Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0010033

Physical Location & Seq

Genomic Coordinates Forward (+)

7863153 .. 7866500

Gene Structure 3348 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g13920.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGAGCGGCGGTGCCACTACGAGGTGCTGGGCCTGGACCGCGGCTGCGCCGCCGACGAGATCAAATCGGCCTACCGTAAACTCGCCCTCCAGCGCCACCCCGACAAGCTGGTCCCCACCGGCGTCTCCCAGGCCGACGCCAACGCCCAGTTCCAGGAGCTCGGCCACGCCTACGAGGTCCTCTCCGATCCCAAAGAGCGCGCCTGGTACGACTCCCACCGCTCCCAGATCCTCTTCGCCGATCCCTCCGCCGCCAACTCCGTCCCCGACTCCGTCATCCCCAACCTCTTCTCCTTCTTCTCCACCACCGTCTTCTCCGGCTACTCCGACTCCGGCAAGGGATTCTACAAAGTCTACTCCGACGTCTTCACCAAAATCTACTCCAACGAGCTCAGCTTCGCCCGGAAGCTAGGGCTCGGGATCGACGCCGTGAGGGAGGCGCCGGCGCTGGGGAATCTGAAAAGCGACTACTCTCAGGTGACGGCGTTTTACAACTACTGGCTAGGGTTTTGCACGGTGATGGATTTCTGCTGGGTGGACCAGTATGACGTCATGGCGGGGCAGAATCGGAAGCTGAGGCGGTTGATGGAGGAGGATAACAAGAAGCAGAGGAAGAAGGCGAAGAGGGAGTACAACGACACCGTTCGGGGGCTGGCGGAGTTTGCGAAGAAGAGGGATAAGAGGGTGATGGATATGATGGTGAAGAGGGAGGAGGAGAGGAAGAGGAAGAAGAAGGAGGAGGTGGAGAAGAAGAAGAGGATGGAGAGGGAGAAGTTGGAGAGAGCTATGGCGTTTGAGGAGCCGGAGTGGGCGAAAGCGGAGGAGGACGACGAGGAGGAGGTTGATGAGGAGGAGGAGGAGGAGAGGAAGAGGAATGAGCTGTATTGCGTGGTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAGTGGAAGAATCACGAGCAGTCCAAGAAGCATAAGGATAAGGTTGCGGAGTTTAGGGAGTCGATTGGGGATGAGGAGGAGGTGGAGGATTTAGGTGAGCGAATGAGGGAGGGTTTGGAGATTGGGGAGGAGGGAGAGAGTGGCGGTGAGGATGAGTTTCATGATTTCAGTGATGAAAAACTTGACAAGGACGATGATGATGATGGTGATGATGATGAGATGGAACTTCTTCAAGCAATGGCGGCCAGGCACAAGAGTAGGGAAGAGCTTGACGACGACGATGATGATGAGGATGACGATGAAATGGAGCTTCTAAAGGCAATGGCAGCCAGGCACAAGAGTAGGGAAAATGTTGGCGAGGCAGTTGGAGTTGATGACGGTGGTAGTGAGAGTGATGATGAAATGGATGTTCTTGAAGCAATGGTGGCCGGGCGAAAGAGCAGGAAAAATGCAGCTTCAAAGGTTGAGGTTGAGGATCCCTTGGTGACCCGTGTTCATGGGGACAATGATATCAATGGTGTAGAGTCCGTTCCTATGGAATATGAGAATCGAAAGCCTCCTAGAAGGAAAGCCAAGAGTAAGAAGAGTGGTGGAGAAACAAAAAGAGTTGATATGAATGATATTAGTAATGATCAAAGTGAGGCAGGTGAAAATGATAATTCTGATATAAAGGAATCCACATCTGATTCTATGGCGGAAAAGGAAAATGCGAGTAGTAACGATAAACAGGATAATCAAATAGCCAGAAAGAAGAAATCTTCAAAACAGACTGTTGAGAAGAAGAAAGAGAATGTGAAGAACGAAGCCAACGGCAAATCAAAGAGCTCTTCCAAAGGGAAGAAAGCTAAGGCAACATCAAAGAACTCTAGCAATGCATGTGACACATGCGGAGAGGAGTTTGGATCAAGGAACCAATTACATAAGCATTTAGGTGACACTGGACATGCTTCACTGAAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ zf-C2H2_jaz

Protein Analysis

628

Amino Acids

71.54

Weight (kDa)

5.11

Isoelectric Point (pI)

42.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	6 - 71	8.4e-21	DnaJ domain
ZUO1-like_ZHD	PF21884	121 - 229	2.4e-22	Zuotin-like, zuotin homology domain
zf-C2H2_jaz	PF12171	294 - 319	1.6e-10	Zinc-finger double-stranded RNA-binding
zf-met	PF12874	294 - 318	1.8e-08	Zinc-finger of C2H2 type

