Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0005582

Physical Location & Seq

Genomic Coordinates Forward (+)

1964709 .. 1967143

Gene Structure 2435 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0027900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGGATAGTGAAACACTTGTTAAGAAAATAGGAATCAGTGAGGAGCTCATCAAGAAAAGTTGCAGCCTTTCATGGGAGGATCAGTTCAGTAATGGGCTGTTTCATGTTGACAAGAGCTCATCGGATGCGGTGTTCATCGTCTTCCCCGGATCATGGACGGTCAAAGAGTGGTTTTCCGGCGACCAAGCTTTTGGAGAAACAAAGATCGATAGTAAAGATTGGTCCAAAAAAGCCTTTCCTTCTATGAGAAGTATTGGTAATGATGATGTTGCAATTGTCAACCAAGCTTTTCTGGAAAGGTTTGAACTTGTATTGAAGGACCCCAAGTTTGGAGAAGAGGTGACATCGGCCGTGAACGGGAATAAGCCAATAATATTTACAGGGCATTCTTCTGGTGGCGCAGTTGCTGTGCTTGCTACAATCTGGTTCTTAGAAGCAGAGAGTTCGAAAGCAAAAAAAACTGGAACAGCCAAATGTGTGACTTTTGGATCTCCGCTTGTCGGTGACTACATTGTTTCTCATGCTCTTAAGAGAGAGAAATGGTCTGAACACTTCATACATTTTGTCATGAGATATGACATTGTTCCTCGGATTTTGCTTGCTCCTCTCTCATCCATTCAGCAAGAATTAGAGCATGTCCTCCATTACTTCACTGCAAATGGTCACCATTATCCACGTGAATCAATTGCCCCGGACTTTTATACAAATGTAATGAGGAATGCCTCTGCTCTCGCAAGCCATGCTGCCTGCAAACTGATGGGGAATACTAATTTGCTGCTCGAGACCTTAACAAACTTCACCAAACTAAGCCCTTATAGACCTTTTGGGACTTACATTTTCTGCACTGGGAATGGGAAGCTGGTTCACTTGGACAACCCTGAAGCTGTGCTGCAACTCCTTTTCTTCTCTTGTCAGTTAAGCCATGAAAACGAAATGGAAGCAACAGCTAGGAGCTGCATAAATGCGCACTTGGACTATGCAACTGAATTAGGAAGGAGCTTGGAAGAGAATGTGGTTTATGTTGATCGATTGGAAGAGCTCCCCCTAGCCTCAGATGGTAGTGCCTTGGATGACCTTGGCCTGAGTACAAGAGGTAGATTGTGCCTTCGTGCAGCGGGAGAGTTAGAGAAACAAAAACAAAAAAACCGAGAGCAGATTGACAGAAAGAAGGCAGAAATGGAAGAGGGAATGAAAGGACTACAAGAGTACAGAACCTTCAATGCGCAGAAAGTGGGATATTACGACGCCTTCAAGAAACAGAATGAAAAGAGAGACTTTGATGCCAATGTGAGGAGGCTGGTACTGGCAGGTATATGGGATGAGATCATCGAAATGTTGAAGAGGTACGATCTTCCTGACGAGTTCGAAGGTGATGAAGGTTGGATAGACCTAGGAACCAATTTCCGGCGCCTTGTTGAGCCCCTTGATATTGCTAACTACTACAGACACGCAAAGAACGAAGACACTGGAGCCTATATGGTTAAGGGAAGGCCAAGGCGCTACAGATACCCACAGAGATGGCTTGAAAAGAATAAAGATTTGAAGAGAGATAGCTGTGGAGAATCTTGCTTTTGGGCAGAGGTGGAGGAGTTGCTCAAACTAGCTAGTAATGGTGGTAAAGTTGATGAGACTAGGGCTAAAGAACTACAGGAAGGACTAGCTCGATGGATTCAGCAGCAGGATGTGGCAGGTGAGGATGTGTTCTTGGGAGACTCCACGTTTCTCAAATTGTGGGACGCACTCGGCCGTCTGAAACTCCAACAGGAATCCATTCGCACATTGATAGACACAGCCAAGTTCGCCAACTTATCAGTTTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005783 