Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0005455

Physical Location & Seq

Genomic Coordinates Reverse (-)

9007994 .. 9012150

Gene Structure 4157 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG121000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGTCGGGACAGGAACCCCAACTAGCTAACCACCACCACCCCAAGGCCGCCGCCAATCTCAACGTCGACCCACCGGAGACCGACGCCGCCGTCCCGTCCACGTGTCATCCCCCGAGGGACTCCGACACCGCCGATGGCGAAGCTAAAAGATTGACCAAATTGGGAAAAAGCCGGTCCAGAAATTTCAAGGTGGAGTCCCCCATGGATTATGGACCTGACCCAGACGGCTACTTGCCTGGTCAACCCGTCTCTTCTTCTTCTTCCTCCCGTGAAGAAAAAGTCAGCAGCCTCAAAACTGGTTTGGTTCATGTTGCGAGGAAGATGCCGAAAAATGCGCATGCCCATTTCATTCTGGGACTAATGTATCAGAGGCTGGGTCAGCCTTCAAAGGCTGTTTTGGCATATGAGAAGGCCGAAGAGATTTTGCGCCGGCCTGAGGTTGACATTGATAGGACAGAGTTGCTTTCACTGGTTCAAATTCATCATGCGCAGTGTATTATGCTAGAGAGTTCGGTGGATGGTAGTTCGGATAAAGAACTTGAACCTCAGGAGCTTGAGGAGATTCTCTCGAAACTAAAAGAATCGATGCAGTCAGATGTAAGACAGGCAGCGGTATGGAATACTCTCGGTTTGATACTGCTTAAAACTGACCGTCTGCAGAGTGCCATTTTGGTATTGTCATCTTTGTTAGCATTTGCCCCTACCAGCTATGATTGCCTTGCAAACCTTGGGATTGCTTACCTTCAAAGTGGAAATTTGGAACTGTCAGAAAAATGTTTCCAGGAATTGATCCTCAAAGATCAAAATCATCCCACCGCCTTGATCAATTATGCTGCCCTTCTTTTATGTAGATATGGTTCAGTTGTTGCAGGTGCTGGGGCAAATGCTGGTGGAGGTGCTTCTGCAGATCACATTTCTGCTATCAATGTTGCAAAGGAGTGTTTGTTAGCATCCTTGAATGAAGATCCTAAAGCAGGACATATCTGGGCTAATCTTGCAAATGCCTATTATATGACTGGTGATCATAGAAGTTCCAGCAAGTGCTTGGAGAAGGCGGCCAAATTAGAGCTCAATTGTATGTCTACACGATATGCTGTTGCAATACACCGAACCAAGGATGCAGAACGGCATCAAGATCCCCACGAACTTTACTGGGCAGGAAATGAAATGGCTTCAGTTATAAGAGATGGAGACTCTGTTTCCGTTGAACTTCCCATAGCATGGGCAGGGCTTGCCATGGTTCACAAAGCCCAACATGAGATTTCAGCAGCATTGGCCACTGAACAGAATGCCCTGACAGAGGTGGAAGAACACGCTGATTACAGTTTAAAACAGGTAATCACGAAAGAGCTATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000291 GO:0000785 GO:0000956 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034655 GO:0035327 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043928 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0055087 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_16 TPR_19 TPR_2 TPR_7 TPR_8

Protein Analysis

452

Amino Acids

49.25

Weight (kDa)

5.69

Isoelectric Point (pI)

