Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002290

Physical Location & Seq

Genomic Coordinates Forward (+)

59557737 .. 59562903

Gene Structure 5167 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0473100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1866 bp

ATGAAAATTCGTAGTGCATGCTTTGAATGCAGGGAAAGATATAGCTATGTCTTACATGGCCTTACTTCAGAATCAAACGCCGCACATCCACATCTCGATCTCGATCTAAGCTTTCGACCTTCTGATATGAAAGGGACGAGCTCTGATGCTATCGGATTAAACAAATGGCGGGAGTTTATGAAAGTCATACTAGCTAGGGAAACCATAAACACCGGCCATCACAGCCCATGCTTGCGTCGCTGGTCCTTATCCAACCCCACTAAAATCCAAACAACTCCCATCCAACCCTTGACTGCACCAAAACGTGTACGGCCAGCGTTCCCCCAGATTGCGCCATCCCATTGGCTGGGCGTCAAATTCAGAGACCCTCTACCCCCATCCCCATTGGTCCACGTCTCCCATTATAATAATTGTACGCCCCCACGATTCAATGGCTTAAAAGCCAAAGGGGGACTGGCGAAAGAGCTGCAGACACTTGGCGCTAGCAGCACAGCCCTAAACGCAAGCACCAATTTTCAGCAGCCACACACACACACACACCAAAGTTCAAAAATTCCCAAAAATAGTAACCAGCCCTTTGTTTCAGTGAGACGGCCAAATATGAATTTCAAGGGGTTCATGACCGATCTACAAGGCGACGGCGGAGGTCGGCCACTGGTAAACAACAGCAACAACAACAACAACAACGCCTTGGCGCGGCAGTCGTCGATCTATTCCCTCACGTTTGACGAGTTACAGAACACCATGGGAGGCCCAGGTAAGGACTTTGGGTCCATGAACATGGATGAGCTCTTGAAGAGTATCTGGACGGCGGAGGAGACGCAGACTCTGGTCCCTACTGGTGGTGGTGTGGTGGTGACGGGTCAAGATGGGTTTAATCAGGGCCTGCCTCTGCAGAGACAGGGGTCGTTGACGCTGCCTCGGACGCTGAGCCAGAAGACGGTGGATGAGGTGTGGAGGAATTTGTCGTCCAAGGAAGGAAATGGTGGGTCGAATGTGGTGCAGAGGCAGCAGACTTTGGGGGAAATGACGTTGGAGGAGTTTTTGGTCAGAGCTGGGGTTGTGAGAGAAGATGGTTCAAAGCCGCCGGGTAATAATGGGAGTGGGTTTTTCGGAGAGTTGGCTCGGTTTGGGAACACTGGTGGTTTAGGATTCGGGTTTCAGCAGCCGGATCGTAGTAGGATTTCGGAGAATGGTAATCAGGTTCCGAATCAGAGTTCCAATCTGCCACTGAATGCTAATGGGGTTAGAAGTCAGCAACAACAGCAGCAGATCCAAATATTTCCCAAGCAGCAACCTGTGACTTACAGCACTTCACAGATGGGTATGGGGCCGAATTCGCAGCTTGGTAGTCCTGGAATGAGGGGTGGGATTTTGGGGATTGGTGAGCAGGGTATGAGTAATGCTCTGGTTCAGAGTCCAGTGCTGCAAGGAGGAGGGATGGGAATGGTTGGATTAGGAGGTGGGAATGGTCGAGTGGCTGCAGTGTCTCCCGCGAATCAGCTGTCATCGGATGGGATTGGGAAGAGTAATGGTACTGATACGTCGTCCGTGTCACCAATGCCATATGTGTTTAACAATGGTTTTAGGGGAAGGAAAGGCGGGCCTGTGGAGAAAGTTGTTGAGAGGAGACAGAGGAGGATGATCAAGAACAGAGAGTCAGCTGCCAGATCAAGAGCTCGCAAACAGGCTTACACAATGGAGTTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGAGAACGAAAACTTGAAGAAAAAACAGGATGAAATGATGGAACTGCAGAAGAATCAGGATATGGAGATTCAAAATCTTCAAAGAGGAGGCAAGAGACGTTGCTTGAGACGAACGCAGACCGGTCCGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005788 GO:0012505 GO:0031974 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko03060 ko04141 ko04918 ko05020 map03060 map04141 map04918 map05020