GO:0006605 GO:0006623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0006886 GO:0007034 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015672 GO:0015833 GO:0031410 GO:0031982 GO:0033036 GO:0033365 GO:0034613 GO:0042592 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

606

Amino Acids

68.82

Weight (kDa)

5.75

Isoelectric Point (pI)

38.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipase_3	PF01764	71 - 199	9.2e-20	Lipase (class 3)
EDS1_EP	PF18117	400 - 582	3.2e-49	Enhanced disease susceptibility 1 protein EP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005582)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23700 AT4G23700
fragaria_vesca	FvH4_5g03731 FvH4_5g03731
malus_domestica	MD00G1094100.v1.1 MD06G1097000.v1.1
prunus_persica	Prupe.5G111700_v2.0.a1 Prupe.5G111700_v2.0.a1 Prupe.5G111700_v2.0.a1 Prupe.5G111700_v2.0.a1 Prupe.5G111700_v2.0.a1 Prupe.5G111700_v2.0.a1
pyrus_communis	pycom06g09310
rosa_chinensis	RchiOBHm_Chr7g0195971
rosa_laevigata	RLG00000004078
rosa_multiflora	Rmu_co8262837.1_g000001 Rmu_sc0004016.1_g000001 Rmu_ssc0000453.1_g000003
rosa_roxburghii	Rroxscaffold_3G00259980
rosa_rugosa	Rorug07G0027700 Rorug07G0027900 Rorug07G0028000 Rorug07G0028100
rosa_samantha	Rh7AG155200 Rh7BG157100 Rh7CG160600 Rh7DG156100
rosa_wichuraiana	Rw7G013270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1679
Acc16I	TGCGCA	2 cut(s)	966, 1224
Acc36I	ACCTGC	2 cut(s)	1298, 1679
AccB1I	GGYRCC	1 cut(s)	1407
AciI	CCGC	3 cut(s)	128, 494, 1115
AclWI	GGATC	3 cut(s)	87, 157, 496
AcoI	YGGCCR	2 cut(s)	348, 1744
AcuI	CTGAAG	1 cut(s)	900
AcvI	CACGTG	1 cut(s)	677
AcyI	GRCGYC	2 cut(s)	1245, 1408
AfaI	GTAC	4 cut(s)	1087, 1208, 1302, 1346
AfiI	CCNNNNNNNGG	7 cut(s)	73, 153, 329, 357, 500, 1290, 1404
AflII	CTTAAG	1 cut(s)	527
AgsI	TTSAA	7 cut(s)	305, 316, 1219, 1252, 1339, 1526, 1543
AloI	GAACNNNNNNTCC	4 cut(s)	68, 100, 116, 148
Alw21I	GWGCWC	3 cut(s)	48, 119, 1041
Alw26I	GTCTC	4 cut(s)	776, 1266, 1622, 1704
AlwI	GGATC	3 cut(s)	87, 157, 496
AlwNI	CAGNNNCTG	1 cut(s)	407
Ama87I	CYCGRG	1 cut(s)	779
