Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0005582

Physical Location & Seq

Genomic Coordinates Reverse (-)

2180854 .. 2187229

Gene Structure 6376 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g03731.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGGCGAACAATACCACAGTAACATGTCCATCTCCCATGAAAGCAACATCCAATGGAGTCTTCCAGGGTGATAATCCTCTGCACTATGCGCTCCCTCTTGTCATCTTGCAAATATGTATCGTGGTTACACTCACGCGAATTCTTGCTTATTTTCTTCGGCCACTAAGACAGCCTCGTGTGATTGCAGAGATTATTGGAGGAATCTTGCTTGGCCCTTCAGCTCTTGGTCACAACAAAGACTATATCAACGCAATTTTCCCAGCAAAAAGTCTTACGGTGCTTGATACTATAGCAAATCTTGGTCTTCTCTTCTTTCTGTTCCTAGTGGGTTTGGAGTTAGATCCGAAGTCCCTCCGGCGGACTGGAAAGAAAGCTCTCAGCATAGCTCTTGCAGGAATCACTTTGCCTTTTGTATTAGGAATTGGTACATCATTTGTCCTAAAAGAAACCATTTCTAAAGGTGTAGATGGAGCCCCATTTCTTGTCTTCATGGGAGTGGCTCTTTCTATAACTGCCTTCCCTGTTTTGGCCCGTATTTTGGCTGAGCTTAAGCTCTTAACCACTGATGTTGGACGAATGGCCATGTCAGCGGCAGCTGTTAATGATGTGGCTGCATGGATTCTTCTTGCTCTCGCCATTTCCCTCTCTGGTAGTGGCCGGTCTCCCCTGGTTTCACTATGGGTTTTTTTGTGTGGATGTGCTTTTGTTCTTGTATGTATATTTGCTGTTCGACCTCTCTTTAAATGGATGGTGCAGCGTTGTCCTGAGGGTGAACCAGTAGACGAATTGTATGTGTGTGGGACTTTGGTTGCAGTTTTGGCAGCTGGGTTTGTCACTGATACTATTGGAATTCATGCTCTATTCGGTGCATTTGTGCTTGGAATTATTGTTCCAAAGGAAGGACCGTTTGCAGGTGCCCTTGTAGAAAAAGTTGAGGATCTTGTATCTGGTCTATTCCTCCCATTGTACTTTGTCTCAAGTGGATTAAAGACTGATGTAACAACAATTCGTGGCGCGCAGTCATGGGGTCTCTTAGTCTTGGTCATTTCAACAGCCTGCTTTGGAAAGGTCATTGGCACTATAGTTGTTTCCCTCTTCTGCAAAGTACCCCTTCAGGAAGCTCTAGCCCTGGGGTTCCTCATGAATACCAAAGGGTTGGTGGAACTCATTGTCCTTAACATTGGTAGAGACAGAGGGGTCTTGAATGATCAAACATTTGCTATCATGGTTCTCATGGCTGTCTTCACAACCTTCATCACAACGCCTGTAGTTATGGCAGTATATAAGCCAGCTAAAAGGTTGAGTAAAGATTACAAGTACAGAACTATTGAGAGGAAAGACCTAAATAGTCAGCTCCGACTCTTGACCTGTTTCCACGGTACAAGGAACCTTCCCACGATGATTAATCTCATCGAGGCTTCCCGTGGGACTGAAAAAAGGGAGCGGCTTTGTGTCTATGCAATGCACCTTCTGGAGCTTAACGAAAGGCCTTCCGCAATATTGATGGTTCACAAGGCAAGAAACAATGGTATACCCTTTTGGAATAAAGGGCAGCATTCAGGTGATAATCAAGTTGTTGTGGCTTTTGAGACCTTTGAGCAGCTGAGTCGAGTGGCTATACGTCCAATGACAGCAATCTCTGCTGTAACTACCATGCATGAGGACATCTGCACAAGTGCTGACAGTGAAAGAGCAGCAATGATAATCCTCCCATTCCACAAGCACCAGAGGTTGGATGGTACCTTTGAGACAGCTCGAAGTGAGTACAGATTGATTAACCAACAGGTTCTTGAGAATGCACCATGTTCAGTAGGGATCATAGTGGACCGTGGTCTAGGTGGAAGCACCCATGTATCTGCCAGCAATCTTGATTCAGTTGTAACTGTTCTGTTCTTTGGGGGTAGTGATGATCGTGAGGCTCTTGCTTATGGGATTCGAATGGTTGAGCATCCTGGTATCACCTTAAATATCATTCACTTCTTACCAAGCGCGGAGCTTCAGGGAGAAATTGTTAGAGTTGATGTAAACGATGATTCAAACACTTCAGCAGGGCCAACGGAGGACACGTTCATTGCTGAACTGAAGCTCAAGATTTTGAGTTACAGCTCAATCAAGTATGAGGAGAGAGTAGTGGGAAATGCTGCAGAAACTACTGCATTGATTCGTGAGTTTAGCCAATGTAACTTGTTTTTGGTTGGTCGAAGGCCTCAGGGTCCAATCGCTGCTTCCTTGAATGTGAAGGGTGACTGCCCCGAATTGGGGCCTGTTGGGAGCTTGTTGATCTATCCGGACTTCAGTACCACTGCATCAGTGTTAGTAGTGCAGCAGTATCATGGGCTCAAGTTGCCAAACTCATCAGTCGGTTTGTCTAAGGTAGTCGTGTTGCCTGAGGAAGAATCAGAAATCAGCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005783 GO:0006605 GO:0006623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015672 GO:0015833 GO:0031410 GO:0031982 GO:0033036 GO:0033365 GO:0034613 GO:0042592 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

805

Amino Acids

87.16

Weight (kDa)

7.53

Isoelectric Point (pI)

35.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	47 - 423	1.5e-66	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	480 - 622	3.2e-47	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	627 - 779	1.1e-33	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005582)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23700 AT4G23700
fragaria_vesca	FvH4_5g03731 FvH4_5g03731
malus_domestica	MD00G1094100.v1.1 MD06G1097000.v1.1
prunus_persica	Prupe.5G111700_v2.0.a1 Prupe.5G111700_v2.0.a1 Prupe.5G111700_v2.0.a1 Prupe.5G111700_v2.0.a1 Prupe.5G111700_v2.0.a1 Prupe.5G111700_v2.0.a1
pyrus_communis	pycom06g09310
rosa_chinensis	RchiOBHm_Chr7g0195971
rosa_laevigata	RLG00000004078
rosa_multiflora	Rmu_co8262837.1_g000001 Rmu_sc0004016.1_g000001 Rmu_ssc0000453.1_g000003
rosa_roxburghii	Rroxscaffold_3G00259980
rosa_rugosa	Rorug07G0027700 Rorug07G0027900 Rorug07G0028000 Rorug07G0028100
rosa_samantha	Rh7AG155200 Rh7BG157100 Rh7CG160600 Rh7DG156100
rosa_wichuraiana	Rw7G013270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	902
AasI	GACNNNNNNGTC	1 cut(s)	1196
Acc36I	ACCTGC	1 cut(s)	902
Acc65I	GGTACC	1 cut(s)	1739
AccB1I	GGYRCC	2 cut(s)	914, 1739
AccB7I	CCANNNNNTGG	1 cut(s)	1732
AccBSI	CCGCTC	1 cut(s)	1444
