Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0002290

Physical Location & Seq

Genomic Coordinates Reverse (-)

20632830 .. 20635266

Gene Structure 2437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g23260.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

ATGTTCTTGTTACAGATCCTCACTTCCCCTGTAGCTGATGCCCGTTCAACTACCTCTCAAGTTATTGCAAAGGTTGCGGGCATTGAGTTGCCCATGAAACAGTGGCCGGAATTGATTGGATCACTATTGTCAAATATTCACCAGTTACCAGCTCATGTAAAGCAAGCCACTTTAGAGACTCTTGGGTATTTGTGTGAGGAAATCTCTTCTGATGTCGTAGATCAAGATCAAGTGAATAAAATACTGACAGCTGTAGTTCAGGGTATGAACGCAACTGAAGGGAACAATGATGTTAGGCTTGCTGCTACCCGAGCACTGTACAATGCTTTGAGTTTTATTCAGGCCAATTTTAGCAATGACATGGAGCGTGATTATATTATGAGAGTTGTCTGTGAGGCAATTCTGTCCCCTGAAGTGAAGATTCGACAGGCGGCTTTTGAGTGTTTAGTTTCCATTTCTTCATCTTATTACGAGAAATTAGCCCCTTACATTCAGGACATATTTAGCATCACAGCAAAAGCTGTAAGGGAAGACCAGGAACCTGTTGCTCTTCAAGCCATTGAATTCTGGAGTTCGATTTGTGATGAGGAGATCGATATATTGGATGATTATGTGGGTGATTTTAGTGGGGACTCTGATATTCCGTGCTTCTACTTTATCAAGCAGGCAATCCCTGCCCTTGTTCCTATGCTTTTGGAGACGCTTCTTAAGCAGGAAGATGATCAGGAGGAAGATGGGGCTTGGAATATTGCTATGGCTGGGGGGACTTGCCTTGGGTTGGTTGCTCGGACAGTGGGAGATGATATTGTTCCACTTGTTATGCCTTTCATCGAAGAGAACATAACAAAACCAGATTGGAGGCAAAGAGAAGCAGCTACTTATGCGTTTGGTTCTATCTTGGAGGGTCCTTCGCCAAACAAGTTAACATCTATTGTCAATGTTGCTATGACGTTCATGCTCAGTGCCTTAACAAAGGACCCAAACAACCATGTGAAGGACACTACTGCCTGGACATTGGGAAGAATTTTTGAATTCCTTCATGGTTCAACTATGGATACACCCATAATTACCCCAGCAAACTGCCAACAGATCATCACAGTTCTTCTTCAGAGCATGAAAGATGTTCCAAACGTTGCTGAGAAGGCATGCGGTGCTCTCTATTTTCTGGCCCAGGGCTATGAGGATTTTGGCCCGTCATCTTCCATTGCTCCTTTTTTCCAGGAAATTGTACAGGCTTTACTCACTGTTACTCACAGACCAGATGCGGGGGAATCACGATTAAGGACTGCTGCATATGAAGCGTTGAATGAAGTCGTCAGATGTTCGACTGATGAAACTGCCCCCATGGTGTTGCAACTTGTTCCCGTTATCATGATTGAACTGCATCAGACTCTTGAGGCCCAGCAGCTTGCGTCTGATGAGAAAGAGAGGCAGAGTGAACTACAAGGACTTCTTTGTGGCTGTTTACAGATAATAGGACTTTTCTTGAGGGTATTTGCTTGTAGAAGTGCTACTGTCCATGAGGAAGCCATGCTTGCCATTGGGGCCCTTGCATATACAAGTGGCCCGGATTTTGCAAAATACTTGCCTGAGTTTTACAAGTATCTCGAAATGGGGCTTCAAAATTTTGAGGAGTACCAAATCTGTGCTGTCACGGTTGGTGTTGTAGGAGATATTTGTAGAGCAGTGGAAGATAAGATTCTTCCTTATTGTGATGGAATTATGACCCAGCTTCTCAAGGATTTATCAAGCAACCAGTTGCACCGTTCCGTAAAGCCTCCTATATTCTCCTGCTTTGGTGATATAGCTCTTGCAATAGGAGAGAACTTTGATAAGTACTTGATGTACGCCATGCCAATGATTCAGAGTGCTGCAGAGATGTCTGCCCACACAGCAAGTGCTGATGATGTAATGACAGAGTACACCAATTCTCTGAGAAACGGAATCTTGGAGGCATATTCTGGGATTTTCCAAGGTTTCAAGAACTCCCCGAAAACCCAGGTTTTGATAACTTATGCTCCTCACATCCTGCAGTTCTTGGATAGCTTATACAAGAGGAAAGACATGGATGAAGTGGTGATGAAAACAGCCATTGGTGTCCTTGGAGATCTAGCAGATACACTGGGAAATAATGCTGGTTCTTTGATACAGCAATCTCAATCGTGCAGAGACTTTTTAAATGAGTGCTTGTCTTCCGAAGACAATTTGATTAAAGAATCTGCAGAATGGGCCAAGATGGCCATCAGTCGTGCCATTTCAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

