Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0005455

Physical Location & Seq

Genomic Coordinates Forward (+)

4151126 .. 4156844

Gene Structure 5719 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g07030.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGTCTGGACAGGAGCCCCAACTAGCTAACCACCCCAAGGCCACCGCCTTTGCCGCCAATCTCAACGTCGACCCACCGGATACCGACGCCGCTGTCCCCTCCACGTGTCATCCCCCGAGGGACTCCGACACCGCCGAAGGCGAAGCTAGAAGATTGACCAAATTGGGAAAAAGCCGGTCCAGAAATTTCAAGGTGGACTGCCCTCCTCCTATGGACTGTGGACCTGACCCAGACGGTCAACAACCCTTCTCTGCTTCTTCTTCTTCTCGTGAAGAAAAAGTCAGCAGCCTCAAAACTGGCTTGGTTCACGTTGCGAGGAAGATGCCGAAAAACGCGCATGCCCATTTCATACTGGGACTCATGTATCAGAGGCTGGGTCAGCCTTCCAAGGCAGTTTTGTCATATGATAAGGCGGAAGAGATTCTGCGGCGGCCCGAGGTTGACATTGATAGGACTGAGTTGCTTTCAGTGGTTCAGATTCATCATGCTCAGTGTATTATGCTGGAAAGTTCGGTGGATGATAGTTCGGATAAAGAACTTGAACCTCGGGAGCTTGAGGAGCTTCTTTCGAAACTAAAAGAATCGATGCAGTCTGATGTACGACAGGCAGCTGTGTGGAACACTCTCGGTTTGATACTGCTGAAAACTGGCCGTCTGCAGAGTGCCATTTCGATATTGTCGTCTTTGTTAGAAGTTTCCCCTACCAACTATGATTGCCTTGCAAACCTTGGGATTGCTTACCTTCAAAGTGGAAATTTGGAACTGTCAGAAAAATGTTTCCAGGAGTTGATCCTCAAAGATCAAAATCATCCCACCGCCTTGATCAATTATGCTGCGCTTCTTTTATGTAGATATGGTTCAGTAGTTGCAGGTGCTGGGGCAAGTGCTGGTGGAGGTGCTTCTGCAGATCACGTTTCTGCTATCAATGTTGCAAAGGAGTGTTTGTTAGCATCCTTGAATGAAGATCCTAAAGCAGGACATATATGGGCTAATCTTGCAAATGCCTATTACATGACTGGTGATCATAGGAGTTCCAGCAAGTGCTTGGAGAAGGCAGCAAAATTGGAGCTCAATTGTATGTCTACACGGTACGCTGTTGCAATACACCGAACCAAGGATGCAGAACGGTATCAAGATCCCAACGAACAACTTTCCTGGGCAGGAAATGAAATGGCTTCAGTTATAAGAGATGGAGACTCTGTTTCCGTTGAACTTCCCATAGCATGGGCAGGGCTTGCAATGGTCCACAAAGCCCAACATGAGATTTCAGCAGCATTTGACTCTGAACAGGATTCACTGACAGAGGTGGAAGAACATGCTGATTACAGCTTAAAACAGGCAATAGCTGAGGATCCAGATGATGCTGTGCAATGGCACCAGCTTGGTCTTCATAGCCTTTGTGCGCGACAATATAAAAACTCTCAAAAGTACCTCAAAGCTGCTGTTGCCCGTTTTAAAGAATGCAGTTATGCATGGTCAAATCTAGGTATCTCACTGCAACTATCAGAGCAGCCATCACAAGCGGAAGAAGTATACACAAGGGCCTTGTCATTGGCGACAACTGATCTTGCCCATGCTATATTATCCAACCTTGGGAATCTGTACCGCCAGCAGAAGCATTATGAACGTGCCAAGGCAATGTTTACAAAATCTCTTGAACTCCAGCCTGGCTATGCTCCGGCATTTAATAATTTGGGTCTTGTATTTGTTGCTGAGGGGCAATGGGAAGAAGCAAAGTTCTGTTTCGACAAGGCCCTCCAGGCAGACCCAATGCTAGATGCTGCCAAATCCAACTTGATTAAAGTTGTGTCTACATCACGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000291 