AccI	GTMKAC	2 cut(s)	780, 1531
AccII	CGCG	3 cut(s)	136, 1016, 1991
AccIII	TCCGGA	1 cut(s)	2287
AciI	CCGC	5 cut(s)	358, 590, 1444, 1494, 1991
AclWI	GGATC	3 cut(s)	335, 945, 1823
AcoI	YGGCCR	3 cut(s)	158, 579, 655
AcsI	RAATTY	2 cut(s)	138, 849
AcuI	CTGAAG	6 cut(s)	201, 1097, 1982, 2028, 2102, 2278
AfaI	GTAC	8 cut(s)	427, 968, 1107, 1319, 1381, 1741, 1766, 2299
AfiI	CCNNNNNNNGG	9 cut(s)	357, 526, 538, 899, 911, 1732, 2257, 2258, 2259
AflII	CTTAAG	1 cut(s)	548
AflIII	ACRYGT	2 cut(s)	23, 2064
AgsI	TTSAA	4 cut(s)	1050, 1204, 2037, 2233
AjnI	CCWGG	4 cut(s)	63, 666, 1128, 1951
AjuI	GAANNNNNNNTTGG	4 cut(s)	44, 76, 2209, 2241
AloI	GAACNNNNNNTCC	6 cut(s)	873, 905, 1155, 1187, 2051, 2083
Alw26I	GTCTC	6 cut(s)	666, 979, 1034, 1182, 1583, 1742
AlwI	GGATC	3 cut(s)	335, 945, 1823
Aor13HI	TCCGGA	1 cut(s)	2287
AoxI	GGCC	9 cut(s)	158, 211, 528, 579, 655, 1487, 2051, 2204, 2261
ApoI	RAATTY	2 cut(s)	138, 849
AseI	ATTAAT	1 cut(s)	1404
Asp718I	GGTACC	1 cut(s)	1739
AspLEI	GCGC	4 cut(s)	91, 1016, 1018, 1991
AspS9I	GGNCC	7 cut(s)	212, 529, 902, 1825, 2051, 2213, 2261
AsuHPI	GGTGA	5 cut(s)	80, 782, 1574, 1951, 2255
AsuII	TTCGAA	1 cut(s)	1936
AvaII	GGWCC	3 cut(s)	902, 1825, 2213
AxyI	CCTNAGG	3 cut(s)	765, 2208, 2388
BaeGI	GKGCMC	1 cut(s)	919
BaeI	ACNNNNGTAYC	4 cut(s)	1836, 1869, 2281, 2314
BalI	TGGCCA	1 cut(s)	581
BanI	GGYRCC	2 cut(s)	914, 1739
BanII	GRGCYC	2 cut(s)	475, 2340
BauI	CACGAG	1 cut(s)	174
BbsI	GAAGAC	4 cut(s)	52, 296, 478, 1234
BccI	CCATC	5 cut(s)	37, 461, 742, 1498, 1730
BcgI	CGANNNNNNTGC	2 cut(s)	1589, 1623
BciT130I	CCWGG	4 cut(s)	65, 668, 1130, 1953
BclI	TGATCA	1 cut(s)	1207
BcoDI	GTCTC	6 cut(s)	666, 979, 1034, 1182, 1583, 1742
BfaI	CTAG	3 cut(s)	323, 1124, 1835
BfmI	CTRYAG	4 cut(s)	288, 1080, 1266, 2142
BfrI	CTTAAG	1 cut(s)	548
BfuAI	ACCTGC	1 cut(s)	902
BlpI	GCTNAGC	1 cut(s)	543
Bme1390I	CCNGG	4 cut(s)	65, 668, 1130, 1953
Bme18I	GGWCC	3 cut(s)	902, 1825, 2213
BmgT120I	GGNCC	7 cut(s)	212, 529, 902, 1825, 2051, 2213, 2261
BmiI	GGNNCC	7 cut(s)	472, 916, 1136, 1388, 1741, 2214, 2262
BmrFI	CCNGG	4 cut(s)	65, 668, 1130, 1953
BmsI	GCATC	2 cut(s)	1957, 2315
BoxI	GACNNNNGTC	1 cut(s)	1830