HEAT HEAT_EZ IBN_N

Protein Analysis

755

Amino Acids

83.27

Weight (kDa)

4.52

Isoelectric Point (pI)

50.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002290)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53480
fragaria_vesca	FvH4_5g11510 FvH4_5g11510 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050 FvH4_7g32050
malus_domestica	MD01G1223400.v1.1 MD06G1112600.v1.1 MD07G1294100.v1.1 MD14G1134000.v1.1
prunus_persica	Prupe.2G313900_v2.0.a1 Prupe.5G125800_v2.0.a1
pyrus_communis	pycom01g23260 pycom06g10550 pycom07g26690
rosa_chinensis	RchiOBHm_Chr1g0381661 RchiOBHm_Chr7g0186291
rosa_laevigata	RLG00000004852 RLG00000026217
rosa_multiflora	Rmu_sc0000645.1_g000053 Rmu_sc0012555.1_g000004
rosa_roxburghii	Rroxscaffold_3G00268280
rosa_rugosa	Rorug01G0430300 Rorug01G0430300 Rorug01G0430300 Rorug01G0430300 Rorug01G0430300 Rorug06G0473100 Rorug06G0473100
rosa_samantha	Rh1AG453500 Rh1BG410700 Rh1CG425100 Rh1DG442400 Rh7AG068000 Rh7CG080000 Rh7DG080600
rosa_wichuraiana	Rw1G039560 Rw7G006700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	4 cut(s)	77, 431, 1149, 1265
AclI	AACGTT	1 cut(s)	1131
AclWI	GGATC	2 cut(s)	10, 127
AcoI	YGGCCR	2 cut(s)	104, 2238
AcsI	RAATTY	4 cut(s)	563, 1023, 1031, 1624
AcuI	CTGAAG	3 cut(s)	297, 432, 1091
AfaI	GTAC	6 cut(s)	320, 1230, 1637, 1838, 1847, 1922
AfiI	CCNNNNNNNGG	3 cut(s)	778, 994, 1265
AflII	CTTAAG	1 cut(s)	707
AgsI	TTSAA	9 cut(s)	48, 554, 563, 1031, 1047, 1306, 1379, 1622, 1981
AjnI	CCWGG	5 cut(s)	534, 1007, 1170, 1218, 1998
AluBI	AGCT	9 cut(s)	35, 152, 251, 521, 875, 1408, 1732, 1808, 2046
AluI	AGCT	9 cut(s)	35, 152, 251, 521, 875, 1408, 1732, 1808, 2046
Alw21I	GWGCWC	2 cut(s)	316, 1156
Alw26I	GTCTC	3 cut(s)	170, 692, 2163
AlwI	GGATC	2 cut(s)	10, 127
Ama87I	CYCGRG	1 cut(s)	309
AoxI	GGCC	9 cut(s)	104, 342, 1167, 1189, 1398, 1545, 1564, 2229, 2238
ApaI	GGGCCC	1 cut(s)	1549
ApeKI	GCWGC	5 cut(s)	302, 872, 1289, 1405, 1871
ApoI	RAATTY	4 cut(s)	563, 1023, 1031, 1624
Asp700I	GAANNNNTTC	1 cut(s)	1035
AspS9I	GGNCC	9 cut(s)	905, 976, 1168, 1190, 1399, 1545, 1546, 1565, 2229
AsuC2I	CCSGG	1 cut(s)	1568
AsuHPI	GGTGA	4 cut(s)	131, 629, 1811, 2089
AvaI	CYCGRG	1 cut(s)	309
AvaII	GGWCC	2 cut(s)	905, 976