AoxI	GGCC	4 cut(s)	348, 1078, 1490, 1744
ApeKI	GCWGC	7 cut(s)	63, 743, 775, 889, 954, 1112, 1675
ArsI	GACNNNNNNTTYG	4 cut(s)	173, 205, 311, 343
Asp700I	GAANNNNTTC	1 cut(s)	1770
AspA2I	CCTAGG	1 cut(s)	1390
AspLEI	GCGC	5 cut(s)	401, 967, 1225, 1410, 1500
AspS9I	GGNCC	2 cut(s)	222, 319
AsuC2I	CCSGG	2 cut(s)	147, 692
AsuHPI	GGTGA	6 cut(s)	352, 515, 656, 790, 1382, 1703
AsuII	TTCGAA	2 cut(s)	446, 1365
AvaI	CYCGRG	1 cut(s)	779
AvaII	GGWCC	2 cut(s)	222, 319
AvrII	CCTAGG	1 cut(s)	1390
BanI	GGYRCC	1 cut(s)	1407
BanII	GRGCYC	4 cut(s)	48, 119, 1041, 1422
BarI	GAAGNNNNNNTAC	2 cut(s)	1199, 1231
BbrPI	CACGTG	1 cut(s)	677
BbsI	GAAGAC	2 cut(s)	133, 1467
Bbv12I	GWGCWC	3 cut(s)	48, 119, 1041
BbvI	GCAGC	7 cut(s)	75, 730, 762, 876, 941, 1124, 1687
BccI	CCATC	4 cut(s)	751, 1049, 1512, 1659
BceAI	ACGGC	2 cut(s)	335, 1731
BcgI	CGANNNNNNTGC	2 cut(s)	426, 460
BcnI	CCSGG	2 cut(s)	147, 692
BcoDI	GTCTC	4 cut(s)	776, 1266, 1622, 1704
BfaI	CTAG	7 cut(s)	948, 1046, 1391, 1601, 1605, 1632, 1658
BfmI	CTRYAG	3 cut(s)	1441, 1501, 1646
BfoI	RGCGCY	2 cut(s)	1411, 1501
BfrI	CTTAAG	1 cut(s)	527
BfuAI	ACCTGC	2 cut(s)	1298, 1679
BisI	GCNGC	7 cut(s)	64, 744, 776, 890, 955, 1113, 1676
BlnI	CCTAGG	1 cut(s)	1390
BlsI	GCNGC	7 cut(s)	65, 745, 777, 891, 956, 1114, 1677
Bme1390I	CCNGG	2 cut(s)	147, 692
Bme18I	GGWCC	2 cut(s)	222, 319
BmeT110I	CYCGRG	1 cut(s)	779
BmgT120I	GGNCC	2 cut(s)	222, 319
BmiI	GGNNCC	4 cut(s)	321, 1396, 1409, 1471
BmrFI	CCNGG	2 cut(s)	147, 692
BmrI	ACTGGG	1 cut(s)	855
BmsI	GCATC	2 cut(s)	115, 1270
BmuI	ACTGGG	1 cut(s)	855
BpiI	GAAGAC	2 cut(s)	133, 1467
BpmI	CTGGAG	1 cut(s)	1488
Bpu14I	TTCGAA	2 cut(s)	446, 1365
BpuMI	CCSGG	2 cut(s)	147, 692
Bsa29I	ATCGAT	2 cut(s)	207, 1027
BsaAI	YACGTR	1 cut(s)	677
BsaHI	GRCGYC	2 cut(s)	1245, 1408
BsaI	GGTCTC	1 cut(s)	776
BsaJI	CCNNGG	7 cut(s)	145, 587, 690, 1065, 1075, 1390, 1493
BsaXI	ACNNNNNCTCC	4 cut(s)	68, 98, 324, 354
Bsc4I	CCNNNNNNNGG	7 cut(s)	73, 153, 329, 357, 500, 1290, 1404
Bse1I	ACTGG	4 cut(s)	466, 850, 1308, 1471
BseCI	ATCGAT	2 cut(s)	207, 1027
BseDI	CCNNGG	7 cut(s)	145, 587, 690, 1065, 1075, 1390, 1493
BseGI	GGATG	6 cut(s)	130, 611, 1075, 1324, 1687, 1702
