Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000157

Orthogroup ID

OG0005455

Physical Location & Seq

Genomic Coordinates Reverse (-)

110392 .. 114288

Gene Structure 3897 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_157G00438440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGTCGGGACAGGAACCCCAACTAGCTAACCACCACCCCAAGGCCGCCGCCAATCTCAACGTCGACCCACCGGAAACCGACGCCGCCGTCCCGTCCACGTGTCATCCCCCGAGGGACTCCGACACCGCCGATGGCGAAGCTAAAAGATTGACCAAATTGGGAAAAAGCCGGTCCAGAAATTTCAAGGTGGAGTCCCCCATGGATTATGGACCTGACCCGGACGGCTACTTGCCTGGTCAACCCGTCTCTTCTTCTTCTTCCTCCCGTGAAGAAAAAGTCAGCAGCCTCAAAACTGGTTTGGTTCATGTTGCGAGGAAGATGCCGAAAAATGCGCATGCCCATTTCATTCTGGGACTAATGTATCAGAGGCTGGGCCAACCTTCAAAGGCTGTTTTGGCATATGAGAAGGCCGAAGAGATTTTGCGCCGGCCCGAGGTTGACATTGATAGGACAGACTTGCTTTCACTGGTTCAAATTCATCATGCGCAGTGTATTATGCTAGATAGTTCGGTGGATGGTAGTTCGGATAAAGAACTTGAACCTCAGGAGCTTGAGGAGATTCTCTCGAAACTAAAAGAGTCGATGCAGTCAGATGTAAGACAGGCAGCGGTATGGAATACTCTCGGTTTGATACTGCTTAAAACTGGCCGTCTGCAGAGTGCCATTTCAGTATTGTCATCTTTGTTAGCATTTGCCCATACCAACTATGATTGCCTTGCAAACCTTGGGATTGCTTACCTTCAAAGTGGAAATTTGGAACTGTCAGAAACATGTTTCCAGGAATTGATCCTCAAAGATCAAAATCATCCCACCGCCTTGATCAATTATGCTGCCCTTCTTTTATGTAGATATGGTTCAGTTGTTGCAGGTGCTGGGGCAAATGCTGGTGGAGATGCTTCTGCAGATCACATTTCTGCTATCAATGTTGCAAAGGAGTGTTTGTTAGCATCCTTGAATGAAGATCCTAAAGCAGGACATATCTGGGGTAATCTTGCAAATGCCTATTATATGACTGGTGATCATAGAAGTTCCAGCAAGTGCTTGGAGAAGGCGGCCAAATTAGAGCTCAATTGTATGTCTACACGATATGCTGTTGCAATGCACCGAACCAAGGATGCAGAACGGCATCAAGATCACAGCGAACTTTCCTGGGCAGGAAATGAAATGGCTTCAGTTATAAGAGATGGAGACTCTGTTTCCGTTGAACTTCCCATAGCATGGGCAGGGCTTGCAATGGTTCACAAAGCCCAGCATGAGATTTCAGCAGCATTTGGCACTGAACCCCTGACAGAGGTAGAAGAACACGCTGATTACAGTTTAAAACAGGCAATAGCTGAGGATCCAGATGATGCTGTGCAATGGCACCAGCTTGGTCTTCATAGCCTTTGTGCACGACAATTCAAAAACTCTCAAAAATACCTCAAAGCTGCAGTTGCCCGTTTTAAAGAATGCAGTTATGCATGGTCAAATCTAGGTATCTCACTGCAACTATCGGAGGAGCCTTCACAAGCGGAAGAAGTATACATGAGGGCCTTGTCATTGGCGACAACTGATCTTGCCCATGCTATATTCTCCAACCTCGGCAATCTGTACCGCCAGCAGAAGCATTATGAACGTGCCAAGGCAATGTTCACGAAATCTCTTGAACTCCAGCCTGGCTATGCTCCGGCATTTAATAATTTGGGTCTTGTATTTGTTGCTGAGGGTCAATGGGAAGAAGCAAAGTTCTGTTTTGACAAGGCTCTCCAGGCAGACCCAATGATGGATGCTGCCAAATCCAACTTGATTAAAGCTGTGTCTACATCAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000291 GO:0000785 GO:0000956 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034655 GO:0035327 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043928 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0055087 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_16 TPR_19 TPR_2 TPR_7 TPR_8