BaeGI	GKGCMC	1 cut(s)	1549
BalI	TGGCCA	1 cut(s)	2240
BanII	GRGCYC	1 cut(s)	1549
BbsI	GAAGAC	3 cut(s)	537, 2184, 2205
Bbv12I	GWGCWC	2 cut(s)	316, 1156
BbvI	GCAGC	5 cut(s)	289, 884, 1276, 1417, 1858
BccI	CCATC	4 cut(s)	728, 1709, 2230, 2249
BciT130I	CCWGG	5 cut(s)	536, 1009, 1172, 1220, 2000
BciVI	GTATCC	1 cut(s)	1048
BclI	TGATCA	1 cut(s)	721
BcnI	CCSGG	1 cut(s)	1568
BcoDI	GTCTC	3 cut(s)	170, 692, 2163
BfaI	CTAG	1 cut(s)	2111
BfmI	CTRYAG	5 cut(s)	30, 252, 1872, 2030, 2220
BfrI	CTTAAG	1 cut(s)	707
BfuI	GTATCC	1 cut(s)	1048
BglI	GCCNNNNNGGC	2 cut(s)	1544, 2237
BglII	AGATCT	1 cut(s)	2107
BisI	GCNGC	6 cut(s)	303, 432, 873, 1290, 1406, 1872
BlsI	GCNGC	6 cut(s)	304, 433, 874, 1291, 1407, 1873
BmcAI	AGTACT	1 cut(s)	1838
Bme1390I	CCNGG	6 cut(s)	536, 1009, 1172, 1220, 1568, 2000
Bme18I	GGWCC	2 cut(s)	905, 976
BmeT110I	CYCGRG	1 cut(s)	309
BmgT120I	GGNCC	9 cut(s)	905, 976, 1168, 1190, 1399, 1545, 1546, 1565, 2229
BmiI	GGNNCC	5 cut(s)	540, 906, 978, 1546, 1547
BmrFI	CCNGG	6 cut(s)	536, 1009, 1172, 1220, 1568, 2000
BmrI	ACTGGG	1 cut(s)	2132
BmsI	GCATC	4 cut(s)	28, 516, 1252, 1393
BmuI	ACTGGG	1 cut(s)	2132
BpiI	GAAGAC	3 cut(s)	537, 2184, 2205
BplI	GAGNNNNNCTC	2 cut(s)	188, 220
BpmI	CTGGAG	1 cut(s)	589
BpuEI	CTTGAG	4 cut(s)	42, 1415, 1507, 1721
BpuMI	CCSGG	1 cut(s)	1568
Bsa29I	ATCGAT	1 cut(s)	594
BsaBI	GATNNNNATC	2 cut(s)	225, 2240
BsaJI	CCNNGG	7 cut(s)	772, 1170, 1171, 1344, 1972, 1998, 2101
BsaXI	ACNNNNNCTCC	2 cut(s)	2002, 2032
Bsc4I	CCNNNNNNNGG	3 cut(s)	778, 994, 1265
Bse1I	ACTGG	3 cut(s)	142, 1756, 2127
Bse3DI	GCAATG	2 cut(s)	361, 1203
Bse8I	GATNNNNATC	2 cut(s)	225, 2240
BseBI	CCWGG	5 cut(s)	536, 1009, 1172, 1220, 2000
BseCI	ATCGAT	1 cut(s)	594
BseDI	CCNNGG	7 cut(s)	772, 1170, 1171, 1344, 1972, 1998, 2101
BseGI	GGATG	3 cut(s)	610, 2025, 2074
BseJI	GATNNNNATC	2 cut(s)	225, 2240
BseLI	CCNNNNNNNGG	3 cut(s)	778, 994, 1265
BseMI	GCAATG	2 cut(s)	361, 1203
BseMII	CTCAG	4 cut(s)	973, 1128, 1581, 1925
BseNI	ACTGG	3 cut(s)	142, 1756, 2127
BseRI	GAGGAG	3 cut(s)	602, 1646, 2010
BseSI	GKGCMC	1 cut(s)	1549
BseXI	GCAGC	5 cut(s)	289, 884, 1276, 1417, 1858
BseYI	CCCAGC	4 cut(s)	758, 1072, 1401, 1728
BsgI	GTGCAG	1 cut(s)	2185
BshFI	GGCC	9 cut(s)	106, 344, 1169, 1191, 1400, 1547, 1566, 2231, 2240