BpiI	GAAGAC	4 cut(s)	52, 296, 478, 1234
BpmI	CTGGAG	1 cut(s)	1493
Bpu1102I	GCTNAGC	1 cut(s)	543
Bpu14I	TTCGAA	1 cut(s)	1936
BpuEI	CTTGAG	4 cut(s)	961, 1811, 2072, 2324
BsaI	GGTCTC	3 cut(s)	666, 1034, 1583
BsaJI	CCNNGG	7 cut(s)	64, 666, 1128, 1129, 1375, 1423, 1828
BsaWI	WCCGGW	1 cut(s)	2287
BsaXI	ACNNNNNCTCC	4 cut(s)	1995, 2025, 2051, 2081
Bsc4I	CCNNNNNNNGG	9 cut(s)	357, 526, 538, 899, 911, 1732, 2257, 2258, 2259
Bse118I	RCCGGY	1 cut(s)	657
Bse1I	ACTGG	2 cut(s)	367, 776
Bse21I	CCTNAGG	3 cut(s)	765, 2208, 2388
Bse3DI	GCAATG	3 cut(s)	1467, 1704, 2070
BseAI	TCCGGA	1 cut(s)	2287
BseBI	CCWGG	4 cut(s)	65, 668, 1130, 1953
BseDI	CCNNGG	7 cut(s)	64, 666, 1128, 1129, 1375, 1423, 1828
BseGI	GGATG	5 cut(s)	47, 701, 753, 1741, 1948
BseLI	CCNNNNNNNGG	9 cut(s)	357, 526, 538, 899, 911, 1732, 2257, 2258, 2259
BseMI	GCAATG	3 cut(s)	1467, 1704, 2070
BseMII	CTCAG	6 cut(s)	391, 534, 756, 1595, 2222, 2379
BseNI	ACTGG	2 cut(s)	367, 776
BsePI	GCGCGC	1 cut(s)	1014
BseRI	GAGGAG	1 cut(s)	2135
BseSI	GKGCMC	1 cut(s)	919
BseYI	CCCAGC	2 cut(s)	259, 824
BsgI	GTGCAG	4 cut(s)	65, 773, 1654, 2342
Bsh1236I	CGCG	3 cut(s)	136, 1016, 1991
BshFI	GGCC	9 cut(s)	160, 213, 530, 581, 657, 1489, 2053, 2206, 2263
BshNI	GGYRCC	2 cut(s)	914, 1739
BsiSI	CCGG	3 cut(s)	355, 658, 2288
BslFI	GGGAC	3 cut(s)	334, 814, 1441
BslI	CCNNNNNNNGG	9 cut(s)	357, 526, 538, 899, 911, 1732, 2257, 2258, 2259
BsmAI	GTCTC	6 cut(s)	666, 979, 1034, 1182, 1583, 1742
BsmFI	GGGAC	3 cut(s)	334, 814, 1441
BsmI	GAATGC	2 cut(s)	1555, 1801
BsnI	GGCC	9 cut(s)	160, 213, 530, 581, 657, 1489, 2053, 2206, 2263
Bso31I	GGTCTC	3 cut(s)	666, 1034, 1583
Bsp119I	TTCGAA	1 cut(s)	1936
Bsp1286I	GDGCHC	3 cut(s)	475, 919, 2340
Bsp13I	TCCGGA	1 cut(s)	2287
Bsp143I	GATC	6 cut(s)	340, 937, 1207, 1815, 1909, 2280
Bsp1720I	GCTNAGC	1 cut(s)	543
BspACI	CCGC	5 cut(s)	358, 590, 1444, 1494, 1991
BspANI	GGCC	9 cut(s)	160, 213, 530, 581, 657, 1489, 2053, 2206, 2263
BspCNI	CTCAG	6 cut(s)	390, 535, 757, 1596, 2221, 2380
BspEI	TCCGGA	1 cut(s)	2287
BspFNI	CGCG	3 cut(s)	136, 1016, 1991
BspHI	TCATGA	1 cut(s)	1140
BspLI	GGNNCC	7 cut(s)	472, 916, 1136, 1388, 1741, 2214, 2262
BspMAI	CTGCAG	1 cut(s)	2146