51.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005455)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63200 AT5G63200
fragaria_vesca	FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030 FvH4_5g07030
malus_domestica	MD06G1160400.v1.1
prunus_persica	Prupe.5G160000_v2.0.a1
pyrus_communis	pycom06g14350
rosa_chinensis	RchiOBHm_Chr5g0027621 RchiOBHm_Chr5g0027631 RchiOBHm_Chr7g0191501
rosa_laevigata	RLG00000004443
rosa_multiflora	Rmu_co8226669.1_g000001 Rmu_sc0002661.1_g000013 Rmu_sc0010599.1_g000002
rosa_roxburghii	Rroxscaffold_157G00438440 Rroxscaffold_3G00263740
rosa_rugosa	Rorug05G0100300 Rorug06G0510500
rosa_samantha	Rh5CG212600 Rh5DG194500 Rh7AG118900 Rh7BG121000 Rh7CG123700 Rh7DG121800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1181
AarI	CACCTGC	1 cut(s)	860
AasI	GACNNNNNNGTC	1 cut(s)	89
Acc16I	TGCGCA	2 cut(s)	336, 489
Acc36I	ACCTGC	1 cut(s)	860
AccB7I	CCANNNNNTGG	1 cut(s)	1221
AccI	GTMKAC	2 cut(s)	66, 1082
AciI	CCGC	7 cut(s)	48, 51, 87, 129, 611, 816, 1055
AclWI	GGATC	3 cut(s)	784, 959, 1130
AcoI	YGGCCR	2 cut(s)	1056, 1275
AcsI	RAATTY	3 cut(s)	181, 477, 754
AcuI	CTGAAG	1 cut(s)	1158
AcvI	CACGTG	1 cut(s)	102
AcyI	GRCGYC	1 cut(s)	84
AfiI	CCNNNNNNNGG	6 cut(s)	43, 436, 974, 1114, 1221, 1300
AflIII	ACRYGT	1 cut(s)	101
AgsI	TTSAA	7 cut(s)	187, 387, 476, 542, 746, 958, 1208
AjnI	CCWGG	2 cut(s)	235, 780
AluBI	AGCT	6 cut(s)	26, 143, 553, 708, 1069, 1351
AluI	AGCT	6 cut(s)	26, 143, 553, 708, 1069, 1351
Alw21I	GWGCWC	1 cut(s)	1071
Alw26I	GTCTC	3 cut(s)	71, 253, 1185
AlwI	GGATC	3 cut(s)	784, 959, 1130
AlwNI	CAGNNNCTG	2 cut(s)	373, 875
Ama87I	CYCGRG	1 cut(s)	112
AoxI	GGCC	5 cut(s)	45, 411, 431, 1056, 1275
ApeKI	GCWGC	4 cut(s)	285, 608, 833, 1268
ApoI	RAATTY	3 cut(s)	181, 477, 754
AspLEI	GCGC	3 cut(s)	337, 429, 490
AspS9I	GGNCC	2 cut(s)	174, 212
AsuHPI	GGTGA	1 cut(s)	1031
AvaI	CYCGRG	1 cut(s)	112
AvaII	GGWCC	2 cut(s)	174, 212
AxyI	CCTNAGG	2 cut(s)	435, 546
BaeI	ACNNNNGTAYC	2 cut(s)	347, 380
BalI	TGGCCA	1 cut(s)	1277
BanII	GRGCYC	1 cut(s)	1071
BbrPI	CACGTG	1 cut(s)	102
Bbv12I	GWGCWC	1 cut(s)	1071
BbvI	GCAGC	4 cut(s)	297, 620, 820, 1280
BccI	CCATC	3 cut(s)	128, 512, 1181
