Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0010393

Physical Location & Seq

Genomic Coordinates Reverse (-)

371418 .. 380508

Gene Structure 9091 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g00590.20

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3063 bp

ATGAGGAGTGGATTCCGTGAGAAAGGAATAATAGCCTTCCGCTTCCTTCACCTCTTACAACCTTACTCTCGTTTCACTTCTCCCTCTGCTCCCGTTCATTTCCCGCCGCCGCTCCTCTCTAGCTCCCTCCTCTCTCGCAGTCGCCCCCTCGCCGCGGGCTACAGGTGCTACTCATCCTCCGCGACGTCCTCGTCTCCCTCCGCCATGGCGGGCGGTGAATCGCAGGAAGTGGAGTGGCCGGCGAAGCGCGTCAGGGACACCTTCGTCAAGTTTTTCGAGGACAAGGGCCACATCTTCTGGACGTCTAGCCCCGTCGTTCCTCACAACGATCCCACTCTTTTATTCGCCAATGCTGGTATGAACCAGTTCAAGCCCATTTTTCTGGGGACAGCAGACCCAAACACTCAGTTGAGCAAGCTGACTCGAGCATGCAACACCCAGAAATGTATAAGAGCAGGCGGGAAGCACAACGATCTCGATGATGTAGGGAAAGACACTTACCACCACACCTTCTTTGAGATGCTCGGCAATTGGTCTTTCGGGGATTATTTCAAGAAAGAAGCCATTGGATGGGCTTGGGAGCTTCTCACAAAAGTTTATAAGCTGCCAGAAGATCGATTTTATGCCACCTATTTTGGTGGTGATGAGAAGGCTGGTCTTGCTCCTGATGATGAAGCTAGAGAGTTATGGCTTAAGTTTCTACCTGCCGGCCATGTACTACCATTTGGCAGTAAGGATAATTTCTGGGAGATGGGCGATACGGGTCCTTGTGGTCCTTGCACAGAAATCCATTACGATAGAATAGGAAATCGTGATGCTGCATCATTAGTCAACAACGATGATCCTACCTGCATTGAAATTTGGAACCTTGTCTTTATTCAGTTCAATAGGGAAAGTGATGGTTCTCTAAAACCGCTCCCTGCTAAGCATGTTGACACTGGGATGGGATTTGAAAGATTAACTTCTATACTTCAGAACAAGATGAGCAATTATGATACTGATGTGTTCATGCCCATCTTTGATGCTATCCAAAAGGCAACAGGGGCTCCACCATATTCTGGGAAAGTTGGTGTGGATGATGTAGACAAAATTGACATGGCATACAGAGTTGTTGGAGATCATATTAGAACTCTTTCATTTTCCATTGCTGATGGGTCTCGTCCAGGCAATGACGGCCGCGAATATGTTCTGAGGCGCATTCTTCGTCGTGCTGTTCGGTATGGAAACGATGTACTAAAAGCTAAAGAAGGATTTTTCAATGGGCTTGTAGACATTCTGGTGACAGTGATGGGTGATGTTTTTCCAGAGGTACAACAACATGAAGCACATATAAGGGAGGTAATCAAAGAGGAGGAAGATACTTTTGAGAAGACTTTACAGAAGGGAATAGAAAGATTCAAGAAGGCTGCTCAGGATGTTCAAGGCAAAACATTTAGTGGGCAGGATGCTTTTGTTTTGTGGGACACATTTGGGTTTCCATTAGATTTGACTCAGTTGATGGCAGAGGAAAGGGGATTAATAGTTGATGTTGAGGGTTTCAATAATGCTATGGATGAGGCTCGAGAAAGATCAAGGAGTGCTCAAAATAAGCAATCTGGTGGTGCTATTGTTATGGATGCTGATGCTACTGCTACATTGCACAAGAGGGGGGTTGCTGCAACAGATGACAGCTTTAAATTTATTTGGAACCAGGACCATGAAAGTGTGGTAAAAGCAATTTATACTGGTTCTGAGTTTATTAATAGTGCTTCTGCTGGCAATGAAGTTGGTATAGTTTTGGAGTCTACAAATTTTTATGCTGAGCAAGGTGGTCAGATTTTTGATACTGGGTCACTTGAAGGATCCTCTCTCTCATTTCAAGTTTGCAATGTTCAAATTTATGGAGGTTTTGTTGTCCACATTGGCTCTTTTTCTGGAGAGGGTGGCAAACTCTTAGTCGGTGACAAAGTAATTTGTAAGGTTGACTACAATAGGCGTAAACTCATTGCACCCAACCATACCTGCACGCACATGTTGAATTTTGCTCTGAGGGAAGTTCTTGGCAATCATGTCGACCAGAAGGGTTCTATTGTTCTTGCTGAGAAATTGAGATTTGATTTTTCACATGGCAAGCCAGTAGATCCCGACAGTTTGAGAAGAATAGAATCAATTGTGAATGAGCAAATCACAGCTGAATTAGGTGTATTTGCTAAGGAGGTAGCCCTGGTTGATGCCAAGCGCATCAATGGTTTAAGGGCTGTATTTGGAGAGGTATATCCTGACCCAGTAAGAGTGGTAGCTATTGGGCGAAAGGTTGAGGACCTTTTGGAATACCCTGAAAATGAGGAATGGTTATCAATTTCAGCAGAACTTTGTGGAGGGACACATATATCAAATACACGTGAAGCAAAGGCCTTTGCTCTTTTATCTGAGGAGGGAATTGCTAAGGGAATACGGAGAATAACTGCTGTCACAAGTGAAATTGCTTTTCAGGCAATTGAATTGGCTCGGTCACTTGAGCAAGACGTACATGAAGCGTCCAAGGCTGAAGGAAGCTTGCTGGAGAAGAAAGTAGCTTCCCTAAAATCTCGTGTGGACTCGGCACCAATTCCAGCTGCTAAGAAAGCTGAAATCAGGGCCAAGATGGCTGTGCTTCAGAACCAATTAAAGACAGCTCAGAAGTTGATTGCAGAGCAAAATATAAAGAATGCTGTCAAGGTTGCAACTGAGATGGCTGAAGTTGCTGCTTCGGATGGGAAAGCTTACTGTGTTTCCCAAGTTGATGTTGGTTTGGATGCAGCCGCAGTTCGTGAGGCTGTTTTGAAGATCACTGGGATGGGAATGCCCGCCATGGTTTTCAGCACGGATGAGACCACAAATAAAGCTTTGGTGTGTGCTGGCGTACCAGGGGACAAGGGCACTCAGTTGGAGGTCTCAGAGTGGTTGACAGCAGCTATGGGTCCTTTGAATGGAAGATGCGGAAAAGGAAAAGGTGGCCTTGCCTCTGGCCAGGGAACAGATGCATCTCGTCTAAATGAGGCGATAGACCTTGCGACGAGTTTTGCACAGATGAAACTGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000049 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004812 GO:0004813 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006412 GO:0006418 GO:0006419 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016070 GO:0016597 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0031406 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0036094 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043177 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:0140101 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