BseLI	CCNNNNNNNGG	7 cut(s)	73, 153, 329, 357, 500, 1290, 1404
BseMII	CTCAG	2 cut(s)	1065, 1073
BseNI	ACTGG	4 cut(s)	466, 850, 1308, 1471
BseRI	GAGGAG	4 cut(s)	56, 594, 1306, 1601
BseX3I	CGGCCG	2 cut(s)	348, 1744
BseXI	GCAGC	7 cut(s)	75, 730, 762, 876, 941, 1124, 1687
BsgI	GTGCAG	2 cut(s)	826, 1131
Bsh1285I	CGRYCG	2 cut(s)	351, 1747
BshFI	GGCC	4 cut(s)	350, 1080, 1492, 1746
BshNI	GGYRCC	1 cut(s)	1407
BshVI	ATCGAT	2 cut(s)	207, 1027
BsiEI	CGRYCG	2 cut(s)	351, 1747
BsiHKAI	GWGCWC	3 cut(s)	48, 119, 1041
BsiHKCI	CYCGRG	1 cut(s)	779
BsiSI	CCGG	4 cut(s)	147, 177, 692, 1405
BslFI	GGGAC	2 cut(s)	841, 1748
BslI	CCNNNNNNNGG	7 cut(s)	73, 153, 329, 357, 500, 1290, 1404
BsmAI	GTCTC	4 cut(s)	776, 1266, 1622, 1704
BsmFI	GGGAC	2 cut(s)	841, 1748
BsmI	GAATGC	2 cut(s)	385, 724
BsnI	GGCC	4 cut(s)	350, 1080, 1492, 1746
Bso31I	GGTCTC	1 cut(s)	776
BsoBI	CYCGRG	1 cut(s)	779
Bsp119I	TTCGAA	2 cut(s)	446, 1365
Bsp1286I	GDGCHC	4 cut(s)	48, 119, 1041, 1422
Bsp143I	GATC	7 cut(s)	79, 149, 204, 488, 1024, 1323, 1348
BspACI	CCGC	3 cut(s)	128, 494, 1115
BspANI	GGCC	4 cut(s)	350, 1080, 1492, 1746
BspCNI	CTCAG	2 cut(s)	1064, 1074
BspDI	ATCGAT	2 cut(s)	207, 1027
BspHI	TCATGA	1 cut(s)	567
BspLI	GGNNCC	4 cut(s)	321, 1396, 1409, 1471
BspMI	ACCTGC	2 cut(s)	1298, 1679
BspPI	GGATC	3 cut(s)	87, 157, 496
BspQI	GCTCTTC	1 cut(s)	1029
BspT104I	TTCGAA	2 cut(s)	446, 1365
BspT107I	GGYRCC	1 cut(s)	1407
BspTI	CTTAAG	1 cut(s)	527
BspTNI	GGTCTC	1 cut(s)	776
BsrI	ACTGG	4 cut(s)	466, 850, 1308, 1471
BssECI	CCNNGG	7 cut(s)	145, 587, 690, 1065, 1075, 1390, 1493
BssMI	GATC	7 cut(s)	79, 149, 204, 488, 1024, 1323, 1348
BssNI	GRCGYC	2 cut(s)	1245, 1408
BssT1I	CCWWGG	4 cut(s)	1065, 1075, 1390, 1493
Bst4CI	ACNGT	1 cut(s)	160
Bst6I	CTCTTC	6 cut(s)	330, 999, 1029, 1176, 1334, 1538
BstACI	GRCGYC	2 cut(s)	1245, 1408
BstAFI	CTTAAG	1 cut(s)	527
BstAPI	GCANNNNNTGC	1 cut(s)	740
BstBAI	YACGTR	1 cut(s)	677
BstBI	TTCGAA	2 cut(s)	446, 1365
BstC8I	GCNNGC	4 cut(s)	414, 600, 736, 748
BstDEI	CTNAG	4 cut(s)	430, 806, 1051, 1082
BstEII	GGTNACC	1 cut(s)	662
BstF5I	GGATG	6 cut(s)	130, 611, 1075, 1324, 1687, 1702
BstH2I	RGCGCY	2 cut(s)	1411, 1501