BspMI	ACCTGC	1 cut(s)	902
BspPI	GGATC	3 cut(s)	335, 945, 1823
BspT104I	TTCGAA	1 cut(s)	1936
BspT107I	GGYRCC	2 cut(s)	914, 1739
BspTI	CTTAAG	1 cut(s)	548
BspTNI	GGTCTC	3 cut(s)	666, 1034, 1583
BsrBI	CCGCTC	1 cut(s)	1444
BsrDI	GCAATG	3 cut(s)	1467, 1704, 2070
BsrFI	RCCGGY	1 cut(s)	657
BsrI	ACTGG	2 cut(s)	367, 776
BssAI	RCCGGY	1 cut(s)	657
BssECI	CCNNGG	7 cut(s)	64, 666, 1128, 1129, 1375, 1423, 1828
BssHII	GCGCGC	1 cut(s)	1014
BssMI	GATC	6 cut(s)	340, 937, 1207, 1815, 1909, 2280
BssNAI	GTATAC	1 cut(s)	1532
BssSI	CACGAG	1 cut(s)	174
Bst1107I	GTATAC	1 cut(s)	1532
Bst2BI	CACGAG	1 cut(s)	174
Bst2UI	CCWGG	4 cut(s)	65, 668, 1130, 1953
Bst4CI	ACNGT	7 cut(s)	19, 277, 906, 1379, 1685, 1829, 1885
Bst6I	CTCTTC	2 cut(s)	314, 1100
BstAFI	CTTAAG	1 cut(s)	548
BstAPI	GCANNNNNTGC	1 cut(s)	1640
BstBI	TTCGAA	1 cut(s)	1936
BstC8I	GCNNGC	4 cut(s)	1016, 1057, 1290, 1861
BstDEI	CTNAG	9 cut(s)	164, 377, 543, 765, 1033, 1604, 2208, 2370, 2388
BstDSI	CCRYGG	3 cut(s)	1375, 1423, 1828
BstF5I	GGATG	5 cut(s)	47, 701, 753, 1741, 1948
BstFNI	CGCG	3 cut(s)	136, 1016, 1991
BstHHI	GCGC	4 cut(s)	91, 1016, 1018, 1991
BstKTI	GATC	6 cut(s)	343, 940, 1210, 1818, 1912, 2283
BstMAI	GTCTC	6 cut(s)	666, 979, 1034, 1182, 1583, 1742
BstMBI	GATC	6 cut(s)	340, 937, 1207, 1815, 1909, 2280
BstMWI	GCNNNNNNNGC	5 cut(s)	88, 587, 818, 1640, 2344
BstNI	CCWGG	4 cut(s)	65, 668, 1130, 1953
BstNSI	RCATGY	1 cut(s)	27
BstPAI	GACNNNNGTC	1 cut(s)	1830
BstSCI	CCNGG	4 cut(s)	63, 666, 1128, 1951
BstSFI	CTRYAG	4 cut(s)	288, 1080, 1266, 2142
BstSLI	GKGCMC	1 cut(s)	919
BstUI	CGCG	3 cut(s)	136, 1016, 1991
BstV2I	GAAGAC	4 cut(s)	52, 296, 478, 1234
BstX2I	RGATCY	2 cut(s)	340, 937
BstXI	CCANNNNNNTGG	1 cut(s)	1156
BstYI	RGATCY	2 cut(s)	340, 937
BstZ17I	GTATAC	1 cut(s)	1532
Bsu36I	CCTNAGG	3 cut(s)	765, 2208, 2388
BsuRI	GGCC	9 cut(s)	160, 213, 530, 581, 657, 1489, 2053, 2206, 2263
BtgI	CCRYGG	3 cut(s)	1375, 1423, 1828
BtsCI	GGATG	5 cut(s)	47, 701, 753, 1741, 1948
BtsI	GCAGTG	1 cut(s)	2301
BtsIMutI	CAGTG	5 cut(s)	561, 834, 1690, 2301, 2316
BveI	ACCTGC	1 cut(s)	902
Cac8I	GCNNGC	4 cut(s)	1016, 1057, 1290, 1861
CciI	TCATGA	1 cut(s)	1140
CfoI	GCGC	4 cut(s)	91, 1016, 1018, 1991