DHHA1 tRNA-synt_2c tRNA_SAD

Protein Analysis

1021

Amino Acids

111.95

Weight (kDa)

5.77

Isoelectric Point (pI)

37.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010393)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50200 AT1G50200
fragaria_vesca	FvH4_4g36780 FvH4_4g36780
malus_domestica	MD13G1007000.v1.1 MD16G1000800.v1.1
prunus_persica	Prupe.1G345900_v2.0.a1
pyrus_communis	pycom13g00590 pycom16g00460
rosa_chinensis	RchiOBHm_Chr4g0446511
rosa_laevigata	RLG00000005653
rosa_multiflora	Rmu_co8401425.1_g000001 Rmu_sc0005526.1_g000002 Rmu_sc0009884.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386930
rosa_rugosa	Rorug04G0372100 Rorug04G0372200
rosa_samantha	Rh4BG442800 Rh4CG460300 Rh4DG441500
rosa_wichuraiana	Rw4G037060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	600
AasI	GACNNNNNNGTC	2 cut(s)	190, 263
AatII	GACGTC	2 cut(s)	188, 305
Acc36I	ACCTGC	3 cut(s)	712, 857, 2009
AccB1I	GGYRCC	1 cut(s)	2581
AccB7I	CCANNNNNTGG	2 cut(s)	570, 1058
AccBSI	CCGCTC	2 cut(s)	112, 916
AccI	GTMKAC	4 cut(s)	1083, 1269, 1784, 2052
AccII	CGCG	4 cut(s)	155, 182, 249, 1179
AclWI	GGATC	5 cut(s)	323, 836, 1836, 1849, 2114
AcoI	YGGCCR	4 cut(s)	236, 709, 1174, 2986
AcsI	RAATTY	5 cut(s)	858, 1676, 1789, 1875, 2017
AcuI	CTGAAG	4 cut(s)	956, 2547, 2618, 2736
AcvI	CACGTG	1 cut(s)	2381
AcyI	GRCGYC	2 cut(s)	185, 302
AfaI	GTAC	5 cut(s)	717, 1233, 1311, 2508, 2883
AfiI	CCNNNNNNNGG	4 cut(s)	154, 570, 1058, 2948
AflII	CTTAAG	1 cut(s)	692
AflIII	ACRYGT	2 cut(s)	2010, 2378
AjnI	CCWGG	5 cut(s)	1162, 1689, 2202, 2884, 2988
Alw21I	GWGCWC	1 cut(s)	1582
Alw26I	GTCTC	4 cut(s)	198, 1161, 2843, 2917
AlwI	GGATC	5 cut(s)	323, 836, 1836, 1849, 2114
Ama87I	CYCGRG	2 cut(s)	423, 1560
AoxI	GGCC	8 cut(s)	236, 286, 709, 1174, 2391, 2616, 2974, 2986
ApeKI	GCWGC	8 cut(s)	604, 818, 1406, 1655, 2594, 2723, 2777, 2930
ApoI	RAATTY	5 cut(s)	858, 1676, 1789, 1875, 2017
ArsI	GACNNNNNNTTYG	2 cut(s)	1920, 1952
AseI	ATTAAT	2 cut(s)	1517, 1740
Asp700I	GAANNNNTTC	3 cut(s)	365, 1132, 1185
AspLEI	GCGC	3 cut(s)	249, 1197, 2220
AspS9I	GGNCC	7 cut(s)	286, 764, 773, 1693, 2299, 2616, 2939
AsuHPI	GGTGA	6 cut(s)	41, 227, 653, 1291, 1304, 1952
AvaI	CYCGRG	2 cut(s)	423, 1560
AvaII	GGWCC	5 cut(s)	764, 773, 1693, 2299, 2939
BaeGI	GKGCMC	1 cut(s)	2900
BaeI	ACNNNNGTAYC	2 cut(s)	987, 1020
BalI	TGGCCA	1 cut(s)	2988
BamHI	GGATCC	1 cut(s)	1841
BanI	GGYRCC	1 cut(s)	2581
BanII	GRGCYC	1 cut(s)	1048
BauI	CACGAG	1 cut(s)	2568
BbrPI	CACGTG	1 cut(s)	2381
BbsI	GAAGAC	1 cut(s)	1376
Bbv12I	GWGCWC	1 cut(s)	1582
