Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0010393

Physical Location & Seq

Genomic Coordinates Forward (+)

33547147 .. 33554450

Gene Structure 7304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g36780.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3009 bp

ATGTGTGGATTCCTTAAGCAAGGAGTGATAGCGTTCAACTCTCTCCTTCTCCTCAGACGTAACCCTTTCTCTCTGCCGCCGCCGTCACACCTCACTCGCAACCGCTCCCTCTCCGCCATCGCAACGACGTCGTTTCATCCCAAGATGCCAGGACTCGAATCTCAGGCAGTCGGAGTCGAGTGGCCGGCGAACCGCGTGCGTGACACTTTCTTCAGCTACTTCATGGAGAAGGAGCACAAGAACTATAAGTCCAGCCCCGTCGTCCCTCACAACGATCCAACTCTTCTCTTTGCAAACGCTGGAATGAACCAGTTTAAGCCCATTTTTCTGGGAACGGCGGACCCGAACACCGATTTAAGCAAGCTGACGAGAGCATGCAACACACAGAAATGTATTAGGGCAGGTGGGAAGCATAATGATCTCGAAGACGTGGGGAAAGACACCTACCATCACACTTTTTTCGAGATGCTGGGGAATTGGTCGTTCGGGGACTATTTCAAGAGTGAGGCCATTGAATGGGCTTGGGTGCTTCTCACTCAGGTTTATAAGCTGCCAGAGGATCGATTTTATGCCACTTATTTCGGTGGTGATGAGAAGCTGGGTCTTGCTCCTGATAATGAAGCTAGAGATTTATGGCTTAAGTTTCTACCACCTGGACGTGTACTGCCTTTTGGCTGTAAGGATAACTTTTGGGAGATGGGCGATACTGGTCCTTGCGGCCCTTGCACTGAGATCCATTATGATAGAGTTGGTAATCGGGATGCTGCATCATTAGTCAACAATGATGACCCTACCTGCCTTGAGATCTGGAACCTTGTCTTTATTCAGTTCAATAGGGAAAGTGATGGCTCTCTCAAACCATTGCCTGCTAAGCATGTTGACACTGGGATGGGATTTGAAAGATTGACATCTGTACTTCAGAACAAGATGAGCAATTATGACACTGATGTGTTCATGCCTATATTTGATGCTATTCAGCAGACTACGGGGGCTCGCCCATATTCTGGGAAAGTTGGAGAGGATGATGTAGACAAAGTTGACATGGCATACAGGGTTGTTGCAGATCATATAAGAACTCTTTCATTTGCCATTGCTGATGGGTCCCGTCCAGGCAATGACGGACGTGAATATGTTCTGAGACGTATCCTTCGTCGAGCTGTTCGATATGGAAGAGAAGTCCTAAAAGCACAAGAAGGATTTTTCAATGGGCTTGTACCTGTGTTGGTAACACTGATGGGTGATGTATTCCCGGAACTAAAAGGAAATAAAGAACGCATTAGAGACATAATCAAAGAGGAAGAGGAAGCATTTGGCAAGACTCTACTTAAGGGAATAGAAAAATTCAAAAAGGCTGCTCAAGATGTTCAAGGCAAAAAATTTAGCGGGCAGGAAGCTTTCGTCTTGTGGGACACCTTCGGGTTCCCTTTGGATTTGACTCAGTTGATGGCAGAGGAAAATGGATTAGAAGTTGATGTTGAGGGTTTCAATTTCGCTATGGATGAGGCTCGAGAAAGATCAAGGAATGCCCAAAATAAGGAAGAAGGTGGTGCCATTGTTTTGAATGCTGATGCTACTGCTTCATTGCACAAGTGTGGAGTTGCTGCAACAGACGACAGCTTCAAATATATATGGTTTCAGGACCATGAAAGCGTGATTAAAGCAATTTACACTGGTTCAGAGTTCATGGATAGTGTTGCTGCTGGCAGTTTAGTTGGTGTTATTTTGGAGTCTACGAGTTTCTATGCTGAGCAAGGTGGACAGATTTTTGACACTGGATCACTACAAGGAGGCTTTGGCTCATTTCAAGTCCGCAATGTTCAAATTTTTGGAGGTTTTGTTGTCCACATTGGCTCCTTTTCTGGAGAGCATGGCAAACTCTCTGTGGGTGAAAAAGTGGTCTGTAAGGTTGACTATAAAAGGCGTACACTCATTGCGCCTAACCATACCTGCACACATATGTTGAACTTTGCTCTGAAGGAAGTTCTTGGCCCTGATGTTGACCAGAAGGGTTCCATTGTTCTTCCTGAAAAATTGAGATTTGATTTTTCTCATGGTAAGCCGGTGGAACCTGAACAGTTGAGAAGAATCGAATCAATCGTGAATGAGCAAATAAAAGCTGAGTTAGATGTGTCTGTTAAGGAGGTAGCCCTGGATGATGCTCGGGGCATCAAAGGTTTAAGGGCTGTATTTGGAGAGGTCTATCCTGACCCAGTGAGAGTTGTGGCTGTTGGGCGAAAGGTTGAGGACCTTCTGGCTGACCCTAAAAACGAGGAATGGTTGTCAATATCGACAGAATTTTGTGGAGGAACCCATTTAACAAATACACGTGAAGCTGAGGCATTTGCCCTTTTATCGGAAGAGGGAACTGCTAAGGGAATCCGAAGGATAACTGCTGTCACAACCAATGCTGCTTTTGATGCAATTAAATTGGCAGATTCACTTGAGCAGGAAGTAACTGAAGCTTCCAAGGCTGAAGAGAGCTTGCTGGAGAAGAAGATAGCTTCCTTTAAATCTCGCATAGACGCAGCACAAATTCCAGCGGCTAAGAAAGCTGATATAAGGGACAAGATTGTTCAACTTCAGAATAAAGTGAGAAAGGCACAGAAGAAGATTGCAGAACAAAATTTACAAAAAGCTGTCAAGGTTGCAAGGGAGATGGCGGAACTTGCTGCATCTGATGGGAAGGCTTTCTGTGTATCCCATGTTGATGTTGGTTTAGATATCGCTGCAGTCCGCGAAGCAGTGTGTAAAGTCATAGAGAAGGGAATGCCTGCGATAGTTTTTAGCACTGATGAAACTACAAATAAGGCCGTGGCATGTGCTGGAGTACCAGGAGACAAAGGCAAGCAATTGGAGGTGTCACAGTGGTTGATTGCAGCTTTGGGTCCCCTGAAAGGAAGGTGTGGTAAAGGAAAAGGTGGCCTTGCTACTGGCCAGGGAACAGATGCATCTCGTCTGAAGGAGTCAATAGACGTGGCAACCACTTTTGCGCAGATGAAATTGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000049 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004812 GO:0004813 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006412 GO:0006418 GO:0006419 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016070 GO:0016597 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0031406 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0036094 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:0140101 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