BshVI	ATCGAT	1 cut(s)	594
BsiHKAI	GWGCWC	2 cut(s)	316, 1156
BsiHKCI	CYCGRG	1 cut(s)	309
BsiSI	CCGG	2 cut(s)	107, 1568
BslFI	GGGAC	3 cut(s)	391, 644, 778
BslI	CCNNNNNNNGG	3 cut(s)	778, 994, 1265
BsmAI	GTCTC	3 cut(s)	170, 692, 2163
BsmBI	CGTCTC	1 cut(s)	692
BsmFI	GGGAC	3 cut(s)	391, 644, 778
BsnI	GGCC	9 cut(s)	106, 344, 1169, 1191, 1400, 1547, 1566, 2231, 2240
BsoBI	CYCGRG	1 cut(s)	309
Bsp120I	GGGCCC	1 cut(s)	1545
Bsp1286I	GDGCHC	3 cut(s)	316, 1156, 1549
Bsp1407I	TGTACA	2 cut(s)	318, 1228
Bsp143I	GATC	8 cut(s)	15, 119, 220, 226, 591, 721, 1089, 2107
Bsp19I	CCATGG	1 cut(s)	1344
BspACI	CCGC	4 cut(s)	77, 431, 1149, 1265
BspANI	GGCC	9 cut(s)	106, 344, 1169, 1191, 1400, 1547, 1566, 2231, 2240
BspCNI	CTCAG	4 cut(s)	972, 1129, 1582, 1926
BspDI	ATCGAT	1 cut(s)	594
BspHI	TCATGA	1 cut(s)	1371
BspLI	GGNNCC	5 cut(s)	540, 906, 978, 1546, 1547
BspMAI	CTGCAG	3 cut(s)	1876, 2034, 2224
BspPI	GGATC	2 cut(s)	10, 127
BspQI	GCTCTTC	1 cut(s)	555
BspTI	CTTAAG	1 cut(s)	707
BsrDI	GCAATG	2 cut(s)	361, 1203
BsrGI	TGTACA	2 cut(s)	318, 1228
BsrI	ACTGG	3 cut(s)	142, 1756, 2127
BssECI	CCNNGG	7 cut(s)	772, 1170, 1171, 1344, 1972, 1998, 2101
BssMI	GATC	8 cut(s)	15, 119, 220, 226, 591, 721, 1089, 2107
BssT1I	CCWWGG	4 cut(s)	772, 1344, 1972, 2101
Bst2UI	CCWGG	5 cut(s)	536, 1009, 1172, 1220, 2000
Bst4CI	ACNGT	8 cut(s)	102, 318, 793, 1099, 1246, 1516, 1657, 1766
Bst6I	CTCTTC	3 cut(s)	211, 555, 828
BstAFI	CTTAAG	1 cut(s)	707
BstAPI	GCANNNNNTGC	3 cut(s)	74, 674, 1151
BstAUI	TGTACA	2 cut(s)	318, 1228
BstC8I	GCNNGC	7 cut(s)	79, 165, 300, 666, 1147, 1410, 1536
BstDEI	CTNAG	4 cut(s)	959, 1137, 1590, 1934
BstDSI	CCRYGG	1 cut(s)	1344
BstF5I	GGATG	3 cut(s)	610, 2025, 2074
BstKTI	GATC	8 cut(s)	18, 122, 223, 229, 594, 724, 1092, 2110
BstMAI	GTCTC	3 cut(s)	170, 692, 2163
BstMBI	GATC	8 cut(s)	15, 119, 220, 226, 591, 721, 1089, 2107
BstNI	CCWGG	5 cut(s)	536, 1009, 1172, 1220, 2000
BstNSI	RCATGY	1 cut(s)	1149
BstSCI	CCNGG	6 cut(s)	534, 1007, 1170, 1218, 1566, 1998
BstSFI	CTRYAG	5 cut(s)	30, 252, 1872, 2030, 2220
BstSLI	GKGCMC	1 cut(s)	1549
BstV1I	GCAGC	5 cut(s)	289, 884, 1276, 1417, 1858
BstV2I	GAAGAC	3 cut(s)	537, 2184, 2205
BstX2I	RGATCY	2 cut(s)	15, 2107
BstYI	RGATCY	2 cut(s)	15, 2107