Pfam Domains

Protein Families

HSP70

Protein Analysis

621

Amino Acids

67.92

Weight (kDa)

10.0

Isoelectric Point (pI)

51.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_2	PF07716	542 - 590	7.7e-09	Basic region leucine zipper
bZIP_1	PF00170	543 - 595	2.4e-13	bZIP transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002290)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53480
fragaria_vesca	FvH4_5g11510 FvH4_5g11510 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050
malus_domestica	MD01G1223400.v1.1 MD06G1112600.v1.1 MD07G1294100.v1.1 MD14G1134000.v1.1
prunus_persica	Prupe.2G313900_v2.0.a1 Prupe.5G125800_v2.0.a1
pyrus_communis	pycom01g23260 pycom06g10550 pycom07g26690
rosa_chinensis	RchiOBHm_Chr1g0381661 RchiOBHm_Chr7g0186291
rosa_laevigata	RLG00000004852 RLG00000026217
rosa_multiflora	Rmu_sc0000645.1_g000053 Rmu_sc0012555.1_g000004
rosa_roxburghii	Rroxscaffold_3G00268280
rosa_rugosa	Rorug01G0430300 Rorug01G0430300 Rorug01G0430300 Rorug01G0430300 Rorug01G0430300 Rorug06G0473100 Rorug06G0473100
rosa_samantha	Rh1AG453500 Rh1BG410700 Rh1CG425100 Rh1DG442400 Rh7AG068000 Rh7CG080000 Rh7DG080600
rosa_wichuraiana	Rw1G039560 Rw7G006700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	405
AccB7I	CCANNNNNTGG	1 cut(s)	346
AccII	CGCG	2 cut(s)	697, 1496
AciI	CCGC	8 cut(s)	81, 169, 642, 697, 812, 1085, 1494, 1602
AclWI	GGATC	2 cut(s)	1179, 1267
AcoI	YGGCCR	4 cut(s)	214, 311, 593, 650
AcsI	RAATTY	6 cut(s)	6, 356, 552, 604, 961, 1336
AcuI	CTGAAG	1 cut(s)	51
AcyI	GRCGYC	1 cut(s)	351
AfaI	GTAC	3 cut(s)	309, 415, 1537
AfiI	CCNNNNNNNGG	6 cut(s)	346, 696, 760, 842, 940, 1860
AflIII	ACRYGT	1 cut(s)	304
AgeI	ACCGGT	1 cut(s)	1853
AgsI	TTSAA	9 cut(s)	26, 430, 549, 610, 796, 1080, 1750, 1805, 1814
AhdI	GACNNNNNGTC	1 cut(s)	769
AjiI	CACGTC	1 cut(s)	394
AjnI	CCWGG	2 cut(s)	754, 1354
Alw21I	GWGCWC	3 cut(s)	143, 792, 1681
Alw26I	GTCTC	9 cut(s)	357, 400, 583, 812, 892, 1494, 1624, 1822, 1834
AlwI	GGATC	2 cut(s)	1179, 1267
AlwNI	CAGNNNCTG	2 cut(s)	829, 886
AoxI	GGCC	9 cut(s)	58, 214, 311, 593, 650, 751, 883, 1331, 1604
ApoI	RAATTY	6 cut(s)	6, 356, 552, 604, 961, 1336
ArsI	GACNNNNNNTTYG	2 cut(s)	1490, 1522
AsiGI	ACCGGT	1 cut(s)	1853
AspLEI	GCGC	3 cut(s)	334, 482, 697
