Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0005455

Physical Location & Seq

Genomic Coordinates Reverse (-)

10334645 .. 10338547

Gene Structure 3903 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG121800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGTCGGGACAGGAACCCCAACTAGCTAACCACCACCCCAAGGCCGCCGCCAATCTCAACGTCGACCCACCGGAGACCGACGCCGCCGTCCCTTCCACGTGTCATCCCCCGAGGGACTCCGACGCCGCCGATGGCGAAGCTAAAAGATTGACCAAATTGGGAAAAAGCCGGTCCAGAAATTTCAAGGTGGAGTCCCCCATGGATTATGGACCTGACCCAGACGGCTACTTGCCTTTGCCTGGTCAACCCGTCTCTTCTTCTTCTTCCTCCCGTGAAGAAAAAGTCAGCAGCCTCAAAACTGGTTTGGTTCATGTTGCGAGGAAGATGCCGAAAAATGCGCATGCCCATTTCATTCTGGGACTAATGTATCAGAGGCTGGGTCAGCCTTCAAAGGCTGTTTTGGCATATGAGAAGGCCGAAGAGATTTTGCGCCGGCCCGAGGTTGACATTGATAGGACAGAGTTGCTTTCACTGGTTCAAATTCATCATGCGCAGTGTATTATGCTAGAGAGTTCGGTGGATGGTAGTTCGGATGAAGAACTTGAACCTCAGGGGCTTGAGGAGATTCTCTCGAAACTAAAAGAATCGATGCAGTCAGATGTAAGACAGGCAGCGGTATGGAATACTCTCGGTTTGATACTGCTTAAAACTGGCCGTCTGCAGAGTGCCATTTTGGTATTGTCATCTTTGTTAGCATTTGCCCCTACCAACTATGATTGCCTTGCAAACCTTGGGATTGCTTACCTTCAAAGTGGAAATTTGGAACTGTCAGAAAAATGTTTCCAGGAATTGATCCTCAAAGATCAAAATCATCCCACCGCCTTGATCAATTATGCTGCCATTCTTTTATGTAGATATGGTTCAGTTGTTGCAGGTGCTGGGGCAAATGCTGGTGGAGGTGCTTCTGCAGATCACATTTCTGCTATCAATGTTGCAAAGGAGTGTCTGTTAGCATCCTTGAATGAAGATCCTAAAGCAGGACATATCTGGGCTAATCTTGCAAATGCCTATTATATGACCGGTGATCATAGAAGTTCCAGCAAGTGCTTGGAGAAGGCGGCCAAATTAGAGCTCAATTGTATGTCTACACGATATGCTGTTGCAATTCACCGAACCAAGGATGCAGAACGGCATCAAGATCCCCACGAACTTTACTGGGCAGGAAATGAAATGGCTTCAGTTATAAGAGATGGAGACTCTGTTTCTGTTGAACTTCCCATAGCATGGGCTGGGCTTGCCATGGTTCACAAAGCCCAACATGAGATTTCAGCAGCATTGGCCACTGAACAGAATGCCCTGACAGAGGTGGAAGAACACGCTGATTACAGTTTAAAACAGGTAATCACAAAAGAGCTATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000291 GO:0000785 GO:0000956 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034655 GO:0035327 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043928 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0055087 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_16 TPR_19 TPR_2 TPR_7 TPR_8

Protein Analysis

453

Amino Acids

49.19

Weight (kDa)

5.64

Isoelectric Point (pI)

