Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0010393

Physical Location & Seq

Genomic Coordinates Forward (+)

32341997 .. 32352344

Gene Structure 10348 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G345900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3081 bp

ATGAGGAGTGGATTCTGTGAGAGAGGAGCAATAGCCTTCCGCTCCCTTCAACTAACACAACTTTACCCTCGCTCTCCTCCTACTCCCGCTTGTCTGGCGCCGTCACTTCTCTCAATCTCTATCTCTTCCAATCGCTCCCTCACCACCTCCTACAAGTGCCTCCTTCTCAAACTAGCCTCCTATTCTTCATTGTCTGTAACGTCGTCGTTTCGTACCACCATGACGGGCGTCGAATCCAAGGGGGTGGAGTGGCCCGCTAAGCGTGTCAGGGACACGTTTATGAGGTTTTTCGAGGAGAAGAGCCACGTTTACTGGAAGTCTAGCCCTGTTGTGCCTCACAACGATCCCACTCTTCTATTCGCCAATGCTGGTATGAACCAGTTCAAGCCCATCTTTTTGGGCGCAGCTGACCCAAACACTCAGTTAAGCAAGCTGACTCGAGCTTGCAACACGCAGAAATGTATAAGAGCAGGTGGGAAGCACAACGATCTCGATGATGTAGGAAAAGACACTTACCACCATACCTTCTTTGAGATGCTTGGAAATTGGTCTTTTGGGGATTATTTCAAGAAAGAAGCCATTGGGTGGGCTTGGGAGCTTCTCACCCAGGTTTATAAGCTGCCAGAAGATCGAATTTATGCCACCTATTTTGGTGGTGATGAGAAGGCTGGTCTTGCTCCTGATAATGAAGCTAGAGATATATGGCTTAAGTTTTTACCATCTGCTCGGGTACTACCTTTTGGGTGTAAGGATAATTTCTGGGAGATGGGTGATACTGGTCCTTGTGGTCCTTGCACTGAAATTCATTATGATAGAATAGGTAATCGTGATGCTGCATCCTTAGTCAACAATGACGATCCTACCTGCATTGAAATATGGAATCTCGTCTTTATTCAGTTCAACAGGGAAAGTGATGGCTCTCTAAAACCACTGCCTGCTAAGCATGTTGACACTGGGATGGGATTCGAAAGATTAACTTCTGTACTTCAGAACAAGATGAGCAATTATGATACTGATGTTTTCATGCCCATCTTTGATGCTATCCAACAGGCAACAGGGGCTCGGTCATATTCAGGGAAAGTTGGGCTGGATGATGTAGACAAAGTTGACATGGCATACAGAGTTGTTGCAGATCATATAAGAACTCTTTCATTTGCCATTGCTGATGGGTCTCGTCCAGGCAATGATGGTCGTGAATATGTTCTAAGGCGTATTCTTCGTCGGGCTGTTCGGTATGGAAATGATGTCTTAAAAGCTAAAGAAGGATTCTTTAATGGGCTTGTAGGCATTCTGGTGACAGTGATGGGTGACGTTTTTCCAGAGGTGAAACAGCATGAAGCACATATTAGGGAGATAATCAAAGAGGAGGAAGAAACTTTTGAGAAGACTTTACAGAAGGGAATAGAAAGATTTAAGAAGGCTGCTCAGGATGTTCAAGGGAAAACATTTAGCGGGCAGGATGCTTTTGTCTTGTGGGACACGTATGGGTTTCCATTAGATTTGACACAGTTGATGGCAGAGGAAAGGGGGTTACTAGTTGATGTTGAGGGTTTCAATAATGCTATGGATGAGGCTCGGGAAAAATCAAGGAATGCTCAAACTAAGCAAGCTGGTGGTGCTATTGTTATGGATGCCGATGCTACTGCTGCATTGCACAAGAGGGGGGTTGCTGCAACAGATGACAGCTTTAAATTTATCTGGTGCCAGGACCATGAAAGTGTGATAAAAGCAATTTACACCGGTTCTGAGTTTATTAATAGTGCTTCTGCCGGAAATGAAGTTGGTATAGTTTTGGGATCAACAAGTTTCTATGCTGAGCAAGGTGGTCAGATTTTTGATACTGGATCACTTGAAGGATCCTCTCTCTCATTTCAAGTTTGCAATGTTCAAATTTATGGAGGTTTTGTTCTTCATATTGGTTCTTTTTCTGGGGAGAGTGGCAAACTCTCTGTTGGTGACAAAGTAAATTGCAAGGTTGACTACAATAGGCGTACACTCATTGCGCCCAACCATACCTGCACACACATGTTGAACTTTGCTCTGAGGGAAGTTCTTGGCAGTCATGTTGACCAGAAGGGTTCTATTGTTCTTCCTGAAAAATTAAGATTTGATTTTTCTCATGGCAAGCCGGTAGAACCTGACAATTTGAGAAGAATAGAGTCAATTGTGAATGAGCAAATTAAAGCAGAATTGGATGTTTTTGCTAAGGCGGTAACCCTGGTTGAAGCCAAGCGTATCAATGGTTTAAGGGCTGTATTTGGAGAGGTGTATCCTGACCCAGTAAGAGTGGTGGCTGTTGGGCGAAAAGTTGAGGACCTCCTGGCTGACCCTGAAAATAAGGAATGGTCATCAATTTCAGCAGAACTTTGTGGAGGGACTCATATATCAAATACGAGGGAAGCCAAGGCCTTTGCTCTTTTATCTGAGGAGGGAATTGCCAAGGGAATACGTAGGATAACTGCTGTCACAACTGATGGTGCCTTTAAGGCAATTGAATTAGCACACTCGCTGGAGCAGGAAGTAGATGAAGCGTCCAAGGCTGAAGGAAGCTTGCTGGAGAAGAAAGTAGCTTCCTTAAAGTCTCGGGTGGACTCGGCACCAATTCCAGTGGCTAACAAAGCTGAAATAAGGGCCAAAATTGCTGTACTTCAGAACCAAGTGAGGAAGGCACAAAAGATTATTGCTGAGCAAAATATGCAAAATGCTGTGAAGGTTGCAACTGAGATGGCCGAAGTTGCTGCTTCAGATGGGAAAGCTTACTGTGTATCCCATGTTGATGTTGGTTTGGATGCGGCTGCAGTTCGCGAGGCAGTTGTGAAAGTCATAGAGAAGAAGGGAATGCCTGCCATGGTTTTCAGCACAGATGAAACCACAAATAAGGCTGTGGTTTGTGCTGGCGTACCAGGAGACAAAGGGAACCAGTTGGAGGTGTCAGAGTGGTTGACTGCATCTCTGGGTCCCCTGAAAGGAAGGTGTGGTAAAGGAAAGGGTGGCCTTGCGACTGGCCAGGGAACAGATGCATCTCGTCTAAATGAAGCAGTAGACCTTGCAACGTCTTTTGCACAGATGAAATTGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000049 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004812 GO:0004813 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006412 GO:0006418 GO:0006419 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016070 GO:0016597 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0031406 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0036094 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:0140101 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

