Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0002290

Physical Location & Seq

Genomic Coordinates Forward (+)

6532781 .. 6537510

Gene Structure 4730 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g11510.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2619 bp

ATGGCGATGGAAATTACTCAGTTTCTTTTAAATGCCCAAGCTGTGGATGGAAATGTGCGTAAGCATGCTGAAGAAAACATAAGACAATTCCAAGAGCAAAATCTTCCGGGTTTCCTGTTCTCTCTTGCTGCGGAATTAGCTAATGATGATAAGCCTGTGGAGAGTCGAAAGTTAGCAGGTTTAATTCTAAAGAATGCATTGGATGCCAAAGAACAGCATAGAAAGTTTGAACTTGCACAAAGATGGATTGCTCTGGACCCAAATGCAAAGGCCCAAATTAGAGCGTGCCTGTTGAAGACATTATCATCTCCTGCACATGATGCTCGATCAACTGCATCTCAAGTCATTGCAAAGCTTGCAGGCATCGAGTTGCCAATCAAACAGTGGCCTGAACTGATTGAAGCTTTGCTATCAAACAATAATCAGCTTCCGGCTCACACTAGACAGGCAACTCTTGAAACTCTTGGATACATATGCGAGGAGGTCTCCCCAGAAGTGGTAGAGCAAGATCATGTCAACAAAATACTTACAGCTGTTGTTCAGGGCATGAACTCTTCTGAGAGTAATAATGATGTTAGGCTTGCTGCCACACGAGCTCTTTATAATGCTTTGAGTTTTGCCCAGGCGAATTTCTCCAATGATACAGAACGTGATTACATAATGAGAGTTGTGTGCGAGGCTACTCTTTCCCCTGAGGTAAAGATTCGACAAGCAGCATTTGAATGTTTGGTGTCTATATCTTCGACATACTATGAGAAATTGTCTCCATACATCCAAGATATTTTCACCATAACTGCAAAGGCTGTGAAGGAAGATGAAGAACCTGTTGCACTTCAAGCCATTGAGTTTTGGAGTTCTATTTGTGATGAGGAGATTGACATTCTAGAAGAATATGGGGGTGATTTTACTGGGGATTCTGTTATTCCTTGCTTCTATTTTATTAAGCAAGCACTTCCTGCTCTCATCCCCTTGTTATTGGAGACACTTCTAAAGCAGGAAGAGGATCAAGATCAGGATGAAGGGGCCTGGAATATTGCCATGGCTGGTGGCACTTGCTTGGGCTTGGTAGCACGAACAGTTGGTGATGATGTTGTGCCGCTTGTAATGCCTTTTATTGAGGAGAATATTTCAAAACCAGATTGGAGGCAGAGGGAGGCAGCCACCTATGCTTTTGGTTCAGTTTTGGAAGGCCCATCCCCTGAGAAGCTAATGACTCTTGTTAATCATGCTTTGAATTTTATGCTAAATGCCCTGATGAAAGACCCAAACAACCATGTGAAGGACACTACTGGTTGGACTCTTGGAAGGATATTTGAGTTTCTACATGGGTCAGCTTATGACACACCCATAATCACCCAAGCGAATTGTCAACAGATTATCACAGTTCTTCTTCAGAGCATGAAAGATGTGCCAAATGTTGCTGAGAAAGCCTGTGGAGCTTTATATTTCTTGGCGCAGGGTTTCGAGGATTCAGGGTCTTCATCCACCCAGCTGACTCCCTTTTTCCAGGATATCATCCAAGCTCTTCTTGATGTGACTCATCGAGAAGATGCTGGAGAATCCCGCCTTCGGACCGCAGCTTACGAGAGTTTGAATGAAGTTGTGAGGTGCTGCACCGATGAGACTGCTCCAATGGTGATGCAATTAGTTCCTATTATTATGAATGAACTCCACCAGACTCTCGAGGCACAGAGGCTTTCATCTGATGAAAGAGACAAGCAGAATGAACTACAAGGCCTTCTTTGTGGTTGCTTGCAGGTCATCATACAGAAGCTAGGGTCATCTGAACCAACTAAATATGTGTTCATGCAGTATGCTGACCAGATGATGCAACTCTTCTTGAGAGTATTTTCTTGTAAAAGTGCCACAGCGCATGAGGAGGCTATGCTTGCCATCGGAGCTCTTGCCTATTCAACTGGGTCTGATTTTGCAAAATACATGTCTGAATTCTACAAATATTTAGAAATGGGCCTCCAAAACTTTGAGGACTATCAGGTCTGCGCTATAACAGTTGGTGTGGTGGGGGATATATCTAGGGCTTTGGAAGATAAAATATTGCCTTATTGTGATGGGATAATGACCCAGCTCCTCAAGAATTTATCGAGCAACCAGTTGCACCGGTCTGTGAAGCCTCCAATATTTTCATGCTTTGGTGACCTAGCCTTAGCTATTGGGGAGAATTTCGACAAGTATTTGATGTATGCCATGCCCATGCTTCAGAGTGCGGCAGAACTATCAGTCCAGACATCAGGTGCTGATGATGATATAATAGAGTACACAAATACTTTGAGGAATGGAATTTTGGAGGCATACTCTGGTATCTTACAAGGATTTAAGGGCTCTGCCAAGAGCCAATTGTTGATGCCTCATGCACCTCATATTCTCCAGTTCTTGGATAGTTTATACATGGCCAAGGACATGGATGATGTGGTCATGAAGACTGCCATTGGGGTACTTGGAGATCTAGCTGATACATTGGGTGGTAATGCAGCTCCTTTGATTCAGCAATGTGTATCAAGCAGAGGCTTTCTTAATGAATGTCTCCAGTCAGAGGATAATCTGGTCAGGGAAGCAGGGGAATGGGCACAGTTGGCCATCCGTCGGGCAATATCTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000060 GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000819 GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0006606 GO:0006607 GO:0006610 GO:0006810 GO:0006886 GO:0006913 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0007079 GO:0007080 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0008092 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009987 GO:0010494 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019894 GO:0019899 GO:0019904 GO:0022402 GO:0022607 GO:0023052 GO:0030953 GO:0031072 GO:0031090 GO:0031122 GO:0031291 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0032991 GO:0033036 GO:0033218 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0035556 GO:0035770 GO:0036464 GO:0040001 GO:0042277 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0046907 GO:0048285 GO:0050000 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051170 GO:0051179 GO:0051225 GO:0051234 GO:0051276 GO:0051293 GO:0051303 GO:0051305 GO:0051310 GO:0051640 GO:0051641 GO:0051649 GO:0051653 GO:0051656 GO:0051716 GO:0051879 GO:0065007 GO:0070013 GO:0070727 GO:0070925 GO:0071702 GO:0071705 GO:0071782 GO:0071840 GO:0072594 GO:0090307 GO:0097435 GO:0098813 GO:0098827 GO:0140014 GO:1902850 GO:1903047 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

HEAT HEAT_EZ IBN_N

Protein Analysis

873

Amino Acids

96.74

Weight (kDa)

4.65

Isoelectric Point (pI)

48.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBN_N	PF03810	23 - 102	1.6e-12	Importin-beta N-terminal domain
HEAT_EZ	PF13513	381 - 437	8.9e-10	HEAT-like repeat