52.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_19	PF14559	214 - 272	2.4e-07	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005455)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63200 AT5G63200
fragaria_vesca	FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030
malus_domestica	MD06G1160400.v1.1
prunus_persica	Prupe.5G160000_v2.0.a1
pyrus_communis	pycom06g14350
rosa_chinensis	RchiOBHm_Chr5g0027621 RchiOBHm_Chr5g0027631 RchiOBHm_Chr7g0191501
rosa_laevigata	RLG00000004443
rosa_multiflora	Rmu_co8226669.1_g000001 Rmu_sc0002661.1_g000013 Rmu_sc0010599.1_g000002
rosa_roxburghii	Rroxscaffold_157G00438440 Rroxscaffold_3G00263740
rosa_rugosa	Rorug05G0100300 Rorug06G0510500
rosa_samantha	Rh5CG212600 Rh5DG194500 Rh7AG118900 Rh7BG121000 Rh7CG123700 Rh7DG121800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1184
AarI	CACCTGC	1 cut(s)	863
AasI	GACNNNNNNGTC	1 cut(s)	86
Acc16I	TGCGCA	2 cut(s)	339, 492
Acc36I	ACCTGC	1 cut(s)	863
AccB7I	CCANNNNNTGG	1 cut(s)	1224
AccI	GTMKAC	2 cut(s)	63, 1085
AciI	CCGC	7 cut(s)	45, 48, 84, 126, 614, 819, 1058
AclWI	GGATC	3 cut(s)	787, 962, 1133
AcoI	YGGCCR	3 cut(s)	652, 1059, 1278
AcsI	RAATTY	3 cut(s)	178, 480, 757
AcuI	CTGAAG	1 cut(s)	1161
AcvI	CACGTG	1 cut(s)	99
AcyI	GRCGYC	2 cut(s)	81, 123
AfiI	CCNNNNNNNGG	7 cut(s)	40, 239, 439, 977, 1117, 1224, 1303
AflIII	ACRYGT	1 cut(s)	98
AgeI	ACCGGT	1 cut(s)	1019
AgsI	TTSAA	7 cut(s)	184, 390, 479, 545, 749, 961, 1211
AjnI	CCWGG	2 cut(s)	238, 783
AluBI	AGCT	4 cut(s)	26, 140, 1072, 1354
AluI	AGCT	4 cut(s)	26, 140, 1072, 1354
Alw21I	GWGCWC	1 cut(s)	1074
Alw26I	GTCTC	3 cut(s)	68, 256, 1188
AlwI	GGATC	3 cut(s)	787, 962, 1133
AlwNI	CAGNNNCTG	2 cut(s)	376, 878
Ama87I	CYCGRG	2 cut(s)	109, 437
AoxI	GGCC	6 cut(s)	42, 414, 434, 652, 1059, 1278
ApeKI	GCWGC	4 cut(s)	288, 611, 836, 1271
ApoI	RAATTY	3 cut(s)	178, 480, 757
AsiGI	ACCGGT	1 cut(s)	1019
AspLEI	GCGC	3 cut(s)	340, 432, 493
AspS9I	GGNCC	3 cut(s)	171, 209, 435
AsuHPI	GGTGA	2 cut(s)	1034, 1100
AvaI	CYCGRG	2 cut(s)	109, 437
AvaII	GGWCC	2 cut(s)	171, 209
AxyI	CCTNAGG	1 cut(s)	549
BaeI	ACNNNNGTAYC	2 cut(s)	350, 383
BalI	TGGCCA	1 cut(s)	1280
BanII	GRGCYC	1 cut(s)	1074
BbrPI	CACGTG	1 cut(s)	99
Bbv12I	GWGCWC	1 cut(s)	1074
BbvI	GCAGC	4 cut(s)	300, 623, 823, 1283
BccI	CCATC	3 cut(s)	125, 515, 1184