BceAI	ACGGC	3 cut(s)	74, 241, 1142
BcgI	CGANNNNNNTGC	2 cut(s)	304, 338
BciT130I	CCWGG	2 cut(s)	237, 782
BclI	TGATCA	2 cut(s)	822, 1021
BcoDI	GTCTC	3 cut(s)	71, 253, 1185
BfaI	CTAG	2 cut(s)	23, 503
BfmI	CTRYAG	2 cut(s)	656, 903
BfuAI	ACCTGC	1 cut(s)	860
BisI	GCNGC	8 cut(s)	48, 51, 87, 286, 609, 834, 1056, 1269
BlsI	GCNGC	8 cut(s)	49, 52, 88, 287, 610, 835, 1057, 1270
Bme1390I	CCNGG	2 cut(s)	237, 782
Bme18I	GGWCC	2 cut(s)	174, 212
BmeT110I	CYCGRG	1 cut(s)	112
BmgT120I	GGNCC	2 cut(s)	174, 212
BmiI	GGNNCC	1 cut(s)	15
BmrFI	CCNGG	2 cut(s)	237, 782
BmrI	ACTGGG	1 cut(s)	1162
BmsI	GCATC	5 cut(s)	312, 576, 959, 1108, 1138
BmuI	ACTGGG	1 cut(s)	1162
BplI	GAGNNNNNCTC	2 cut(s)	551, 583
BpuEI	CTTGAG	1 cut(s)	575
Bsa29I	ATCGAT	1 cut(s)	584
BsaAI	YACGTR	1 cut(s)	102
BsaBI	GATNNNNATC	1 cut(s)	804
BsaHI	GRCGYC	1 cut(s)	84
BsaI	GGTCTC	1 cut(s)	71
BsaJI	CCNNGG	6 cut(s)	42, 113, 201, 727, 1113, 1236
BsaWI	WCCGGW	1 cut(s)	73
BsaXI	ACNNNNNCTCC	4 cut(s)	929, 959, 1182, 1212
Bsc4I	CCNNNNNNNGG	6 cut(s)	43, 436, 974, 1114, 1221, 1300
Bse118I	RCCGGY	2 cut(s)	171, 429
Bse1I	ACTGG	4 cut(s)	301, 474, 1021, 1157
Bse21I	CCTNAGG	2 cut(s)	435, 546
Bse8I	GATNNNNATC	1 cut(s)	804
BseBI	CCWGG	2 cut(s)	237, 782
BseCI	ATCGAT	1 cut(s)	584
BseDI	CCNNGG	6 cut(s)	42, 113, 201, 727, 1113, 1236
BseGI	GGATG	5 cut(s)	106, 523, 808, 950, 1123
BseJI	GATNNNNATC	1 cut(s)	804
BseLI	CCNNNNNNNGG	6 cut(s)	43, 436, 974, 1114, 1221, 1300
BseMII	CTCAG	2 cut(s)	426, 560
BseNI	ACTGG	4 cut(s)	301, 474, 1021, 1157
BseRI	GAGGAG	1 cut(s)	572
BseXI	GCAGC	4 cut(s)	297, 620, 820, 1280
BseYI	CCCAGC	2 cut(s)	373, 875
BshFI	GGCC	5 cut(s)	47, 413, 433, 1058, 1277
BshVI	ATCGAT	1 cut(s)	584
BsiHKAI	GWGCWC	1 cut(s)	1071
BsiHKCI	CYCGRG	1 cut(s)	112
BsiSI	CCGG	3 cut(s)	74, 172, 430
BslFI	GGGAC	5 cut(s)	21, 77, 131, 181, 369
BslI	CCNNNNNNNGG	6 cut(s)	43, 436, 974, 1114, 1221, 1300
BsmAI	GTCTC	3 cut(s)	71, 253, 1185
BsmBI	CGTCTC	1 cut(s)	253
BsmFI	GGGAC	5 cut(s)	21, 77, 131, 181, 369
BsmI	GAATGC	1 cut(s)	1294
BsnI	GGCC	5 cut(s)	47, 413, 433, 1058, 1277
Bso31I	GGTCTC	1 cut(s)	71
BsoBI	CYCGRG	1 cut(s)	112
Bsp1286I	GDGCHC	1 cut(s)	1071
Bsp143I	GATC	7 cut(s)	789, 799, 822, 907, 964, 1021, 1135