TPR_IMB1	PF25574	459 - 830	1.6e-111	Importin subunit beta-1-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002290)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53480
fragaria_vesca	FvH4_5g11510 FvH4_5g11510 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050
malus_domestica	MD01G1223400.v1.1 MD06G1112600.v1.1 MD07G1294100.v1.1 MD14G1134000.v1.1
prunus_persica	Prupe.2G313900_v2.0.a1 Prupe.5G125800_v2.0.a1
pyrus_communis	pycom01g23260 pycom06g10550 pycom07g26690
rosa_chinensis	RchiOBHm_Chr1g0381661 RchiOBHm_Chr7g0186291
rosa_laevigata	RLG00000004852 RLG00000026217
rosa_multiflora	Rmu_sc0000645.1_g000053 Rmu_sc0012555.1_g000004
rosa_roxburghii	Rroxscaffold_3G00268280
rosa_rugosa	Rorug01G0430300 Rorug01G0430300 Rorug01G0430300 Rorug01G0430300 Rorug01G0430300 Rorug06G0473100 Rorug06G0473100
rosa_samantha	Rh1AG453500 Rh1BG410700 Rh1CG425100 Rh1DG442400 Rh7AG068000 Rh7CG080000 Rh7DG080600
rosa_wichuraiana	Rw1G039560 Rw7G006700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	603
AasI	GACNNNNNNGTC	1 cut(s)	1994
Acc36I	ACCTGC	2 cut(s)	167, 1747
AccB7I	CCANNNNNTGG	2 cut(s)	43, 2392
AciI	CCGC	5 cut(s)	131, 1097, 1564, 1575, 2225
AclWI	GGATC	1 cut(s)	1011
AcoI	YGGCCR	2 cut(s)	2409, 2592
AcsI	RAATTY	6 cut(s)	628, 1234, 1946, 2095, 2179, 2298
AcuI	CTGAAG	3 cut(s)	90, 1376, 2201
AfaI	GTAC	2 cut(s)	2276, 2454
AfiI	CCNNNNNNNGG	7 cut(s)	43, 496, 1279, 1569, 2392, 2551, 2601
AflIII	ACRYGT	1 cut(s)	1938
AgeI	ACCGGT	1 cut(s)	2118
AjnI	CCWGG	3 cut(s)	621, 1025, 1506
AjuI	GAANNNNNNNTTGG	2 cut(s)	2285, 2317
AloI	GAACNNNNNNTCC	2 cut(s)	2223, 2255
Alw21I	GWGCWC	2 cut(s)	598, 1903
Alw26I	GTCTC	6 cut(s)	490, 768, 974, 1616, 1707, 2546
AlwI	GGATC	1 cut(s)	1011
AlwNI	CAGNNNCTG	1 cut(s)	2255
Ama87I	CYCGRG	1 cut(s)	1682
AoxI	GGCC	8 cut(s)	270, 386, 1023, 1189, 1735, 1969, 2409, 2592
ApeKI	GCWGC	7 cut(s)	128, 584, 713, 1157, 1577, 1611, 2489
ApoI	RAATTY	6 cut(s)	628, 1234, 1946, 2095, 2179, 2298
ArsI	GACNNNNNNTTYG	2 cut(s)	1925, 1957
AsiGI	ACCGGT	1 cut(s)	2118
AspLEI	GCGC	3 cut(s)	1456, 1873, 2003
AspS9I	GGNCC	6 cut(s)	256, 271, 1023, 1190, 1572, 1969
AsuC2I	CCSGG	1 cut(s)	108
AsuHPI	GGTGA	6 cut(s)	778, 911, 1094, 1345, 1648, 2165
AvaI	CYCGRG	1 cut(s)	1682
AvaII	GGWCC	2 cut(s)	256, 1572
AxyI	CCTNAGG	1 cut(s)	693
BaeGI	GKGCMC	1 cut(s)	2587
BaeI	ACNNNNGTAYC	2 cut(s)	2302, 2335
BalI	TGGCCA	2 cut(s)	2411, 2594
BanII	GRGCYC	3 cut(s)	598, 1903, 2342