BbvI	GCAGC	8 cut(s)	591, 805, 1393, 1642, 2581, 2710, 2789, 2942
BceAI	ACGGC	1 cut(s)	1189
BcgI	CGANNNNNNTGC	2 cut(s)	2032, 2066
BciT130I	CCWGG	5 cut(s)	1164, 1691, 2204, 2886, 2990
BcoDI	GTCTC	4 cut(s)	198, 1161, 2843, 2917
BfaI	CTAG	3 cut(s)	120, 306, 678
BfmI	CTRYAG	1 cut(s)	160
BfrI	CTTAAG	1 cut(s)	692
BfuAI	ACCTGC	3 cut(s)	712, 857, 2009
BglI	GCCNNNNNGGC	1 cut(s)	2624
BlpI	GCTNAGC	2 cut(s)	924, 1800
Bme1390I	CCNGG	5 cut(s)	1164, 1691, 2204, 2886, 2990
Bme18I	GGWCC	5 cut(s)	764, 773, 1693, 2299, 2939
BmeT110I	CYCGRG	2 cut(s)	423, 1560
BmgT120I	GGNCC	7 cut(s)	286, 764, 773, 1693, 2299, 2616, 2939
BmiI	GGNNCC	7 cut(s)	765, 866, 1047, 1688, 1843, 2583, 2940
BmrFI	CCNGG	5 cut(s)	1164, 1691, 2204, 2886, 2990
BmrI	ACTGGG	4 cut(s)	948, 1836, 2258, 2820
BmuI	ACTGGG	4 cut(s)	948, 1836, 2258, 2820
BpiI	GAAGAC	1 cut(s)	1376
BpmI	CTGGAG	2 cut(s)	1935, 2561
Bpu10I	CCTNAGC	3 cut(s)	1410, 2190, 2424
Bpu1102I	GCTNAGC	2 cut(s)	924, 1800
BpuEI	CTTGAG	1 cut(s)	2516
Bsa29I	ATCGAT	1 cut(s)	616
BsaAI	YACGTR	1 cut(s)	2381
BsaHI	GRCGYC	2 cut(s)	185, 302
BsaI	GGTCTC	3 cut(s)	1161, 2843, 2917
BsaJI	CCNNGG	7 cut(s)	153, 204, 2202, 2520, 2829, 2885, 2989
BsaXI	ACNNNNNCTCC	6 cut(s)	161, 191, 1030, 1060, 1875, 1905
Bsc4I	CCNNNNNNNGG	4 cut(s)	154, 570, 1058, 2948
Bse118I	RCCGGY	2 cut(s)	238, 707
Bse1I	ACTGG	7 cut(s)	364, 943, 1729, 1831, 2114, 2264, 2815
Bse3DI	GCAATG	6 cut(s)	1143, 1174, 1634, 1765, 1873, 1983
BseBI	CCWGG	5 cut(s)	1164, 1691, 2204, 2886, 2990
BseCI	ATCGAT	1 cut(s)	616
BseDI	CCNNGG	7 cut(s)	153, 204, 2202, 2520, 2829, 2885, 2989
BseLI	CCNNNNNNNGG	4 cut(s)	154, 570, 1058, 2948
BseMI	GCAATG	6 cut(s)	1143, 1174, 1634, 1765, 1873, 1983
BseNI	ACTGG	7 cut(s)	364, 943, 1729, 1831, 2114, 2264, 2815
BseRI	GAGGAG	5 cut(s)	19, 104, 119, 1364, 2426
BseSI	GKGCMC	1 cut(s)	2900
BseX3I	CGGCCG	1 cut(s)	1174
BseXI	GCAGC	8 cut(s)	591, 805, 1393, 1642, 2581, 2710, 2789, 2942
BsgI	GTGCAG	1 cut(s)	1987
Bsh1236I	CGCG	4 cut(s)	155, 182, 249, 1179
Bsh1285I	CGRYCG	1 cut(s)	1177
BshFI	GGCC	8 cut(s)	238, 288, 711, 1176, 2393, 2618, 2976, 2988
BshNI	GGYRCC	1 cut(s)	2581
BshVI	ATCGAT	1 cut(s)	616
BsiEI	CGRYCG	1 cut(s)	1177
BsiHKAI	GWGCWC	1 cut(s)	1582
BsiHKCI	CYCGRG	2 cut(s)	423, 1560
BsiSI	CCGG	2 cut(s)	239, 708
BslFI	GGGAC	5 cut(s)	269, 400, 1475, 2374, 2903
BslI	CCNNNNNNNGG	4 cut(s)	154, 570, 1058, 2948
BsmAI	GTCTC	4 cut(s)	198, 1161, 2843, 2917
BsmBI	CGTCTC	1 cut(s)	198
BsmFI	GGGAC	5 cut(s)	269, 400, 1475, 2374, 2903
BsmI	GAATGC	3 cut(s)	1197, 2692, 2826