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010033)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74250
fragaria_vesca	FvH4_5g13920
malus_domestica	MD06G1202400.v1.1 MD14G1211500.v1.1
prunus_persica	Prupe.5G204600_v2.0.a1 Prupe.5G204600_v2.0.a1 Prupe.5G204600_v2.0.a1
pyrus_communis	pycom06g17840 pycom14g17510
rosa_chinensis	RchiOBHm_Chr7g0183041
rosa_laevigata	RLG00000005085
rosa_multiflora	Rmu_sc0000014.1_g000005 Rmu_sc0021698.1_g000001 Rmu_ssc0000111.1_g000001
rosa_roxburghii	Rroxscaffold_3G00270820
rosa_rugosa	Rorug06G0452000
rosa_samantha	Rh7AG055500 Rh7BG054900 Rh7CG056200 Rh7DG055000
rosa_wichuraiana	Rw7G004510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1556
AasI	GACNNNNNNGTC	1 cut(s)	110
AatII	GACGTC	2 cut(s)	366, 552
Acc36I	ACCTGC	1 cut(s)	1556
AccB1I	GGYRCC	2 cut(s)	12, 439
AccBSI	CCGCTC	2 cut(s)	7, 222
AccI	GTMKAC	1 cut(s)	354
AccII	CGCG	2 cut(s)	42, 201
AclWI	GGATC	7 cut(s)	182, 223, 236, 428, 1391, 1404, 1831
AcoI	YGGCCR	3 cut(s)	163, 1164, 1347
AcyI	GRCGYC	6 cut(s)	123, 138, 363, 426, 440, 549
AfaI	GTAC	2 cut(s)	209, 632
AfiI	CCNNNNNNNGG	4 cut(s)	22, 154, 449, 648
AgsI	TTSAA	4 cut(s)	1154, 1337, 1380, 1683
AjnI	CCWGG	6 cut(s)	33, 129, 153, 203, 1166, 1250
AjuI	GAANNNNNNNTTGG	2 cut(s)	134, 166
Alw21I	GWGCWC	3 cut(s)	162, 393, 1748
Alw26I	GTCTC	1 cut(s)	130
AlwI	GGATC	7 cut(s)	182, 223, 236, 428, 1391, 1404, 1831
Ama87I	CYCGRG	1 cut(s)	416
AoxI	GGCC	6 cut(s)	31, 69, 132, 163, 1164, 1347
ApeKI	GCWGC	3 cut(s)	45, 1247, 1373
Asp700I	GAANNNNTTC	1 cut(s)	1149
AspLEI	GCGC	6 cut(s)	50, 96, 201, 203, 442, 448
AspS9I	GGNCC	5 cut(s)	31, 37, 112, 178, 538
AsuC2I	CCSGG	2 cut(s)	403, 1351
AvaI	CYCGRG	1 cut(s)	416
AvaII	GGWCC	4 cut(s)	37, 112, 178, 538
BamHI	GGATCC	1 cut(s)	1396
BanI	GGYRCC	2 cut(s)	12, 439
BanII	GRGCYC	4 cut(s)	162, 393, 417, 1748
BarI	GAAGNNNNNNTAC	2 cut(s)	614, 646
BauI	CACGAG	1 cut(s)	935
BbsI	GAAGAC	2 cut(s)	304, 358
Bbv12I	GWGCWC	3 cut(s)	162, 393, 1748
BbvCI	CCTCAGC	1 cut(s)	575
BbvI	GCAGC	3 cut(s)	32, 1259, 1385
BccI	CCATC	7 cut(s)	514, 580, 682, 691, 754, 1118, 1135
BceAI	ACGGC	3 cut(s)	413, 498, 1747
BciT130I	CCWGG	6 cut(s)	35, 131, 155, 205, 1168, 1252
BclI	TGATCA	1 cut(s)	1552
BcnI	CCSGG	2 cut(s)	403, 1351
BcoDI	GTCTC	1 cut(s)	130
BfaI	CTAG	4 cut(s)	410, 503, 1482, 1788
BfoI	RGCGCY	3 cut(s)	97, 443, 449
BfuAI	ACCTGC	1 cut(s)	1556
BisI	GCNGC	8 cut(s)	8, 43, 46, 51, 252, 1164, 1248, 1374
BlpI	GCTNAGC	1 cut(s)	392
BlsI	GCNGC	8 cut(s)	9, 44, 47, 52, 253, 1165, 1249, 1375
Bme1390I	CCNGG	8 cut(s)	35, 131, 155, 205, 403, 1168, 1252, 1351
Bme18I	GGWCC	4 cut(s)	37, 112, 178, 538
BmeT110I	CYCGRG	1 cut(s)	416
BmgT120I	GGNCC	5 cut(s)	31, 37, 112, 178, 538