BstHHI	GCGC	5 cut(s)	401, 967, 1225, 1410, 1500
BstKTI	GATC	7 cut(s)	82, 152, 207, 491, 1027, 1326, 1351
BstMAI	GTCTC	4 cut(s)	776, 1266, 1622, 1704
BstMBI	GATC	7 cut(s)	79, 149, 204, 488, 1024, 1323, 1348
BstMCI	CGRYCG	2 cut(s)	351, 1747
BstMWI	GCNNNNNNNGC	3 cut(s)	413, 740, 1799
BstNSI	RCATGY	1 cut(s)	638
BstPI	GGTNACC	1 cut(s)	662
BstSCI	CCNGG	2 cut(s)	145, 690
BstSFI	CTRYAG	3 cut(s)	1441, 1501, 1646
BstV1I	GCAGC	7 cut(s)	75, 730, 762, 876, 941, 1124, 1687
BstV2I	GAAGAC	2 cut(s)	133, 1467
BstX2I	RGATCY	1 cut(s)	488
BstXI	CCANNNNNNTGG	2 cut(s)	191, 1518
BstYI	RGATCY	1 cut(s)	488
BstZI	CGGCCG	2 cut(s)	348, 1744
Bsu15I	ATCGAT	2 cut(s)	207, 1027
BsuRI	GGCC	4 cut(s)	350, 1080, 1492, 1746
BsuTUI	ATCGAT	2 cut(s)	207, 1027
BtsCI	GGATG	6 cut(s)	130, 611, 1075, 1324, 1687, 1702
BtsI	GCAGTG	1 cut(s)	651
BtsIMutI	CAGTG	4 cut(s)	43, 651, 843, 1464
BveI	ACCTGC	2 cut(s)	1298, 1679
Cac8I	GCNNGC	4 cut(s)	414, 600, 736, 748
CaiI	CAGNNNCTG	1 cut(s)	407
CciI	TCATGA	1 cut(s)	567
CfoI	GCGC	5 cut(s)	401, 967, 1225, 1410, 1500
Cfr13I	GGNCC	2 cut(s)	222, 319
ClaI	ATCGAT	2 cut(s)	207, 1027
CseI	GACGC	2 cut(s)	1253, 1745
Csp6I	GTAC	4 cut(s)	1086, 1207, 1301, 1345
CviAII	CATG	8 cut(s)	72, 104, 153, 521, 568, 635, 740, 923
CviQI	GTAC	4 cut(s)	1086, 1207, 1301, 1345
DdeI	CTNAG	4 cut(s)	430, 806, 1051, 1082
DinI	GGCGCC	1 cut(s)	1409
DpnI	GATC	7 cut(s)	81, 151, 206, 490, 1026, 1325, 1350
DpnII	GATC	7 cut(s)	79, 149, 204, 488, 1024, 1323, 1348
EaeI	YGGCCR	2 cut(s)	348, 1744
EagI	CGGCCG	2 cut(s)	348, 1744
Eam1104I	CTCTTC	6 cut(s)	330, 999, 1029, 1176, 1334, 1538
EarI	CTCTTC	6 cut(s)	330, 999, 1029, 1176, 1334, 1538
Ecl136II	GAGCTC	3 cut(s)	46, 117, 1039
EclXI	CGGCCG	2 cut(s)	348, 1744
Eco130I	CCWWGG	4 cut(s)	1065, 1075, 1390, 1493
Eco24I	GRGCYC	4 cut(s)	48, 119, 1041, 1422
Eco31I	GGTCTC	1 cut(s)	776
Eco47I	GGWCC	2 cut(s)	222, 319
Eco52I	CGGCCG	2 cut(s)	348, 1744
Eco53kI	GAGCTC	3 cut(s)	46, 117, 1039
Eco57I	CTGAAG	1 cut(s)	900
Eco72I	CACGTG	1 cut(s)	677
Eco88I	CYCGRG	1 cut(s)	779
Eco91I	GGTNACC	1 cut(s)	662
EcoICRI	GAGCTC	3 cut(s)	46, 117, 1039
EcoO109I	RGGNCCY	1 cut(s)	319
EcoO65I	GGTNACC	1 cut(s)	662