BauI	CACGAG	1 cut(s)	591
BbsI	GAAGAC	3 cut(s)	302, 1470, 2444
Bbv12I	GWGCWC	2 cut(s)	598, 1903
BbvI	GCAGC	7 cut(s)	115, 571, 725, 1169, 1589, 1598, 2501
BccI	CCATC	6 cut(s)	41, 237, 1201, 1901, 2063, 2603
BcgI	CGANNNNNNTGC	2 cut(s)	1607, 1641
BciT130I	CCWGG	3 cut(s)	623, 1027, 1508
BciVI	GTATCC	1 cut(s)	461
BcnI	CCSGG	1 cut(s)	108
BcoDI	GTCTC	6 cut(s)	490, 768, 974, 1616, 1707, 2546
BfaI	CTAG	6 cut(s)	441, 884, 1775, 2034, 2159, 2465
BfuAI	ACCTGC	2 cut(s)	167, 1747
BfuI	GTATCC	1 cut(s)	461
BglII	AGATCT	1 cut(s)	2461
BisI	GCNGC	9 cut(s)	129, 585, 714, 1097, 1158, 1578, 1612, 2226, 2490
BlsI	GCNGC	9 cut(s)	130, 586, 715, 1098, 1159, 1579, 1613, 2227, 2491
Bme1390I	CCNGG	4 cut(s)	108, 623, 1027, 1508
Bme18I	GGWCC	2 cut(s)	256, 1572
BmeT110I	CYCGRG	1 cut(s)	1682
BmgT120I	GGNCC	6 cut(s)	256, 271, 1023, 1190, 1572, 1969
BmiI	GGNNCC	2 cut(s)	258, 1024
BmrFI	CCNGG	4 cut(s)	108, 623, 1027, 1508
BmrI	ACTGGG	2 cut(s)	918, 1926
BmsI	GCATC	8 cut(s)	193, 310, 344, 372, 1540, 1629, 1818, 2352
BmuI	ACTGGG	2 cut(s)	918, 1926
BpiI	GAAGAC	3 cut(s)	302, 1470, 2444
BplI	GAGNNNNNCTC	4 cut(s)	470, 502, 2297, 2329
BpmI	CTGGAG	3 cut(s)	1575, 2369, 2528
Bpu10I	CCTNAGC	1 cut(s)	2164
BpuEI	CTTGAG	3 cut(s)	324, 1861, 2075
BpuMI	CCSGG	1 cut(s)	108
BsaBI	GATNNNNATC	1 cut(s)	1008
BsaI	GGTCTC	1 cut(s)	490
BsaJI	CCNNGG	3 cut(s)	621, 1038, 2412
BsaWI	WCCGGW	1 cut(s)	2118
Bsc4I	CCNNNNNNNGG	7 cut(s)	43, 496, 1279, 1569, 2392, 2551, 2601
Bse118I	RCCGGY	1 cut(s)	2118
Bse1I	ACTGG	6 cut(s)	913, 1294, 1921, 2110, 2386, 2545
Bse21I	CCTNAGG	1 cut(s)	693
Bse3DI	GCAATG	2 cut(s)	345, 2513
Bse8I	GATNNNNATC	1 cut(s)	1008
BseBI	CCWGG	3 cut(s)	623, 1027, 1508
BseDI	CCNNGG	3 cut(s)	621, 1038, 2412
BseJI	GATNNNNATC	1 cut(s)	1008
BseLI	CCNNNNNNNGG	7 cut(s)	43, 496, 1279, 1569, 2392, 2551, 2601
BseMI	GCAATG	2 cut(s)	345, 2513
BseMII	CTCAG	5 cut(s)	32, 549, 684, 1191, 1413
BseNI	ACTGG	6 cut(s)	913, 1294, 1921, 2110, 2386, 2545
BseRI	GAGGAG	5 cut(s)	494, 884, 1133, 1892, 2078
BseSI	GKGCMC	1 cut(s)	2587
BseXI	GCAGC	7 cut(s)	115, 571, 725, 1169, 1589, 1598, 2501
BseYI	CCCAGC	2 cut(s)	1488, 2082
BsgI	GTGCAG	2 cut(s)	297, 1597
BshFI	GGCC	8 cut(s)	272, 388, 1025, 1191, 1737, 1971, 2411, 2594
BshTI	ACCGGT	1 cut(s)	2118
BsiHKAI	GWGCWC	2 cut(s)	598, 1903
BsiHKCI	CYCGRG	1 cut(s)	1682
BsiSI	CCGG	3 cut(s)	107, 431, 2119