DHHA1 tRNA-synt_2c tRNA_SAD

Protein Analysis

1027

Amino Acids

112.57

Weight (kDa)

6.2

Isoelectric Point (pI)

32.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010393)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50200 AT1G50200
fragaria_vesca	FvH4_4g36780 FvH4_4g36780
malus_domestica	MD13G1007000.v1.1 MD16G1000800.v1.1
prunus_persica	Prupe.1G345900_v2.0.a1
pyrus_communis	pycom13g00590 pycom16g00460
rosa_chinensis	RchiOBHm_Chr4g0446511
rosa_laevigata	RLG00000005653
rosa_multiflora	Rmu_co8401425.1_g000001 Rmu_sc0005526.1_g000002 Rmu_sc0009884.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386930
rosa_rugosa	Rorug04G0372100 Rorug04G0372200
rosa_samantha	Rh4BG442800 Rh4CG460300 Rh4DG441500
rosa_wichuraiana	Rw4G037060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	615
AarI	CACCTGC	1 cut(s)	461
Acc36I	ACCTGC	3 cut(s)	461, 872, 2024
AccB1I	GGYRCC	4 cut(s)	97, 1701, 2477, 2596
AccB7I	CCANNNNNTGG	1 cut(s)	585
AccBSI	CCGCTC	1 cut(s)	42
AccI	GTMKAC	2 cut(s)	1098, 3042
AccII	CGCG	1 cut(s)	2805
AciI	CCGC	6 cut(s)	40, 87, 255, 1452, 2210, 2792
AclWI	GGATC	6 cut(s)	338, 851, 1804, 1851, 1852, 1864
AcoI	YGGCCR	2 cut(s)	2727, 3004
AcsI	RAATTY	4 cut(s)	633, 801, 1691, 1890
AcuI	CTGAAG	4 cut(s)	971, 2562, 2633, 2727
AcyI	GRCGYC	2 cut(s)	98, 228
AfaI	GTAC	6 cut(s)	214, 732, 984, 1993, 2646, 2901
AfiI	CCNNNNNNNGG	3 cut(s)	585, 2926, 2966
AflII	CTTAAG	1 cut(s)	707
AflIII	ACRYGT	3 cut(s)	273, 1479, 2025
AgeI	ACCGGT	1 cut(s)	1739
AhlI	ACTAGT	1 cut(s)	1534
AjnI	CCWGG	7 cut(s)	606, 1177, 1704, 2217, 2319, 2902, 3006
AloI	GAACNNNNNNTCC	2 cut(s)	1890, 1922
Alw26I	GTCTC	3 cut(s)	1176, 2586, 2901
AlwI	GGATC	6 cut(s)	338, 851, 1804, 1851, 1852, 1864
Ama87I	CYCGRG	4 cut(s)	438, 726, 1575, 2583
AoxI	GGCC	6 cut(s)	251, 2406, 2631, 2727, 2992, 3004
ApeKI	GCWGC	8 cut(s)	404, 619, 833, 1421, 1646, 1670, 2738, 2795
ApoI	RAATTY	4 cut(s)	633, 801, 1691, 1890
AseI	ATTAAT	1 cut(s)	1755
AsiGI	ACCGGT	1 cut(s)	1739
Asp700I	GAANNNNTTC	3 cut(s)	380, 1147, 1200
AspLEI	GCGC	3 cut(s)	100, 404, 2005
AspS9I	GGNCC	7 cut(s)	252, 779, 788, 1708, 2314, 2631, 2957
AsuHPI	GGTGA	8 cut(s)	133, 595, 668, 782, 1306, 1319, 1336, 1967
AsuII	TTCGAA	1 cut(s)	966
AvaI	CYCGRG	4 cut(s)	438, 726, 1575, 2583
AvaII	GGWCC	5 cut(s)	779, 788, 1708, 2314, 2957
BaeI	ACNNNNGTAYC	2 cut(s)	1002, 1035
BalI	TGGCCA	1 cut(s)	3006
BamHI	GGATCC	1 cut(s)	1856
BanI	GGYRCC	4 cut(s)	97, 1701, 2477, 2596
BanII	GRGCYC	1 cut(s)	1063
BbsI	GAAGAC	1 cut(s)	1391
BbvI	GCAGC	8 cut(s)	416, 606, 820, 1408, 1633, 1657, 2725, 2782
BceAI	ACGGC	1 cut(s)	85
BcgI	CGANNNNNNTGC	4 cut(s)	1625, 1659, 2720, 2754
BciT130I	CCWGG	7 cut(s)	608, 1179, 1706, 2219, 2321, 2904, 3008