AspS9I	GGNCC	9 cut(s)	243, 388, 752, 771, 832, 883, 1331, 1604, 1856
AsuC2I	CCSGG	1 cut(s)	1089
AsuHPI	GGTGA	3 cut(s)	868, 1397, 1548
AsuNHI	GCTAGC	1 cut(s)	482
AvaII	GGWCC	5 cut(s)	243, 388, 771, 832, 1856
BanII	GRGCYC	3 cut(s)	143, 792, 1681
BbsI	GAAGAC	1 cut(s)	944
Bbv12I	GWGCWC	3 cut(s)	143, 792, 1681
BceAI	ACGGC	4 cut(s)	326, 608, 655, 825
BcgI	CGANNNNNNTGC	6 cut(s)	448, 482, 982, 1016, 1154, 1188
BciT130I	CCWGG	2 cut(s)	756, 1356
BclI	TGATCA	1 cut(s)	1644
BcnI	CCSGG	1 cut(s)	1089
BcoDI	GTCTC	9 cut(s)	357, 400, 583, 812, 892, 1494, 1624, 1822, 1834
BfaI	CTAG	3 cut(s)	191, 195, 483
BfmI	CTRYAG	4 cut(s)	467, 893, 1482, 1778
BfoI	RGCGCY	1 cut(s)	483
BlpI	GCTNAGC	1 cut(s)	929
Bme1390I	CCNGG	3 cut(s)	756, 1089, 1356
Bme18I	GGWCC	5 cut(s)	243, 388, 771, 832, 1856
BmeRI	GACNNNNNGTC	1 cut(s)	769
BmgBI	CACGTC	1 cut(s)	394
BmgT120I	GGNCC	9 cut(s)	243, 388, 752, 771, 832, 883, 1331, 1604, 1856
BmiI	GGNNCC	4 cut(s)	772, 834, 1206, 1332
BmrFI	CCNGG	3 cut(s)	756, 1089, 1356
BmsI	GCATC	1 cut(s)	136
BmtI	GCTAGC	1 cut(s)	486
BoxI	GACNNNNGTC	2 cut(s)	830, 904
BpiI	GAAGAC	1 cut(s)	944
BplI	GAGNNNNNCTC	2 cut(s)	1390, 1422
Bpu1102I	GCTNAGC	1 cut(s)	929
BpuEI	CTTGAG	1 cut(s)	1858
BpuMI	CCSGG	1 cut(s)	1089
BsaBI	GATNNNNATC	1 cut(s)	102
BsaHI	GRCGYC	1 cut(s)	351
BsaI	GGTCTC	1 cut(s)	357
BsaJI	CCNNGG	6 cut(s)	690, 744, 754, 920, 972, 1859
BsaWI	WCCGGW	1 cut(s)	1853
Bsc4I	CCNNNNNNNGG	6 cut(s)	346, 696, 760, 842, 940, 1860
Bse118I	RCCGGY	2 cut(s)	212, 1853
Bse1I	ACTGG	5 cut(s)	459, 660, 844, 1144, 1421
Bse8I	GATNNNNATC	1 cut(s)	102
BseBI	CCWGG	2 cut(s)	756, 1356
BseDI	CCNNGG	6 cut(s)	690, 744, 754, 920, 972, 1859
BseJI	GATNNNNATC	1 cut(s)	102
BseLI	CCNNNNNNNGG	6 cut(s)	346, 696, 760, 842, 940, 1860
BseMII	CTCAG	1 cut(s)	920
BseNI	ACTGG	5 cut(s)	459, 660, 844, 1144, 1421
BseRI	GAGGAG	7 cut(s)	830, 1052, 1449, 1642, 1651, 1748, 1833
BseYI	CCCAGC	2 cut(s)	346, 1055
BsgI	GTGCAG	2 cut(s)	279, 1022
Bsh1236I	CGCG	2 cut(s)	697, 1496
BshFI	GGCC	9 cut(s)	60, 216, 313, 595, 652, 753, 885, 1333, 1606
BshTI	ACCGGT	1 cut(s)	1853
BsiHKAI	GWGCWC	3 cut(s)	143, 792, 1681
BsiSI	CCGG	4 cut(s)	213, 1088, 1169, 1854
BslFI	GGGAC	3 cut(s)	148, 465, 818
BslI	CCNNNNNNNGG	6 cut(s)	346, 696, 760, 842, 940, 1860