Protein Analysis

603

Amino Acids

66.08

Weight (kDa)

5.76

Isoelectric Point (pI)

48.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_19	PF14559	212 - 270	7.2e-06	Tetratricopeptide repeat
TPR_12	PF13424	487 - 551	2.6e-07	Tetratricopeptide repeat
TPR_12	PF13424	522 - 584	3e-07	Tetratricopeptide repeat
TPR_1	PF00515	523 - 554	1.8e-06	Tetratricopeptide repeat
TPR_1	PF00515	555 - 586	3.9e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005455)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63200 AT5G63200
fragaria_vesca	FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030
malus_domestica	MD06G1160400.v1.1
prunus_persica	Prupe.5G160000_v2.0.a1
pyrus_communis	pycom06g14350
rosa_chinensis	RchiOBHm_Chr5g0027621 RchiOBHm_Chr5g0027631 RchiOBHm_Chr7g0191501
rosa_laevigata	RLG00000004443
rosa_multiflora	Rmu_co8226669.1_g000001 Rmu_sc0002661.1_g000013 Rmu_sc0010599.1_g000002
rosa_roxburghii	Rroxscaffold_157G00438440 Rroxscaffold_3G00263740
rosa_rugosa	Rorug05G0100300 Rorug06G0510500
rosa_samantha	Rh5CG212600 Rh5DG194500 Rh7AG118900 Rh7BG121000 Rh7CG123700 Rh7DG121800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1178
AarI	CACCTGC	1 cut(s)	857
AasI	GACNNNNNNGTC	1 cut(s)	86
Acc16I	TGCGCA	2 cut(s)	333, 486
Acc36I	ACCTGC	1 cut(s)	857
AccB1I	GGYRCC	1 cut(s)	1362
AccB7I	CCANNNNNTGG	1 cut(s)	1218
AccI	GTMKAC	4 cut(s)	63, 1079, 1521, 1799
AciI	CCGC	9 cut(s)	45, 48, 84, 126, 608, 813, 1052, 1511, 1594
AclWI	GGATC	4 cut(s)	781, 956, 1334, 1347
AcoI	YGGCCR	2 cut(s)	646, 1053
AcsI	RAATTY	3 cut(s)	178, 474, 751
AcuI	CTGAAG	1 cut(s)	1155
AcvI	CACGTG	1 cut(s)	99
AcyI	GRCGYC	1 cut(s)	81
AfaI	GTAC	1 cut(s)	1592
AfiI	CCNNNNNNNGG	7 cut(s)	40, 433, 971, 1111, 1218, 1291, 1762
AflIII	ACRYGT	2 cut(s)	98, 770
AgsI	TTSAA	9 cut(s)	184, 384, 473, 539, 743, 955, 1205, 1402, 1646
AjnI	CCWGG	5 cut(s)	232, 777, 1148, 1654, 1746
AjuI	GAANNNNNNNTTGG	2 cut(s)	1613, 1645
AluBI	AGCT	8 cut(s)	26, 140, 550, 1066, 1334, 1369, 1427, 1793
AluI	AGCT	8 cut(s)	26, 140, 550, 1066, 1334, 1369, 1427, 1793