GO:0000785 GO:0000956 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034655 GO:0035327 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043928 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0055087 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_16 TPR_19 TPR_2 TPR_7 TPR_8

Protein Analysis

608

Amino Acids

66.56

Weight (kDa)

5.61

Isoelectric Point (pI)

47.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_19	PF14559	213 - 271	9e-09	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005455)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63200 AT5G63200
fragaria_vesca	FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030
malus_domestica	MD06G1160400.v1.1
prunus_persica	Prupe.5G160000_v2.0.a1
pyrus_communis	pycom06g14350
rosa_chinensis	RchiOBHm_Chr5g0027621 RchiOBHm_Chr5g0027631 RchiOBHm_Chr7g0191501
rosa_laevigata	RLG00000004443
rosa_multiflora	Rmu_co8226669.1_g000001 Rmu_sc0002661.1_g000013 Rmu_sc0010599.1_g000002
rosa_roxburghii	Rroxscaffold_157G00438440 Rroxscaffold_3G00263740
rosa_rugosa	Rorug05G0100300 Rorug06G0510500
rosa_samantha	Rh5CG212600 Rh5DG194500 Rh7AG118900 Rh7BG121000 Rh7CG123700 Rh7DG121800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1184
AarI	CACCTGC	1 cut(s)	860
AasI	GACNNNNNNGTC	1 cut(s)	92
Acc36I	ACCTGC	1 cut(s)	860
AccB1I	GGYRCC	1 cut(s)	1374
AccB7I	CCANNNNNTGG	1 cut(s)	1224
AccI	GTMKAC	4 cut(s)	69, 1082, 1533, 1811
AccII	CGCG	2 cut(s)	335, 1405
AclWI	GGATC	5 cut(s)	784, 959, 1130, 1346, 1359
AcoI	YGGCCR	1 cut(s)	649
AcsI	RAATTY	2 cut(s)	184, 754
AcuI	CTGAAG	1 cut(s)	1161
AcvI	CACGTG	1 cut(s)	105
AcyI	GRCGYC	1 cut(s)	87
AfaI	GTAC	4 cut(s)	600, 1091, 1430, 1604
AfiI	CCNNNNNNNGG	5 cut(s)	37, 974, 1114, 1224, 1593
AflIII	ACRYGT	1 cut(s)	104
AgsI	TTSAA	6 cut(s)	190, 542, 746, 958, 1211, 1658
AjnI	CCWGG	4 cut(s)	780, 1154, 1666, 1758
Alw21I	GWGCWC	1 cut(s)	1071
Alw26I	GTCTC	1 cut(s)	1188
AlwI	GGATC	5 cut(s)	784, 959, 1130, 1346, 1359