DHHA1 tRNA-synt_2c tRNA_SAD

Protein Analysis

1003

Amino Acids

110.56

Weight (kDa)

5.94

Isoelectric Point (pI)

33.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2c	PF01411	66 - 640	3.7e-217	tRNA synthetases class II (A)
tRNA_SAD	PF07973	738 - 796	3.9e-12	Threonyl and Alanyl tRNA synthetase second additional domain
DHHA1	PF02272	896 - 997	1.6e-06	DHHA1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010393)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50200 AT1G50200
fragaria_vesca	FvH4_4g36780 FvH4_4g36780
malus_domestica	MD13G1007000.v1.1 MD16G1000800.v1.1
prunus_persica	Prupe.1G345900_v2.0.a1
pyrus_communis	pycom13g00590 pycom16g00460
rosa_chinensis	RchiOBHm_Chr4g0446511
rosa_laevigata	RLG00000005653
rosa_multiflora	Rmu_co8401425.1_g000001 Rmu_sc0005526.1_g000002 Rmu_sc0009884.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386930
rosa_rugosa	Rorug04G0372100 Rorug04G0372200
rosa_samantha	Rh4BG442800 Rh4CG460300 Rh4DG441500
rosa_wichuraiana	Rw4G037060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	546
AarI	CACCTGC	1 cut(s)	392
AatII	GACGTC	1 cut(s)	131
Acc16I	TGCGCA	1 cut(s)	2991
Acc36I	ACCTGC	3 cut(s)	392, 803, 1955
AccB1I	GGYRCC	1 cut(s)	1547
AccB7I	CCANNNNNTGG	2 cut(s)	516, 1004
AccBSI	CCGCTC	1 cut(s)	105
AccI	GTMKAC	2 cut(s)	1029, 1730
AccII	CGCG	2 cut(s)	195, 2736
AclWI	GGATC	4 cut(s)	269, 567, 727, 1783
AcoI	YGGCCR	2 cut(s)	182, 2932
AcsI	RAATTY	6 cut(s)	1340, 1376, 1821, 2294, 2532, 2623
AcuI	CTGAAG	7 cut(s)	196, 902, 1994, 2478, 2493, 2564, 2978
AcvI	CACGTG	1 cut(s)	2327
AcyI	GRCGYC	1 cut(s)	128
AfaI	GTAC	5 cut(s)	663, 915, 1215, 1924, 2829
AfiI	CCNNNNNNNGG	5 cut(s)	516, 1004, 1534, 2353, 2894
AflII	CTTAAG	3 cut(s)	14, 638, 1325
AflIII	ACRYGT	2 cut(s)	658, 2324
AjiI	CACGTC	4 cut(s)	430, 659, 1124, 2974
AjnI	CCWGG	6 cut(s)	148, 652, 1108, 2148, 2830, 2934
AleI	CACNNNNGTG	2 cut(s)	947, 1590
AloI	GAACNNNNNNTCC	2 cut(s)	233, 265
Alw21I	GWGCWC	1 cut(s)	237
Alw26I	GTCTC	3 cut(s)	1132, 1275, 2829
AlwI	GGATC	4 cut(s)	269, 567, 727, 1783
Ama87I	CYCGRG	2 cut(s)	1506, 2160
AoxI	GGCC	7 cut(s)	182, 507, 718, 1987, 2808, 2920, 2932
ApoI	RAATTY	6 cut(s)	1340, 1376, 1821, 2294, 2532, 2623
ArsI	GACNNNNNNTTYG	2 cut(s)	1131, 1163
Asp700I	GAANNNNTTC	3 cut(s)	1078, 1131, 2687
AspLEI	GCGC	2 cut(s)	1936, 2992
AspS9I	GGNCC	8 cut(s)	340, 710, 719, 1101, 1639, 1988, 2245, 2885
AsuC2I	CCSGG	1 cut(s)	1250