EcoT14I	CCWWGG	4 cut(s)	1065, 1075, 1390, 1493
EcoT38I	GRGCYC	4 cut(s)	48, 119, 1041, 1422
EgeI	GGCGCC	1 cut(s)	1409
EheI	GGCGCC	1 cut(s)	1409
ErhI	CCWWGG	4 cut(s)	1065, 1075, 1390, 1493
FaeI	CATG	8 cut(s)	75, 107, 156, 524, 571, 638, 743, 926
FalI	AAGNNNNNCTT	2 cut(s)	1259, 1291
FaqI	GGGAC	2 cut(s)	841, 1748
FatI	CATG	8 cut(s)	71, 103, 152, 520, 567, 634, 739, 922
FauI	CCCGC	1 cut(s)	1108
Fnu4HI	GCNGC	7 cut(s)	64, 744, 776, 890, 955, 1113, 1676
FokI	GGATG	6 cut(s)	137, 598, 1082, 1331, 1694, 1709
FriOI	GRGCYC	4 cut(s)	48, 119, 1041, 1422
Fsp4HI	GCNGC	7 cut(s)	64, 744, 776, 890, 955, 1113, 1676
FspAI	RTGCGCAY	1 cut(s)	966
FspBI	CTAG	7 cut(s)	948, 1046, 1391, 1601, 1605, 1632, 1658
FspI	TGCGCA	2 cut(s)	966, 1224
GlaI	GCGC	5 cut(s)	400, 966, 1224, 1409, 1499
GluI	GCNGC	7 cut(s)	64, 744, 776, 890, 955, 1113, 1676
GsuI	CTGGAG	1 cut(s)	1488
HaeII	RGCGCY	2 cut(s)	1411, 1501
HaeIII	GGCC	4 cut(s)	350, 1080, 1492, 1746
HapII	CCGG	4 cut(s)	147, 177, 692, 1405
HgaI	GACGC	2 cut(s)	1253, 1745
HhaI	GCGC	5 cut(s)	401, 967, 1225, 1410, 1500
Hin1I	GRCGYC	2 cut(s)	1245, 1408
Hin1II	CATG	8 cut(s)	75, 107, 156, 524, 571, 638, 743, 926
Hin6I	GCGC	5 cut(s)	399, 965, 1223, 1408, 1498
HinP1I	GCGC	5 cut(s)	399, 965, 1223, 1408, 1498
HincII	GTYRAC	2 cut(s)	109, 280
HindII	GTYRAC	2 cut(s)	109, 280
HindIII	AAGCTT	2 cut(s)	186, 285
HinfI	GANTC	6 cut(s)	33, 680, 1562, 1669, 1712, 1766
HpaII	CCGG	4 cut(s)	147, 177, 692, 1405
HphI	GGTGA	6 cut(s)	352, 515, 656, 790, 1382, 1703
Hpy166II	GTNNAC	4 cut(s)	109, 280, 355, 865
Hpy188I	TCNGA	5 cut(s)	124, 547, 591, 1054, 1752
Hpy188III	TCNNGA	6 cut(s)	52, 293, 568, 781, 1252, 1355
Hpy8I	GTNNAC	4 cut(s)	109, 280, 355, 865
Hpy99I	CGWCG	1 cut(s)	1247
HpyCH4III	ACNGT	1 cut(s)	160
HpyCH4IV	ACGT	2 cut(s)	676, 1718
HpyCH4V	TGCA	9 cut(s)	63, 272, 656, 750, 843, 892, 957, 980, 1112
HpyF10VI	GCNNNNNNNGC	3 cut(s)	413, 740, 1799
HpyF3I	CTNAG	4 cut(s)	430, 806, 1051, 1082
HpySE526I	ACGT	2 cut(s)	676, 1718
Hsp92I	GRCGYC	2 cut(s)	1245, 1408
Hsp92II	CATG	8 cut(s)	75, 107, 156, 524, 571, 638, 743, 926
HspAI	GCGC	5 cut(s)	399, 965, 1223, 1408, 1498