AlwNI	CAGNNNCTG	2 cut(s)	373, 875
Ama87I	CYCGRG	3 cut(s)	115, 434, 546
AoxI	GGCC	5 cut(s)	39, 431, 649, 1542, 1752
ApeKI	GCWGC	8 cut(s)	285, 608, 833, 1055, 1271, 1439, 1510, 1781
ApoI	RAATTY	2 cut(s)	184, 754
Asp700I	GAANNNNTTC	1 cut(s)	420
AspLEI	GCGC	3 cut(s)	337, 838, 1405
AspS9I	GGNCC	6 cut(s)	177, 221, 432, 1243, 1542, 1753
AsuHPI	GGTGA	1 cut(s)	1031
AsuII	TTCGAA	1 cut(s)	569
AvaI	CYCGRG	3 cut(s)	115, 434, 546
AvaII	GGWCC	3 cut(s)	177, 221, 1243
BaeI	ACNNNNGTAYC	2 cut(s)	347, 380
BamHI	GGATCC	1 cut(s)	1351
BanI	GGYRCC	1 cut(s)	1374
BanII	GRGCYC	2 cut(s)	18, 1071
BauI	CACGAG	1 cut(s)	267
BbrPI	CACGTG	1 cut(s)	105
BbsI	GAAGAC	1 cut(s)	1379
Bbv12I	GWGCWC	1 cut(s)	1071
BbvCI	CCTCAGC	2 cut(s)	1347, 1713
BbvI	GCAGC	8 cut(s)	297, 620, 820, 1067, 1283, 1426, 1522, 1768
BccI	CCATC	2 cut(s)	1184, 1522
BceAI	ACGGC	1 cut(s)	636
BcgI	CGANNNNNNTGC	2 cut(s)	304, 338
BciT130I	CCWGG	4 cut(s)	782, 1156, 1668, 1760
BciVI	GTATCC	1 cut(s)	73
BclI	TGATCA	2 cut(s)	822, 1021
BcoDI	GTCTC	1 cut(s)	1188
BfaI	CTAG	4 cut(s)	23, 147, 1484, 1775
BfmI	CTRYAG	2 cut(s)	656, 903
BfuAI	ACCTGC	1 cut(s)	860
BfuI	GTATCC	1 cut(s)	73
BglI	GCCNNNNNGGC	1 cut(s)	1760
Bme1390I	CCNGG	4 cut(s)	782, 1156, 1668, 1760
Bme18I	GGWCC	3 cut(s)	177, 221, 1243
BmeT110I	CYCGRG	3 cut(s)	115, 434, 546
BmgT120I	GGNCC	6 cut(s)	177, 221, 432, 1243, 1542, 1753
BmiI	GGNNCC	3 cut(s)	15, 1353, 1376
BmrFI	CCNGG	4 cut(s)	782, 1156, 1668, 1760
BmrI	ACTGGG	1 cut(s)	362
BmsI	GCATC	6 cut(s)	312, 576, 959, 1108, 1351, 1768
BmuI	ACTGGG	1 cut(s)	362
BpiI	GAAGAC	1 cut(s)	1379
BpmI	CTGGAG	2 cut(s)	1646, 1742
Bpu10I	CCTNAGC	2 cut(s)	1347, 1713
Bpu14I	TTCGAA	1 cut(s)	569
BpuEI	CTTGAG	1 cut(s)	575
Bsa29I	ATCGAT	1 cut(s)	584
BsaAI	YACGTR	1 cut(s)	105
BsaBI	GATNNNNATC	1 cut(s)	804
BsaHI	GRCGYC	1 cut(s)	87
BsaWI	WCCGGW	1 cut(s)	76
BsaXI	ACNNNNNCTCC	4 cut(s)	929, 959, 1185, 1215
Bsc4I	CCNNNNNNNGG	5 cut(s)	37, 974, 1114, 1224, 1593
Bse118I	RCCGGY	1 cut(s)	174
Bse1I	ACTGG	4 cut(s)	301, 357, 652, 1021
Bse3DI	GCAATG	4 cut(s)	1245, 1376, 1644, 1727
Bse8I	GATNNNNATC	1 cut(s)	804