Alw21I	GWGCWC	2 cut(s)	1068, 1393
Alw26I	GTCTC	2 cut(s)	250, 1182
Alw44I	GTGCAC	1 cut(s)	1389
AlwI	GGATC	4 cut(s)	781, 956, 1334, 1347
AlwNI	CAGNNNCTG	2 cut(s)	370, 872
Ama87I	CYCGRG	2 cut(s)	109, 431
AoxI	GGCC	7 cut(s)	42, 373, 408, 428, 646, 1053, 1530
ApaLI	GTGCAC	1 cut(s)	1389
ApeKI	GCWGC	6 cut(s)	282, 605, 830, 1265, 1427, 1769
ApoI	RAATTY	3 cut(s)	178, 474, 751
AspLEI	GCGC	3 cut(s)	334, 426, 487
AspS9I	GGNCC	5 cut(s)	171, 209, 373, 429, 1530
AsuC2I	CCSGG	1 cut(s)	218
AsuHPI	GGTGA	1 cut(s)	1028
AvaI	CYCGRG	2 cut(s)	109, 431
AvaII	GGWCC	2 cut(s)	171, 209
AxyI	CCTNAGG	1 cut(s)	543
BaeGI	GKGCMC	1 cut(s)	1393
BaeI	ACNNNNGTAYC	2 cut(s)	344, 377
BamHI	GGATCC	1 cut(s)	1339
BanI	GGYRCC	1 cut(s)	1362
BanII	GRGCYC	1 cut(s)	1068
BbrPI	CACGTG	1 cut(s)	99
BbsI	GAAGAC	1 cut(s)	1367
Bbv12I	GWGCWC	2 cut(s)	1068, 1393
BbvCI	CCTCAGC	2 cut(s)	1335, 1701
BbvI	GCAGC	6 cut(s)	294, 617, 817, 1277, 1414, 1756
BccI	CCATC	4 cut(s)	125, 509, 1178, 1756
BceAI	ACGGC	4 cut(s)	71, 238, 633, 1139
BcgI	CGANNNNNNTGC	2 cut(s)	301, 335
BciT130I	CCWGG	5 cut(s)	234, 779, 1150, 1656, 1748
BclI	TGATCA	2 cut(s)	819, 1018
BcnI	CCSGG	1 cut(s)	218
BcoDI	GTCTC	2 cut(s)	250, 1182
BfaI	CTAG	3 cut(s)	23, 500, 1472
BfmI	CTRYAG	3 cut(s)	653, 900, 1428
BfuAI	ACCTGC	1 cut(s)	857
Bme1390I	CCNGG	6 cut(s)	218, 234, 779, 1150, 1656, 1748
Bme18I	GGWCC	2 cut(s)	171, 209
BmeT110I	CYCGRG	2 cut(s)	109, 431
BmgT120I	GGNCC	5 cut(s)	171, 209, 373, 429, 1530
BmiI	GGNNCC	4 cut(s)	15, 1341, 1364, 1500
BmrFI	CCNGG	6 cut(s)	218, 234, 779, 1150, 1656, 1748
BmsI	GCATC	8 cut(s)	309, 573, 883, 956, 1105, 1135, 1339, 1756
BpiI	GAAGAC	1 cut(s)	1367
BplI	GAGNNNNNCTC	2 cut(s)	548, 580
BpmI	CTGGAG	2 cut(s)	1634, 1730
Bpu10I	CCTNAGC	2 cut(s)	1335, 1701
BpuEI	CTTGAG	1 cut(s)	572
BpuMI	CCSGG	1 cut(s)	218
BsaAI	YACGTR	1 cut(s)	99
BsaBI	GATNNNNATC	1 cut(s)	801
BsaHI	GRCGYC	1 cut(s)	81
BsaJI	CCNNGG	9 cut(s)	39, 110, 198, 432, 724, 1110, 1149, 1579, 1620
BsaWI	WCCGGW	1 cut(s)	70
BsaXI	ACNNNNNCTCC	4 cut(s)	926, 956, 1179, 1209