BceAI	ACGGC	4 cut(s)	71, 238, 639, 1145
BcgI	CGANNNNNNTGC	2 cut(s)	307, 341
BciT130I	CCWGG	2 cut(s)	240, 785
BclI	TGATCA	2 cut(s)	825, 1024
BcoDI	GTCTC	3 cut(s)	68, 256, 1188
BfaI	CTAG	2 cut(s)	23, 506
BfmI	CTRYAG	2 cut(s)	659, 906
BfuAI	ACCTGC	1 cut(s)	863
BisI	GCNGC	9 cut(s)	45, 48, 84, 126, 289, 612, 837, 1059, 1272
BlsI	GCNGC	9 cut(s)	46, 49, 85, 127, 290, 613, 838, 1060, 1273
Bme1390I	CCNGG	2 cut(s)	240, 785
Bme18I	GGWCC	2 cut(s)	171, 209
BmeT110I	CYCGRG	2 cut(s)	109, 437
BmgT120I	GGNCC	3 cut(s)	171, 209, 435
BmiI	GGNNCC	1 cut(s)	15
BmrFI	CCNGG	2 cut(s)	240, 785
BmrI	ACTGGG	1 cut(s)	1165
BmsI	GCATC	5 cut(s)	315, 579, 962, 1111, 1141
BmuI	ACTGGG	1 cut(s)	1165
BplI	GAGNNNNNCTC	2 cut(s)	554, 586
BpuEI	CTTGAG	1 cut(s)	578
Bsa29I	ATCGAT	1 cut(s)	587
BsaAI	YACGTR	1 cut(s)	99
BsaBI	GATNNNNATC	1 cut(s)	807
BsaHI	GRCGYC	2 cut(s)	81, 123
BsaI	GGTCTC	1 cut(s)	68
BsaJI	CCNNGG	7 cut(s)	39, 110, 198, 438, 730, 1116, 1239
BsaWI	WCCGGW	2 cut(s)	70, 1019
BsaXI	ACNNNNNCTCC	4 cut(s)	932, 962, 1185, 1215
Bsc4I	CCNNNNNNNGG	7 cut(s)	40, 239, 439, 977, 1117, 1224, 1303
Bse118I	RCCGGY	3 cut(s)	168, 432, 1019
Bse1I	ACTGG	4 cut(s)	304, 477, 655, 1160
Bse21I	CCTNAGG	1 cut(s)	549
Bse8I	GATNNNNATC	1 cut(s)	807
BseBI	CCWGG	2 cut(s)	240, 785
BseCI	ATCGAT	1 cut(s)	587
BseDI	CCNNGG	7 cut(s)	39, 110, 198, 438, 730, 1116, 1239
BseGI	GGATG	6 cut(s)	103, 526, 538, 811, 953, 1126
BseJI	GATNNNNATC	1 cut(s)	807
BseLI	CCNNNNNNNGG	7 cut(s)	40, 239, 439, 977, 1117, 1224, 1303
BseMII	CTCAG	1 cut(s)	563
BseNI	ACTGG	4 cut(s)	304, 477, 655, 1160
BseRI	GAGGAG	1 cut(s)	575
BseXI	GCAGC	4 cut(s)	300, 623, 823, 1283
BseYI	CCCAGC	3 cut(s)	376, 878, 1229
BshFI	GGCC	6 cut(s)	44, 416, 436, 654, 1061, 1280
BshTI	ACCGGT	1 cut(s)	1019
BshVI	ATCGAT	1 cut(s)	587
BsiHKAI	GWGCWC	1 cut(s)	1074
BsiHKCI	CYCGRG	2 cut(s)	109, 437
BsiSI	CCGG	4 cut(s)	71, 169, 433, 1020
BslFI	GGGAC	5 cut(s)	21, 74, 128, 178, 372
BslI	CCNNNNNNNGG	7 cut(s)	40, 239, 439, 977, 1117, 1224, 1303
BsmAI	GTCTC	3 cut(s)	68, 256, 1188
BsmBI	CGTCTC	1 cut(s)	256
BsmFI	GGGAC	5 cut(s)	21, 74, 128, 178, 372
BsmI	GAATGC	1 cut(s)	1297
BsnI	GGCC	6 cut(s)	44, 416, 436, 654, 1061, 1280
Bso31I	GGTCTC	1 cut(s)	68