BciVI	GTATCC	2 cut(s)	2280, 2776
BcoDI	GTCTC	3 cut(s)	1176, 2586, 2901
BcuI	ACTAGT	1 cut(s)	1534
BfaI	CTAG	4 cut(s)	173, 321, 693, 1535
BfmI	CTRYAG	1 cut(s)	2796
BfoI	RGCGCY	1 cut(s)	101
BfrI	CTTAAG	1 cut(s)	707
BfuAI	ACCTGC	3 cut(s)	461, 872, 2024
BfuI	GTATCC	2 cut(s)	2280, 2776
BglI	GCCNNNNNGGC	1 cut(s)	2486
BisI	GCNGC	9 cut(s)	405, 620, 834, 1422, 1647, 1671, 2739, 2793, 2796
BlpI	GCTNAGC	4 cut(s)	258, 939, 1815, 2685
BlsI	GCNGC	9 cut(s)	406, 621, 835, 1423, 1648, 1672, 2740, 2794, 2797
Bme1390I	CCNGG	7 cut(s)	608, 1179, 1706, 2219, 2321, 2904, 3008
Bme18I	GGWCC	5 cut(s)	779, 788, 1708, 2314, 2957
BmeT110I	CYCGRG	4 cut(s)	438, 726, 1575, 2583
BmgT120I	GGNCC	7 cut(s)	252, 779, 788, 1708, 2314, 2631, 2957
BmiI	GGNNCC	8 cut(s)	99, 1703, 1858, 2479, 2598, 2918, 2958, 2959
BmrFI	CCNGG	7 cut(s)	608, 1179, 1706, 2219, 2321, 2904, 3008
BmrI	ACTGGG	2 cut(s)	963, 2273
BmuI	ACTGGG	2 cut(s)	963, 2273
BoxI	GACNNNNGTC	1 cut(s)	227
BpiI	GAAGAC	1 cut(s)	1391
BpmI	CTGGAG	2 cut(s)	2531, 2576
Bpu10I	CCTNAGC	2 cut(s)	1425, 2205
Bpu1102I	GCTNAGC	4 cut(s)	258, 939, 1815, 2685
Bpu14I	TTCGAA	1 cut(s)	966
BsaAI	YACGTR	2 cut(s)	1482, 2450
BsaHI	GRCGYC	2 cut(s)	98, 228
BsaI	GGTCTC	1 cut(s)	1176
BsaJI	CCNNGG	8 cut(s)	237, 606, 2217, 2403, 2439, 2535, 2847, 3007
BsaWI	WCCGGW	1 cut(s)	1739
BsaXI	ACNNNNNCTCC	2 cut(s)	1890, 1920
Bsc4I	CCNNNNNNNGG	3 cut(s)	585, 2926, 2966
Bse118I	RCCGGY	2 cut(s)	1739, 2128
Bse1I	ACTGG	9 cut(s)	317, 379, 781, 958, 1846, 2279, 2606, 2920, 3007
Bse3DI	GCAATG	5 cut(s)	1158, 1189, 1649, 1888, 1998
BseBI	CCWGG	7 cut(s)	608, 1179, 1706, 2219, 2321, 2904, 3008
BseDI	CCNNGG	8 cut(s)	237, 606, 2217, 2403, 2439, 2535, 2847, 3007
BseGI	GGATG	9 cut(s)	836, 963, 1096, 1435, 1465, 1573, 1636, 2200, 2794
BseLI	CCNNNNNNNGG	3 cut(s)	585, 2926, 2966
BseMI	GCAATG	5 cut(s)	1158, 1189, 1649, 1888, 1998
BseMII	CTCAG	8 cut(s)	434, 1439, 1737, 1806, 2033, 2415, 2676, 2712
BseNI	ACTGG	9 cut(s)	317, 379, 781, 958, 1846, 2279, 2606, 2920, 3007
BseRI	GAGGAG	6 cut(s)	19, 39, 66, 308, 1379, 2441
BseXI	GCAGC	8 cut(s)	416, 606, 820, 1408, 1633, 1657, 2725, 2782
BsgI	GTGCAG	1 cut(s)	2002
Bsh1236I	CGCG	1 cut(s)	2805
BshFI	GGCC	6 cut(s)	253, 2408, 2633, 2729, 2994, 3006
BshNI	GGYRCC	4 cut(s)	97, 1701, 2477, 2596
BshTI	ACCGGT	1 cut(s)	1739
BsiHKCI	CYCGRG	4 cut(s)	438, 726, 1575, 2583
BsiSI	CCGG	3 cut(s)	1740, 1770, 2129
BslFI	GGGAC	4 cut(s)	284, 1490, 2389, 2943
BslI	CCNNNNNNNGG	3 cut(s)	585, 2926, 2966
BsmAI	GTCTC	3 cut(s)	1176, 2586, 2901
BsmFI	GGGAC	4 cut(s)	284, 1490, 2389, 2943
BsmI	GAATGC	3 cut(s)	1287, 1597, 2844
BsnI	GGCC	6 cut(s)	253, 2408, 2633, 2729, 2994, 3006
Bso31I	GGTCTC	1 cut(s)	1176