Bsp19I	CCATGG	2 cut(s)	201, 1236
BspACI	CCGC	7 cut(s)	48, 51, 87, 129, 611, 816, 1055
BspANI	GGCC	5 cut(s)	47, 413, 433, 1058, 1277
BspCNI	CTCAG	2 cut(s)	427, 559
BspDI	ATCGAT	1 cut(s)	584
BspHI	TCATGA	1 cut(s)	1355
BspLI	GGNNCC	1 cut(s)	15
BspMAI	CTGCAG	2 cut(s)	660, 907
BspMI	ACCTGC	1 cut(s)	860
BspPI	GGATC	3 cut(s)	784, 959, 1130
BspTNI	GGTCTC	1 cut(s)	71
BsrFI	RCCGGY	2 cut(s)	171, 429
BsrI	ACTGG	4 cut(s)	301, 474, 1021, 1157
BssAI	RCCGGY	2 cut(s)	171, 429
BssECI	CCNNGG	6 cut(s)	42, 113, 201, 727, 1113, 1236
BssMI	GATC	7 cut(s)	789, 799, 822, 907, 964, 1021, 1135
BssNI	GRCGYC	1 cut(s)	84
BssT1I	CCWWGG	5 cut(s)	42, 201, 727, 1113, 1236
Bst2UI	CCWGG	2 cut(s)	237, 782
Bst4CI	ACNGT	3 cut(s)	653, 765, 1325
Bst6I	CTCTTC	2 cut(s)	256, 411
BstACI	GRCGYC	1 cut(s)	84
BstAPI	GCANNNNNTGC	1 cut(s)	1232
BstBAI	YACGTR	1 cut(s)	102
BstC8I	GCNNGC	3 cut(s)	339, 431, 1233
BstDEI	CTNAG	2 cut(s)	435, 546
BstDSI	CCRYGG	2 cut(s)	201, 1236
BstENI	CCTNNNNNAGG	2 cut(s)	972, 1298
BstF5I	GGATG	5 cut(s)	106, 523, 808, 950, 1123
BstHHI	GCGC	3 cut(s)	337, 429, 490
BstKTI	GATC	7 cut(s)	792, 802, 825, 910, 967, 1024, 1138
BstMAI	GTCTC	3 cut(s)	71, 253, 1185
BstMBI	GATC	7 cut(s)	789, 799, 822, 907, 964, 1021, 1135
BstMWI	GCNNNNNNNGC	6 cut(s)	379, 398, 714, 995, 1232, 1274
BstNI	CCWGG	2 cut(s)	237, 782
BstNSI	RCATGY	1 cut(s)	341
BstSCI	CCNGG	2 cut(s)	235, 780
BstSFI	CTRYAG	2 cut(s)	656, 903
BstV1I	GCAGC	4 cut(s)	297, 620, 820, 1280
BstX2I	RGATCY	2 cut(s)	964, 1135
BstYI	RGATCY	2 cut(s)	964, 1135
Bsu15I	ATCGAT	1 cut(s)	584
Bsu36I	CCTNAGG	2 cut(s)	435, 546
BsuRI	GGCC	5 cut(s)	47, 413, 433, 1058, 1277
BsuTUI	ATCGAT	1 cut(s)	584
BtgI	CCRYGG	2 cut(s)	201, 1236
BtsCI	GGATG	5 cut(s)	106, 523, 808, 950, 1123
BtsI	GCAGTG	1 cut(s)	497
BtsIMutI	CAGTG	3 cut(s)	467, 497, 1278
BveI	ACCTGC	1 cut(s)	860
Cac8I	GCNNGC	3 cut(s)	339, 431, 1233
CaiI	CAGNNNCTG	2 cut(s)	373, 875
CciI	TCATGA	1 cut(s)	1355
CfoI	GCGC	3 cut(s)	337, 429, 490
Cfr10I	RCCGGY	2 cut(s)	171, 429
Cfr13I	GGNCC	2 cut(s)	174, 212
ClaI	ATCGAT	1 cut(s)	584
CseI	GACGC	1 cut(s)	92
CviAII	CATG	8 cut(s)	202, 308, 338, 485, 1221, 1237, 1256, 1356
DdeI	CTNAG	2 cut(s)	435, 546