Bsu15I	ATCGAT	1 cut(s)	594
BsuI	GTATCC	1 cut(s)	1048
BsuRI	GGCC	9 cut(s)	106, 344, 1169, 1191, 1400, 1547, 1566, 2231, 2240
BsuTUI	ATCGAT	1 cut(s)	594
BtgI	CCRYGG	1 cut(s)	1344
BtsCI	GGATG	3 cut(s)	610, 2025, 2074
BtsI	GCAGTG	1 cut(s)	1692
BtsIMutI	CAGTG	7 cut(s)	107, 314, 798, 967, 1242, 1692, 2120
Cac8I	GCNNGC	7 cut(s)	79, 165, 300, 666, 1147, 1410, 1536
CciI	TCATGA	1 cut(s)	1371
Cfr13I	GGNCC	9 cut(s)	905, 976, 1168, 1190, 1399, 1545, 1546, 1565, 2229
ClaI	ATCGAT	1 cut(s)	594
CseI	GACGC	2 cut(s)	709, 1401
Csp6I	GTAC	6 cut(s)	319, 1229, 1636, 1837, 1846, 1921
CviQI	GTAC	6 cut(s)	319, 1229, 1636, 1837, 1846, 1921
DdeI	CTNAG	4 cut(s)	959, 1137, 1590, 1934
DpnI	GATC	8 cut(s)	17, 121, 222, 228, 593, 723, 1091, 2109
DpnII	GATC	8 cut(s)	15, 119, 220, 226, 591, 721, 1089, 2107
DraI	TTTAAA	1 cut(s)	2178
EaeI	YGGCCR	2 cut(s)	104, 2238
Eam1104I	CTCTTC	3 cut(s)	211, 555, 828
EarI	CTCTTC	3 cut(s)	211, 555, 828
Eco130I	CCWWGG	4 cut(s)	772, 1344, 1972, 2101
Eco24I	GRGCYC	1 cut(s)	1549
Eco47I	GGWCC	2 cut(s)	905, 976
Eco57I	CTGAAG	3 cut(s)	297, 432, 1091
Eco88I	CYCGRG	1 cut(s)	309
EcoO109I	RGGNCCY	4 cut(s)	905, 976, 1545, 1546
EcoRI	GAATTC	2 cut(s)	563, 1031
EcoRII	CCWGG	5 cut(s)	534, 1007, 1170, 1218, 1998
EcoT14I	CCWWGG	4 cut(s)	772, 1344, 1972, 2101
EcoT38I	GRGCYC	1 cut(s)	1549
ErhI	CCWWGG	4 cut(s)	772, 1344, 1972, 2101
Esp3I	CGTCTC	1 cut(s)	692
FalI	AAGNNNNNCTT	4 cut(s)	1437, 1469, 1518, 1550
FaqI	GGGAC	3 cut(s)	391, 644, 778
FauI	CCCGC	2 cut(s)	70, 1258
FauNDI	CATATG	1 cut(s)	1294
FbaI	TGATCA	1 cut(s)	721
Fnu4HI	GCNGC	6 cut(s)	303, 432, 873, 1290, 1406, 1872
FokI	GGATG	3 cut(s)	617, 2012, 2081
FriOI	GRGCYC	1 cut(s)	1549
Fsp4HI	GCNGC	6 cut(s)	303, 432, 873, 1290, 1406, 1872
FspBI	CTAG	1 cut(s)	2111
GluI	GCNGC	6 cut(s)	303, 432, 873, 1290, 1406, 1872
GsaI	CCCAGC	4 cut(s)	762, 1076, 1405, 1732
GsuI	CTGGAG	1 cut(s)	589
HaeIII	GGCC	9 cut(s)	106, 344, 1169, 1191, 1400, 1547, 1566, 2231, 2240
HapII	CCGG	2 cut(s)	107, 1568
HgaI	GACGC	2 cut(s)	709, 1401
HincII	GTYRAC	1 cut(s)	924
HindII	GTYRAC	1 cut(s)	924
HinfI	GANTC	9 cut(s)	178, 421, 632, 1271, 1390, 1699, 1861, 1944, 2216
HpaI	GTTAAC	1 cut(s)	924
HpaII	CCGG	2 cut(s)	107, 1568
HphI	GGTGA	4 cut(s)	131, 629, 1811, 2089