BsoBI	CYCGRG	4 cut(s)	438, 726, 1575, 2583
Bsp119I	TTCGAA	1 cut(s)	966
Bsp1286I	GDGCHC	1 cut(s)	1063
Bsp143I	GATC	8 cut(s)	343, 487, 628, 856, 1132, 1796, 1844, 1856
Bsp1720I	GCTNAGC	4 cut(s)	258, 939, 1815, 2685
Bsp19I	CCATGG	1 cut(s)	2847
Bsp68I	TCGCGA	1 cut(s)	2805
BspACI	CCGC	6 cut(s)	40, 87, 255, 1452, 2210, 2792
BspANI	GGCC	6 cut(s)	253, 2408, 2633, 2729, 2994, 3006
BspCNI	CTCAG	8 cut(s)	433, 1438, 1738, 1807, 2034, 2416, 2677, 2713
BspFNI	CGCG	1 cut(s)	2805
BspLI	GGNNCC	8 cut(s)	99, 1703, 1858, 2479, 2598, 2918, 2958, 2959
BspMAI	CTGCAG	1 cut(s)	2800
BspMI	ACCTGC	3 cut(s)	461, 872, 2024
BspPI	GGATC	6 cut(s)	338, 851, 1804, 1851, 1852, 1864
BspQI	GCTCTTC	1 cut(s)	293
BspT104I	TTCGAA	1 cut(s)	966
BspT107I	GGYRCC	4 cut(s)	97, 1701, 2477, 2596
BspTI	CTTAAG	1 cut(s)	707
BspTNI	GGTCTC	1 cut(s)	1176
BsrBI	CCGCTC	1 cut(s)	42
BsrDI	GCAATG	5 cut(s)	1158, 1189, 1649, 1888, 1998
BsrFI	RCCGGY	2 cut(s)	1739, 2128
BsrI	ACTGG	9 cut(s)	317, 379, 781, 958, 1846, 2279, 2606, 2920, 3007
BssAI	RCCGGY	2 cut(s)	1739, 2128
BssECI	CCNNGG	8 cut(s)	237, 606, 2217, 2403, 2439, 2535, 2847, 3007
BssMI	GATC	8 cut(s)	343, 487, 628, 856, 1132, 1796, 1844, 1856
BssNI	GRCGYC	2 cut(s)	98, 228
BssT1I	CCWWGG	5 cut(s)	237, 2403, 2439, 2535, 2847
Bst2UI	CCWGG	7 cut(s)	608, 1179, 1706, 2219, 2321, 2904, 3008
Bst4CI	ACNGT	3 cut(s)	1300, 1509, 2762
Bst6I	CTCTTC	3 cut(s)	130, 293, 357
BstACI	GRCGYC	2 cut(s)	98, 228
BstAFI	CTTAAG	1 cut(s)	707
BstAPI	GCANNNNNTGC	1 cut(s)	2695
BstBAI	YACGTR	2 cut(s)	1482, 2450
BstBI	TTCGAA	1 cut(s)	966
BstDSI	CCRYGG	1 cut(s)	2847
BstEII	GGTNACC	1 cut(s)	2212
BstF5I	GGATG	9 cut(s)	836, 963, 1096, 1435, 1465, 1573, 1636, 2200, 2794
BstFNI	CGCG	1 cut(s)	2805
BstH2I	RGCGCY	1 cut(s)	101
BstHHI	GCGC	3 cut(s)	100, 404, 2005
BstKTI	GATC	8 cut(s)	346, 490, 631, 859, 1135, 1799, 1847, 1859
BstMAI	GTCTC	3 cut(s)	1176, 2586, 2901
BstMBI	GATC	8 cut(s)	343, 487, 628, 856, 1132, 1796, 1844, 1856
BstNI	CCWGG	7 cut(s)	608, 1179, 1706, 2219, 2321, 2904, 3008
BstNSI	RCATGY	2 cut(s)	947, 2029
BstPAI	GACNNNNGTC	1 cut(s)	227
BstPI	GGTNACC	1 cut(s)	2212
BstSCI	CCNGG	7 cut(s)	606, 1177, 1704, 2217, 2319, 2902, 3006
BstSFI	CTRYAG	1 cut(s)	2796
BstSNI	TACGTA	1 cut(s)	2450
BstUI	CGCG	1 cut(s)	2805
BstV1I	GCAGC	8 cut(s)	416, 606, 820, 1408, 1633, 1657, 2725, 2782
BstV2I	GAAGAC	1 cut(s)	1391
BstX2I	RGATCY	1 cut(s)	1856
BstXI	CCANNNNNNTGG	2 cut(s)	244, 397
BstYI	RGATCY	1 cut(s)	1856
BsuI	GTATCC	2 cut(s)	2280, 2776
BsuRI	GGCC	6 cut(s)	253, 2408, 2633, 2729, 2994, 3006
BtgI	CCRYGG	1 cut(s)	2847
BtsCI	GGATG	9 cut(s)	836, 963, 1096, 1435, 1465, 1573, 1636, 2200, 2794
BtsI	GCAGTG	1 cut(s)	929