DpnI	GATC	7 cut(s)	791, 801, 824, 909, 966, 1023, 1137
DpnII	GATC	7 cut(s)	789, 799, 822, 907, 964, 1021, 1135
DraI	TTTAAA	1 cut(s)	1329
DrdI	GACNNNNNNGTC	1 cut(s)	89
DseDI	GACNNNNNNGTC	1 cut(s)	89
EaeI	YGGCCR	2 cut(s)	1056, 1275
Eam1104I	CTCTTC	2 cut(s)	256, 411
EarI	CTCTTC	2 cut(s)	256, 411
Ecl136II	GAGCTC	1 cut(s)	1069
Eco130I	CCWWGG	5 cut(s)	42, 201, 727, 1113, 1236
Eco24I	GRGCYC	1 cut(s)	1071
Eco31I	GGTCTC	1 cut(s)	71
Eco47I	GGWCC	2 cut(s)	174, 212
Eco53kI	GAGCTC	1 cut(s)	1069
Eco57I	CTGAAG	1 cut(s)	1158
Eco72I	CACGTG	1 cut(s)	102
Eco81I	CCTNAGG	2 cut(s)	435, 546
Eco88I	CYCGRG	1 cut(s)	112
EcoICRI	GAGCTC	1 cut(s)	1069
EcoNI	CCTNNNNNAGG	2 cut(s)	972, 1298
EcoRII	CCWGG	2 cut(s)	235, 780
EcoT14I	CCWWGG	5 cut(s)	42, 201, 727, 1113, 1236
EcoT38I	GRGCYC	1 cut(s)	1071
ErhI	CCWWGG	5 cut(s)	42, 201, 727, 1113, 1236
Esp3I	CGTCTC	1 cut(s)	253
FaeI	CATG	8 cut(s)	205, 311, 341, 488, 1224, 1240, 1259, 1359
FaqI	GGGAC	5 cut(s)	21, 77, 131, 181, 369
FatI	CATG	8 cut(s)	201, 307, 337, 484, 1220, 1236, 1255, 1355
FauNDI	CATATG	1 cut(s)	403
FbaI	TGATCA	2 cut(s)	822, 1021
FblI	GTMKAC	2 cut(s)	66, 1082
Fnu4HI	GCNGC	8 cut(s)	48, 51, 87, 286, 609, 834, 1056, 1269
FokI	GGATG	5 cut(s)	93, 530, 795, 937, 1130
FriOI	GRGCYC	1 cut(s)	1071
Fsp4HI	GCNGC	8 cut(s)	48, 51, 87, 286, 609, 834, 1056, 1269
FspAI	RTGCGCAY	1 cut(s)	336
FspBI	CTAG	2 cut(s)	23, 503
FspI	TGCGCA	2 cut(s)	336, 489
GlaI	GCGC	3 cut(s)	336, 428, 489
GluI	GCNGC	8 cut(s)	48, 51, 87, 286, 609, 834, 1056, 1269
GsaI	CCCAGC	2 cut(s)	377, 879
HaeIII	GGCC	5 cut(s)	47, 413, 433, 1058, 1277
HapII	CCGG	3 cut(s)	74, 172, 430
HgaI	GACGC	1 cut(s)	92
HhaI	GCGC	3 cut(s)	337, 429, 490
Hin1I	GRCGYC	1 cut(s)	84
Hin1II	CATG	8 cut(s)	205, 311, 341, 488, 1224, 1240, 1259, 1359
Hin6I	GCGC	3 cut(s)	335, 427, 488
HinP1I	GCGC	3 cut(s)	335, 427, 488
HincII	GTYRAC	3 cut(s)	67, 242, 442
HindII	GTYRAC	3 cut(s)	67, 242, 442
HinfI	GANTC	5 cut(s)	119, 194, 562, 581, 1193
HpaII	CCGG	3 cut(s)	74, 172, 430
HphI	GGTGA	1 cut(s)	1031
Hpy166II	GTNNAC	6 cut(s)	67, 99, 242, 442, 1083, 1243
Hpy188I	TCNGA	5 cut(s)	124, 369, 529, 595, 769
Hpy188III	TCNNGA	7 cut(s)	6, 177, 548, 568, 1133, 1342, 1356