BslI	CCNNNNNNNGG	7 cut(s)	43, 496, 1279, 1569, 2392, 2551, 2601
BsmAI	GTCTC	6 cut(s)	490, 768, 974, 1616, 1707, 2546
BsmI	GAATGC	1 cut(s)	199
BsnI	GGCC	8 cut(s)	272, 388, 1025, 1191, 1737, 1971, 2411, 2594
Bso31I	GGTCTC	1 cut(s)	490
BsoBI	CYCGRG	1 cut(s)	1682
Bsp1286I	GDGCHC	4 cut(s)	598, 1903, 2342, 2587
Bsp143I	GATC	5 cut(s)	326, 508, 1003, 1009, 2461
Bsp19I	CCATGG	1 cut(s)	1038
BspACI	CCGC	5 cut(s)	131, 1097, 1564, 1575, 2225
BspANI	GGCC	8 cut(s)	272, 388, 1025, 1191, 1737, 1971, 2411, 2594
BspCNI	CTCAG	5 cut(s)	31, 550, 685, 1192, 1414
BspHI	TCATGA	1 cut(s)	2433
BspLI	GGNNCC	2 cut(s)	258, 1024
BspMI	ACCTGC	2 cut(s)	167, 1747
BspPI	GGATC	1 cut(s)	1011
BspQI	GCTCTTC	1 cut(s)	1530
BspTNI	GGTCTC	1 cut(s)	490
BsrDI	GCAATG	2 cut(s)	345, 2513
BsrFI	RCCGGY	1 cut(s)	2118
BsrI	ACTGG	6 cut(s)	913, 1294, 1921, 2110, 2386, 2545
BssAI	RCCGGY	1 cut(s)	2118
BssECI	CCNNGG	3 cut(s)	621, 1038, 2412
BssMI	GATC	5 cut(s)	326, 508, 1003, 1009, 2461
BssSI	CACGAG	1 cut(s)	591
BssT1I	CCWWGG	2 cut(s)	1038, 2412
Bst2BI	CACGAG	1 cut(s)	591
Bst2UI	CCWGG	3 cut(s)	623, 1027, 1508
Bst4CI	ACNGT	5 cut(s)	384, 1078, 1384, 2011, 2589
Bst6I	CTCTTC	4 cut(s)	559, 993, 1530, 1841
BstAPI	GCANNNNNTGC	4 cut(s)	203, 320, 356, 956
BstC8I	GCNNGC	8 cut(s)	66, 286, 357, 361, 582, 948, 1754, 1890
BstDEI	CTNAG	6 cut(s)	18, 558, 693, 1200, 1422, 2164
BstDSI	CCRYGG	1 cut(s)	1038
BstEII	GGTNACC	1 cut(s)	2153
BstHHI	GCGC	3 cut(s)	1456, 1873, 2003
BstKTI	GATC	5 cut(s)	329, 511, 1006, 1012, 2464
BstMAI	GTCTC	6 cut(s)	490, 768, 974, 1616, 1707, 2546
BstMBI	GATC	5 cut(s)	326, 508, 1003, 1009, 2461
BstNI	CCWGG	3 cut(s)	623, 1027, 1508
BstNSI	RCATGY	2 cut(s)	68, 1942
BstPI	GGTNACC	1 cut(s)	2153
BstSCI	CCNGG	4 cut(s)	106, 621, 1025, 1506
BstSLI	GKGCMC	1 cut(s)	2587
BstV1I	GCAGC	7 cut(s)	115, 571, 725, 1169, 1589, 1598, 2501
BstV2I	GAAGAC	3 cut(s)	302, 1470, 2444
BstX2I	RGATCY	1 cut(s)	2461
BstXI	CCANNNNNNTGG	1 cut(s)	2419
BstYI	RGATCY	1 cut(s)	2461
Bsu36I	CCTNAGG	1 cut(s)	693
BsuI	GTATCC	1 cut(s)	461
BsuRI	GGCC	8 cut(s)	272, 388, 1025, 1191, 1737, 1971, 2411, 2594
BtgI	CCRYGG	1 cut(s)	1038
BtgZI	GCGATG	1 cut(s)	20
BtsIMutI	CAGTG	1 cut(s)	389
BveI	ACCTGC	2 cut(s)	167, 1747
Cac8I	GCNNGC	8 cut(s)	66, 286, 357, 361, 582, 948, 1754, 1890
CaiI	CAGNNNCTG	1 cut(s)	2255
CciI	TCATGA	1 cut(s)	2433