BtsIMutI	CAGTG	5 cut(s)	795, 929, 951, 1305, 2613
BtuMI	TCGCGA	1 cut(s)	2805
BveI	ACCTGC	3 cut(s)	461, 872, 2024
CfoI	GCGC	3 cut(s)	100, 404, 2005
Cfr10I	RCCGGY	2 cut(s)	1739, 2128
Cfr13I	GGNCC	7 cut(s)	252, 779, 788, 1708, 2314, 2631, 2957
CseI	GACGC	2 cut(s)	217, 2520
Csp6I	GTAC	6 cut(s)	213, 731, 983, 1992, 2645, 2900
CspAI	ACCGGT	1 cut(s)	1739
CspCI	CAANNNNNGTGG	4 cut(s)	631, 666, 2589, 2624
CviQI	GTAC	6 cut(s)	213, 731, 983, 1992, 2645, 2900
DinI	GGCGCC	1 cut(s)	99
DpnI	GATC	8 cut(s)	345, 489, 630, 858, 1134, 1798, 1846, 1858
DpnII	GATC	8 cut(s)	343, 487, 628, 856, 1132, 1796, 1844, 1856
DraI	TTTAAA	1 cut(s)	1690
EaeI	YGGCCR	2 cut(s)	2727, 3004
Eam1104I	CTCTTC	3 cut(s)	130, 293, 357
EarI	CTCTTC	3 cut(s)	130, 293, 357
Eco105I	TACGTA	1 cut(s)	2450
Eco130I	CCWWGG	5 cut(s)	237, 2403, 2439, 2535, 2847
Eco147I	AGGCCT	1 cut(s)	2408
Eco24I	GRGCYC	1 cut(s)	1063
Eco31I	GGTCTC	1 cut(s)	1176
Eco47I	GGWCC	5 cut(s)	779, 788, 1708, 2314, 2957
Eco57I	CTGAAG	4 cut(s)	971, 2562, 2633, 2727
Eco88I	CYCGRG	4 cut(s)	438, 726, 1575, 2583
Eco91I	GGTNACC	1 cut(s)	2212
EcoO109I	RGGNCCY	2 cut(s)	2314, 2957
EcoO65I	GGTNACC	1 cut(s)	2212
EcoRII	CCWGG	7 cut(s)	606, 1177, 1704, 2217, 2319, 2902, 3006
EcoT14I	CCWWGG	5 cut(s)	237, 2403, 2439, 2535, 2847
EcoT22I	ATGCAT	1 cut(s)	3022
EcoT38I	GRGCYC	1 cut(s)	1063
EgeI	GGCGCC	1 cut(s)	99
EheI	GGCGCC	1 cut(s)	99
ErhI	CCWWGG	5 cut(s)	237, 2403, 2439, 2535, 2847
FalI	AAGNNNNNCTT	4 cut(s)	377, 409, 961, 993
FaqI	GGGAC	4 cut(s)	284, 1490, 2389, 2943
FauI	CCCGC	3 cut(s)	94, 262, 1445
FblI	GTMKAC	2 cut(s)	1098, 3042
Fnu4HI	GCNGC	9 cut(s)	405, 620, 834, 1422, 1647, 1671, 2739, 2793, 2796
FokI	GGATG	9 cut(s)	823, 970, 1103, 1442, 1472, 1580, 1643, 2207, 2801
FriOI	GRGCYC	1 cut(s)	1063
Fsp4HI	GCNGC	9 cut(s)	405, 620, 834, 1422, 1647, 1671, 2739, 2793, 2796
FspBI	CTAG	4 cut(s)	173, 321, 693, 1535
GlaI	GCGC	3 cut(s)	99, 403, 2004
GluI	GCNGC	9 cut(s)	405, 620, 834, 1422, 1647, 1671, 2739, 2793, 2796
GsuI	CTGGAG	2 cut(s)	2531, 2576
HaeII	RGCGCY	1 cut(s)	101
HaeIII	GGCC	6 cut(s)	253, 2408, 2633, 2729, 2994, 3006
HapII	CCGG	3 cut(s)	1740, 1770, 2129
HgaI	GACGC	2 cut(s)	217, 2520
HhaI	GCGC	3 cut(s)	100, 404, 2005
Hin1I	GRCGYC	2 cut(s)	98, 228
Hin6I	GCGC	3 cut(s)	98, 402, 2003
HinP1I	GCGC	3 cut(s)	98, 402, 2003
HincII	GTYRAC	6 cut(s)	847, 949, 1108, 1978, 2068, 2943
HindII	GTYRAC	6 cut(s)	847, 949, 1108, 1978, 2068, 2943
HindIII	AAGCTT	2 cut(s)	2548, 2754
HinfI	GANTC	9 cut(s)	12, 233, 436, 880, 963, 1266, 2159, 2377, 2591
HpaII	CCGG	3 cut(s)	1740, 1770, 2129
HphI	GGTGA	8 cut(s)	133, 595, 668, 782, 1306, 1319, 1336, 1967
Hpy188I	TCNGA	8 cut(s)	990, 1747, 1830, 2043, 2425, 2652, 2746, 2935