Bsc4I	CCNNNNNNNGG	7 cut(s)	40, 433, 971, 1111, 1218, 1291, 1762
Bse118I	RCCGGY	2 cut(s)	168, 426
Bse1I	ACTGG	4 cut(s)	298, 471, 649, 1018
Bse21I	CCTNAGG	1 cut(s)	543
Bse3DI	GCAATG	4 cut(s)	1104, 1239, 1364, 1632
Bse8I	GATNNNNATC	1 cut(s)	801
BseBI	CCWGG	5 cut(s)	234, 779, 1150, 1656, 1748
BseDI	CCNNGG	9 cut(s)	39, 110, 198, 432, 724, 1110, 1149, 1579, 1620
BseGI	GGATG	6 cut(s)	103, 520, 805, 947, 1120, 1771
BseJI	GATNNNNATC	1 cut(s)	801
BseLI	CCNNNNNNNGG	7 cut(s)	40, 433, 971, 1111, 1218, 1291, 1762
BseMI	GCAATG	4 cut(s)	1104, 1239, 1364, 1632
BseMII	CTCAG	3 cut(s)	557, 1326, 1692
BseNI	ACTGG	4 cut(s)	298, 471, 649, 1018
BseRI	GAGGAG	2 cut(s)	569, 1511
BseSI	GKGCMC	1 cut(s)	1393
BseXI	GCAGC	6 cut(s)	294, 617, 817, 1277, 1414, 1756
BseYI	CCCAGC	3 cut(s)	370, 872, 1248
BshFI	GGCC	7 cut(s)	44, 375, 410, 430, 648, 1055, 1532
BshNI	GGYRCC	1 cut(s)	1362
BsiHKAI	GWGCWC	2 cut(s)	1068, 1393
BsiHKCI	CYCGRG	2 cut(s)	109, 431
BsiSI	CCGG	5 cut(s)	71, 169, 218, 427, 1667
BslFI	GGGAC	5 cut(s)	21, 74, 128, 178, 366
BslI	CCNNNNNNNGG	7 cut(s)	40, 433, 971, 1111, 1218, 1291, 1762
BsmAI	GTCTC	2 cut(s)	250, 1182
BsmBI	CGTCTC	1 cut(s)	250
BsmFI	GGGAC	5 cut(s)	21, 74, 128, 178, 366
BsmI	GAATGC	1 cut(s)	1454
BsnI	GGCC	7 cut(s)	44, 375, 410, 430, 648, 1055, 1532
BsoBI	CYCGRG	2 cut(s)	109, 431
Bsp1286I	GDGCHC	2 cut(s)	1068, 1393
Bsp143I	GATC	9 cut(s)	786, 796, 819, 904, 961, 1018, 1132, 1339, 1552
Bsp19I	CCATGG	1 cut(s)	198
BspACI	CCGC	9 cut(s)	45, 48, 84, 126, 608, 813, 1052, 1511, 1594
BspANI	GGCC	7 cut(s)	44, 375, 410, 430, 648, 1055, 1532
BspCNI	CTCAG	3 cut(s)	556, 1327, 1693
BspLI	GGNNCC	4 cut(s)	15, 1341, 1364, 1500
BspMAI	CTGCAG	3 cut(s)	657, 904, 1432
BspMI	ACCTGC	1 cut(s)	857
BspPI	GGATC	4 cut(s)	781, 956, 1334, 1347
BspT107I	GGYRCC	1 cut(s)	1362
BsrDI	GCAATG	4 cut(s)	1104, 1239, 1364, 1632
BsrFI	RCCGGY	2 cut(s)	168, 426
BsrI	ACTGG	4 cut(s)	298, 471, 649, 1018
BssAI	RCCGGY	2 cut(s)	168, 426
BssECI	CCNNGG	9 cut(s)	39, 110, 198, 432, 724, 1110, 1149, 1579, 1620