AsuHPI	GGTGA	3 cut(s)	599, 1250, 1898
AvaI	CYCGRG	2 cut(s)	1506, 2160
AvaII	GGWCC	6 cut(s)	340, 710, 1101, 1639, 2245, 2885
BalI	TGGCCA	1 cut(s)	2934
BanI	GGYRCC	1 cut(s)	1547
BanII	GRGCYC	1 cut(s)	994
BbrPI	CACGTG	1 cut(s)	2327
BbsI	GAAGAC	1 cut(s)	432
Bbv12I	GWGCWC	1 cut(s)	237
BbvCI	CCTCAGC	1 cut(s)	2334
BceAI	ACGGC	3 cut(s)	67, 351, 2795
BcgI	CGANNNNNNTGC	4 cut(s)	111, 145, 178, 212
BciT130I	CCWGG	6 cut(s)	150, 654, 1110, 2150, 2832, 2936
BciVI	GTATCC	2 cut(s)	1154, 2707
BcnI	CCSGG	1 cut(s)	1250
BcoDI	GTCTC	3 cut(s)	1132, 1275, 2829
BfaI	CTAG	1 cut(s)	624
BfmI	CTRYAG	1 cut(s)	2727
BfrI	CTTAAG	3 cut(s)	14, 638, 1325
BfuAI	ACCTGC	3 cut(s)	392, 803, 1955
BfuI	GTATCC	2 cut(s)	1154, 2707
BglII	AGATCT	1 cut(s)	804
BlpI	GCTNAGC	2 cut(s)	870, 1746
Bme1390I	CCNGG	7 cut(s)	150, 654, 1110, 1250, 2150, 2832, 2936
Bme18I	GGWCC	6 cut(s)	340, 710, 1101, 1639, 2245, 2885
BmeT110I	CYCGRG	2 cut(s)	1506, 2160
BmgBI	CACGTC	4 cut(s)	430, 659, 1124, 2974
BmgT120I	GGNCC	8 cut(s)	340, 710, 719, 1101, 1639, 1988, 2245, 2885
BmrFI	CCNGG	7 cut(s)	150, 654, 1110, 1250, 2150, 2832, 2936
BmrI	ACTGGG	2 cut(s)	894, 2204
BmuI	ACTGGG	2 cut(s)	894, 2204
BpiI	GAAGAC	1 cut(s)	432
BpmI	CTGGAG	3 cut(s)	1881, 2507, 2844
Bpu10I	CCTNAGC	2 cut(s)	2334, 2370
Bpu1102I	GCTNAGC	2 cut(s)	870, 1746
BpuEI	CTTGAG	3 cut(s)	821, 1341, 2462
BpuMI	CCSGG	1 cut(s)	1250
Bsa29I	ATCGAT	1 cut(s)	562
BsaAI	YACGTR	1 cut(s)	2327
BsaBI	GATNNNNATC	1 cut(s)	907
BsaHI	GRCGYC	1 cut(s)	128
BsaJI	CCNNGG	4 cut(s)	2148, 2466, 2811, 2935
BsaXI	ACNNNNNCTCC	4 cut(s)	1821, 1835, 1851, 1865
Bsc4I	CCNNNNNNNGG	5 cut(s)	516, 1004, 1534, 2353, 2894
Bse118I	RCCGGY	2 cut(s)	184, 2059
Bse1I	ACTGG	7 cut(s)	310, 712, 889, 1675, 1777, 2210, 2935
Bse3DI	GCAATG	6 cut(s)	860, 1089, 1120, 1580, 1819, 1929
Bse8I	GATNNNNATC	1 cut(s)	907
BseBI	CCWGG	6 cut(s)	150, 654, 1110, 2150, 2832, 2936
BseCI	ATCGAT	1 cut(s)	562
BseDI	CCNNGG	4 cut(s)	2148, 2466, 2811, 2935
BseGI	GGATG	6 cut(s)	136, 766, 894, 1027, 1504, 2158
BseJI	GATNNNNATC	1 cut(s)	907
BseLI	CCNNNNNNNGG	5 cut(s)	516, 1004, 1534, 2353, 2894
BseMI	GCAATG	6 cut(s)	860, 1089, 1120, 1580, 1819, 1929
BseMII	CTCAG	9 cut(s)	67, 176, 551, 720, 1127, 1451, 1737, 2109, 2325
BseNI	ACTGG	7 cut(s)	310, 712, 889, 1675, 1777, 2210, 2935
BseRI	GAGGAG	1 cut(s)	41
BseYI	CCCAGC	2 cut(s)	469, 598
BsgI	GTGCAG	1 cut(s)	1933
Bsh1236I	CGCG	2 cut(s)	195, 2736