Cfr10I	RCCGGY	1 cut(s)	657
Cfr13I	GGNCC	7 cut(s)	212, 529, 902, 1825, 2051, 2213, 2261
Csp6I	GTAC	8 cut(s)	426, 967, 1106, 1318, 1380, 1740, 1765, 2298
CspCI	CAANNNNNGTGG	2 cut(s)	550, 585
CviQI	GTAC	8 cut(s)	426, 967, 1106, 1318, 1380, 1740, 1765, 2298
DdeI	CTNAG	9 cut(s)	164, 377, 543, 765, 1033, 1604, 2208, 2370, 2388
DpnI	GATC	6 cut(s)	342, 939, 1209, 1817, 1911, 2282
DpnII	GATC	6 cut(s)	340, 937, 1207, 1815, 1909, 2280
DraI	TTTAAA	1 cut(s)	742
DrdI	GACNNNNNNGTC	1 cut(s)	1196
DseDI	GACNNNNNNGTC	1 cut(s)	1196
EaeI	YGGCCR	3 cut(s)	158, 579, 655
Eam1104I	CTCTTC	2 cut(s)	314, 1100
EarI	CTCTTC	2 cut(s)	314, 1100
EciI	GGCGGA	1 cut(s)	373
Eco147I	AGGCCT	2 cut(s)	1489, 2206
Eco24I	GRGCYC	2 cut(s)	475, 2340
Eco31I	GGTCTC	3 cut(s)	666, 1034, 1583
Eco47I	GGWCC	3 cut(s)	902, 1825, 2213
Eco57I	CTGAAG	6 cut(s)	201, 1097, 1982, 2028, 2102, 2278
Eco81I	CCTNAGG	3 cut(s)	765, 2208, 2388
EcoO109I	RGGNCCY	1 cut(s)	2261
EcoRI	GAATTC	2 cut(s)	138, 849
EcoRII	CCWGG	4 cut(s)	63, 666, 1128, 1951
EcoT22I	ATGCAT	1 cut(s)	1659
EcoT38I	GRGCYC	2 cut(s)	475, 2340
FalI	AAGNNNNNCTT	2 cut(s)	1095, 1127
FaqI	GGGAC	3 cut(s)	334, 814, 1441
FbaI	TGATCA	1 cut(s)	1207
FblI	GTMKAC	2 cut(s)	780, 1531
FokI	GGATG	5 cut(s)	34, 708, 760, 1748, 1935
FriOI	GRGCYC	2 cut(s)	475, 2340
FspBI	CTAG	3 cut(s)	323, 1124, 1835
GlaI	GCGC	4 cut(s)	90, 1015, 1017, 1990
GsaI	CCCAGC	2 cut(s)	263, 828
GsuI	CTGGAG	1 cut(s)	1493
HaeIII	GGCC	9 cut(s)	160, 213, 530, 581, 657, 1489, 2053, 2206, 2263
HapII	CCGG	3 cut(s)	355, 658, 2288
HhaI	GCGC	4 cut(s)	91, 1016, 1018, 1991
Hin6I	GCGC	4 cut(s)	89, 1014, 1016, 1989
HinP1I	GCGC	4 cut(s)	89, 1014, 1016, 1989
HpaII	CCGG	3 cut(s)	355, 658, 2288
HphI	GGTGA	5 cut(s)	80, 782, 1574, 1951, 2255
Hpy166II	GTNNAC	6 cut(s)	773, 781, 1510, 1532, 1825, 2026
Hpy188I	TCNGA	3 cut(s)	345, 1358, 2401
Hpy8I	GTNNAC	6 cut(s)	773, 781, 1510, 1532, 1825, 2026
HpyCH4III	ACNGT	7 cut(s)	19, 277, 906, 1379, 1685, 1829, 1885
HpyCH4IV	ACGT	2 cut(s)	1621, 2066
HpyF10VI	GCNNNNNNNGC	5 cut(s)	88, 587, 818, 1640, 2344
HpyF3I	CTNAG	9 cut(s)	164, 377, 543, 765, 1033, 1604, 2208, 2370, 2388
HpySE526I	ACGT	2 cut(s)	1621, 2066