BsoBI	CYCGRG	2 cut(s)	109, 437
Bsp1286I	GDGCHC	1 cut(s)	1074
Bsp143I	GATC	7 cut(s)	792, 802, 825, 910, 967, 1024, 1138
Bsp19I	CCATGG	2 cut(s)	198, 1239
BspACI	CCGC	7 cut(s)	45, 48, 84, 126, 614, 819, 1058
BspANI	GGCC	6 cut(s)	44, 416, 436, 654, 1061, 1280
BspCNI	CTCAG	1 cut(s)	562
BspDI	ATCGAT	1 cut(s)	587
BspHI	TCATGA	1 cut(s)	1358
BspLI	GGNNCC	1 cut(s)	15
BspMAI	CTGCAG	2 cut(s)	663, 910
BspMI	ACCTGC	1 cut(s)	863
BspPI	GGATC	3 cut(s)	787, 962, 1133
BspTNI	GGTCTC	1 cut(s)	68
BsrFI	RCCGGY	3 cut(s)	168, 432, 1019
BsrI	ACTGG	4 cut(s)	304, 477, 655, 1160
BssAI	RCCGGY	3 cut(s)	168, 432, 1019
BssECI	CCNNGG	7 cut(s)	39, 110, 198, 438, 730, 1116, 1239
BssMI	GATC	7 cut(s)	792, 802, 825, 910, 967, 1024, 1138
BssNI	GRCGYC	2 cut(s)	81, 123
BssT1I	CCWWGG	5 cut(s)	39, 198, 730, 1116, 1239
Bst2UI	CCWGG	2 cut(s)	240, 785
Bst4CI	ACNGT	2 cut(s)	768, 1328
Bst6I	CTCTTC	2 cut(s)	259, 414
BstACI	GRCGYC	2 cut(s)	81, 123
BstBAI	YACGTR	1 cut(s)	99
BstC8I	GCNNGC	3 cut(s)	342, 434, 1236
BstDEI	CTNAG	1 cut(s)	549
BstDSI	CCRYGG	2 cut(s)	198, 1239
BstENI	CCTNNNNNAGG	2 cut(s)	975, 1301
BstF5I	GGATG	6 cut(s)	103, 526, 538, 811, 953, 1126
BstHHI	GCGC	3 cut(s)	340, 432, 493
BstKTI	GATC	7 cut(s)	795, 805, 828, 913, 970, 1027, 1141
BstMAI	GTCTC	3 cut(s)	68, 256, 1188
BstMBI	GATC	7 cut(s)	792, 802, 825, 910, 967, 1024, 1138
BstMWI	GCNNNNNNNGC	5 cut(s)	382, 401, 998, 1235, 1277
BstNI	CCWGG	2 cut(s)	240, 785
BstNSI	RCATGY	1 cut(s)	344
BstSCI	CCNGG	2 cut(s)	238, 783
BstSFI	CTRYAG	2 cut(s)	659, 906
BstV1I	GCAGC	4 cut(s)	300, 623, 823, 1283
BstX2I	RGATCY	2 cut(s)	967, 1138
BstYI	RGATCY	2 cut(s)	967, 1138
Bsu15I	ATCGAT	1 cut(s)	587
Bsu36I	CCTNAGG	1 cut(s)	549
BsuRI	GGCC	6 cut(s)	44, 416, 436, 654, 1061, 1280
BsuTUI	ATCGAT	1 cut(s)	587
BtgI	CCRYGG	2 cut(s)	198, 1239
BtsCI	GGATG	6 cut(s)	103, 526, 538, 811, 953, 1126
BtsI	GCAGTG	1 cut(s)	500
BtsIMutI	CAGTG	3 cut(s)	470, 500, 1281
BveI	ACCTGC	1 cut(s)	863
Cac8I	GCNNGC	3 cut(s)	342, 434, 1236
CaiI	CAGNNNCTG	2 cut(s)	376, 878
CciI	TCATGA	1 cut(s)	1358
CfoI	GCGC	3 cut(s)	340, 432, 493
Cfr10I	RCCGGY	3 cut(s)	168, 432, 1019
Cfr13I	GGNCC	3 cut(s)	171, 209, 435
ClaI	ATCGAT	1 cut(s)	587
CseI	GACGC	2 cut(s)	89, 131
CspAI	ACCGGT	1 cut(s)	1019