BseBI	CCWGG	4 cut(s)	782, 1156, 1668, 1760
BseCI	ATCGAT	1 cut(s)	584
BseGI	GGATG	5 cut(s)	109, 523, 808, 950, 1123
BseJI	GATNNNNATC	1 cut(s)	804
BseLI	CCNNNNNNNGG	5 cut(s)	37, 974, 1114, 1224, 1593
BseMI	GCAATG	4 cut(s)	1245, 1376, 1644, 1727
BseMII	CTCAG	4 cut(s)	447, 503, 1338, 1704
BseNI	ACTGG	4 cut(s)	301, 357, 652, 1021
BseRI	GAGGAG	2 cut(s)	195, 572
BseXI	GCAGC	8 cut(s)	297, 620, 820, 1067, 1283, 1426, 1522, 1768
BseYI	CCCAGC	2 cut(s)	373, 875
Bsh1236I	CGCG	2 cut(s)	335, 1405
BshFI	GGCC	5 cut(s)	41, 433, 651, 1544, 1754
BshNI	GGYRCC	1 cut(s)	1374
BshVI	ATCGAT	1 cut(s)	584
BsiHKAI	GWGCWC	1 cut(s)	1071
BsiHKCI	CYCGRG	3 cut(s)	115, 434, 546
BsiSI	CCGG	3 cut(s)	77, 175, 1679
BslFI	GGGAC	3 cut(s)	80, 134, 369
BslI	CCNNNNNNNGG	5 cut(s)	37, 974, 1114, 1224, 1593
BsmAI	GTCTC	1 cut(s)	1188
BsmFI	GGGAC	3 cut(s)	80, 134, 369
BsmI	GAATGC	1 cut(s)	1466
BsnI	GGCC	5 cut(s)	41, 433, 651, 1544, 1754
BsoBI	CYCGRG	3 cut(s)	115, 434, 546
Bsp119I	TTCGAA	1 cut(s)	569
Bsp1286I	GDGCHC	2 cut(s)	18, 1071
Bsp143I	GATC	9 cut(s)	789, 799, 822, 907, 964, 1021, 1135, 1351, 1564
BspANI	GGCC	5 cut(s)	41, 433, 651, 1544, 1754
BspCNI	CTCAG	4 cut(s)	448, 502, 1339, 1705
BspDI	ATCGAT	1 cut(s)	584
BspFNI	CGCG	2 cut(s)	335, 1405
BspLI	GGNNCC	3 cut(s)	15, 1353, 1376
BspMAI	CTGCAG	2 cut(s)	660, 907
BspMI	ACCTGC	1 cut(s)	860
BspPI	GGATC	5 cut(s)	784, 959, 1130, 1346, 1359
BspT104I	TTCGAA	1 cut(s)	569
BspT107I	GGYRCC	1 cut(s)	1374
BsrDI	GCAATG	4 cut(s)	1245, 1376, 1644, 1727
BsrFI	RCCGGY	1 cut(s)	174
BsrI	ACTGG	4 cut(s)	301, 357, 652, 1021
BssAI	RCCGGY	1 cut(s)	174
BssMI	GATC	9 cut(s)	789, 799, 822, 907, 964, 1021, 1135, 1351, 1564
BssNAI	GTATAC	1 cut(s)	1534
BssNI	GRCGYC	1 cut(s)	87
BssSI	CACGAG	1 cut(s)	267
BssT1I	CCWWGG	6 cut(s)	36, 387, 727, 1113, 1591, 1632
Bst1107I	GTATAC	1 cut(s)	1534
Bst2BI	CACGAG	1 cut(s)	267
Bst2UI	CCWGG	4 cut(s)	782, 1156, 1668, 1760
Bst4CI	ACNGT	5 cut(s)	218, 236, 765, 1089, 1128
Bst6I	CTCTTC	1 cut(s)	411
BstACI	GRCGYC	1 cut(s)	87
BstAPI	GCANNNNNTGC	1 cut(s)	1235
BstBAI	YACGTR	1 cut(s)	105
BstBI	TTCGAA	1 cut(s)	569
