pre-mRNA-processing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G19840 |
| fragaria_vesca | FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 FvH4_4g36700 |
| malus_domestica | MD13G1007900.v1.1 MD13G1008000.v1.1 MD16G1000200.v1.1 |
| prunus_persica | Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 Prupe.1G345100_v2.0.a1 |
| pyrus_communis | pycom13g00650 pycom16g00500 pycom16g00510 pycom16g00520 |
| rosa_chinensis | RchiOBHm_Chr4g0446421 |
| rosa_laevigata | RLG00000005662 |
| rosa_multiflora | Rmu_co8175444.1_g000001 Rmu_sc0008360.1_g000005 Rmu_sc0018208.1_g000001 Rmu_sc0025430.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00386860 |
| rosa_rugosa | Rorug04G0371200 |
| rosa_samantha | Rh4AG432800 Rh4BG441900 Rh4CG459300 Rh4DG440700 |
| rosa_wichuraiana | Rw4G036970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 106 |
| AciI | CCGC | 1 cut(s) | 106 |
| AcsI | RAATTY | 1 cut(s) | 193 |
| AfaI | GTAC | 1 cut(s) | 181 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 168 |
| AgsI | TTSAA | 1 cut(s) | 166 |
| Alw21I | GWGCWC | 1 cut(s) | 64 |
| Alw26I | GTCTC | 1 cut(s) | 80 |
| Alw44I | GTGCAC | 1 cut(s) | 60 |
| ApaLI | GTGCAC | 1 cut(s) | 60 |
| ApoI | RAATTY | 1 cut(s) | 193 |
| BaeGI | GKGCMC | 1 cut(s) | 64 |
| Bbv12I | GWGCWC | 1 cut(s) | 64 |
| BccI | CCATC | 2 cut(s) | 166, 191 |
| BcoDI | GTCTC | 1 cut(s) | 80 |
| BfaI | CTAG | 1 cut(s) | 72 |
| BpuEI | CTTGAG | 1 cut(s) | 62 |
| BsaAI | YACGTR | 1 cut(s) | 179 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 168 |
| Bse3DI | GCAATG | 1 cut(s) | 65 |
| BseGI | GGATG | 1 cut(s) | 177 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 168 |
| BseMI | GCAATG | 1 cut(s) | 65 |
| BseSI | GKGCMC | 1 cut(s) | 64 |
| BsiHKAI | GWGCWC | 1 cut(s) | 64 |
| BslFI | GGGAC | 1 cut(s) | 170 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 168 |
| BsmAI | GTCTC | 1 cut(s) | 80 |
| BsmFI | GGGAC | 1 cut(s) | 170 |
| Bsp1286I | GDGCHC | 1 cut(s) | 64 |
| BspACI | CCGC | 1 cut(s) | 106 |
| BsrBI | CCGCTC | 1 cut(s) | 106 |
| BsrDI | GCAATG | 1 cut(s) | 65 |
| BstBAI | YACGTR | 1 cut(s) | 179 |
| BstF5I | GGATG | 1 cut(s) | 177 |
| BstMAI | GTCTC | 1 cut(s) | 80 |
| BstSLI | GKGCMC | 1 cut(s) | 64 |
| BtsCI | GGATG | 1 cut(s) | 177 |
| BtsI | GCAGTG | 1 cut(s) | 141 |
| BtsIMutI | CAGTG | 1 cut(s) | 141 |
| Csp6I | GTAC | 1 cut(s) | 180 |
| CviQI | GTAC | 1 cut(s) | 180 |
| Eco32I | GATATC | 1 cut(s) | 25 |
| EcoRV | GATATC | 1 cut(s) | 25 |
| FaiI | YATR | 4 cut(s) | 6, 204, 206, 208 |
| FaqI | GGGAC | 1 cut(s) | 170 |
| FokI | GGATG | 1 cut(s) | 184 |
| FspBI | CTAG | 1 cut(s) | 72 |
| HinfI | GANTC | 1 cut(s) | 158 |
| Hpy166II | GTNNAC | 1 cut(s) | 62 |
| Hpy188I | TCNGA | 2 cut(s) | 19, 37 |
| Hpy188III | TCNNGA | 2 cut(s) | 151, 189 |
| Hpy8I | GTNNAC | 1 cut(s) | 62 |
| HpyCH4IV | ACGT | 2 cut(s) | 90, 178 |
| HpyCH4V | TGCA | 1 cut(s) | 62 |
| HpySE526I | ACGT | 2 cut(s) | 90, 178 |
| LmnI | GCTCC | 1 cut(s) | 103 |
| LpnPI | CCDG | 3 cut(s) | 67, 136, 174 |
| MaeI | CTAG | 1 cut(s) | 72 |
| MaeII | ACGT | 2 cut(s) | 90, 178 |
| MaeIII | GTNAC | 1 cut(s) | 136 |
| MbiI | CCGCTC | 1 cut(s) | 106 |
| MboII | GAAGA | 1 cut(s) | 50 |
| MhlI | GDGCHC | 1 cut(s) | 64 |
| MluCI | AATT | 2 cut(s) | 166, 193 |
| MlyI | GAGTC | 1 cut(s) | 152 |
| MnlI | CCTC | 4 cut(s) | 13, 38, 39, 147 |
| NmuCI | GTSAC | 1 cut(s) | 136 |
| PleI | GAGTC | 1 cut(s) | 152 |
| PpsI | GAGTC | 1 cut(s) | 152 |
| Ppu21I | YACGTR | 1 cut(s) | 179 |
| RsaI | GTAC | 1 cut(s) | 181 |
| RsaNI | GTAC | 1 cut(s) | 180 |
| SchI | GAGTC | 1 cut(s) | 152 |
| SduI | GDGCHC | 1 cut(s) | 64 |
| SetI | ASST | 3 cut(s) | 56, 93, 181 |
| SgeI | CNNG | 8 cut(s) | 57, 66, 84, 91, 163, 175, 189, 201 |
| SmlI | CTYRAG | 1 cut(s) | 77 |
| SmoI | CTYRAG | 1 cut(s) | 77 |
| Sse9I | AATT | 2 cut(s) | 166, 193 |
| SsiI | CCGC | 1 cut(s) | 106 |
| SspMI | CTAG | 1 cut(s) | 72 |
| TaiI | ACGT | 2 cut(s) | 93, 181 |
| TaqII | GACCGA | 1 cut(s) | 108 |
| TasI | AATT | 2 cut(s) | 166, 193 |
| TscAI | CASTG | 1 cut(s) | 141 |
| TseFI | GTSAC | 1 cut(s) | 136 |
| Tsp45I | GTSAC | 1 cut(s) | 136 |
| TspRI | CASTG | 1 cut(s) | 141 |
| VneI | GTGCAC | 1 cut(s) | 60 |
| XapI | RAATTY | 1 cut(s) | 193 |
| XspI | CTAG | 1 cut(s) | 72 |