BshFI	GGCC	7 cut(s)	184, 509, 720, 1989, 2810, 2922, 2934
BshNI	GGYRCC	1 cut(s)	1547
BshVI	ATCGAT	1 cut(s)	562
BsiHKAI	GWGCWC	1 cut(s)	237
BsiHKCI	CYCGRG	2 cut(s)	1506, 2160
BsiSI	CCGG	3 cut(s)	185, 1250, 2060
BslFI	GGGAC	6 cut(s)	248, 503, 1087, 1421, 2576, 2871
BslI	CCNNNNNNNGG	5 cut(s)	516, 1004, 1534, 2353, 2894
BsmAI	GTCTC	3 cut(s)	1132, 1275, 2829
BsmBI	CGTCTC	1 cut(s)	1132
BsmFI	GGGAC	6 cut(s)	248, 503, 1087, 1421, 2576, 2871
BsmI	GAATGC	3 cut(s)	1528, 1567, 2772
BsnI	GGCC	7 cut(s)	184, 509, 720, 1989, 2810, 2922, 2934
BsoBI	CYCGRG	2 cut(s)	1506, 2160
Bsp1286I	GDGCHC	2 cut(s)	237, 994
Bsp143I	GATC	8 cut(s)	274, 418, 559, 732, 804, 1063, 1514, 1775
Bsp1720I	GCTNAGC	2 cut(s)	870, 1746
BspANI	GGCC	7 cut(s)	184, 509, 720, 1989, 2810, 2922, 2934
BspCNI	CTCAG	9 cut(s)	66, 175, 550, 721, 1128, 1450, 1738, 2110, 2326
BspDI	ATCGAT	1 cut(s)	562
BspFNI	CGCG	2 cut(s)	195, 2736
BspMAI	CTGCAG	1 cut(s)	2731
BspMI	ACCTGC	3 cut(s)	392, 803, 1955
BspPI	GGATC	4 cut(s)	269, 567, 727, 1783
BspT107I	GGYRCC	1 cut(s)	1547
BspTI	CTTAAG	3 cut(s)	14, 638, 1325
BsrBI	CCGCTC	1 cut(s)	105
BsrDI	GCAATG	6 cut(s)	860, 1089, 1120, 1580, 1819, 1929
BsrFI	RCCGGY	2 cut(s)	184, 2059
BsrI	ACTGG	7 cut(s)	310, 712, 889, 1675, 1777, 2210, 2935
BssAI	RCCGGY	2 cut(s)	184, 2059
BssECI	CCNNGG	4 cut(s)	2148, 2466, 2811, 2935
BssMI	GATC	8 cut(s)	274, 418, 559, 732, 804, 1063, 1514, 1775
BssNI	GRCGYC	1 cut(s)	128
BssT1I	CCWWGG	1 cut(s)	2466
Bst2UI	CCWGG	6 cut(s)	150, 654, 1110, 2150, 2832, 2936
Bst4CI	ACNGT	2 cut(s)	2076, 2865
Bst6I	CTCTTC	5 cut(s)	288, 1165, 1293, 2352, 2469
BstACI	GRCGYC	1 cut(s)	128
BstAFI	CTTAAG	3 cut(s)	14, 638, 1325
BstBAI	YACGTR	1 cut(s)	2327
BstDSI	CCRYGG	1 cut(s)	2811
BstF5I	GGATG	6 cut(s)	136, 766, 894, 1027, 1504, 2158
BstFNI	CGCG	2 cut(s)	195, 2736
BstHHI	GCGC	2 cut(s)	1936, 2992
BstKTI	GATC	8 cut(s)	277, 421, 562, 735, 807, 1066, 1517, 1778
BstMAI	GTCTC	3 cut(s)	1132, 1275, 2829
BstMBI	GATC	8 cut(s)	274, 418, 559, 732, 804, 1063, 1514, 1775
BstMWI	GCNNNNNNNGC	6 cut(s)	723, 871, 2417, 2468, 2549, 2666
BstNI	CCWGG	6 cut(s)	150, 654, 1110, 2150, 2832, 2936
BstNSI	RCATGY	3 cut(s)	378, 878, 2820
BstSCI	CCNGG	7 cut(s)	148, 652, 1108, 1248, 2148, 2830, 2934
BstSFI	CTRYAG	1 cut(s)	2727
BstUI	CGCG	2 cut(s)	195, 2736
BstV2I	GAAGAC	1 cut(s)	432
BstX2I	RGATCY	2 cut(s)	732, 804
BstXI	CCANNNNNNTGG	1 cut(s)	328
BstYI	RGATCY	2 cut(s)	732, 804