Hpy8I	GTNNAC	6 cut(s)	67, 99, 242, 442, 1083, 1243
Hpy99I	CGWCG	2 cut(s)	68, 86
HpyAV	CCTTC	5 cut(s)	393, 403, 752, 848, 1045
HpyCH4III	ACNGT	3 cut(s)	653, 765, 1325
HpyCH4IV	ACGT	2 cut(s)	63, 101
HpyCH4V	TGCA	9 cut(s)	589, 658, 722, 869, 905, 932, 998, 1100, 1121
HpyF10VI	GCNNNNNNNGC	6 cut(s)	379, 398, 714, 995, 1232, 1274
HpyF3I	CTNAG	2 cut(s)	435, 546
HpySE526I	ACGT	2 cut(s)	63, 101
Hsp92I	GRCGYC	1 cut(s)	84
Hsp92II	CATG	8 cut(s)	205, 311, 341, 488, 1224, 1240, 1259, 1359
HspAI	GCGC	3 cut(s)	335, 427, 488
KroI	GCCGGC	1 cut(s)	429
KroNI	GCCGGC	1 cut(s)	431
Ksp22I	TGATCA	2 cut(s)	822, 1021
Kzo9I	GATC	7 cut(s)	789, 799, 822, 907, 964, 1021, 1135
LmnI	GCTCC	1 cut(s)	550
Lsp1109I	GCAGC	4 cut(s)	297, 620, 820, 1280
LweI	GCATC	5 cut(s)	312, 576, 959, 1108, 1138
MaeI	CTAG	2 cut(s)	23, 503
MaeII	ACGT	2 cut(s)	63, 101
MalI	GATC	7 cut(s)	791, 801, 824, 909, 966, 1023, 1137
MboI	GATC	7 cut(s)	789, 799, 822, 907, 964, 1021, 1135
MboII	GAAGA	9 cut(s)	243, 246, 249, 252, 284, 331, 428, 974, 1319
MfeI	CAATTG	1 cut(s)	1072
MflI	RGATCY	2 cut(s)	964, 1135
MhlI	GDGCHC	1 cut(s)	1071
MlsI	TGGCCA	1 cut(s)	1277
MluCI	AATT	8 cut(s)	158, 181, 477, 754, 785, 826, 1061, 1072
MluNI	TGGCCA	1 cut(s)	1277
MlyI	GAGTC	3 cut(s)	113, 203, 1187
MmeI	TCCRAC	1 cut(s)	147
Mox20I	TGGCCA	1 cut(s)	1277
MroNI	GCCGGC	1 cut(s)	429
MscI	TGGCCA	1 cut(s)	1277
MseI	TTAA	2 cut(s)	642, 1328
Msp20I	TGGCCA	1 cut(s)	1277
MspA1I	CMGCKG	1 cut(s)	611
MspI	CCGG	3 cut(s)	74, 172, 430
MspR9I	CCNGG	2 cut(s)	237, 782
MunI	CAATTG	1 cut(s)	1072
Mva1269I	GAATGC	1 cut(s)	1294
MvaI	CCWGG	2 cut(s)	237, 782
MwoI	GCNNNNNNNGC	6 cut(s)	379, 398, 714, 995, 1232, 1274
NaeI	GCCGGC	1 cut(s)	431
NcoI	CCATGG	2 cut(s)	201, 1236
NdeI	CATATG	1 cut(s)	403
NdeII	GATC	7 cut(s)	789, 799, 822, 907, 964, 1021, 1135
NgoMIV	GCCGGC	1 cut(s)	429
NlaIII	CATG	8 cut(s)	205, 311, 341, 488, 1224, 1240, 1259, 1359
NlaIV	GGNNCC	1 cut(s)	15
NsbI	TGCGCA	2 cut(s)	336, 489
NspI	RCATGY	1 cut(s)	341
PaeI	GCATGC	1 cut(s)	341
PagI	TCATGA	1 cut(s)	1355
PaqCI	CACCTGC	1 cut(s)	860
PctI	GAATGC	1 cut(s)	1294
PdiI	GCCGGC	1 cut(s)	431
PfeI	GAWTC	2 cut(s)	562, 581
PflMI	CCANNNNNTGG	1 cut(s)	1221
PfoI	TCCNGGA	1 cut(s)	780