Hpy99I	CGWCG	4 cut(s)	205, 208, 233, 1224
HpyCH4III	ACNGT	3 cut(s)	1300, 1509, 2762
HpyCH4IV	ACGT	7 cut(s)	200, 275, 306, 1311, 1481, 2449, 3053
HpySE526I	ACGT	7 cut(s)	200, 275, 306, 1311, 1481, 2449, 3053
Hsp92I	GRCGYC	2 cut(s)	98, 228
HspAI	GCGC	3 cut(s)	98, 402, 2003
KasI	GGCGCC	1 cut(s)	97
KflI	GGGWCCC	1 cut(s)	2957
Kzo9I	GATC	8 cut(s)	343, 487, 628, 856, 1132, 1796, 1844, 1856
LguI	GCTCTTC	1 cut(s)	293
LmnI	GCTCC	6 cut(s)	26, 47, 140, 595, 682, 2512
Lsp1109I	GCAGC	8 cut(s)	416, 606, 820, 1408, 1633, 1657, 2725, 2782
MaeI	CTAG	4 cut(s)	173, 321, 693, 1535
MaeII	ACGT	7 cut(s)	200, 275, 306, 1311, 1481, 2449, 3053
MaeIII	GTNAC	8 cut(s)	102, 196, 1294, 1307, 1530, 1955, 2212, 2464
MalI	GATC	8 cut(s)	345, 489, 630, 858, 1134, 1798, 1846, 1858
MbiI	CCGCTC	1 cut(s)	42
MboI	GATC	8 cut(s)	343, 487, 628, 856, 1132, 1796, 1844, 1856
MfeI	CAATTG	2 cut(s)	2163, 2490
MflI	RGATCY	1 cut(s)	1856
MhlI	GDGCHC	1 cut(s)	1063
MlsI	TGGCCA	1 cut(s)	3006
MluNI	TGGCCA	1 cut(s)	3006
Mly113I	GGCGCC	1 cut(s)	98
MlyI	GAGTC	4 cut(s)	430, 2168, 2371, 2585
MmeI	TCCRAC	2 cut(s)	1069, 2904
Mox20I	TGGCCA	1 cut(s)	3006
Mph1103I	ATGCAT	1 cut(s)	3022
MroXI	GAANNNNTTC	3 cut(s)	380, 1147, 1200
MscI	TGGCCA	1 cut(s)	3006
MslI	CAYNNNNRTG	6 cut(s)	278, 956, 1292, 1716, 2024, 2775
Msp20I	TGGCCA	1 cut(s)	3006
MspA1I	CMGCKG	1 cut(s)	407
MspCI	CTTAAG	1 cut(s)	707
MspI	CCGG	3 cut(s)	1740, 1770, 2129
MspR9I	CCNGG	7 cut(s)	608, 1179, 1706, 2219, 2321, 2904, 3008
MunI	CAATTG	2 cut(s)	2163, 2490
Mva1269I	GAATGC	3 cut(s)	1287, 1597, 2844
MvaI	CCWGG	7 cut(s)	608, 1179, 1706, 2219, 2321, 2904, 3008
MvnI	CGCG	1 cut(s)	2805
NarI	GGCGCC	1 cut(s)	98
NcoI	CCATGG	1 cut(s)	2847
NdeII	GATC	8 cut(s)	343, 487, 628, 856, 1132, 1796, 1844, 1856
NlaIV	GGNNCC	8 cut(s)	99, 1703, 1858, 2479, 2598, 2918, 2958, 2959
NmeAIII	GCCGAG	1 cut(s)	2573
NmuCI	GTSAC	5 cut(s)	102, 1294, 1307, 1955, 2464
NruI	TCGCGA	1 cut(s)	2805
NsiI	ATGCAT	1 cut(s)	3022
NspI	RCATGY	2 cut(s)	947, 2029
NspV	TTCGAA	1 cut(s)	966
PaeR7I	CTCGAG	1 cut(s)	438
PaqCI	CACCTGC	1 cut(s)	461
PceI	AGGCCT	1 cut(s)	2408
PciI	ACATGT	1 cut(s)	2025
PciSI	GCTCTTC	1 cut(s)	293
PctI	GAATGC	3 cut(s)	1287, 1597, 2844
PdmI	GAANNNNTTC	3 cut(s)	380, 1147, 1200
PfeI	GAWTC	5 cut(s)	12, 233, 880, 963, 1266
PflMI	CCANNNNNTGG	1 cut(s)	585
PinAI	ACCGGT	1 cut(s)	1739
PkrI	GCNGC	9 cut(s)	406, 621, 835, 1423, 1648, 1672, 2740, 2794, 2797
PleI	GAGTC	4 cut(s)	430, 2167, 2371, 2585
PluTI	GGCGCC	1 cut(s)	101
PpsI	GAGTC	4 cut(s)	430, 2167, 2371, 2585
Ppu21I	YACGTR	2 cut(s)	1482, 2450
PpuMI	RGGWCCY	2 cut(s)	2314, 2957
PscI	ACATGT	1 cut(s)	2025
PshAI	GACNNNNGTC	1 cut(s)	227
PshBI	ATTAAT	1 cut(s)	1755
PsiI	TTATAA	1 cut(s)	615