Bsu15I	ATCGAT	1 cut(s)	562
BsuI	GTATCC	2 cut(s)	1154, 2707
BsuRI	GGCC	7 cut(s)	184, 509, 720, 1989, 2810, 2922, 2934
BsuTUI	ATCGAT	1 cut(s)	562
BtgI	CCRYGG	1 cut(s)	2811
BtgZI	GCGATG	1 cut(s)	103
BtrI	CACGTC	4 cut(s)	430, 659, 1124, 2974
BtsCI	GGATG	6 cut(s)	136, 766, 894, 1027, 1504, 2158
BtsI	GCAGTG	1 cut(s)	2748
BveI	ACCTGC	3 cut(s)	392, 803, 1955
CfoI	GCGC	2 cut(s)	1936, 2992
Cfr10I	RCCGGY	2 cut(s)	184, 2059
Cfr13I	GGNCC	8 cut(s)	340, 710, 719, 1101, 1639, 1988, 2245, 2885
ClaI	ATCGAT	1 cut(s)	562
CseI	GACGC	1 cut(s)	2531
Csp6I	GTAC	5 cut(s)	662, 914, 1214, 1923, 2828
CspCI	CAANNNNNGTGG	2 cut(s)	2955, 2990
CviQI	GTAC	5 cut(s)	662, 914, 1214, 1923, 2828
DpnI	GATC	8 cut(s)	276, 420, 561, 734, 806, 1065, 1516, 1777
DpnII	GATC	8 cut(s)	274, 418, 559, 732, 804, 1063, 1514, 1775
DraI	TTTAAA	1 cut(s)	2509
EaeI	YGGCCR	2 cut(s)	182, 2932
Eam1104I	CTCTTC	5 cut(s)	288, 1165, 1293, 2352, 2469
EarI	CTCTTC	5 cut(s)	288, 1165, 1293, 2352, 2469
EciI	GGCGGA	3 cut(s)	103, 353, 2675
Eco130I	CCWWGG	1 cut(s)	2466
Eco24I	GRGCYC	1 cut(s)	994
Eco32I	GATATC	1 cut(s)	2722
Eco47I	GGWCC	6 cut(s)	340, 710, 1101, 1639, 2245, 2885
Eco57I	CTGAAG	7 cut(s)	196, 902, 1994, 2478, 2493, 2564, 2978
Eco72I	CACGTG	1 cut(s)	2327
Eco88I	CYCGRG	2 cut(s)	1506, 2160
EcoO109I	RGGNCCY	3 cut(s)	1101, 2245, 2885
EcoRII	CCWGG	6 cut(s)	148, 652, 1108, 2148, 2830, 2934
EcoRV	GATATC	1 cut(s)	2722
EcoT14I	CCWWGG	1 cut(s)	2466
EcoT22I	ATGCAT	1 cut(s)	2950
EcoT38I	GRGCYC	1 cut(s)	994
ErhI	CCWWGG	1 cut(s)	2466
Esp3I	CGTCTC	1 cut(s)	1132
FalI	AAGNNNNNCTT	4 cut(s)	671, 703, 2907, 2939
FaqI	GGGAC	6 cut(s)	248, 503, 1087, 1421, 2576, 2871
FauI	CCCGC	1 cut(s)	1376
FauNDI	CATATG	1 cut(s)	1956
FblI	GTMKAC	2 cut(s)	1029, 1730
FokI	GGATG	6 cut(s)	123, 773, 901, 1034, 1511, 2165
FriOI	GRGCYC	1 cut(s)	994
FspBI	CTAG	1 cut(s)	624
FspI	TGCGCA	1 cut(s)	2991
GlaI	GCGC	2 cut(s)	1935, 2991
GsaI	CCCAGC	2 cut(s)	473, 602
GsuI	CTGGAG	3 cut(s)	1881, 2507, 2844
HaeIII	GGCC	7 cut(s)	184, 509, 720, 1989, 2810, 2922, 2934
HapII	CCGG	3 cut(s)	185, 1250, 2060
HgaI	GACGC	1 cut(s)	2531
HhaI	GCGC	2 cut(s)	1936, 2992
Hin1I	GRCGYC	1 cut(s)	128
Hin6I	GCGC	2 cut(s)	1934, 2990
HinP1I	GCGC	2 cut(s)	1934, 2990
HincII	GTYRAC	5 cut(s)	778, 880, 1039, 1909, 1999
HindII	GTYRAC	5 cut(s)	778, 880, 1039, 1909, 1999
HindIII	AAGCTT	2 cut(s)	1392, 2460
HpaII	CCGG	3 cut(s)	185, 1250, 2060