BssMI	GATC	9 cut(s)	786, 796, 819, 904, 961, 1018, 1132, 1339, 1552
BssNAI	GTATAC	1 cut(s)	1522
BssNI	GRCGYC	1 cut(s)	81
BssT1I	CCWWGG	5 cut(s)	39, 198, 724, 1110, 1620
Bst1107I	GTATAC	1 cut(s)	1522
Bst2UI	CCWGG	5 cut(s)	234, 779, 1150, 1656, 1748
Bst4CI	ACNGT	2 cut(s)	762, 1316
Bst6I	CTCTTC	2 cut(s)	253, 408
BstACI	GRCGYC	1 cut(s)	81
BstAPI	GCANNNNNTGC	1 cut(s)	1229
BstBAI	YACGTR	1 cut(s)	99
BstC8I	GCNNGC	4 cut(s)	336, 428, 1230, 1598
BstDEI	CTNAG	3 cut(s)	543, 1335, 1701
BstDSI	CCRYGG	1 cut(s)	198
BstENI	CCTNNNNNAGG	2 cut(s)	969, 1289
BstF5I	GGATG	6 cut(s)	103, 520, 805, 947, 1120, 1771
BstHHI	GCGC	3 cut(s)	334, 426, 487
BstKTI	GATC	9 cut(s)	789, 799, 822, 907, 964, 1021, 1135, 1342, 1555
BstMAI	GTCTC	2 cut(s)	250, 1182
BstMBI	GATC	9 cut(s)	786, 796, 819, 904, 961, 1018, 1132, 1339, 1552
BstMWI	GCNNNNNNNGC	4 cut(s)	395, 1229, 1433, 1748
BstNI	CCWGG	5 cut(s)	234, 779, 1150, 1656, 1748
BstNSI	RCATGY	2 cut(s)	338, 774
BstSCI	CCNGG	6 cut(s)	216, 232, 777, 1148, 1654, 1746
BstSFI	CTRYAG	3 cut(s)	653, 900, 1428
BstSLI	GKGCMC	1 cut(s)	1393
BstV1I	GCAGC	6 cut(s)	294, 617, 817, 1277, 1414, 1756
BstV2I	GAAGAC	1 cut(s)	1367
BstX2I	RGATCY	2 cut(s)	961, 1339
BstYI	RGATCY	2 cut(s)	961, 1339
BstZ17I	GTATAC	1 cut(s)	1522
Bsu36I	CCTNAGG	1 cut(s)	543
BsuRI	GGCC	7 cut(s)	44, 375, 410, 430, 648, 1055, 1532
BtgI	CCRYGG	1 cut(s)	198
BtsCI	GGATG	6 cut(s)	103, 520, 805, 947, 1120, 1771
BtsI	GCAGTG	2 cut(s)	494, 1481
BtsIMutI	CAGTG	4 cut(s)	464, 494, 1275, 1481
BveI	ACCTGC	1 cut(s)	857
Cac8I	GCNNGC	4 cut(s)	336, 428, 1230, 1598
CaiI	CAGNNNCTG	2 cut(s)	370, 872
CfoI	GCGC	3 cut(s)	334, 426, 487
Cfr10I	RCCGGY	2 cut(s)	168, 426
Cfr13I	GGNCC	5 cut(s)	171, 209, 373, 429, 1530
CseI	GACGC	1 cut(s)	89
Csp6I	GTAC	1 cut(s)	1591
CviQI	GTAC	1 cut(s)	1591
DdeI	CTNAG	3 cut(s)	543, 1335, 1701
DpnI	GATC	9 cut(s)	788, 798, 821, 906, 963, 1020, 1134, 1341, 1554
DpnII	GATC	9 cut(s)	786, 796, 819, 904, 961, 1018, 1132, 1339, 1552
DraI	TTTAAA	2 cut(s)	1320, 1444
DrdI	GACNNNNNNGTC	1 cut(s)	86