CfoI	GCGC	3 cut(s)	1456, 1873, 2003
Cfr10I	RCCGGY	1 cut(s)	2118
Cfr13I	GGNCC	6 cut(s)	256, 271, 1023, 1190, 1572, 1969
CpoI	CGGWCCG	1 cut(s)	1572
Csp6I	GTAC	2 cut(s)	2275, 2453
CspAI	ACCGGT	1 cut(s)	2118
CspI	CGGWCCG	1 cut(s)	1572
CviQI	GTAC	2 cut(s)	2275, 2453
DdeI	CTNAG	6 cut(s)	18, 558, 693, 1200, 1422, 2164
DpnI	GATC	5 cut(s)	328, 510, 1005, 1011, 2463
DpnII	GATC	5 cut(s)	326, 508, 1003, 1009, 2461
DraI	TTTAAA	1 cut(s)	30
DrdI	GACNNNNNNGTC	1 cut(s)	1994
DseDI	GACNNNNNNGTC	1 cut(s)	1994
EaeI	YGGCCR	2 cut(s)	2409, 2592
Eam1104I	CTCTTC	4 cut(s)	559, 993, 1530, 1841
EarI	CTCTTC	4 cut(s)	559, 993, 1530, 1841
Ecl136II	GAGCTC	2 cut(s)	596, 1901
Eco130I	CCWWGG	2 cut(s)	1038, 2412
Eco147I	AGGCCT	1 cut(s)	1737
Eco24I	GRGCYC	3 cut(s)	598, 1903, 2342
Eco31I	GGTCTC	1 cut(s)	490
Eco32I	GATATC	1 cut(s)	1513
Eco47I	GGWCC	2 cut(s)	256, 1572
Eco53kI	GAGCTC	2 cut(s)	596, 1901
Eco57I	CTGAAG	3 cut(s)	90, 1376, 2201
Eco81I	CCTNAGG	1 cut(s)	693
Eco88I	CYCGRG	1 cut(s)	1682
Eco91I	GGTNACC	1 cut(s)	2153
EcoICRI	GAGCTC	2 cut(s)	596, 1901
EcoO109I	RGGNCCY	1 cut(s)	1023
EcoO65I	GGTNACC	1 cut(s)	2153
EcoRI	GAATTC	1 cut(s)	1946
EcoRII	CCWGG	3 cut(s)	621, 1025, 1506
EcoRV	GATATC	1 cut(s)	1513
EcoT14I	CCWWGG	2 cut(s)	1038, 2412
EcoT22I	ATGCAT	1 cut(s)	199
EcoT38I	GRGCYC	3 cut(s)	598, 1903, 2342
ErhI	CCWWGG	2 cut(s)	1038, 2412
FalI	AAGNNNNNCTT	4 cut(s)	1512, 1544, 1725, 1757
FauI	CCCGC	1 cut(s)	1571
FauNDI	CATATG	1 cut(s)	473
Fnu4HI	GCNGC	9 cut(s)	129, 585, 714, 1097, 1158, 1578, 1612, 2226, 2490
FriOI	GRGCYC	3 cut(s)	598, 1903, 2342
Fsp4HI	GCNGC	9 cut(s)	129, 585, 714, 1097, 1158, 1578, 1612, 2226, 2490
FspBI	CTAG	6 cut(s)	441, 884, 1775, 2034, 2159, 2465
GlaI	GCGC	3 cut(s)	1455, 1872, 2002
GluI	GCNGC	9 cut(s)	129, 585, 714, 1097, 1158, 1578, 1612, 2226, 2490
GsaI	CCCAGC	2 cut(s)	1492, 2086
GsuI	CTGGAG	3 cut(s)	1575, 2369, 2528
HaeIII	GGCC	8 cut(s)	272, 388, 1025, 1191, 1737, 1971, 2411, 2594
HapII	CCGG	3 cut(s)	107, 431, 2119
HhaI	GCGC	3 cut(s)	1456, 1873, 2003
Hin6I	GCGC	3 cut(s)	1454, 1871, 2001
HinP1I	GCGC	3 cut(s)	1454, 1871, 2001
HincII	GTYRAC	2 cut(s)	517, 1370
HindII	GTYRAC	2 cut(s)	517, 1370
HindIII	AAGCTT	2 cut(s)	353, 402
HpaII	CCGG	3 cut(s)	107, 431, 2119
HphI	GGTGA	6 cut(s)	778, 911, 1094, 1345, 1648, 2165
Hpy166II	GTNNAC	3 cut(s)	517, 1370, 2277
Hpy8I	GTNNAC	3 cut(s)	517, 1370, 2277