CviAII	CATG	8 cut(s)	199, 311, 341, 488, 1224, 1240, 1259, 1359
DdeI	CTNAG	1 cut(s)	549
DpnI	GATC	7 cut(s)	794, 804, 827, 912, 969, 1026, 1140
DpnII	GATC	7 cut(s)	792, 802, 825, 910, 967, 1024, 1138
DraI	TTTAAA	1 cut(s)	1332
DrdI	GACNNNNNNGTC	1 cut(s)	86
DseDI	GACNNNNNNGTC	1 cut(s)	86
EaeI	YGGCCR	3 cut(s)	652, 1059, 1278
Eam1104I	CTCTTC	2 cut(s)	259, 414
EarI	CTCTTC	2 cut(s)	259, 414
Ecl136II	GAGCTC	1 cut(s)	1072
Eco130I	CCWWGG	5 cut(s)	39, 198, 730, 1116, 1239
Eco24I	GRGCYC	1 cut(s)	1074
Eco31I	GGTCTC	1 cut(s)	68
Eco47I	GGWCC	2 cut(s)	171, 209
Eco53kI	GAGCTC	1 cut(s)	1072
Eco57I	CTGAAG	1 cut(s)	1161
Eco72I	CACGTG	1 cut(s)	99
Eco81I	CCTNAGG	1 cut(s)	549
Eco88I	CYCGRG	2 cut(s)	109, 437
EcoICRI	GAGCTC	1 cut(s)	1072
EcoNI	CCTNNNNNAGG	2 cut(s)	975, 1301
EcoRII	CCWGG	2 cut(s)	238, 783
EcoT14I	CCWWGG	5 cut(s)	39, 198, 730, 1116, 1239
EcoT38I	GRGCYC	1 cut(s)	1074
ErhI	CCWWGG	5 cut(s)	39, 198, 730, 1116, 1239
Esp3I	CGTCTC	1 cut(s)	256
FaeI	CATG	8 cut(s)	202, 314, 344, 491, 1227, 1243, 1262, 1362
FaqI	GGGAC	5 cut(s)	21, 74, 128, 178, 372
FatI	CATG	8 cut(s)	198, 310, 340, 487, 1223, 1239, 1258, 1358
FauNDI	CATATG	1 cut(s)	406
FbaI	TGATCA	2 cut(s)	825, 1024
FblI	GTMKAC	2 cut(s)	63, 1085
Fnu4HI	GCNGC	9 cut(s)	45, 48, 84, 126, 289, 612, 837, 1059, 1272
FokI	GGATG	6 cut(s)	90, 533, 545, 798, 940, 1133
FriOI	GRGCYC	1 cut(s)	1074
Fsp4HI	GCNGC	9 cut(s)	45, 48, 84, 126, 289, 612, 837, 1059, 1272
FspAI	RTGCGCAY	1 cut(s)	339
FspBI	CTAG	2 cut(s)	23, 506
FspI	TGCGCA	2 cut(s)	339, 492
GlaI	GCGC	3 cut(s)	339, 431, 492
GluI	GCNGC	9 cut(s)	45, 48, 84, 126, 289, 612, 837, 1059, 1272
GsaI	CCCAGC	3 cut(s)	380, 882, 1233
HaeIII	GGCC	6 cut(s)	44, 416, 436, 654, 1061, 1280
HapII	CCGG	4 cut(s)	71, 169, 433, 1020
HgaI	GACGC	2 cut(s)	89, 131
HhaI	GCGC	3 cut(s)	340, 432, 493
Hin1I	GRCGYC	2 cut(s)	81, 123
Hin1II	CATG	8 cut(s)	202, 314, 344, 491, 1227, 1243, 1262, 1362
Hin6I	GCGC	3 cut(s)	338, 430, 491
HinP1I	GCGC	3 cut(s)	338, 430, 491
HincII	GTYRAC	3 cut(s)	64, 245, 445
HindII	GTYRAC	3 cut(s)	64, 245, 445
HinfI	GANTC	5 cut(s)	116, 191, 565, 584, 1196
HpaII	CCGG	4 cut(s)	71, 169, 433, 1020
HphI	GGTGA	2 cut(s)	1034, 1100
Hpy166II	GTNNAC	5 cut(s)	64, 245, 445, 1086, 1246