DseDI	GACNNNNNNGTC	1 cut(s)	86
EaeI	YGGCCR	2 cut(s)	646, 1053
Eam1104I	CTCTTC	2 cut(s)	253, 408
EarI	CTCTTC	2 cut(s)	253, 408
Ecl136II	GAGCTC	1 cut(s)	1066
Eco130I	CCWWGG	5 cut(s)	39, 198, 724, 1110, 1620
Eco24I	GRGCYC	1 cut(s)	1068
Eco47I	GGWCC	2 cut(s)	171, 209
Eco53kI	GAGCTC	1 cut(s)	1066
Eco57I	CTGAAG	1 cut(s)	1155
Eco72I	CACGTG	1 cut(s)	99
Eco81I	CCTNAGG	1 cut(s)	543
Eco88I	CYCGRG	2 cut(s)	109, 431
EcoICRI	GAGCTC	1 cut(s)	1066
EcoNI	CCTNNNNNAGG	2 cut(s)	969, 1289
EcoO109I	RGGNCCY	1 cut(s)	1530
EcoRII	CCWGG	5 cut(s)	232, 777, 1148, 1654, 1746
EcoT14I	CCWWGG	5 cut(s)	39, 198, 724, 1110, 1620
EcoT22I	ATGCAT	1 cut(s)	1462
EcoT38I	GRGCYC	1 cut(s)	1068
ErhI	CCWWGG	5 cut(s)	39, 198, 724, 1110, 1620
Esp3I	CGTCTC	1 cut(s)	250
FaqI	GGGAC	5 cut(s)	21, 74, 128, 178, 366
FauNDI	CATATG	1 cut(s)	400
FbaI	TGATCA	2 cut(s)	819, 1018
FblI	GTMKAC	4 cut(s)	63, 1079, 1521, 1799
FokI	GGATG	6 cut(s)	90, 527, 792, 934, 1127, 1778
FriOI	GRGCYC	1 cut(s)	1068
FspAI	RTGCGCAY	1 cut(s)	333
FspBI	CTAG	3 cut(s)	23, 500, 1472
FspI	TGCGCA	2 cut(s)	333, 486
GlaI	GCGC	3 cut(s)	333, 425, 486
GsaI	CCCAGC	3 cut(s)	374, 876, 1252
GsuI	CTGGAG	2 cut(s)	1634, 1730
HaeIII	GGCC	7 cut(s)	44, 375, 410, 430, 648, 1055, 1532
HapII	CCGG	5 cut(s)	71, 169, 218, 427, 1667
HgaI	GACGC	1 cut(s)	89
HhaI	GCGC	3 cut(s)	334, 426, 487
Hin1I	GRCGYC	1 cut(s)	81
Hin6I	GCGC	3 cut(s)	332, 424, 485
HinP1I	GCGC	3 cut(s)	332, 424, 485
HincII	GTYRAC	3 cut(s)	64, 239, 439
HindII	GTYRAC	3 cut(s)	64, 239, 439
HinfI	GANTC	5 cut(s)	116, 191, 559, 578, 1190
HpaII	CCGG	5 cut(s)	71, 169, 218, 427, 1667
HphI	GGTGA	1 cut(s)	1028
Hpy188I	TCNGA	6 cut(s)	121, 366, 526, 592, 766, 1495
Hpy188III	TCNNGA	9 cut(s)	6, 174, 545, 565, 1130, 1343, 1633, 1643, 1806
Hpy99I	CGWCG	2 cut(s)	65, 83
HpyAV	CCTTC	6 cut(s)	390, 400, 749, 845, 1042, 1512
HpyCH4III	ACNGT	2 cut(s)	762, 1316
HpyCH4IV	ACGT	3 cut(s)	60, 98, 1615
HpyF10VI	GCNNNNNNNGC	4 cut(s)	395, 1229, 1433, 1748
HpyF3I	CTNAG	3 cut(s)	543, 1335, 1701
HpySE526I	ACGT	3 cut(s)	60, 98, 1615