BsnI	GGCC	8 cut(s)	238, 288, 711, 1176, 2393, 2618, 2976, 2988
Bso31I	GGTCTC	3 cut(s)	1161, 2843, 2917
BsoBI	CYCGRG	2 cut(s)	423, 1560
Bsp1286I	GDGCHC	3 cut(s)	1048, 1582, 2900
Bsp143I	GATC	9 cut(s)	328, 472, 613, 841, 1117, 1568, 1841, 2119, 2805
Bsp1720I	GCTNAGC	2 cut(s)	924, 1800
Bsp19I	CCATGG	2 cut(s)	204, 2829
BspANI	GGCC	8 cut(s)	238, 288, 711, 1176, 2393, 2618, 2976, 2988
BspDI	ATCGAT	1 cut(s)	616
BspFNI	CGCG	4 cut(s)	155, 182, 249, 1179
BspLI	GGNNCC	7 cut(s)	765, 866, 1047, 1688, 1843, 2583, 2940
BspMI	ACCTGC	3 cut(s)	712, 857, 2009
BspPI	GGATC	5 cut(s)	323, 836, 1836, 1849, 2114
BspT107I	GGYRCC	1 cut(s)	2581
BspTI	CTTAAG	1 cut(s)	692
BspTNI	GGTCTC	3 cut(s)	1161, 2843, 2917
BsrBI	CCGCTC	2 cut(s)	112, 916
BsrDI	GCAATG	6 cut(s)	1143, 1174, 1634, 1765, 1873, 1983
BsrFI	RCCGGY	2 cut(s)	238, 707
BsrI	ACTGG	7 cut(s)	364, 943, 1729, 1831, 2114, 2264, 2815
BssAI	RCCGGY	2 cut(s)	238, 707
BssECI	CCNNGG	7 cut(s)	153, 204, 2202, 2520, 2829, 2885, 2989
BssMI	GATC	9 cut(s)	328, 472, 613, 841, 1117, 1568, 1841, 2119, 2805
BssNI	GRCGYC	2 cut(s)	185, 302
BssSI	CACGAG	1 cut(s)	2568
BssT1I	CCWWGG	3 cut(s)	204, 2520, 2829
Bst2BI	CACGAG	1 cut(s)	2568
Bst2UI	CCWGG	5 cut(s)	1164, 1691, 2204, 2886, 2990
Bst4CI	ACNGT	3 cut(s)	1285, 2129, 2747
BstACI	GRCGYC	2 cut(s)	185, 302
BstAFI	CTTAAG	1 cut(s)	692
BstBAI	YACGTR	1 cut(s)	2381
BstDSI	CCRYGG	3 cut(s)	153, 204, 2829
BstFNI	CGCG	4 cut(s)	155, 182, 249, 1179
BstHHI	GCGC	3 cut(s)	249, 1197, 2220
BstKTI	GATC	9 cut(s)	331, 475, 616, 844, 1120, 1571, 1844, 2122, 2808
BstMAI	GTCTC	4 cut(s)	198, 1161, 2843, 2917
BstMBI	GATC	9 cut(s)	328, 472, 613, 841, 1117, 1568, 1841, 2119, 2805
BstMCI	CGRYCG	1 cut(s)	1177
BstNI	CCWGG	5 cut(s)	1164, 1691, 2204, 2886, 2990
BstNSI	RCATGY	3 cut(s)	432, 932, 2014
BstSCI	CCNGG	5 cut(s)	1162, 1689, 2202, 2884, 2988
BstSFI	CTRYAG	1 cut(s)	160
BstSLI	GKGCMC	1 cut(s)	2900
BstUI	CGCG	4 cut(s)	155, 182, 249, 1179
BstV1I	GCAGC	8 cut(s)	591, 805, 1393, 1642, 2581, 2710, 2789, 2942
BstV2I	GAAGAC	1 cut(s)	1376
BstX2I	RGATCY	2 cut(s)	1841, 2119
BstXI	CCANNNNNNTGG	1 cut(s)	382
BstYI	RGATCY	2 cut(s)	1841, 2119
BstZI	CGGCCG	1 cut(s)	1174
Bsu15I	ATCGAT	1 cut(s)	616
BsuRI	GGCC	8 cut(s)	238, 288, 711, 1176, 2393, 2618, 2976, 2988
BsuTUI	ATCGAT	1 cut(s)	616
BtgI	CCRYGG	3 cut(s)	153, 204, 2829
BtsIMutI	CAGTG	3 cut(s)	936, 1290, 2808
BveI	ACCTGC	3 cut(s)	712, 857, 2009
CfoI	GCGC	3 cut(s)	249, 1197, 2220
Cfr10I	RCCGGY	2 cut(s)	238, 707
Cfr13I	GGNCC	7 cut(s)	286, 764, 773, 1693, 2299, 2616, 2939