Hpy99I	CGWCG	1 cut(s)	2604
HpyAV	CCTTC	7 cut(s)	802, 1013, 1181, 1273, 1299, 1577, 1748
HpyCH4III	ACNGT	5 cut(s)	384, 1078, 1384, 2011, 2589
HpyCH4IV	ACGT	1 cut(s)	649
HpyF3I	CTNAG	6 cut(s)	18, 558, 693, 1200, 1422, 2164
HpySE526I	ACGT	1 cut(s)	649
HspAI	GCGC	3 cut(s)	1454, 1871, 2001
Kzo9I	GATC	5 cut(s)	326, 508, 1003, 1009, 2461
LguI	GCTCTTC	1 cut(s)	1530
LmnI	GCTCC	5 cut(s)	1436, 1633, 1898, 2091, 2497
Lsp1109I	GCAGC	7 cut(s)	115, 571, 725, 1169, 1589, 1598, 2501
LweI	GCATC	8 cut(s)	193, 310, 344, 372, 1540, 1629, 1818, 2352
MaeI	CTAG	6 cut(s)	441, 884, 1775, 2034, 2159, 2465
MaeII	ACGT	1 cut(s)	649
MaeIII	GTNAC	2 cut(s)	1534, 2153
MalI	GATC	5 cut(s)	328, 510, 1005, 1011, 2463
MboI	GATC	5 cut(s)	326, 508, 1003, 1009, 2461
MfeI	CAATTG	1 cut(s)	2354
MflI	RGATCY	1 cut(s)	2461
MhlI	GDGCHC	4 cut(s)	598, 1903, 2342, 2587
MlsI	TGGCCA	2 cut(s)	2411, 2594
MluNI	TGGCCA	2 cut(s)	2411, 2594
MlyI	GAGTC	6 cut(s)	172, 1207, 1291, 1489, 1531, 1672
MmeI	TCCRAC	1 cut(s)	1274
Mox20I	TGGCCA	2 cut(s)	2411, 2594
Mph1103I	ATGCAT	1 cut(s)	199
MscI	TGGCCA	2 cut(s)	2411, 2594
MseI	TTAA	6 cut(s)	29, 182, 942, 1221, 2334, 2532
MslI	CAYNNNNRTG	3 cut(s)	241, 721, 2210
Msp20I	TGGCCA	2 cut(s)	2411, 2594
MspA1I	CMGCKG	2 cut(s)	533, 1492
MspI	CCGG	3 cut(s)	107, 431, 2119
MspR9I	CCNGG	4 cut(s)	108, 623, 1027, 1508
MunI	CAATTG	1 cut(s)	2354
Mva1269I	GAATGC	1 cut(s)	199
MvaI	CCWGG	3 cut(s)	623, 1027, 1508
NciI	CCSGG	1 cut(s)	108
NcoI	CCATGG	1 cut(s)	1038
NdeI	CATATG	1 cut(s)	473
NdeII	GATC	5 cut(s)	326, 508, 1003, 1009, 2461
NlaIV	GGNNCC	2 cut(s)	258, 1024
NmuCI	GTSAC	2 cut(s)	1534, 2153
NsiI	ATGCAT	1 cut(s)	199
NspI	RCATGY	2 cut(s)	68, 1942
PaeI	GCATGC	1 cut(s)	68
PaeR7I	CTCGAG	1 cut(s)	1682
PagI	TCATGA	1 cut(s)	2433
PceI	AGGCCT	1 cut(s)	1737
PciI	ACATGT	1 cut(s)	1938
PciSI	GCTCTTC	1 cut(s)	1530
PctI	GAATGC	1 cut(s)	199
PfeI	GAWTC	5 cut(s)	703, 914, 1469, 1559, 2500
PflMI	CCANNNNNTGG	2 cut(s)	43, 2392
PfoI	TCCNGGA	1 cut(s)	1506
PinAI	ACCGGT	1 cut(s)	2118
PkrI	GCNGC	9 cut(s)	130, 586, 715, 1098, 1159, 1579, 1613, 2227, 2491
PleI	GAGTC	6 cut(s)	171, 1207, 1291, 1489, 1531, 1672
PpsI	GAGTC	6 cut(s)	171, 1207, 1291, 1489, 1531, 1672
PscI	ACATGT	1 cut(s)	1938
PsiI	TTATAA	1 cut(s)	603
Psp124BI	GAGCTC	2 cut(s)	598, 1903
Psp6I	CCWGG	3 cut(s)	621, 1025, 1506
PspEI	GGTNACC	1 cut(s)	2153