HphI	GGTGA	3 cut(s)	599, 1250, 1898
Hpy99I	CGWCG	4 cut(s)	130, 133, 263, 1155
HpyCH4III	ACNGT	2 cut(s)	2076, 2865
HpyCH4IV	ACGT	8 cut(s)	58, 128, 429, 658, 1123, 1141, 2326, 2973
HpyF10VI	GCNNNNNNNGC	6 cut(s)	723, 871, 2417, 2468, 2549, 2666
HpySE526I	ACGT	8 cut(s)	58, 128, 429, 658, 1123, 1141, 2326, 2973
Hsp92I	GRCGYC	1 cut(s)	128
HspAI	GCGC	2 cut(s)	1934, 2990
KflI	GGGWCCC	2 cut(s)	1101, 2885
KroI	GCCGGC	1 cut(s)	184
KroNI	GCCGGC	1 cut(s)	186
Kzo9I	GATC	8 cut(s)	274, 418, 559, 732, 804, 1063, 1514, 1775
LmnI	GCTCC	4 cut(s)	110, 232, 613, 1856
MaeI	CTAG	1 cut(s)	624
MaeII	ACGT	8 cut(s)	58, 128, 429, 658, 1123, 1141, 2326, 2973
MaeIII	GTNAC	7 cut(s)	59, 84, 200, 1225, 2395, 2452, 2859
MalI	GATC	8 cut(s)	276, 420, 561, 734, 806, 1065, 1516, 1777
MbiI	CCGCTC	1 cut(s)	105
MboI	GATC	8 cut(s)	274, 418, 559, 732, 804, 1063, 1514, 1775
MfeI	CAATTG	1 cut(s)	2849
MflI	RGATCY	2 cut(s)	732, 804
MhlI	GDGCHC	2 cut(s)	237, 994
MlsI	TGGCCA	1 cut(s)	2934
MluNI	TGGCCA	1 cut(s)	2934
MlyI	GAGTC	6 cut(s)	147, 183, 1312, 1429, 1736, 2972
MmeI	TCCRAC	3 cut(s)	151, 302, 994
Mox20I	TGGCCA	1 cut(s)	2934
Mph1103I	ATGCAT	1 cut(s)	2950
MroNI	GCCGGC	1 cut(s)	184
MroXI	GAANNNNTTC	3 cut(s)	1078, 1131, 2687
MscI	TGGCCA	1 cut(s)	2934
MslI	CAYNNNNRTG	6 cut(s)	388, 887, 947, 1590, 1955, 2706
Msp20I	TGGCCA	1 cut(s)	2934
MspA1I	CMGCKG	1 cut(s)	2540
MspCI	CTTAAG	3 cut(s)	14, 638, 1325
MspI	CCGG	3 cut(s)	185, 1250, 2060
MspR9I	CCNGG	7 cut(s)	150, 654, 1110, 1250, 2150, 2832, 2936
MunI	CAATTG	1 cut(s)	2849
Mva1269I	GAATGC	3 cut(s)	1528, 1567, 2772
MvaI	CCWGG	6 cut(s)	150, 654, 1110, 2150, 2832, 2936
MvnI	CGCG	2 cut(s)	195, 2736
MwoI	GCNNNNNNNGC	6 cut(s)	723, 871, 2417, 2468, 2549, 2666
NaeI	GCCGGC	1 cut(s)	186
NciI	CCSGG	1 cut(s)	1250
NdeI	CATATG	1 cut(s)	1956
NdeII	GATC	8 cut(s)	274, 418, 559, 732, 804, 1063, 1514, 1775
NgoMIV	GCCGGC	1 cut(s)	184
NmuCI	GTSAC	4 cut(s)	84, 200, 2395, 2859
NsbI	TGCGCA	1 cut(s)	2991
NsiI	ATGCAT	1 cut(s)	2950
NspI	RCATGY	3 cut(s)	378, 878, 2820
OliI	CACNNNNGTG	2 cut(s)	947, 1590
PaeI	GCATGC	1 cut(s)	378
PaeR7I	CTCGAG	1 cut(s)	1506
PaqCI	CACCTGC	1 cut(s)	392
PcsI	WCGNNNNNNNCGW	4 cut(s)	341, 1147, 1159, 2094
PctI	GAATGC	3 cut(s)	1528, 1567, 2772
PdiI	GCCGGC	1 cut(s)	186
PdmI	GAANNNNTTC	3 cut(s)	1078, 1131, 2687
PfeI	GAWTC	6 cut(s)	9, 158, 2085, 2090, 2376, 2435
PflMI	CCANNNNNTGG	2 cut(s)	516, 1004
PfoI	TCCNGGA	1 cut(s)	1248