Cfr42I	CCGCGG	1 cut(s)	156
ClaI	ATCGAT	1 cut(s)	616
CseI	GACGC	2 cut(s)	238, 2505
Csp6I	GTAC	5 cut(s)	716, 1232, 1310, 2507, 2882
CspCI	CAANNNNNGTGG	2 cut(s)	616, 651
CviQI	GTAC	5 cut(s)	716, 1232, 1310, 2507, 2882
DpnI	GATC	9 cut(s)	330, 474, 615, 843, 1119, 1570, 1843, 2121, 2807
DpnII	GATC	9 cut(s)	328, 472, 613, 841, 1117, 1568, 1841, 2119, 2805
DraI	TTTAAA	1 cut(s)	1675
DrdI	GACNNNNNNGTC	2 cut(s)	190, 263
DseDI	GACNNNNNNGTC	2 cut(s)	190, 263
EaeI	YGGCCR	4 cut(s)	236, 709, 1174, 2986
EagI	CGGCCG	1 cut(s)	1174
EciI	GGCGGA	1 cut(s)	190
EclXI	CGGCCG	1 cut(s)	1174
Eco130I	CCWWGG	3 cut(s)	204, 2520, 2829
Eco147I	AGGCCT	1 cut(s)	2393
Eco24I	GRGCYC	1 cut(s)	1048
Eco31I	GGTCTC	3 cut(s)	1161, 2843, 2917
Eco47I	GGWCC	5 cut(s)	764, 773, 1693, 2299, 2939
Eco52I	CGGCCG	1 cut(s)	1174
Eco57I	CTGAAG	4 cut(s)	956, 2547, 2618, 2736
Eco72I	CACGTG	1 cut(s)	2381
Eco88I	CYCGRG	2 cut(s)	423, 1560
EcoO109I	RGGNCCY	3 cut(s)	764, 2299, 2939
EcoRII	CCWGG	5 cut(s)	1162, 1689, 2202, 2884, 2988
EcoT14I	CCWWGG	3 cut(s)	204, 2520, 2829
EcoT22I	ATGCAT	1 cut(s)	3004
EcoT38I	GRGCYC	1 cut(s)	1048
ErhI	CCWWGG	3 cut(s)	204, 2520, 2829
Esp3I	CGTCTC	1 cut(s)	198
FalI	AAGNNNNNCTT	4 cut(s)	946, 978, 2961, 2993
FaqI	GGGAC	5 cut(s)	269, 400, 1475, 2374, 2903
FauI	CCCGC	5 cut(s)	111, 148, 202, 452, 2833
FblI	GTMKAC	4 cut(s)	1083, 1269, 1784, 2052
FriOI	GRGCYC	1 cut(s)	1048
FspBI	CTAG	3 cut(s)	120, 306, 678
GlaI	GCGC	3 cut(s)	248, 1196, 2219
GsuI	CTGGAG	2 cut(s)	1935, 2561
HaeIII	GGCC	8 cut(s)	238, 288, 711, 1176, 2393, 2618, 2976, 2988
HapII	CCGG	2 cut(s)	239, 708
HgaI	GACGC	2 cut(s)	238, 2505
HhaI	GCGC	3 cut(s)	249, 1197, 2220
Hin1I	GRCGYC	2 cut(s)	185, 302
Hin6I	GCGC	3 cut(s)	247, 1195, 2218
HinP1I	GCGC	3 cut(s)	247, 1195, 2218
HincII	GTYRAC	5 cut(s)	832, 934, 1963, 2053, 2925
HindII	GTYRAC	5 cut(s)	832, 934, 1963, 2053, 2925
HindIII	AAGCTT	3 cut(s)	2533, 2739, 2862
HinfI	GANTC	8 cut(s)	12, 218, 421, 1395, 1489, 1781, 2144, 2576
HpaII	CCGG	2 cut(s)	239, 708
HphI	GGTGA	6 cut(s)	41, 227, 653, 1291, 1304, 1952
Hpy99I	CGWCG	4 cut(s)	187, 317, 1209, 3037
HpyCH4III	ACNGT	3 cut(s)	1285, 2129, 2747
HpyCH4IV	ACGT	4 cut(s)	185, 302, 2380, 2505
HpySE526I	ACGT	4 cut(s)	185, 302, 2380, 2505
Hsp92I	GRCGYC	2 cut(s)	185, 302
HspAI	GCGC	3 cut(s)	247, 1195, 2218
KroI	GCCGGC	2 cut(s)	238, 707
KroNI	GCCGGC	2 cut(s)	240, 709
KspI	CCGCGG	1 cut(s)	156
Kzo9I	GATC	9 cut(s)	328, 472, 613, 841, 1117, 1568, 1841, 2119, 2805
LmnI	GCTCC	7 cut(s)	94, 117, 128, 580, 667, 921, 1051