HspAI	GCGC	4 cut(s)	89, 1014, 1016, 1989
Kpn2I	TCCGGA	1 cut(s)	2287
KpnI	GGTACC	1 cut(s)	1743
Ksp22I	TGATCA	1 cut(s)	1207
Kzo9I	GATC	6 cut(s)	340, 937, 1207, 1815, 1909, 2280
LmnI	GCTCC	7 cut(s)	96, 470, 1359, 1441, 1474, 1993, 2271
LweI	GCATC	2 cut(s)	1957, 2315
MaeI	CTAG	3 cut(s)	323, 1124, 1835
MaeII	ACGT	2 cut(s)	1621, 2066
MalI	GATC	6 cut(s)	342, 939, 1209, 1817, 1911, 2282
MbiI	CCGCTC	1 cut(s)	1444
MboI	GATC	6 cut(s)	340, 937, 1207, 1815, 1909, 2280
MboII	GAAGA	9 cut(s)	52, 146, 296, 301, 478, 614, 1087, 1234, 2405
MflI	RGATCY	2 cut(s)	340, 937
MhlI	GDGCHC	3 cut(s)	475, 919, 2340
MlsI	TGGCCA	1 cut(s)	581
MluCI	AATT	9 cut(s)	138, 252, 420, 785, 849, 882, 1005, 2007, 2255
MluNI	TGGCCA	1 cut(s)	581
MlyI	GAGTC	3 cut(s)	66, 1353, 1615
MmeI	TCCRAC	3 cut(s)	550, 1381, 1713
Mox20I	TGGCCA	1 cut(s)	581
Mph1103I	ATGCAT	1 cut(s)	1659
MroI	TCCGGA	1 cut(s)	2287
MscI	TGGCCA	1 cut(s)	581
MslI	CAYNNNNRTG	2 cut(s)	494, 1560
Msp20I	TGGCCA	1 cut(s)	581
MspA1I	CMGCKG	4 cut(s)	590, 596, 824, 1603
MspCI	CTTAAG	1 cut(s)	548
MspI	CCGG	3 cut(s)	355, 658, 2288
MspR9I	CCNGG	4 cut(s)	65, 668, 1130, 1953
Mva1269I	GAATGC	2 cut(s)	1555, 1801
MvaI	CCWGG	4 cut(s)	65, 668, 1130, 1953
MvnI	CGCG	3 cut(s)	136, 1016, 1991
MwoI	GCNNNNNNNGC	5 cut(s)	88, 587, 818, 1640, 2344
NdeII	GATC	6 cut(s)	340, 937, 1207, 1815, 1909, 2280
NlaIV	GGNNCC	7 cut(s)	472, 916, 1136, 1388, 1741, 2214, 2262
NmuCI	GTSAC	3 cut(s)	227, 832, 2243
NsiI	ATGCAT	1 cut(s)	1659
NspI	RCATGY	1 cut(s)	27
NspV	TTCGAA	1 cut(s)	1936
PagI	TCATGA	1 cut(s)	1140
PaqCI	CACCTGC	1 cut(s)	902
PasI	CCCWGGG	1 cut(s)	1129
PauI	GCGCGC	1 cut(s)	1014
PceI	AGGCCT	2 cut(s)	1489, 2206
PciI	ACATGT	1 cut(s)	23
PcsI	WCGNNNNNNNCGW	1 cut(s)	2063
PctI	GAATGC	2 cut(s)	1555, 1801
PfeI	GAWTC	8 cut(s)	201, 396, 619, 1871, 1933, 2033, 2161, 2396
PflMI	CCANNNNNTGG	1 cut(s)	1732
PleI	GAGTC	3 cut(s)	65, 1353, 1614
PpsI	GAGTC	3 cut(s)	65, 1353, 1614
PscI	ACATGT	1 cut(s)	23
PshAI	GACNNNNGTC	1 cut(s)	1830
PshBI	ATTAAT	1 cut(s)	1404
Psp6I	CCWGG	4 cut(s)	63, 666, 1128, 1951
PspFI	CCCAGC	2 cut(s)	259, 824
PspGI	CCWGG	4 cut(s)	63, 666, 1128, 1951
PspN4I	GGNNCC	7 cut(s)	472, 916, 1136, 1388, 1741, 2214, 2262