PspFI	CCCAGC	2 cut(s)	1488, 2082
PspGI	CCWGG	3 cut(s)	621, 1025, 1506
PspN4I	GGNNCC	2 cut(s)	258, 1024
PspPI	GGNCC	6 cut(s)	256, 271, 1023, 1190, 1572, 1969
PstNI	CAGNNNCTG	1 cut(s)	2255
PsuI	RGATCY	1 cut(s)	2461
PvuII	CAGCTG	2 cut(s)	533, 1492
RsaI	GTAC	2 cut(s)	2276, 2454
RsaNI	GTAC	2 cut(s)	2275, 2453
RseI	CAYNNNNRTG	3 cut(s)	241, 721, 2210
Rsr2I	CGGWCCG	1 cut(s)	1572
RsrII	CGGWCCG	1 cut(s)	1572
SacI	GAGCTC	2 cut(s)	598, 1903
SapI	GCTCTTC	1 cut(s)	1530
SaqAI	TTAA	6 cut(s)	29, 182, 942, 1221, 2334, 2532
SatI	GCNGC	9 cut(s)	129, 585, 714, 1097, 1158, 1578, 1612, 2226, 2490
Sau3AI	GATC	5 cut(s)	326, 508, 1003, 1009, 2461
Sau96I	GGNCC	6 cut(s)	256, 271, 1023, 1190, 1572, 1969
SchI	GAGTC	6 cut(s)	172, 1207, 1291, 1489, 1531, 1672
ScrFI	CCNGG	4 cut(s)	108, 623, 1027, 1508
SduI	GDGCHC	4 cut(s)	598, 1903, 2342, 2587
SfaNI	GCATC	8 cut(s)	193, 310, 344, 372, 1540, 1629, 1818, 2352
Sfr274I	CTCGAG	1 cut(s)	1682
SinI	GGWCC	2 cut(s)	256, 1572
SlaI	CTCGAG	1 cut(s)	1682
SmiMI	CAYNNNNRTG	3 cut(s)	241, 721, 2210
SmlI	CTYRAG	4 cut(s)	339, 1682, 1840, 2090
SmoI	CTYRAG	4 cut(s)	339, 1682, 1840, 2090
SphI	GCATGC	1 cut(s)	68
SseBI	AGGCCT	1 cut(s)	1737
SsiI	CCGC	5 cut(s)	131, 1097, 1564, 1575, 2225
SspI	AATATT	5 cut(s)	1033, 1126, 1958, 2055, 2139
SspMI	CTAG	6 cut(s)	441, 884, 1775, 2034, 2159, 2465
SstI	GAGCTC	2 cut(s)	598, 1903
StuI	AGGCCT	1 cut(s)	1737
StyD4I	CCNGG	4 cut(s)	106, 621, 1025, 1506
StyI	CCWWGG	2 cut(s)	1038, 2412
TaaI	ACNGT	5 cut(s)	384, 1078, 1384, 2011, 2589
TaiI	ACGT	1 cut(s)	652
TatI	WGTACW	1 cut(s)	2274
TauI	GCSGC	2 cut(s)	1099, 2228
TfiI	GAWTC	5 cut(s)	703, 914, 1469, 1559, 2500
Tru1I	TTAA	6 cut(s)	29, 182, 942, 1221, 2334, 2532
Tru9I	TTAA	6 cut(s)	29, 182, 942, 1221, 2334, 2532
TscAI	CASTG	1 cut(s)	389
TseFI	GTSAC	2 cut(s)	1534, 2153
TseI	GCWGC	7 cut(s)	128, 584, 713, 1157, 1577, 1611, 2489
Tsp45I	GTSAC	2 cut(s)	1534, 2153
TspGWI	ACGGA	1 cut(s)	2588
TspRI	CASTG	1 cut(s)	389
Van91I	CCANNNNNTGG	2 cut(s)	43, 2392
VpaK11BI	GGWCC	2 cut(s)	256, 1572
XapI	RAATTY	6 cut(s)	628, 1234, 1946, 2095, 2179, 2298
XbaI	TCTAGA	1 cut(s)	883
XceI	RCATGY	2 cut(s)	68, 1942
XcmI	CCANNNNNNNNNTGG	2 cut(s)	44, 381
XhoI	CTCGAG	1 cut(s)	1682
XspI	CTAG	6 cut(s)	441, 884, 1775, 2034, 2159, 2465
Zsp2I	ATGCAT	1 cut(s)	199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.