Lsp1109I	GCAGC	8 cut(s)	591, 805, 1393, 1642, 2581, 2710, 2789, 2942
MaeI	CTAG	3 cut(s)	120, 306, 678
MaeII	ACGT	4 cut(s)	185, 302, 2380, 2505
MaeIII	GTNAC	5 cut(s)	1279, 1830, 1940, 2449, 2490
MalI	GATC	9 cut(s)	330, 474, 615, 843, 1119, 1570, 1843, 2121, 2807
MbiI	CCGCTC	2 cut(s)	112, 916
MboI	GATC	9 cut(s)	328, 472, 613, 841, 1117, 1568, 1841, 2119, 2805
MboII	GAAGA	9 cut(s)	286, 623, 1193, 1367, 1381, 2148, 2557, 2815, 2964
MfeI	CAATTG	3 cut(s)	529, 2148, 2475
MflI	RGATCY	2 cut(s)	1841, 2119
MhlI	GDGCHC	3 cut(s)	1048, 1582, 2900
MlsI	TGGCCA	1 cut(s)	2988
MluNI	TGGCCA	1 cut(s)	2988
MlyI	GAGTC	4 cut(s)	415, 1483, 1790, 2570
MmeI	TCCRAC	2 cut(s)	1093, 2886
Mox20I	TGGCCA	1 cut(s)	2988
Mph1103I	ATGCAT	1 cut(s)	3004
MroNI	GCCGGC	2 cut(s)	238, 707
MroXI	GAANNNNTTC	3 cut(s)	365, 1132, 1185
MscI	TGGCCA	1 cut(s)	2988
MseI	TTAA	7 cut(s)	693, 959, 1517, 1674, 1740, 2231, 2645
MslI	CAYNNNNRTG	5 cut(s)	941, 1277, 1701, 2009, 2813
Msp20I	TGGCCA	1 cut(s)	2988
MspA1I	CMGCKG	3 cut(s)	155, 2171, 2594
MspCI	CTTAAG	1 cut(s)	692
MspI	CCGG	2 cut(s)	239, 708
MspR9I	CCNGG	5 cut(s)	1164, 1691, 2204, 2886, 2990
MunI	CAATTG	3 cut(s)	529, 2148, 2475
Mva1269I	GAATGC	3 cut(s)	1197, 2692, 2826
MvaI	CCWGG	5 cut(s)	1164, 1691, 2204, 2886, 2990
MvnI	CGCG	4 cut(s)	155, 182, 249, 1179
NaeI	GCCGGC	2 cut(s)	240, 709
NcoI	CCATGG	2 cut(s)	204, 2829
NdeII	GATC	9 cut(s)	328, 472, 613, 841, 1117, 1568, 1841, 2119, 2805
NgoMIV	GCCGGC	2 cut(s)	238, 707
NlaIV	GGNNCC	7 cut(s)	765, 866, 1047, 1688, 1843, 2583, 2940
NmeAIII	GCCGAG	2 cut(s)	504, 2558
NmuCI	GTSAC	5 cut(s)	1279, 1830, 1940, 2449, 2490
NsiI	ATGCAT	1 cut(s)	3004
NspI	RCATGY	3 cut(s)	432, 932, 2014
PaeI	GCATGC	1 cut(s)	432
PaeR7I	CTCGAG	2 cut(s)	423, 1560
PceI	AGGCCT	1 cut(s)	2393
PciI	ACATGT	1 cut(s)	2010
PctI	GAATGC	3 cut(s)	1197, 2692, 2826
PdiI	GCCGGC	2 cut(s)	240, 709
PdmI	GAANNNNTTC	3 cut(s)	365, 1132, 1185
PfeI	GAWTC	4 cut(s)	12, 218, 1395, 2144
PflMI	CCANNNNNTGG	2 cut(s)	570, 1058
PleI	GAGTC	4 cut(s)	415, 1483, 1789, 2570
PmaCI	CACGTG	1 cut(s)	2381
PmlI	CACGTG	1 cut(s)	2381
PpsI	GAGTC	4 cut(s)	415, 1483, 1789, 2570
Ppu21I	YACGTR	1 cut(s)	2381
PpuMI	RGGWCCY	3 cut(s)	764, 2299, 2939
PscI	ACATGT	1 cut(s)	2010
PshBI	ATTAAT	2 cut(s)	1517, 1740
PsiI	TTATAA	1 cut(s)	600
Psp5II	RGGWCCY	3 cut(s)	764, 2299, 2939
Psp6I	CCWGG	5 cut(s)	1162, 1689, 2202, 2884, 2988
PspCI	CACGTG	1 cut(s)	2381
PspGI	CCWGG	5 cut(s)	1162, 1689, 2202, 2884, 2988
PspN4I	GGNNCC	7 cut(s)	765, 866, 1047, 1688, 1843, 2583, 2940
PspPI	GGNCC	7 cut(s)	286, 764, 773, 1693, 2299, 2616, 2939