KasI	GGCGCC	1 cut(s)	1407
Kzo9I	GATC	7 cut(s)	79, 149, 204, 488, 1024, 1323, 1348
LguI	GCTCTTC	1 cut(s)	1029
LmnI	GCTCC	6 cut(s)	43, 607, 951, 996, 1044, 1469
Lsp1109I	GCAGC	7 cut(s)	75, 730, 762, 876, 941, 1124, 1687
LweI	GCATC	2 cut(s)	115, 1270
MaeI	CTAG	7 cut(s)	948, 1046, 1391, 1601, 1605, 1632, 1658
MaeII	ACGT	2 cut(s)	676, 1718
MaeIII	GTNAC	4 cut(s)	340, 478, 503, 662
MalI	GATC	7 cut(s)	81, 151, 206, 490, 1026, 1325, 1350
MboI	GATC	7 cut(s)	79, 149, 204, 488, 1024, 1323, 1348
MfeI	CAATTG	2 cut(s)	273, 684
MflI	RGATCY	1 cut(s)	488
MhlI	GDGCHC	4 cut(s)	48, 119, 1041, 1422
MluCI	AATT	7 cut(s)	273, 626, 684, 769, 986, 1399, 1727
Mly113I	GGCGCC	1 cut(s)	1408
MlyI	GAGTC	1 cut(s)	1706
MmeI	TCCRAC	2 cut(s)	1361, 1783
MroXI	GAANNNNTTC	1 cut(s)	1770
MseI	TTAA	5 cut(s)	21, 528, 788, 917, 1482
MslI	CAYNNNNRTG	2 cut(s)	1331, 1516
MspA1I	CMGCKG	1 cut(s)	1115
MspCI	CTTAAG	1 cut(s)	527
MspI	CCGG	4 cut(s)	147, 177, 692, 1405
MspR9I	CCNGG	2 cut(s)	147, 692
MunI	CAATTG	2 cut(s)	273, 684
Mva1269I	GAATGC	2 cut(s)	385, 724
MwoI	GCNNNNNNNGC	3 cut(s)	413, 740, 1799
NarI	GGCGCC	1 cut(s)	1408
NciI	CCSGG	2 cut(s)	147, 692
NdeII	GATC	7 cut(s)	79, 149, 204, 488, 1024, 1323, 1348
NlaIII	CATG	8 cut(s)	75, 107, 156, 524, 571, 638, 743, 926
NlaIV	GGNNCC	4 cut(s)	321, 1396, 1409, 1471
NmeAIII	GCCGAG	1 cut(s)	1722
NmuCI	GTSAC	4 cut(s)	340, 478, 503, 662
NsbI	TGCGCA	2 cut(s)	966, 1224
NspI	RCATGY	1 cut(s)	638
NspV	TTCGAA	2 cut(s)	446, 1365
PaeR7I	CTCGAG	1 cut(s)	779
PagI	TCATGA	1 cut(s)	567
PaqCI	CACCTGC	1 cut(s)	1679
PciSI	GCTCTTC	1 cut(s)	1029
PcsI	WCGNNNNNNNCGW	1 cut(s)	1455
PctI	GAATGC	2 cut(s)	385, 724
PdmI	GAANNNNTTC	1 cut(s)	1770
PfeI	GAWTC	5 cut(s)	33, 680, 1562, 1669, 1766
PkrI	GCNGC	7 cut(s)	65, 745, 777, 891, 956, 1114, 1677
PleI	GAGTC	1 cut(s)	1706
PluTI	GGCGCC	1 cut(s)	1411
PmaCI	CACGTG	1 cut(s)	677
PmlI	CACGTG	1 cut(s)	677
PpsI	GAGTC	1 cut(s)	1706
Ppu21I	YACGTR	1 cut(s)	677
PpuMI	RGGWCCY	1 cut(s)	319
Psp124BI	GAGCTC	3 cut(s)	48, 119, 1041
Psp5II	RGGWCCY	1 cut(s)	319
PspCI	CACGTG	1 cut(s)	677
PspEI	GGTNACC	1 cut(s)	662
PspN4I	GGNNCC	4 cut(s)	321, 1396, 1409, 1471
PspPI	GGNCC	2 cut(s)	222, 319