PspPI	GGNCC	7 cut(s)	212, 529, 902, 1825, 2051, 2213, 2261
PstI	CTGCAG	1 cut(s)	2146
PsuI	RGATCY	2 cut(s)	340, 937
PteI	GCGCGC	1 cut(s)	1014
PvuII	CAGCTG	3 cut(s)	596, 824, 1603
RsaI	GTAC	8 cut(s)	427, 968, 1107, 1319, 1381, 1741, 1766, 2299
RsaNI	GTAC	8 cut(s)	426, 967, 1106, 1318, 1380, 1740, 1765, 2298
RseI	CAYNNNNRTG	2 cut(s)	494, 1560
Sau3AI	GATC	6 cut(s)	340, 937, 1207, 1815, 1909, 2280
Sau96I	GGNCC	7 cut(s)	212, 529, 902, 1825, 2051, 2213, 2261
SchI	GAGTC	3 cut(s)	66, 1353, 1615
ScrFI	CCNGG	4 cut(s)	65, 668, 1130, 1953
SduI	GDGCHC	3 cut(s)	475, 919, 2340
SfaNI	GCATC	2 cut(s)	1957, 2315
SfcI	CTRYAG	4 cut(s)	288, 1080, 1266, 2142
SfuI	TTCGAA	1 cut(s)	1936
SinI	GGWCC	3 cut(s)	902, 1825, 2213
SmiMI	CAYNNNNRTG	2 cut(s)	494, 1560
SmlI	CTYRAG	5 cut(s)	548, 976, 1790, 2087, 2339
SmoI	CTYRAG	5 cut(s)	548, 976, 1790, 2087, 2339
Sse9I	AATT	9 cut(s)	138, 252, 420, 785, 849, 882, 1005, 2007, 2255
SseBI	AGGCCT	2 cut(s)	1489, 2206
SsiI	CCGC	5 cut(s)	358, 590, 1444, 1494, 1991
SspI	AATATT	1 cut(s)	1500
SspMI	CTAG	3 cut(s)	323, 1124, 1835
StuI	AGGCCT	2 cut(s)	1489, 2206
StyD4I	CCNGG	4 cut(s)	63, 666, 1128, 1951
TaaI	ACNGT	7 cut(s)	19, 277, 906, 1379, 1685, 1829, 1885
TaiI	ACGT	2 cut(s)	1624, 2069
TaqI	TCGA	6 cut(s)	730, 1413, 1609, 1756, 1936, 2200
TasI	AATT	9 cut(s)	138, 252, 420, 785, 849, 882, 1005, 2007, 2255
TatI	WGTACW	3 cut(s)	966, 1317, 1764
TauI	GCSGC	2 cut(s)	593, 1447
TfiI	GAWTC	8 cut(s)	201, 396, 619, 1871, 1933, 2033, 2161, 2396
TscAI	CASTG	5 cut(s)	568, 841, 1690, 2308, 2316
TseFI	GTSAC	3 cut(s)	227, 832, 2243
Tsp45I	GTSAC	3 cut(s)	227, 832, 2243
TspDTI	ATGAA	6 cut(s)	53, 478, 842, 1157, 1243, 2059
TspGWI	ACGGA	1 cut(s)	2072
TspRI	CASTG	5 cut(s)	568, 841, 1690, 2308, 2316
Van91I	CCANNNNNTGG	1 cut(s)	1732
Vha464I	CTTAAG	1 cut(s)	548
VpaK11BI	GGWCC	3 cut(s)	902, 1825, 2213
VspI	ATTAAT	1 cut(s)	1404
XapI	RAATTY	2 cut(s)	138, 849
XceI	RCATGY	1 cut(s)	27
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1156, 1733
XmiI	GTMKAC	2 cut(s)	780, 1531
XspI	CTAG	3 cut(s)	323, 1124, 1835
Zsp2I	ATGCAT	1 cut(s)	1659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.