BsmAI	GTCTC	9 cut(s)	357, 400, 583, 812, 892, 1494, 1624, 1822, 1834
BsmBI	CGTCTC	5 cut(s)	400, 583, 812, 1822, 1834
BsmFI	GGGAC	3 cut(s)	148, 465, 818
BsmI	GAATGC	2 cut(s)	32, 1240
BsnI	GGCC	9 cut(s)	60, 216, 313, 595, 652, 753, 885, 1333, 1606
Bso31I	GGTCTC	1 cut(s)	357
Bsp1286I	GDGCHC	3 cut(s)	143, 792, 1681
Bsp143I	GATC	8 cut(s)	97, 103, 625, 708, 1171, 1272, 1644, 1670
Bsp1720I	GCTNAGC	1 cut(s)	929
Bsp19I	CCATGG	1 cut(s)	744
BspACI	CCGC	8 cut(s)	81, 169, 642, 697, 812, 1085, 1494, 1602
BspANI	GGCC	9 cut(s)	60, 216, 313, 595, 652, 753, 885, 1333, 1606
BspCNI	CTCAG	1 cut(s)	921
BspFNI	CGCG	2 cut(s)	697, 1496
BspHI	TCATGA	1 cut(s)	618
BspLI	GGNNCC	4 cut(s)	772, 834, 1206, 1332
BspMAI	CTGCAG	4 cut(s)	471, 897, 1486, 1782
BspOI	GCTAGC	1 cut(s)	486
BspPI	GGATC	2 cut(s)	1179, 1267
BspTNI	GGTCTC	1 cut(s)	357
BsrFI	RCCGGY	2 cut(s)	212, 1853
BsrI	ACTGG	5 cut(s)	459, 660, 844, 1144, 1421
BssAI	RCCGGY	2 cut(s)	212, 1853
BssECI	CCNNGG	6 cut(s)	690, 744, 754, 920, 972, 1859
BssMI	GATC	8 cut(s)	97, 103, 625, 708, 1171, 1272, 1644, 1670
BssNI	GRCGYC	1 cut(s)	351
BssT1I	CCWWGG	3 cut(s)	690, 744, 972
Bst2UI	CCWGG	2 cut(s)	756, 1356
Bst4CI	ACNGT	1 cut(s)	943
Bst6I	CTCTTC	2 cut(s)	791, 1520
BstACI	GRCGYC	1 cut(s)	351
BstAPI	GCANNNNNTGC	1 cut(s)	1718
BstC8I	GCNNGC	8 cut(s)	19, 233, 315, 484, 505, 887, 1604, 1681
BstDEI	CTNAG	2 cut(s)	107, 929
BstDSI	CCRYGG	2 cut(s)	744, 1859
BstFNI	CGCG	2 cut(s)	697, 1496
BstH2I	RGCGCY	1 cut(s)	483
BstHHI	GCGC	3 cut(s)	334, 482, 697
BstKTI	GATC	8 cut(s)	100, 106, 628, 711, 1174, 1275, 1647, 1673
BstMAI	GTCTC	9 cut(s)	357, 400, 583, 812, 892, 1494, 1624, 1822, 1834
BstMBI	GATC	8 cut(s)	97, 103, 625, 708, 1171, 1272, 1644, 1670
BstNI	CCWGG	2 cut(s)	756, 1356
BstNSI	RCATGY	1 cut(s)	21
BstPAI	GACNNNNGTC	2 cut(s)	830, 904
BstSCI	CCNGG	3 cut(s)	754, 1087, 1354
BstSFI	CTRYAG	4 cut(s)	467, 893, 1482, 1778
BstUI	CGCG	2 cut(s)	697, 1496
BstV2I	GAAGAC	1 cut(s)	944
BstX2I	RGATCY	1 cut(s)	1272
BstXI	CCANNNNNNTGG	2 cut(s)	342, 781
BstYI	RGATCY	1 cut(s)	1272
BsuRI	GGCC	9 cut(s)	60, 216, 313, 595, 652, 753, 885, 1333, 1606
BtgI	CCRYGG	2 cut(s)	744, 1859
BtrI	CACGTC	1 cut(s)	394
BtsI	GCAGTG	1 cut(s)	1491
BtsIMutI	CAGTG	6 cut(s)	591, 653, 1137, 1229, 1428, 1491