Hpy188I	TCNGA	5 cut(s)	121, 372, 532, 598, 772
Hpy188III	TCNNGA	5 cut(s)	6, 174, 571, 1136, 1359
Hpy8I	GTNNAC	5 cut(s)	64, 245, 445, 1086, 1246
Hpy99I	CGWCG	3 cut(s)	65, 83, 125
HpyAV	CCTTC	5 cut(s)	102, 396, 406, 755, 1048
HpyCH4III	ACNGT	2 cut(s)	768, 1328
HpyCH4IV	ACGT	2 cut(s)	60, 98
HpyCH4V	TGCA	9 cut(s)	592, 661, 725, 872, 908, 935, 1001, 1103, 1124
HpyF10VI	GCNNNNNNNGC	5 cut(s)	382, 401, 998, 1235, 1277
HpyF3I	CTNAG	1 cut(s)	549
HpySE526I	ACGT	2 cut(s)	60, 98
Hsp92I	GRCGYC	2 cut(s)	81, 123
Hsp92II	CATG	8 cut(s)	202, 314, 344, 491, 1227, 1243, 1262, 1362
HspAI	GCGC	3 cut(s)	338, 430, 491
KroI	GCCGGC	1 cut(s)	432
KroNI	GCCGGC	1 cut(s)	434
Ksp22I	TGATCA	2 cut(s)	825, 1024
Kzo9I	GATC	7 cut(s)	792, 802, 825, 910, 967, 1024, 1138
Lsp1109I	GCAGC	4 cut(s)	300, 623, 823, 1283
LweI	GCATC	5 cut(s)	315, 579, 962, 1111, 1141
MaeI	CTAG	2 cut(s)	23, 506
MaeII	ACGT	2 cut(s)	60, 98
MalI	GATC	7 cut(s)	794, 804, 827, 912, 969, 1026, 1140
MboI	GATC	7 cut(s)	792, 802, 825, 910, 967, 1024, 1138
MfeI	CAATTG	1 cut(s)	1075
MflI	RGATCY	2 cut(s)	967, 1138
MhlI	GDGCHC	1 cut(s)	1074
MlsI	TGGCCA	1 cut(s)	1280
MluCI	AATT	9 cut(s)	155, 178, 480, 757, 788, 829, 1064, 1075, 1104
MluNI	TGGCCA	1 cut(s)	1280
MlyI	GAGTC	3 cut(s)	110, 200, 1190
MmeI	TCCRAC	1 cut(s)	144
Mox20I	TGGCCA	1 cut(s)	1280
MroNI	GCCGGC	1 cut(s)	432
MscI	TGGCCA	1 cut(s)	1280
MseI	TTAA	2 cut(s)	645, 1331
Msp20I	TGGCCA	1 cut(s)	1280
MspA1I	CMGCKG	1 cut(s)	614
MspI	CCGG	4 cut(s)	71, 169, 433, 1020
MspR9I	CCNGG	2 cut(s)	240, 785
MunI	CAATTG	1 cut(s)	1075
Mva1269I	GAATGC	1 cut(s)	1297
MvaI	CCWGG	2 cut(s)	240, 785
MwoI	GCNNNNNNNGC	5 cut(s)	382, 401, 998, 1235, 1277
NaeI	GCCGGC	1 cut(s)	434
NcoI	CCATGG	2 cut(s)	198, 1239
NdeI	CATATG	1 cut(s)	406
NdeII	GATC	7 cut(s)	792, 802, 825, 910, 967, 1024, 1138
NgoMIV	GCCGGC	1 cut(s)	432
NlaIII	CATG	8 cut(s)	202, 314, 344, 491, 1227, 1243, 1262, 1362
NlaIV	GGNNCC	1 cut(s)	15
NsbI	TGCGCA	2 cut(s)	339, 492
NspI	RCATGY	1 cut(s)	344
PaeI	GCATGC	1 cut(s)	344
PagI	TCATGA	1 cut(s)	1358
PaqCI	CACCTGC	1 cut(s)	863
PctI	GAATGC	1 cut(s)	1297
PdiI	GCCGGC	1 cut(s)	434
PfeI	GAWTC	2 cut(s)	565, 584
PflMI	CCANNNNNTGG	1 cut(s)	1224
PfoI	TCCNGGA	1 cut(s)	783