PspPPI	RGGWCCY	1 cut(s)	319
PsrI	GAACNNNNNNTAC	2 cut(s)	540, 572
PstNI	CAGNNNCTG	1 cut(s)	407
PsuI	RGATCY	1 cut(s)	488
RsaI	GTAC	4 cut(s)	1087, 1208, 1302, 1346
RsaNI	GTAC	4 cut(s)	1086, 1207, 1301, 1345
RseI	CAYNNNNRTG	2 cut(s)	1331, 1516
SacI	GAGCTC	3 cut(s)	48, 119, 1041
SapI	GCTCTTC	1 cut(s)	1029
SaqAI	TTAA	5 cut(s)	21, 528, 788, 917, 1482
SatI	GCNGC	7 cut(s)	64, 744, 776, 890, 955, 1113, 1676
Sau3AI	GATC	7 cut(s)	79, 149, 204, 488, 1024, 1323, 1348
Sau96I	GGNCC	2 cut(s)	222, 319
SchI	GAGTC	1 cut(s)	1706
ScrFI	CCNGG	2 cut(s)	147, 692
SduI	GDGCHC	4 cut(s)	48, 119, 1041, 1422
SfaNI	GCATC	2 cut(s)	115, 1270
SfcI	CTRYAG	3 cut(s)	1441, 1501, 1646
SfoI	GGCGCC	1 cut(s)	1409
Sfr274I	CTCGAG	1 cut(s)	779
SfuI	TTCGAA	2 cut(s)	446, 1365
SinI	GGWCC	2 cut(s)	222, 319
SlaI	CTCGAG	1 cut(s)	779
SmiMI	CAYNNNNRTG	2 cut(s)	1331, 1516
SmlI	CTYRAG	2 cut(s)	527, 779
SmoI	CTYRAG	2 cut(s)	527, 779
Sse9I	AATT	7 cut(s)	273, 626, 684, 769, 986, 1399, 1727
SsiI	CCGC	3 cut(s)	128, 494, 1115
SspDI	GGCGCC	1 cut(s)	1407
SspI	AATATT	1 cut(s)	375
SspMI	CTAG	7 cut(s)	948, 1046, 1391, 1601, 1605, 1632, 1658
SstI	GAGCTC	3 cut(s)	48, 119, 1041
StyD4I	CCNGG	2 cut(s)	145, 690
StyI	CCWWGG	4 cut(s)	1065, 1075, 1390, 1493
TaaI	ACNGT	1 cut(s)	160
TaiI	ACGT	2 cut(s)	679, 1721
TaqI	TCGA	7 cut(s)	207, 446, 780, 1027, 1329, 1365, 1663
TasI	AATT	7 cut(s)	273, 626, 684, 769, 986, 1399, 1727
TatI	WGTACW	2 cut(s)	1085, 1206
TfiI	GAWTC	5 cut(s)	33, 680, 1562, 1669, 1766
Tru1I	TTAA	5 cut(s)	21, 528, 788, 917, 1482
Tru9I	TTAA	5 cut(s)	21, 528, 788, 917, 1482
TscAI	CASTG	4 cut(s)	43, 658, 850, 1471
TseFI	GTSAC	4 cut(s)	340, 478, 503, 662
TseI	GCWGC	7 cut(s)	63, 743, 775, 889, 954, 1112, 1675
Tsp45I	GTSAC	4 cut(s)	340, 478, 503, 662
TspDTI	ATGAA	8 cut(s)	60, 92, 124, 544, 939, 1205, 1278, 1389
TspRI	CASTG	4 cut(s)	43, 658, 850, 1471
Vha464I	CTTAAG	1 cut(s)	527
VpaK11BI	GGWCC	2 cut(s)	222, 319
XceI	RCATGY	1 cut(s)	638
XhoI	CTCGAG	1 cut(s)	779
XmaJI	CCTAGG	1 cut(s)	1390
XmnI	GAANNNNTTC	1 cut(s)	1770
XspI	CTAG	7 cut(s)	948, 1046, 1391, 1601, 1605, 1632, 1658

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.