Cac8I	GCNNGC	8 cut(s)	19, 233, 315, 484, 505, 887, 1604, 1681
CaiI	CAGNNNCTG	2 cut(s)	829, 886
CciI	TCATGA	1 cut(s)	618
CfoI	GCGC	3 cut(s)	334, 482, 697
Cfr10I	RCCGGY	2 cut(s)	212, 1853
Cfr13I	GGNCC	9 cut(s)	243, 388, 752, 771, 832, 883, 1331, 1604, 1856
CpoI	CGGWCCG	1 cut(s)	1856
CseI	GACGC	5 cut(s)	224, 340, 829, 922, 934
Csp6I	GTAC	3 cut(s)	308, 414, 1536
CspAI	ACCGGT	1 cut(s)	1853
CspI	CGGWCCG	1 cut(s)	1856
CviAII	CATG	7 cut(s)	18, 56, 228, 619, 745, 775, 781
CviQI	GTAC	3 cut(s)	308, 414, 1536
DdeI	CTNAG	2 cut(s)	107, 929
DpnI	GATC	8 cut(s)	99, 105, 627, 710, 1173, 1274, 1646, 1672
DpnII	GATC	8 cut(s)	97, 103, 625, 708, 1171, 1272, 1644, 1670
DriI	GACNNNNNGTC	1 cut(s)	769
EaeI	YGGCCR	4 cut(s)	214, 311, 593, 650
Eam1104I	CTCTTC	2 cut(s)	791, 1520
Eam1105I	GACNNNNNGTC	1 cut(s)	769
EarI	CTCTTC	2 cut(s)	791, 1520
EciI	GGCGGA	2 cut(s)	657, 827
Ecl136II	GAGCTC	3 cut(s)	141, 790, 1679
Eco130I	CCWWGG	3 cut(s)	690, 744, 972
Eco24I	GRGCYC	3 cut(s)	143, 792, 1681
Eco31I	GGTCTC	1 cut(s)	357
Eco47I	GGWCC	5 cut(s)	243, 388, 771, 832, 1856
Eco53kI	GAGCTC	3 cut(s)	141, 790, 1679
Eco57I	CTGAAG	1 cut(s)	51
EcoICRI	GAGCTC	3 cut(s)	141, 790, 1679
EcoO109I	RGGNCCY	1 cut(s)	883
EcoRI	GAATTC	1 cut(s)	1336
EcoRII	CCWGG	2 cut(s)	754, 1354
EcoT14I	CCWWGG	3 cut(s)	690, 744, 972
EcoT38I	GRGCYC	3 cut(s)	143, 792, 1681
ErhI	CCWWGG	3 cut(s)	690, 744, 972
Esp3I	CGTCTC	5 cut(s)	400, 583, 812, 1822, 1834
FaeI	CATG	7 cut(s)	21, 59, 231, 622, 748, 778, 784
FaqI	GGGAC	3 cut(s)	148, 465, 818
FatI	CATG	7 cut(s)	17, 55, 227, 618, 744, 774, 780
FauI	CCCGC	3 cut(s)	162, 1501, 1595
FauNDI	CATATG	1 cut(s)	1567
FbaI	TGATCA	1 cut(s)	1644
FriOI	GRGCYC	3 cut(s)	143, 792, 1681
FspBI	CTAG	3 cut(s)	191, 195, 483
GlaI	GCGC	3 cut(s)	333, 481, 696
GsaI	CCCAGC	2 cut(s)	350, 1059
HaeII	RGCGCY	1 cut(s)	483
HaeIII	GGCC	9 cut(s)	60, 216, 313, 595, 652, 753, 885, 1333, 1606
HapII	CCGG	4 cut(s)	213, 1088, 1169, 1854
HgaI	GACGC	5 cut(s)	224, 340, 829, 922, 934
HhaI	GCGC	3 cut(s)	334, 482, 697
Hin1I	GRCGYC	1 cut(s)	351
Hin1II	CATG	7 cut(s)	21, 59, 231, 622, 748, 778, 784
Hin6I	GCGC	3 cut(s)	332, 480, 695
HinP1I	GCGC	3 cut(s)	332, 480, 695
HincII	GTYRAC	1 cut(s)	912
HindII	GTYRAC	1 cut(s)	912
HindIII	AAGCTT	1 cut(s)	109
HpaII	CCGG	4 cut(s)	213, 1088, 1169, 1854