PinAI	ACCGGT	1 cut(s)	1019
PkrI	GCNGC	9 cut(s)	46, 49, 85, 127, 290, 613, 838, 1060, 1273
PleI	GAGTC	3 cut(s)	110, 199, 1190
PmaCI	CACGTG	1 cut(s)	99
PmlI	CACGTG	1 cut(s)	99
PpsI	GAGTC	3 cut(s)	110, 199, 1190
Ppu21I	YACGTR	1 cut(s)	99
PsiI	TTATAA	1 cut(s)	1184
Psp124BI	GAGCTC	1 cut(s)	1074
Psp6I	CCWGG	2 cut(s)	238, 783
PspCI	CACGTG	1 cut(s)	99
PspFI	CCCAGC	3 cut(s)	376, 878, 1229
PspGI	CCWGG	2 cut(s)	238, 783
PspN4I	GGNNCC	1 cut(s)	15
PspPI	GGNCC	3 cut(s)	171, 209, 435
PsrI	GAACNNNNNNTAC	2 cut(s)	844, 876
PstI	CTGCAG	2 cut(s)	663, 910
PstNI	CAGNNNCTG	2 cut(s)	376, 878
PsuI	RGATCY	2 cut(s)	967, 1138
SacI	GAGCTC	1 cut(s)	1074
SalI	GTCGAC	1 cut(s)	62
SaqAI	TTAA	2 cut(s)	645, 1331
SatI	GCNGC	9 cut(s)	45, 48, 84, 126, 289, 612, 837, 1059, 1272
Sau3AI	GATC	7 cut(s)	792, 802, 825, 910, 967, 1024, 1138
Sau96I	GGNCC	3 cut(s)	171, 209, 435
SchI	GAGTC	3 cut(s)	110, 200, 1190
ScrFI	CCNGG	2 cut(s)	240, 785
SduI	GDGCHC	1 cut(s)	1074
SfaNI	GCATC	5 cut(s)	315, 579, 962, 1111, 1141
SfcI	CTRYAG	2 cut(s)	659, 906
SinI	GGWCC	2 cut(s)	171, 209
SmlI	CTYRAG	1 cut(s)	557
SmoI	CTYRAG	1 cut(s)	557
SphI	GCATGC	1 cut(s)	344
Sse9I	AATT	9 cut(s)	155, 178, 480, 757, 788, 829, 1064, 1075, 1104
SsiI	CCGC	7 cut(s)	45, 48, 84, 126, 614, 819, 1058
SspMI	CTAG	2 cut(s)	23, 506
SstI	GAGCTC	1 cut(s)	1074
StyD4I	CCNGG	2 cut(s)	238, 783
StyI	CCWWGG	5 cut(s)	39, 198, 730, 1116, 1239
TaaI	ACNGT	2 cut(s)	768, 1328
TaiI	ACGT	2 cut(s)	63, 101
TaqI	TCGA	3 cut(s)	63, 572, 587
TaqII	GACCGA	1 cut(s)	92
TasI	AATT	9 cut(s)	155, 178, 480, 757, 788, 829, 1064, 1075, 1104
TauI	GCSGC	5 cut(s)	47, 50, 86, 128, 1061
TfiI	GAWTC	2 cut(s)	565, 584
Tru1I	TTAA	2 cut(s)	645, 1331
Tru9I	TTAA	2 cut(s)	645, 1331
TscAI	CASTG	3 cut(s)	477, 500, 1288
TseI	GCWGC	4 cut(s)	288, 611, 836, 1271
TspDTI	ATGAA	6 cut(s)	299, 340, 473, 549, 978, 1182
TspRI	CASTG	3 cut(s)	477, 500, 1288
Van91I	CCANNNNNTGG	1 cut(s)	1224
VpaK11BI	GGWCC	2 cut(s)	171, 209
XagI	CCTNNNNNAGG	2 cut(s)	975, 1301
XapI	RAATTY	3 cut(s)	178, 480, 757
XceI	RCATGY	1 cut(s)	344
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1045
XmiI	GTMKAC	2 cut(s)	63, 1085
XspI	CTAG	2 cut(s)	23, 506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.