PspPPI	RGGWCCY	3 cut(s)	764, 2299, 2939
PspXI	VCTCGAGB	1 cut(s)	423
PsuI	RGATCY	2 cut(s)	1841, 2119
PvuII	CAGCTG	2 cut(s)	2171, 2594
RsaI	GTAC	5 cut(s)	717, 1233, 1311, 2508, 2883
RsaNI	GTAC	5 cut(s)	716, 1232, 1310, 2507, 2882
RseI	CAYNNNNRTG	5 cut(s)	941, 1277, 1701, 2009, 2813
SacII	CCGCGG	1 cut(s)	156
SalI	GTCGAC	1 cut(s)	2051
SaqAI	TTAA	7 cut(s)	693, 959, 1517, 1674, 1740, 2231, 2645
Sau3AI	GATC	9 cut(s)	328, 472, 613, 841, 1117, 1568, 1841, 2119, 2805
Sau96I	GGNCC	7 cut(s)	286, 764, 773, 1693, 2299, 2616, 2939
SchI	GAGTC	4 cut(s)	415, 1483, 1790, 2570
ScrFI	CCNGG	5 cut(s)	1164, 1691, 2204, 2886, 2990
SduI	GDGCHC	3 cut(s)	1048, 1582, 2900
SfcI	CTRYAG	1 cut(s)	160
Sfr274I	CTCGAG	2 cut(s)	423, 1560
Sfr303I	CCGCGG	1 cut(s)	156
SgrBI	CCGCGG	1 cut(s)	156
SinI	GGWCC	5 cut(s)	764, 773, 1693, 2299, 2939
SlaI	CTCGAG	2 cut(s)	423, 1560
SmiMI	CAYNNNNRTG	5 cut(s)	941, 1277, 1701, 2009, 2813
SmlI	CTYRAG	4 cut(s)	423, 692, 1560, 2495
SmoI	CTYRAG	4 cut(s)	423, 692, 1560, 2495
SphI	GCATGC	1 cut(s)	432
SseBI	AGGCCT	1 cut(s)	2393
SspMI	CTAG	3 cut(s)	120, 306, 678
StuI	AGGCCT	1 cut(s)	2393
StyD4I	CCNGG	5 cut(s)	1162, 1689, 2202, 2884, 2988
StyI	CCWWGG	3 cut(s)	204, 2520, 2829
TaaI	ACNGT	3 cut(s)	1285, 2129, 2747
TaiI	ACGT	4 cut(s)	188, 305, 2383, 2508
TaqI	TCGA	6 cut(s)	276, 424, 477, 616, 1561, 2052
TaqII	GACCGA	1 cut(s)	2478
TatI	WGTACW	2 cut(s)	715, 1231
TauI	GCSGC	5 cut(s)	109, 112, 155, 1179, 2783
TfiI	GAWTC	4 cut(s)	12, 218, 1395, 2144
Tru1I	TTAA	7 cut(s)	693, 959, 1517, 1674, 1740, 2231, 2645
Tru9I	TTAA	7 cut(s)	693, 959, 1517, 1674, 1740, 2231, 2645
TscAI	CASTG	3 cut(s)	943, 1290, 2815
TseFI	GTSAC	5 cut(s)	1279, 1830, 1940, 2449, 2490
TseI	GCWGC	8 cut(s)	604, 818, 1406, 1655, 2594, 2723, 2777, 2930
Tsp45I	GTSAC	5 cut(s)	1279, 1830, 1940, 2449, 2490
TspDTI	ATGAA	9 cut(s)	86, 374, 687, 997, 1125, 1335, 1713, 1776, 2526
TspGWI	ACGGA	3 cut(s)	5, 2449, 2858
TspRI	CASTG	3 cut(s)	943, 1290, 2815
Van91I	CCANNNNNTGG	2 cut(s)	570, 1058
Vha464I	CTTAAG	1 cut(s)	692
VpaK11BI	GGWCC	5 cut(s)	764, 773, 1693, 2299, 2939
VspI	ATTAAT	2 cut(s)	1517, 1740
XapI	RAATTY	5 cut(s)	858, 1676, 1789, 1875, 2017
XceI	RCATGY	3 cut(s)	432, 932, 2014
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2762
XhoI	CTCGAG	2 cut(s)	423, 1560
XmiI	GTMKAC	4 cut(s)	1083, 1269, 1784, 2052
XmnI	GAANNNNTTC	3 cut(s)	365, 1132, 1185
XspI	CTAG	3 cut(s)	120, 306, 678
ZraI	GACGTC	2 cut(s)	186, 303
Zsp2I	ATGCAT	1 cut(s)	3004

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.