HphI	GGTGA	3 cut(s)	868, 1397, 1548
Hpy166II	GTNNAC	4 cut(s)	308, 391, 661, 912
Hpy188III	TCNNGA	9 cut(s)	95, 101, 619, 793, 805, 866, 1648, 1674, 1790
Hpy8I	GTNNAC	4 cut(s)	308, 391, 661, 912
Hpy99I	CGWCG	4 cut(s)	240, 641, 709, 1549
HpyAV	CCTTC	3 cut(s)	129, 971, 1587
HpyCH4III	ACNGT	1 cut(s)	943
HpyCH4IV	ACGT	6 cut(s)	304, 393, 722, 1031, 1544, 1831
HpyF3I	CTNAG	2 cut(s)	107, 929
HpySE526I	ACGT	6 cut(s)	304, 393, 722, 1031, 1544, 1831
Hsp92I	GRCGYC	1 cut(s)	351
Hsp92II	CATG	7 cut(s)	21, 59, 231, 622, 748, 778, 784
HspAI	GCGC	3 cut(s)	332, 480, 695
Ksp22I	TGATCA	1 cut(s)	1644
Kzo9I	GATC	8 cut(s)	97, 103, 625, 708, 1171, 1272, 1644, 1670
LweI	GCATC	1 cut(s)	136
MaeI	CTAG	3 cut(s)	191, 195, 483
MaeII	ACGT	6 cut(s)	304, 393, 722, 1031, 1544, 1831
MaeIII	GTNAC	5 cut(s)	566, 732, 856, 1300, 1554
MalI	GATC	8 cut(s)	99, 105, 627, 710, 1173, 1274, 1646, 1672
MboI	GATC	8 cut(s)	97, 103, 625, 708, 1171, 1272, 1644, 1670
MboII	GAAGA	7 cut(s)	808, 949, 1082, 1537, 1762, 1795, 1802
MflI	RGATCY	1 cut(s)	1272
MhlI	GDGCHC	3 cut(s)	143, 792, 1681
MluCI	AATT	8 cut(s)	6, 356, 409, 511, 552, 604, 961, 1336
MlyI	GAGTC	3 cut(s)	820, 1426, 1667
MmeI	TCCRAC	5 cut(s)	276, 307, 1014, 1432, 1686
MseI	TTAA	4 cut(s)	158, 437, 876, 1575
MslI	CAYNNNNRTG	1 cut(s)	779
MspA1I	CMGCKG	2 cut(s)	1504, 1664
MspI	CCGG	4 cut(s)	213, 1088, 1169, 1854
MspR9I	CCNGG	3 cut(s)	756, 1089, 1356
Mva1269I	GAATGC	2 cut(s)	32, 1240
MvaI	CCWGG	2 cut(s)	756, 1356
MvnI	CGCG	2 cut(s)	697, 1496
NciI	CCSGG	1 cut(s)	1089
NcoI	CCATGG	1 cut(s)	744
NdeI	CATATG	1 cut(s)	1567
NdeII	GATC	8 cut(s)	97, 103, 625, 708, 1171, 1272, 1644, 1670
NheI	GCTAGC	1 cut(s)	482
NlaIII	CATG	7 cut(s)	21, 59, 231, 622, 748, 778, 784
NlaIV	GGNNCC	4 cut(s)	772, 834, 1206, 1332
NmuCI	GTSAC	3 cut(s)	856, 1300, 1554
NspI	RCATGY	1 cut(s)	21
PaeI	GCATGC	1 cut(s)	21
PagI	TCATGA	1 cut(s)	618
PctI	GAATGC	2 cut(s)	32, 1240
PfeI	GAWTC	7 cut(s)	71, 426, 1152, 1210, 1498, 1786, 1801
PflMI	CCANNNNNTGG	1 cut(s)	346
PfoI	TCCNGGA	1 cut(s)	1354
PinAI	ACCGGT	1 cut(s)	1853
PleI	GAGTC	3 cut(s)	820, 1425, 1666
PpsI	GAGTC	3 cut(s)	820, 1425, 1666
PshAI	GACNNNNGTC	2 cut(s)	830, 904
PsiI	TTATAA	1 cut(s)	405
Psp124BI	GAGCTC	3 cut(s)	143, 792, 1681
Psp6I	CCWGG	2 cut(s)	754, 1354