BstC8I	GCNNGC	3 cut(s)	339, 1236, 1610
BstDEI	CTNAG	4 cut(s)	456, 489, 1347, 1713
BstENI	CCTNNNNNAGG	1 cut(s)	972
BstF5I	GGATG	5 cut(s)	109, 523, 808, 950, 1123
BstFNI	CGCG	2 cut(s)	335, 1405
BstHHI	GCGC	3 cut(s)	337, 838, 1405
BstKTI	GATC	9 cut(s)	792, 802, 825, 910, 967, 1024, 1138, 1354, 1567
BstMAI	GTCTC	1 cut(s)	1188
BstMBI	GATC	9 cut(s)	789, 799, 822, 907, 964, 1021, 1135, 1351, 1564
BstMWI	GCNNNNNNNGC	7 cut(s)	53, 379, 559, 995, 1235, 1445, 1760
BstNI	CCWGG	4 cut(s)	782, 1156, 1668, 1760
BstNSI	RCATGY	2 cut(s)	341, 1319
BstSCI	CCNGG	4 cut(s)	780, 1154, 1666, 1758
BstSFI	CTRYAG	2 cut(s)	656, 903
BstUI	CGCG	2 cut(s)	335, 1405
BstV1I	GCAGC	8 cut(s)	297, 620, 820, 1067, 1283, 1426, 1522, 1768
BstV2I	GAAGAC	1 cut(s)	1379
BstX2I	RGATCY	3 cut(s)	964, 1135, 1351
BstYI	RGATCY	3 cut(s)	964, 1135, 1351
BstZ17I	GTATAC	1 cut(s)	1534
Bsu15I	ATCGAT	1 cut(s)	584
BsuI	GTATCC	1 cut(s)	73
BsuRI	GGCC	5 cut(s)	41, 433, 651, 1544, 1754
BsuTUI	ATCGAT	1 cut(s)	584
BtsCI	GGATG	5 cut(s)	109, 523, 808, 950, 1123
BtsI	GCAGTG	1 cut(s)	1493
BtsIMutI	CAGTG	4 cut(s)	474, 497, 1295, 1493
BveI	ACCTGC	1 cut(s)	860
Cac8I	GCNNGC	3 cut(s)	339, 1236, 1610
CaiI	CAGNNNCTG	2 cut(s)	373, 875
CfoI	GCGC	3 cut(s)	337, 838, 1405
Cfr10I	RCCGGY	1 cut(s)	174
Cfr13I	GGNCC	6 cut(s)	177, 221, 432, 1243, 1542, 1753
ClaI	ATCGAT	1 cut(s)	584
CseI	GACGC	1 cut(s)	95
Csp6I	GTAC	4 cut(s)	599, 1090, 1429, 1603
CspCI	CAANNNNNGTGG	2 cut(s)	31, 66
CviAII	CATG	9 cut(s)	338, 361, 485, 1012, 1224, 1259, 1316, 1473, 1574
CviQI	GTAC	4 cut(s)	599, 1090, 1429, 1603
DdeI	CTNAG	4 cut(s)	456, 489, 1347, 1713
DpnI	GATC	9 cut(s)	791, 801, 824, 909, 966, 1023, 1137, 1353, 1566
DpnII	GATC	9 cut(s)	789, 799, 822, 907, 964, 1021, 1135, 1351, 1564
DraI	TTTAAA	1 cut(s)	1456
DrdI	GACNNNNNNGTC	1 cut(s)	92
DseDI	GACNNNNNNGTC	1 cut(s)	92
EaeI	YGGCCR	1 cut(s)	649
Eam1104I	CTCTTC	1 cut(s)	411
EarI	CTCTTC	1 cut(s)	411
EciI	GGCGGA	1 cut(s)	428
Ecl136II	GAGCTC	1 cut(s)	1069
Eco130I	CCWWGG	6 cut(s)	36, 387, 727, 1113, 1591, 1632
Eco24I	GRGCYC	2 cut(s)	18, 1071
Eco47I	GGWCC	3 cut(s)	177, 221, 1243