PleI	GAGTC	6 cut(s)	147, 182, 1312, 1429, 1735, 2971
PmaCI	CACGTG	1 cut(s)	2327
PmlI	CACGTG	1 cut(s)	2327
PpsI	GAGTC	6 cut(s)	147, 182, 1312, 1429, 1735, 2971
Ppu21I	YACGTR	1 cut(s)	2327
PpuMI	RGGWCCY	3 cut(s)	1101, 2245, 2885
PsiI	TTATAA	1 cut(s)	546
Psp5II	RGGWCCY	3 cut(s)	1101, 2245, 2885
Psp6I	CCWGG	6 cut(s)	148, 652, 1108, 2148, 2830, 2934
PspCI	CACGTG	1 cut(s)	2327
PspFI	CCCAGC	2 cut(s)	469, 598
PspGI	CCWGG	6 cut(s)	148, 652, 1108, 2148, 2830, 2934
PspPI	GGNCC	8 cut(s)	340, 710, 719, 1101, 1639, 1988, 2245, 2885
PspPPI	RGGWCCY	3 cut(s)	1101, 2245, 2885
PsrI	GAACNNNNNNTAC	2 cut(s)	2610, 2642
PstI	CTGCAG	1 cut(s)	2731
PsuI	RGATCY	2 cut(s)	732, 804
RsaI	GTAC	5 cut(s)	663, 915, 1215, 1924, 2829
RsaNI	GTAC	5 cut(s)	662, 914, 1214, 1923, 2828
RseI	CAYNNNNRTG	6 cut(s)	388, 887, 947, 1590, 1955, 2706
Sau3AI	GATC	8 cut(s)	274, 418, 559, 732, 804, 1063, 1514, 1775
Sau96I	GGNCC	8 cut(s)	340, 710, 719, 1101, 1639, 1988, 2245, 2885
SchI	GAGTC	6 cut(s)	147, 183, 1312, 1429, 1736, 2972
ScrFI	CCNGG	7 cut(s)	150, 654, 1110, 1250, 2150, 2832, 2936
SduI	GDGCHC	2 cut(s)	237, 994
SfcI	CTRYAG	1 cut(s)	2727
Sfr274I	CTCGAG	1 cut(s)	1506
SinI	GGWCC	6 cut(s)	340, 710, 1101, 1639, 2245, 2885
SlaI	CTCGAG	1 cut(s)	1506
SmiMI	CAYNNNNRTG	6 cut(s)	388, 887, 947, 1590, 1955, 2706
SmlI	CTYRAG	7 cut(s)	14, 638, 800, 1325, 1356, 1506, 2441
SmoI	CTYRAG	7 cut(s)	14, 638, 800, 1325, 1356, 1506, 2441
SphI	GCATGC	1 cut(s)	378
SspMI	CTAG	1 cut(s)	624
StyD4I	CCNGG	7 cut(s)	148, 652, 1108, 1248, 2148, 2830, 2934
StyI	CCWWGG	1 cut(s)	2466
TaaI	ACNGT	2 cut(s)	2076, 2865
TaiI	ACGT	8 cut(s)	61, 131, 432, 661, 1126, 1144, 2329, 2976
TatI	WGTACW	2 cut(s)	661, 913
TauI	GCSGC	4 cut(s)	79, 82, 720, 2543
TfiI	GAWTC	6 cut(s)	9, 158, 2085, 2090, 2376, 2435
TseFI	GTSAC	4 cut(s)	84, 200, 2395, 2859
Tsp45I	GTSAC	4 cut(s)	84, 200, 2395, 2859
TspGWI	ACGGA	1 cut(s)	1134
Van91I	CCANNNNNTGG	2 cut(s)	516, 1004
Vha464I	CTTAAG	3 cut(s)	14, 638, 1325
VpaK11BI	GGWCC	6 cut(s)	340, 710, 1101, 1639, 2245, 2885
XapI	RAATTY	6 cut(s)	1340, 1376, 1821, 2294, 2532, 2623
XceI	RCATGY	3 cut(s)	378, 878, 2820
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2708
XhoI	CTCGAG	1 cut(s)	1506
XmiI	GTMKAC	2 cut(s)	1029, 1730
XmnI	GAANNNNTTC	3 cut(s)	1078, 1131, 2687
XspI	CTAG	1 cut(s)	624
ZraI	GACGTC	1 cut(s)	129
Zsp2I	ATGCAT	1 cut(s)	2950

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.