PspFI	CCCAGC	2 cut(s)	346, 1055
PspGI	CCWGG	2 cut(s)	754, 1354
PspN4I	GGNNCC	4 cut(s)	772, 834, 1206, 1332
PspPI	GGNCC	9 cut(s)	243, 388, 752, 771, 832, 883, 1331, 1604, 1856
PstI	CTGCAG	4 cut(s)	471, 897, 1486, 1782
PstNI	CAGNNNCTG	2 cut(s)	829, 886
PsuI	RGATCY	1 cut(s)	1272
PvuII	CAGCTG	2 cut(s)	1504, 1664
RsaI	GTAC	3 cut(s)	309, 415, 1537
RsaNI	GTAC	3 cut(s)	308, 414, 1536
RseI	CAYNNNNRTG	1 cut(s)	779
Rsr2I	CGGWCCG	1 cut(s)	1856
RsrII	CGGWCCG	1 cut(s)	1856
SacI	GAGCTC	3 cut(s)	143, 792, 1681
SaqAI	TTAA	4 cut(s)	158, 437, 876, 1575
Sau3AI	GATC	8 cut(s)	97, 103, 625, 708, 1171, 1272, 1644, 1670
Sau96I	GGNCC	9 cut(s)	243, 388, 752, 771, 832, 883, 1331, 1604, 1856
SchI	GAGTC	3 cut(s)	820, 1426, 1667
ScrFI	CCNGG	3 cut(s)	756, 1089, 1356
SduI	GDGCHC	3 cut(s)	143, 792, 1681
SfaNI	GCATC	1 cut(s)	136
SfcI	CTRYAG	4 cut(s)	467, 893, 1482, 1778
SinI	GGWCC	5 cut(s)	243, 388, 771, 832, 1856
SmiMI	CAYNNNNRTG	1 cut(s)	779
SmlI	CTYRAG	1 cut(s)	1837
SmoI	CTYRAG	1 cut(s)	1837
SphI	GCATGC	1 cut(s)	21
Sse9I	AATT	8 cut(s)	6, 356, 409, 511, 552, 604, 961, 1336
SsiI	CCGC	8 cut(s)	81, 169, 642, 697, 812, 1085, 1494, 1602
SspI	AATATT	1 cut(s)	1281
SspMI	CTAG	3 cut(s)	191, 195, 483
SstI	GAGCTC	3 cut(s)	143, 792, 1681
StyD4I	CCNGG	3 cut(s)	754, 1087, 1354
StyI	CCWWGG	3 cut(s)	690, 744, 972
TaaI	ACNGT	1 cut(s)	943
TaiI	ACGT	6 cut(s)	307, 396, 725, 1034, 1547, 1834
TaqI	TCGA	6 cut(s)	96, 102, 115, 707, 992, 1474
TaqII	GACCGA	1 cut(s)	638
TasI	AATT	8 cut(s)	6, 356, 409, 511, 552, 604, 961, 1336
TauI	GCSGC	3 cut(s)	83, 700, 1087
TfiI	GAWTC	7 cut(s)	71, 426, 1152, 1210, 1498, 1786, 1801
Tru1I	TTAA	4 cut(s)	158, 437, 876, 1575
Tru9I	TTAA	4 cut(s)	158, 437, 876, 1575
TscAI	CASTG	6 cut(s)	591, 660, 1144, 1236, 1428, 1491
TseFI	GTSAC	3 cut(s)	856, 1300, 1554
Tsp45I	GTSAC	3 cut(s)	856, 1300, 1554
TspDTI	ATGAA	7 cut(s)	17, 143, 194, 607, 617, 791, 1779
TspGWI	ACGGA	2 cut(s)	1540, 1848
TspRI	CASTG	6 cut(s)	591, 660, 1144, 1236, 1428, 1491
Van91I	CCANNNNNTGG	1 cut(s)	346
VpaK11BI	GGWCC	5 cut(s)	243, 388, 771, 832, 1856
XapI	RAATTY	6 cut(s)	6, 356, 552, 604, 961, 1336
XceI	RCATGY	1 cut(s)	21
XcmI	CCANNNNNNNNNTGG	1 cut(s)	451
XspI	CTAG	3 cut(s)	191, 195, 483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.