Eco53kI	GAGCTC	1 cut(s)	1069
Eco57I	CTGAAG	1 cut(s)	1161
Eco72I	CACGTG	1 cut(s)	105
Eco88I	CYCGRG	3 cut(s)	115, 434, 546
EcoICRI	GAGCTC	1 cut(s)	1069
EcoNI	CCTNNNNNAGG	1 cut(s)	972
EcoO109I	RGGNCCY	2 cut(s)	1542, 1753
EcoRII	CCWGG	4 cut(s)	780, 1154, 1666, 1758
EcoT14I	CCWWGG	6 cut(s)	36, 387, 727, 1113, 1591, 1632
EcoT22I	ATGCAT	1 cut(s)	1474
EcoT38I	GRGCYC	2 cut(s)	18, 1071
ErhI	CCWWGG	6 cut(s)	36, 387, 727, 1113, 1591, 1632
FaeI	CATG	9 cut(s)	341, 364, 488, 1015, 1227, 1262, 1319, 1476, 1577
FaqI	GGGAC	3 cut(s)	80, 134, 369
FatI	CATG	9 cut(s)	337, 360, 484, 1011, 1223, 1258, 1315, 1472, 1573
FauNDI	CATATG	1 cut(s)	403
FbaI	TGATCA	2 cut(s)	822, 1021
FblI	GTMKAC	4 cut(s)	69, 1082, 1533, 1811
FokI	GGATG	5 cut(s)	96, 530, 795, 937, 1130
FriOI	GRGCYC	2 cut(s)	18, 1071
FspBI	CTAG	4 cut(s)	23, 147, 1484, 1775
GlaI	GCGC	3 cut(s)	336, 837, 1404
GsaI	CCCAGC	2 cut(s)	377, 879
GsuI	CTGGAG	2 cut(s)	1646, 1742
HaeIII	GGCC	5 cut(s)	41, 433, 651, 1544, 1754
HapII	CCGG	3 cut(s)	77, 175, 1679
HgaI	GACGC	1 cut(s)	95
HhaI	GCGC	3 cut(s)	337, 838, 1405
Hin1I	GRCGYC	1 cut(s)	87
Hin1II	CATG	9 cut(s)	341, 364, 488, 1015, 1227, 1262, 1319, 1476, 1577
Hin6I	GCGC	3 cut(s)	335, 836, 1403
HinP1I	GCGC	3 cut(s)	335, 836, 1403
HincII	GTYRAC	3 cut(s)	70, 239, 442
HindII	GTYRAC	3 cut(s)	70, 239, 442
HinfI	GANTC	9 cut(s)	122, 357, 421, 478, 581, 1196, 1280, 1292, 1597
HpaII	CCGG	3 cut(s)	77, 175, 1679
HphI	GGTGA	1 cut(s)	1031
Hpy188I	TCNGA	8 cut(s)	127, 369, 477, 529, 595, 769, 1285, 1507
Hpy188III	TCNNGA	8 cut(s)	6, 180, 269, 548, 1133, 1355, 1655, 1818
Hpy99I	CGWCG	2 cut(s)	71, 89
HpyAV	CCTTC	5 cut(s)	131, 256, 393, 752, 1045
HpyCH4III	ACNGT	5 cut(s)	218, 236, 765, 1089, 1128
HpyCH4IV	ACGT	5 cut(s)	66, 104, 309, 912, 1627
HpyF10VI	GCNNNNNNNGC	7 cut(s)	53, 379, 559, 995, 1235, 1445, 1760
HpyF3I	CTNAG	4 cut(s)	456, 489, 1347, 1713
HpySE526I	ACGT	5 cut(s)	66, 104, 309, 912, 1627
Hsp92I	GRCGYC	1 cut(s)	87
Hsp92II	CATG	9 cut(s)	341, 364, 488, 1015, 1227, 1262, 1319, 1476, 1577
HspAI	GCGC	3 cut(s)	335, 836, 1403
Ksp22I	TGATCA	2 cut(s)	822, 1021