Hpy166II	GTNNAC	4 cut(s)	924, 1439, 1466, 1923
Hpy8I	GTNNAC	4 cut(s)	924, 1439, 1466, 1923
HpyAV	CCTTC	5 cut(s)	272, 918, 988, 1046, 1135
HpyCH4III	ACNGT	8 cut(s)	102, 318, 793, 1099, 1246, 1516, 1657, 1766
HpyCH4IV	ACGT	2 cut(s)	950, 1131
HpyF3I	CTNAG	4 cut(s)	959, 1137, 1590, 1934
HpySE526I	ACGT	2 cut(s)	950, 1131
Ksp22I	TGATCA	1 cut(s)	721
KspAI	GTTAAC	1 cut(s)	924
Kzo9I	GATC	8 cut(s)	15, 119, 220, 226, 591, 721, 1089, 2107
LguI	GCTCTTC	1 cut(s)	555
LmnI	GCTCC	3 cut(s)	364, 1213, 2023
Lsp1109I	GCAGC	5 cut(s)	289, 884, 1276, 1417, 1858
LweI	GCATC	4 cut(s)	28, 516, 1252, 1393
MaeI	CTAG	1 cut(s)	2111
MaeII	ACGT	2 cut(s)	950, 1131
MaeIII	GTNAC	4 cut(s)	9, 144, 1246, 1651
MalI	GATC	8 cut(s)	17, 121, 222, 228, 593, 723, 1091, 2109
MboI	GATC	8 cut(s)	15, 119, 220, 226, 591, 721, 1089, 2107
MflI	RGATCY	2 cut(s)	15, 2107
MhlI	GDGCHC	3 cut(s)	316, 1156, 1549
MlsI	TGGCCA	1 cut(s)	2240
MluNI	TGGCCA	1 cut(s)	2240
MlyI	GAGTC	3 cut(s)	172, 626, 1384
Mox20I	TGGCCA	1 cut(s)	2240
MroXI	GAANNNNTTC	1 cut(s)	1035
MscI	TGGCCA	1 cut(s)	2240
MseI	TTAA	6 cut(s)	708, 923, 968, 1280, 2177, 2211
MslI	CAYNNNNRTG	1 cut(s)	1856
Msp20I	TGGCCA	1 cut(s)	2240
MspA1I	CMGCKG	1 cut(s)	251
MspCI	CTTAAG	1 cut(s)	707
MspI	CCGG	2 cut(s)	107, 1568
MspR9I	CCNGG	6 cut(s)	536, 1009, 1172, 1220, 1568, 2000
MvaI	CCWGG	5 cut(s)	536, 1009, 1172, 1220, 2000
NciI	CCSGG	1 cut(s)	1568
NcoI	CCATGG	1 cut(s)	1344
NdeI	CATATG	1 cut(s)	1294
NdeII	GATC	8 cut(s)	15, 119, 220, 226, 591, 721, 1089, 2107
NlaIV	GGNNCC	5 cut(s)	540, 906, 978, 1546, 1547
NmuCI	GTSAC	1 cut(s)	1651
NspI	RCATGY	1 cut(s)	1149
PaeI	GCATGC	1 cut(s)	1149
PagI	TCATGA	1 cut(s)	1371
PasI	CCCWGGG	1 cut(s)	1171
PciSI	GCTCTTC	1 cut(s)	555
PdmI	GAANNNNTTC	1 cut(s)	1035
PfeI	GAWTC	6 cut(s)	421, 1271, 1699, 1861, 1944, 2216
PfoI	TCCNGGA	1 cut(s)	1218
PkrI	GCNGC	6 cut(s)	304, 433, 874, 1291, 1407, 1873
PleI	GAGTC	3 cut(s)	172, 626, 1384
PpsI	GAGTC	3 cut(s)	172, 626, 1384
PpuMI	RGGWCCY	2 cut(s)	905, 976
Psp1406I	AACGTT	1 cut(s)	1131
Psp5II	RGGWCCY	2 cut(s)	905, 976
Psp6I	CCWGG	5 cut(s)	534, 1007, 1170, 1218, 1998
PspFI	CCCAGC	4 cut(s)	758, 1072, 1401, 1728
PspGI	CCWGG	5 cut(s)	534, 1007, 1170, 1218, 1998
PspN4I	GGNNCC	5 cut(s)	540, 906, 978, 1546, 1547
