
PaeI	GCATGC	1 cut(s)	2131
PaqCI	CACCTGC	2 cut(s)	367, 677
PceI	AGGCCT	1 cut(s)	1451
PciI	ACATGT	1 cut(s)	1647
PciSI	GCTCTTC	1 cut(s)	2564
PctI	GAATGC	2 cut(s)	388, 537
PfeI	GAWTC	7 cut(s)	614, 863, 1112, 1382, 1508, 1667, 2480
PflMI	CCANNNNNTGG	1 cut(s)	254
PfoI	TCCNGGA	1 cut(s)	1132
PleI	GAGTC	5 cut(s)	517, 743, 1354, 1649, 2060
PmaCI	CACGTG	2 cut(s)	830, 1859
PmlI	CACGTG	2 cut(s)	830, 1859
PpsI	GAGTC	5 cut(s)	517, 743, 1354, 1649, 2060
Ppu21I	YACGTR	2 cut(s)	830, 1859
PpuMI	RGGWCCY	2 cut(s)	1544, 2503
PscI	ACATGT	1 cut(s)	1647
PsiI	TTATAA	1 cut(s)	1095
Psp124BI	GAGCTC	1 cut(s)	1519
Psp1406I	AACGTT	1 cut(s)	2701
Psp5II	RGGWCCY	2 cut(s)	1544, 2503
Psp6I	CCWGG	9 cut(s)	199, 253, 535, 544, 553, 874, 976, 1132, 2171
PspCI	CACGTG	2 cut(s)	830, 1859
PspEI	GGTNACC	2 cut(s)	18, 774
PspGI	CCWGG	9 cut(s)	199, 253, 535, 544, 553, 874, 976, 1132, 2171
PspPPI	RGGWCCY	2 cut(s)	1544, 2503
PstI	CTGCAG	2 cut(s)	100, 673
PstNI	CAGNNNCTG	1 cut(s)	254
PsuI	RGATCY	3 cut(s)	1281, 2260, 2458
PvuII	CAGCTG	2 cut(s)	331, 1275
RsaI	GTAC	4 cut(s)	140, 1582, 2207, 2252
RsaNI	GTAC	4 cut(s)	139, 1581, 2206, 2251
RseI	CAYNNNNRTG	3 cut(s)	887, 2576, 2769
SacI	GAGCTC	1 cut(s)	1519
SapI	GCTCTTC	1 cut(s)	2564
SchI	GAGTC	5 cut(s)	517, 744, 1355, 1649, 2061
SduI	GDGCHC	9 cut(s)	82, 125, 694, 1408, 1519, 1845, 2599, 2614, 2893
SfcI	CTRYAG	4 cut(s)	96, 624, 669, 2634
SinI	GGWCC	9 cut(s)	479, 548, 809, 1544, 1591, 2017, 2169, 2503, 2868
SmiMI	CAYNNNNRTG	3 cut(s)	887, 2576, 2769
SmlI	CTYRAG	3 cut(s)	48, 1004, 1564
SmoI	CTYRAG	3 cut(s)	48, 1004, 1564
SpeI	ACTAGT	2 cut(s)	194, 2114
SphI	GCATGC	1 cut(s)	2131
Sse9I	AATT	9 cut(s)	307, 965, 1043, 1192, 1715, 2011, 2158, 2451, 2536
SseBI	AGGCCT	1 cut(s)	1451
SsiI	CCGC	8 cut(s)	23, 119, 2020, 2191, 2356, 2507, 2563, 2788
SspMI	CTAG	5 cut(s)	195, 402, 639, 771, 2115
SstI	GAGCTC	1 cut(s)	1519
StuI	AGGCCT	1 cut(s)	1451
StyI	CCWWGG	4 cut(s)	770, 1263, 1437, 2201
TaaI	ACNGT	9 cut(s)	129, 143, 901, 1189, 1459, 1973, 2155, 2674, 2900
TaiI	ACGT	4 cut(s)	437, 832, 1861, 2704
TaqI	TCGA	2 cut(s)	1482, 2029
TasI	AATT	9 cut(s)	307, 965, 1043, 1192, 1715, 2011, 2158, 2451, 2536
TatI	WGTACW	2 cut(s)	1580, 2250
TfiI	GAWTC	7 cut(s)	614, 863, 1112, 1382, 1508, 1667, 2480
TscAI	CASTG	7 cut(s)	148, 576, 1356, 1944, 1966, 2100, 2424
TseFI	GTSAC	4 cut(s)	774, 880, 1102, 1322
Tsp45I	GTSAC	4 cut(s)	774, 880, 1102, 1322
TspDTI	ATGAA	8 cut(s)	362, 480, 939, 1305, 1518, 1947, 2061, 2529
TspGWI	ACGGA	1 cut(s)	747
TspRI	CASTG	7 cut(s)	148, 576, 1356, 1944, 1966, 2100, 2424
Van91I	CCANNNNNTGG	1 cut(s)	254
VneI	GTGCAC	1 cut(s)	2595
VpaK11BI	GGWCC	9 cut(s)	479, 548, 809, 1544, 1591, 2017, 2169, 2503, 2868
XapI	RAATTY	3 cut(s)	1192, 2011, 2536
XceI	RCATGY	3 cut(s)	1001, 1651, 2131
XcmI	CCANNNNNNNNNTGG	2 cut(s)	489, 1758
XmaJI	CCTAGG	1 cut(s)	770
XmiI	GTMKAC	1 cut(s)	1086
XspI	CTAG	5 cut(s)	195, 402, 639, 771, 2115

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.