Kzo9I	GATC	9 cut(s)	789, 799, 822, 907, 964, 1021, 1135, 1351, 1564
LmnI	GCTCC	5 cut(s)	13, 550, 559, 1066, 1681
Lsp1109I	GCAGC	8 cut(s)	297, 620, 820, 1067, 1283, 1426, 1522, 1768
LweI	GCATC	6 cut(s)	312, 576, 959, 1108, 1351, 1768
MaeI	CTAG	4 cut(s)	23, 147, 1484, 1775
MaeII	ACGT	5 cut(s)	66, 104, 309, 912, 1627
MalI	GATC	9 cut(s)	791, 801, 824, 909, 966, 1023, 1137, 1353, 1566
MboI	GATC	9 cut(s)	789, 799, 822, 907, 964, 1021, 1135, 1351, 1564
MfeI	CAATTG	1 cut(s)	1072
MflI	RGATCY	3 cut(s)	964, 1135, 1351
MhlI	GDGCHC	2 cut(s)	18, 1071
MluCI	AATT	7 cut(s)	161, 184, 754, 826, 1061, 1072, 1690
MlyI	GAGTC	4 cut(s)	116, 351, 1190, 1274
MmeI	TCCRAC	3 cut(s)	150, 1611, 1815
Mph1103I	ATGCAT	1 cut(s)	1474
MroXI	GAANNNNTTC	1 cut(s)	420
MseI	TTAA	4 cut(s)	1331, 1455, 1686, 1800
MspA1I	CMGCKG	2 cut(s)	92, 611
MspI	CCGG	3 cut(s)	77, 175, 1679
MspR9I	CCNGG	4 cut(s)	782, 1156, 1668, 1760
MunI	CAATTG	1 cut(s)	1072
Mva1269I	GAATGC	1 cut(s)	1466
MvaI	CCWGG	4 cut(s)	782, 1156, 1668, 1760
MvnI	CGCG	2 cut(s)	335, 1405
MwoI	GCNNNNNNNGC	7 cut(s)	53, 379, 559, 995, 1235, 1445, 1760
NdeI	CATATG	1 cut(s)	403
NdeII	GATC	9 cut(s)	789, 799, 822, 907, 964, 1021, 1135, 1351, 1564
NlaIII	CATG	9 cut(s)	341, 364, 488, 1015, 1227, 1262, 1319, 1476, 1577
NlaIV	GGNNCC	3 cut(s)	15, 1353, 1376
NsiI	ATGCAT	1 cut(s)	1474
NspI	RCATGY	2 cut(s)	341, 1319
NspV	TTCGAA	1 cut(s)	569
PaeI	GCATGC	1 cut(s)	341
PaqCI	CACCTGC	1 cut(s)	860
PcsI	WCGNNNNNNNCGW	1 cut(s)	677
PctI	GAATGC	1 cut(s)	1466
PdmI	GAANNNNTTC	1 cut(s)	420
PfeI	GAWTC	5 cut(s)	421, 478, 581, 1292, 1597
PflMI	CCANNNNNTGG	1 cut(s)	1224
PfoI	TCCNGGA	1 cut(s)	780
PleI	GAGTC	4 cut(s)	116, 351, 1190, 1274
PmaCI	CACGTG	1 cut(s)	105
PmlI	CACGTG	1 cut(s)	105
PpsI	GAGTC	4 cut(s)	116, 351, 1190, 1274
Ppu21I	YACGTR	1 cut(s)	105
PsiI	TTATAA	1 cut(s)	1184
Psp124BI	GAGCTC	1 cut(s)	1071
Psp6I	CCWGG	4 cut(s)	780, 1154, 1666, 1758
PspCI	CACGTG	1 cut(s)	105
PspFI	CCCAGC	2 cut(s)	373, 875
PspGI	CCWGG	4 cut(s)	780, 1154, 1666, 1758
PspN4I	GGNNCC	3 cut(s)	15, 1353, 1376