PspOMI	GGGCCC	1 cut(s)	1545
PspPI	GGNCC	9 cut(s)	905, 976, 1168, 1190, 1399, 1545, 1546, 1565, 2229
PspPPI	RGGWCCY	2 cut(s)	905, 976
PstI	CTGCAG	3 cut(s)	1876, 2034, 2224
PsuI	RGATCY	2 cut(s)	15, 2107
PvuII	CAGCTG	1 cut(s)	251
RsaI	GTAC	6 cut(s)	320, 1230, 1637, 1838, 1847, 1922
RsaNI	GTAC	6 cut(s)	319, 1229, 1636, 1837, 1846, 1921
RseI	CAYNNNNRTG	1 cut(s)	1856
SapI	GCTCTTC	1 cut(s)	555
SaqAI	TTAA	6 cut(s)	708, 923, 968, 1280, 2177, 2211
SatI	GCNGC	6 cut(s)	303, 432, 873, 1290, 1406, 1872
Sau3AI	GATC	8 cut(s)	15, 119, 220, 226, 591, 721, 1089, 2107
Sau96I	GGNCC	9 cut(s)	905, 976, 1168, 1190, 1399, 1545, 1546, 1565, 2229
ScaI	AGTACT	1 cut(s)	1838
SchI	GAGTC	3 cut(s)	172, 626, 1384
ScrFI	CCNGG	6 cut(s)	536, 1009, 1172, 1220, 1568, 2000
SduI	GDGCHC	3 cut(s)	316, 1156, 1549
SfaNI	GCATC	4 cut(s)	28, 516, 1252, 1393
SfcI	CTRYAG	5 cut(s)	30, 252, 1872, 2030, 2220
SfiI	GGCCNNNNNGGCC	1 cut(s)	2237
SinI	GGWCC	2 cut(s)	905, 976
SmiMI	CAYNNNNRTG	1 cut(s)	1856
SmlI	CTYRAG	5 cut(s)	57, 707, 1394, 1486, 1736
SmoI	CTYRAG	5 cut(s)	57, 707, 1394, 1486, 1736
SphI	GCATGC	1 cut(s)	1149
SsiI	CCGC	4 cut(s)	77, 431, 1149, 1265
SspI	AATATT	2 cut(s)	136, 748
SspMI	CTAG	1 cut(s)	2111
StyD4I	CCNGG	6 cut(s)	534, 1007, 1170, 1218, 1566, 1998
StyI	CCWWGG	4 cut(s)	772, 1344, 1972, 2101
TaaI	ACNGT	8 cut(s)	102, 318, 793, 1099, 1246, 1516, 1657, 1766
TaiI	ACGT	2 cut(s)	953, 1134
TaqI	TCGA	6 cut(s)	424, 575, 594, 831, 1325, 1608
TatI	WGTACW	4 cut(s)	318, 1228, 1836, 1920
TauI	GCSGC	1 cut(s)	434
TfiI	GAWTC	6 cut(s)	421, 1271, 1699, 1861, 1944, 2216
Tru1I	TTAA	6 cut(s)	708, 923, 968, 1280, 2177, 2211
Tru9I	TTAA	6 cut(s)	708, 923, 968, 1280, 2177, 2211
TscAI	CASTG	7 cut(s)	107, 321, 798, 967, 1249, 1692, 2127
TseFI	GTSAC	1 cut(s)	1651
TseI	GCWGC	5 cut(s)	302, 872, 1289, 1405, 1871
Tsp45I	GTSAC	1 cut(s)	1651
TspGWI	ACGGA	3 cut(s)	633, 1759, 1956
TspRI	CASTG	7 cut(s)	107, 321, 798, 967, 1249, 1692, 2127
Vha464I	CTTAAG	1 cut(s)	707
VpaK11BI	GGWCC	2 cut(s)	905, 976
XapI	RAATTY	4 cut(s)	563, 1023, 1031, 1624
XceI	RCATGY	1 cut(s)	1149
XmnI	GAANNNNTTC	1 cut(s)	1035
XspI	CTAG	1 cut(s)	2111
ZrmI	AGTACT	1 cut(s)	1838

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.