Hsp92I	GRCGYC	1 cut(s)	81
HspAI	GCGC	3 cut(s)	332, 424, 485
KroI	GCCGGC	1 cut(s)	426
KroNI	GCCGGC	1 cut(s)	428
Ksp22I	TGATCA	2 cut(s)	819, 1018
Kzo9I	GATC	9 cut(s)	786, 796, 819, 904, 961, 1018, 1132, 1339, 1552
LmnI	GCTCC	3 cut(s)	547, 1498, 1669
Lsp1109I	GCAGC	6 cut(s)	294, 617, 817, 1277, 1414, 1756
LweI	GCATC	8 cut(s)	309, 573, 883, 956, 1105, 1135, 1339, 1756
MaeI	CTAG	3 cut(s)	23, 500, 1472
MaeII	ACGT	3 cut(s)	60, 98, 1615
MalI	GATC	9 cut(s)	788, 798, 821, 906, 963, 1020, 1134, 1341, 1554
MboI	GATC	9 cut(s)	786, 796, 819, 904, 961, 1018, 1132, 1339, 1552
MfeI	CAATTG	1 cut(s)	1069
MflI	RGATCY	2 cut(s)	961, 1339
MhlI	GDGCHC	2 cut(s)	1068, 1393
MlyI	GAGTC	4 cut(s)	110, 200, 587, 1184
MmeI	TCCRAC	3 cut(s)	144, 1599, 1803
Mph1103I	ATGCAT	1 cut(s)	1462
MroNI	GCCGGC	1 cut(s)	426
MseI	TTAA	5 cut(s)	639, 1319, 1443, 1674, 1788
MspA1I	CMGCKG	1 cut(s)	608
MspI	CCGG	5 cut(s)	71, 169, 218, 427, 1667
MspR9I	CCNGG	6 cut(s)	218, 234, 779, 1150, 1656, 1748
MunI	CAATTG	1 cut(s)	1069
Mva1269I	GAATGC	1 cut(s)	1454
MvaI	CCWGG	5 cut(s)	234, 779, 1150, 1656, 1748
MwoI	GCNNNNNNNGC	4 cut(s)	395, 1229, 1433, 1748
NaeI	GCCGGC	1 cut(s)	428
NciI	CCSGG	1 cut(s)	218
NcoI	CCATGG	1 cut(s)	198
NdeI	CATATG	1 cut(s)	400
NdeII	GATC	9 cut(s)	786, 796, 819, 904, 961, 1018, 1132, 1339, 1552
NgoMIV	GCCGGC	1 cut(s)	426
NlaIV	GGNNCC	4 cut(s)	15, 1341, 1364, 1500
NmeAIII	GCCGAG	1 cut(s)	1560
NsbI	TGCGCA	2 cut(s)	333, 486
NsiI	ATGCAT	1 cut(s)	1462
NspI	RCATGY	2 cut(s)	338, 774
PaeI	GCATGC	1 cut(s)	338
PaqCI	CACCTGC	1 cut(s)	857
PciI	ACATGT	1 cut(s)	770
PctI	GAATGC	1 cut(s)	1454
PdiI	GCCGGC	1 cut(s)	428
PfeI	GAWTC	1 cut(s)	559
PflMI	CCANNNNNTGG	1 cut(s)	1218
PfoI	TCCNGGA	1 cut(s)	777
PleI	GAGTC	4 cut(s)	110, 199, 586, 1184
PmaCI	CACGTG	1 cut(s)	99
PmlI	CACGTG	1 cut(s)	99
PpsI	GAGTC	4 cut(s)	110, 199, 586, 1184
Ppu21I	YACGTR	1 cut(s)	99
PscI	ACATGT	1 cut(s)	770
PsiI	TTATAA	1 cut(s)	1178
Psp124BI	GAGCTC	1 cut(s)	1068
Psp6I	CCWGG	5 cut(s)	232, 777, 1148, 1654, 1746
PspCI	CACGTG	1 cut(s)	99
PspFI	CCCAGC	3 cut(s)	370, 872, 1248