PspPI	GGNCC	6 cut(s)	177, 221, 432, 1243, 1542, 1753
PsrI	GAACNNNNNNTAC	2 cut(s)	841, 873
PstI	CTGCAG	2 cut(s)	660, 907
PstNI	CAGNNNCTG	2 cut(s)	373, 875
PsuI	RGATCY	3 cut(s)	964, 1135, 1351
PvuII	CAGCTG	1 cut(s)	611
RsaI	GTAC	4 cut(s)	600, 1091, 1430, 1604
RsaNI	GTAC	4 cut(s)	599, 1090, 1429, 1603
SacI	GAGCTC	1 cut(s)	1071
SalI	GTCGAC	1 cut(s)	68
SaqAI	TTAA	4 cut(s)	1331, 1455, 1686, 1800
Sau3AI	GATC	9 cut(s)	789, 799, 822, 907, 964, 1021, 1135, 1351, 1564
Sau96I	GGNCC	6 cut(s)	177, 221, 432, 1243, 1542, 1753
SchI	GAGTC	4 cut(s)	116, 351, 1190, 1274
ScrFI	CCNGG	4 cut(s)	782, 1156, 1668, 1760
SduI	GDGCHC	2 cut(s)	18, 1071
SfaNI	GCATC	6 cut(s)	312, 576, 959, 1108, 1351, 1768
SfcI	CTRYAG	2 cut(s)	656, 903
SfuI	TTCGAA	1 cut(s)	569
SinI	GGWCC	3 cut(s)	177, 221, 1243
SmlI	CTYRAG	1 cut(s)	554
SmoI	CTYRAG	1 cut(s)	554
SphI	GCATGC	1 cut(s)	341
Sse9I	AATT	7 cut(s)	161, 184, 754, 826, 1061, 1072, 1690
SspMI	CTAG	4 cut(s)	23, 147, 1484, 1775
SstI	GAGCTC	1 cut(s)	1071
StyD4I	CCNGG	4 cut(s)	780, 1154, 1666, 1758
StyI	CCWWGG	6 cut(s)	36, 387, 727, 1113, 1591, 1632
TaaI	ACNGT	5 cut(s)	218, 236, 765, 1089, 1128
TaiI	ACGT	5 cut(s)	69, 107, 312, 915, 1630
TaqI	TCGA	5 cut(s)	69, 569, 584, 671, 1746
TasI	AATT	7 cut(s)	161, 184, 754, 826, 1061, 1072, 1690
TauI	GCSGC	4 cut(s)	56, 92, 430, 433
TfiI	GAWTC	5 cut(s)	421, 478, 581, 1292, 1597
Tru1I	TTAA	4 cut(s)	1331, 1455, 1686, 1800
Tru9I	TTAA	4 cut(s)	1331, 1455, 1686, 1800
TscAI	CASTG	4 cut(s)	474, 497, 1302, 1500
TseI	GCWGC	8 cut(s)	285, 608, 833, 1055, 1271, 1439, 1510, 1781
TspDTI	ATGAA	6 cut(s)	337, 470, 975, 1182, 1379, 1638
TspGWI	ACGGA	1 cut(s)	1195
TspRI	CASTG	4 cut(s)	474, 497, 1302, 1500
Van91I	CCANNNNNTGG	1 cut(s)	1224
VpaK11BI	GGWCC	3 cut(s)	177, 221, 1243
XagI	CCTNNNNNAGG	1 cut(s)	972
XapI	RAATTY	2 cut(s)	184, 754
XceI	RCATGY	2 cut(s)	341, 1319
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1042
XmiI	GTMKAC	4 cut(s)	69, 1082, 1533, 1811
XmnI	GAANNNNTTC	1 cut(s)	420
XspI	CTAG	4 cut(s)	23, 147, 1484, 1775
Zsp2I	ATGCAT	1 cut(s)	1474

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.