Psp5II	RGGWCCY	2 cut(s)	2314, 2957
Psp6I	CCWGG	7 cut(s)	606, 1177, 1704, 2217, 2319, 2902, 3006
PspEI	GGTNACC	1 cut(s)	2212
PspGI	CCWGG	7 cut(s)	606, 1177, 1704, 2217, 2319, 2902, 3006
PspN4I	GGNNCC	8 cut(s)	99, 1703, 1858, 2479, 2598, 2918, 2958, 2959
PspPI	GGNCC	7 cut(s)	252, 779, 788, 1708, 2314, 2631, 2957
PspPPI	RGGWCCY	2 cut(s)	2314, 2957
PspXI	VCTCGAGB	1 cut(s)	438
PstI	CTGCAG	1 cut(s)	2800
PsuI	RGATCY	1 cut(s)	1856
PvuII	CAGCTG	1 cut(s)	407
RruI	TCGCGA	1 cut(s)	2805
RsaI	GTAC	6 cut(s)	214, 732, 984, 1993, 2646, 2901
RsaNI	GTAC	6 cut(s)	213, 731, 983, 1992, 2645, 2900
RseI	CAYNNNNRTG	6 cut(s)	278, 956, 1292, 1716, 2024, 2775
SapI	GCTCTTC	1 cut(s)	293
SatI	GCNGC	9 cut(s)	405, 620, 834, 1422, 1647, 1671, 2739, 2793, 2796
Sau3AI	GATC	8 cut(s)	343, 487, 628, 856, 1132, 1796, 1844, 1856
Sau96I	GGNCC	7 cut(s)	252, 779, 788, 1708, 2314, 2631, 2957
SchI	GAGTC	4 cut(s)	430, 2168, 2371, 2585
ScrFI	CCNGG	7 cut(s)	608, 1179, 1706, 2219, 2321, 2904, 3008
SduI	GDGCHC	1 cut(s)	1063
SfcI	CTRYAG	1 cut(s)	2796
SfoI	GGCGCC	1 cut(s)	99
Sfr274I	CTCGAG	1 cut(s)	438
SfuI	TTCGAA	1 cut(s)	966
SinI	GGWCC	5 cut(s)	779, 788, 1708, 2314, 2957
SlaI	CTCGAG	1 cut(s)	438
SmiMI	CAYNNNNRTG	6 cut(s)	278, 956, 1292, 1716, 2024, 2775
SmlI	CTYRAG	2 cut(s)	438, 707
SmoI	CTYRAG	2 cut(s)	438, 707
SnaBI	TACGTA	1 cut(s)	2450
SpeI	ACTAGT	1 cut(s)	1534
SseBI	AGGCCT	1 cut(s)	2408
SsiI	CCGC	6 cut(s)	40, 87, 255, 1452, 2210, 2792
SspDI	GGCGCC	1 cut(s)	97
SspMI	CTAG	4 cut(s)	173, 321, 693, 1535
StuI	AGGCCT	1 cut(s)	2408
StyD4I	CCNGG	7 cut(s)	606, 1177, 1704, 2217, 2319, 2902, 3006
StyI	CCWWGG	5 cut(s)	237, 2403, 2439, 2535, 2847
TaaI	ACNGT	3 cut(s)	1300, 1509, 2762
TaiI	ACGT	7 cut(s)	203, 278, 309, 1314, 1484, 2452, 3056
TaqI	TCGA	6 cut(s)	231, 291, 439, 492, 631, 966
TaqII	GACCGA	1 cut(s)	1053
TatI	WGTACW	2 cut(s)	982, 2644
TauI	GCSGC	1 cut(s)	2795
TfiI	GAWTC	5 cut(s)	12, 233, 880, 963, 1266
TscAI	CASTG	5 cut(s)	802, 936, 958, 1305, 2613
TseFI	GTSAC	5 cut(s)	102, 1294, 1307, 1955, 2464
TseI	GCWGC	8 cut(s)	404, 619, 833, 1421, 1646, 1670, 2738, 2795
Tsp45I	GTSAC	5 cut(s)	102, 1294, 1307, 1955, 2464
TspRI	CASTG	5 cut(s)	802, 936, 958, 1305, 2613
Van91I	CCANNNNNTGG	1 cut(s)	585
Vha464I	CTTAAG	1 cut(s)	707
VpaK11BI	GGWCC	5 cut(s)	779, 788, 1708, 2314, 2957
VspI	ATTAAT	1 cut(s)	1755
XapI	RAATTY	4 cut(s)	633, 801, 1691, 1890
XceI	RCATGY	2 cut(s)	947, 2029
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2777
XhoI	CTCGAG	1 cut(s)	438
XmiI	GTMKAC	2 cut(s)	1098, 3042
XmnI	GAANNNNTTC	3 cut(s)	380, 1147, 1200
XspI	CTAG	4 cut(s)	173, 321, 693, 1535
Zsp2I	ATGCAT	1 cut(s)	3022

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.