PspGI	CCWGG	5 cut(s)	232, 777, 1148, 1654, 1746
PspN4I	GGNNCC	4 cut(s)	15, 1341, 1364, 1500
PspPI	GGNCC	5 cut(s)	171, 209, 373, 429, 1530
PsrI	GAACNNNNNNTAC	2 cut(s)	838, 870
PstI	CTGCAG	3 cut(s)	657, 904, 1432
PstNI	CAGNNNCTG	2 cut(s)	370, 872
PsuI	RGATCY	2 cut(s)	961, 1339
RsaI	GTAC	1 cut(s)	1592
RsaNI	GTAC	1 cut(s)	1591
SacI	GAGCTC	1 cut(s)	1068
SalI	GTCGAC	1 cut(s)	62
SaqAI	TTAA	5 cut(s)	639, 1319, 1443, 1674, 1788
Sau3AI	GATC	9 cut(s)	786, 796, 819, 904, 961, 1018, 1132, 1339, 1552
Sau96I	GGNCC	5 cut(s)	171, 209, 373, 429, 1530
SchI	GAGTC	4 cut(s)	110, 200, 587, 1184
ScrFI	CCNGG	6 cut(s)	218, 234, 779, 1150, 1656, 1748
SduI	GDGCHC	2 cut(s)	1068, 1393
SfaNI	GCATC	8 cut(s)	309, 573, 883, 956, 1105, 1135, 1339, 1756
SfcI	CTRYAG	3 cut(s)	653, 900, 1428
SinI	GGWCC	2 cut(s)	171, 209
SmlI	CTYRAG	1 cut(s)	551
SmoI	CTYRAG	1 cut(s)	551
SphI	GCATGC	1 cut(s)	338
SsiI	CCGC	9 cut(s)	45, 48, 84, 126, 608, 813, 1052, 1511, 1594
SspMI	CTAG	3 cut(s)	23, 500, 1472
SstI	GAGCTC	1 cut(s)	1068
StyD4I	CCNGG	6 cut(s)	216, 232, 777, 1148, 1654, 1746
StyI	CCWWGG	5 cut(s)	39, 198, 724, 1110, 1620
TaaI	ACNGT	2 cut(s)	762, 1316
TaiI	ACGT	3 cut(s)	63, 101, 1618
TaqI	TCGA	3 cut(s)	63, 566, 581
TauI	GCSGC	4 cut(s)	47, 50, 86, 1055
TfiI	GAWTC	1 cut(s)	559
Tru1I	TTAA	5 cut(s)	639, 1319, 1443, 1674, 1788
Tru9I	TTAA	5 cut(s)	639, 1319, 1443, 1674, 1788
TscAI	CASTG	4 cut(s)	471, 494, 1282, 1488
TseI	GCWGC	6 cut(s)	282, 605, 830, 1265, 1427, 1769
TspDTI	ATGAA	7 cut(s)	293, 334, 467, 972, 1176, 1367, 1626
TspGWI	ACGGA	1 cut(s)	1189
TspRI	CASTG	4 cut(s)	471, 494, 1282, 1488
Van91I	CCANNNNNTGG	1 cut(s)	1218
VneI	GTGCAC	1 cut(s)	1389
VpaK11BI	GGWCC	2 cut(s)	171, 209
XagI	CCTNNNNNAGG	2 cut(s)	969, 1289
XapI	RAATTY	3 cut(s)	178, 474, 751
XceI	RCATGY	2 cut(s)	338, 774
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1039
XmiI	GTMKAC	4 cut(s)	63, 1079, 1521, 1799
XspI	CTAG	3 cut(s)	23, 500, 1472
Zsp2I	ATGCAT	1 cut(s)	1462

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.