PkrI	GCNGC	8 cut(s)	49, 52, 88, 287, 610, 835, 1057, 1270
PleI	GAGTC	3 cut(s)	113, 202, 1187
PmaCI	CACGTG	1 cut(s)	102
PmlI	CACGTG	1 cut(s)	102
PpsI	GAGTC	3 cut(s)	113, 202, 1187
Ppu21I	YACGTR	1 cut(s)	102
PsiI	TTATAA	1 cut(s)	1181
Psp124BI	GAGCTC	1 cut(s)	1071
Psp6I	CCWGG	2 cut(s)	235, 780
PspCI	CACGTG	1 cut(s)	102
PspFI	CCCAGC	2 cut(s)	373, 875
PspGI	CCWGG	2 cut(s)	235, 780
PspN4I	GGNNCC	1 cut(s)	15
PspPI	GGNCC	2 cut(s)	174, 212
PsrI	GAACNNNNNNTAC	2 cut(s)	841, 873
PstI	CTGCAG	2 cut(s)	660, 907
PstNI	CAGNNNCTG	2 cut(s)	373, 875
PsuI	RGATCY	2 cut(s)	964, 1135
SacI	GAGCTC	1 cut(s)	1071
SalI	GTCGAC	1 cut(s)	65
SaqAI	TTAA	2 cut(s)	642, 1328
SatI	GCNGC	8 cut(s)	48, 51, 87, 286, 609, 834, 1056, 1269
Sau3AI	GATC	7 cut(s)	789, 799, 822, 907, 964, 1021, 1135
Sau96I	GGNCC	2 cut(s)	174, 212
SchI	GAGTC	3 cut(s)	113, 203, 1187
ScrFI	CCNGG	2 cut(s)	237, 782
SduI	GDGCHC	1 cut(s)	1071
SfaNI	GCATC	5 cut(s)	312, 576, 959, 1108, 1138
SfcI	CTRYAG	2 cut(s)	656, 903
SinI	GGWCC	2 cut(s)	174, 212
SmlI	CTYRAG	1 cut(s)	554
SmoI	CTYRAG	1 cut(s)	554
SphI	GCATGC	1 cut(s)	341
Sse9I	AATT	8 cut(s)	158, 181, 477, 754, 785, 826, 1061, 1072
SsiI	CCGC	7 cut(s)	48, 51, 87, 129, 611, 816, 1055
SspMI	CTAG	2 cut(s)	23, 503
SstI	GAGCTC	1 cut(s)	1071
StyD4I	CCNGG	2 cut(s)	235, 780
StyI	CCWWGG	5 cut(s)	42, 201, 727, 1113, 1236
TaaI	ACNGT	3 cut(s)	653, 765, 1325
TaiI	ACGT	2 cut(s)	66, 104
TaqI	TCGA	3 cut(s)	66, 569, 584
TaqII	GACCGA	1 cut(s)	95
TasI	AATT	8 cut(s)	158, 181, 477, 754, 785, 826, 1061, 1072
TauI	GCSGC	4 cut(s)	50, 53, 89, 1058
TfiI	GAWTC	2 cut(s)	562, 581
Tru1I	TTAA	2 cut(s)	642, 1328
Tru9I	TTAA	2 cut(s)	642, 1328
TscAI	CASTG	3 cut(s)	474, 497, 1285
TseI	GCWGC	4 cut(s)	285, 608, 833, 1268
TspDTI	ATGAA	5 cut(s)	296, 337, 470, 975, 1179
TspGWI	ACGGA	1 cut(s)	1192
TspRI	CASTG	3 cut(s)	474, 497, 1285
Van91I	CCANNNNNTGG	1 cut(s)	1221
VpaK11BI	GGWCC	2 cut(s)	174, 212
XagI	CCTNNNNNAGG	2 cut(s)	972, 1298
XapI	RAATTY	3 cut(s)	181, 477, 754
XceI	RCATGY	1 cut(s)	341
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1042
XmiI	GTMKAC	2 cut(s)	66, 1082
XspI	CTAG	2 cut(s)	23, 503

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.