BmiI	GGNNCC	6 cut(s)	14, 114, 441, 801, 1398, 1832
BmrFI	CCNGG	8 cut(s)	35, 131, 155, 205, 403, 1168, 1252, 1351
BmrI	ACTGGG	1 cut(s)	142
BmuI	ACTGGG	1 cut(s)	142
BpiI	GAAGAC	2 cut(s)	304, 358
BplI	GAGNNNNNCTC	2 cut(s)	167, 199
BpmI	CTGGAG	1 cut(s)	74
Bpu10I	CCTNAGC	2 cut(s)	575, 1767
Bpu1102I	GCTNAGC	1 cut(s)	392
BpuMI	CCSGG	2 cut(s)	403, 1351
BsaHI	GRCGYC	6 cut(s)	123, 138, 363, 426, 440, 549
BsaJI	CCNNGG	3 cut(s)	40, 129, 1401
BsaXI	ACNNNNNCTCC	9 cut(s)	26, 72, 102, 275, 305, 314, 344, 791, 821
Bsc4I	CCNNNNNNNGG	4 cut(s)	22, 154, 449, 648
Bse118I	RCCGGY	2 cut(s)	119, 442
Bse1I	ACTGG	4 cut(s)	148, 503, 541, 1864
Bse3DI	GCAATG	4 cut(s)	1164, 1248, 1347, 1798
BseBI	CCWGG	6 cut(s)	35, 131, 155, 205, 1168, 1252
BseDI	CCNNGG	3 cut(s)	40, 129, 1401
BseGI	GGATG	6 cut(s)	276, 765, 997, 1078, 1219, 1333
BseLI	CCNNNNNNNGG	4 cut(s)	22, 154, 449, 648
BseMI	GCAATG	4 cut(s)	1164, 1248, 1347, 1798
BseMII	CTCAG	3 cut(s)	406, 488, 566
BseNI	ACTGG	4 cut(s)	148, 503, 541, 1864
BsePI	GCGCGC	1 cut(s)	199
BseXI	GCAGC	3 cut(s)	32, 1259, 1385
BseYI	CCCAGC	3 cut(s)	28, 448, 531
Bsh1236I	CGCG	2 cut(s)	42, 201
BshFI	GGCC	6 cut(s)	33, 71, 134, 165, 1166, 1349
BshNI	GGYRCC	2 cut(s)	12, 439
BsiHKAI	GWGCWC	3 cut(s)	162, 393, 1748
BsiHKCI	CYCGRG	1 cut(s)	416
BsiSI	CCGG	7 cut(s)	120, 318, 333, 403, 443, 803, 1350
BslFI	GGGAC	3 cut(s)	98, 248, 1436
BslI	CCNNNNNNNGG	4 cut(s)	22, 154, 449, 648
BsmAI	GTCTC	1 cut(s)	130
BsmBI	CGTCTC	1 cut(s)	130
BsmFI	GGGAC	3 cut(s)	98, 248, 1436
BsnI	GGCC	6 cut(s)	33, 71, 134, 165, 1166, 1349
BsoBI	CYCGRG	1 cut(s)	416
Bsp1286I	GDGCHC	4 cut(s)	162, 393, 417, 1748
Bsp143I	GATC	8 cut(s)	60, 187, 228, 241, 420, 1396, 1552, 1823
Bsp1720I	GCTNAGC	1 cut(s)	392
BspANI	GGCC	6 cut(s)	33, 71, 134, 165, 1166, 1349
BspCNI	CTCAG	3 cut(s)	405, 487, 567
BspFNI	CGCG	2 cut(s)	42, 201
BspHI	TCATGA	1 cut(s)	1081
BspLI	GGNNCC	6 cut(s)	14, 114, 441, 801, 1398, 1832
BspMI	ACCTGC	1 cut(s)	1556
BspPI	GGATC	7 cut(s)	182, 223, 236, 428, 1391, 1404, 1831
BspQI	GCTCTTC	2 cut(s)	1179, 1753
BspT107I	GGYRCC	2 cut(s)	12, 439
BsrBI	CCGCTC	2 cut(s)	7, 222
BsrDI	GCAATG	4 cut(s)	1164, 1248, 1347, 1798
BsrFI	RCCGGY	2 cut(s)	119, 442
BsrI	ACTGG	4 cut(s)	148, 503, 541, 1864
BssAI	RCCGGY	2 cut(s)	119, 442
BssECI	CCNNGG	3 cut(s)	40, 129, 1401
BssHII	GCGCGC	1 cut(s)	199
BssMI	GATC	8 cut(s)	60, 187, 228, 241, 420, 1396, 1552, 1823
BssNI	GRCGYC	6 cut(s)	123, 138, 363, 426, 440, 549
BssSI	CACGAG	1 cut(s)	935
BssT1I	CCWWGG	1 cut(s)	1401
Bst2BI	CACGAG	1 cut(s)	935
Bst2UI	CCWGG	6 cut(s)	35, 131, 155, 205, 1168, 1252
Bst4CI	ACNGT	6 cut(s)	77, 310, 517, 643, 1301, 1693
BstACI	GRCGYC	6 cut(s)	123, 138, 363, 426, 440, 549
BstC8I	GCNNGC	3 cut(s)	201, 444, 654
BstDEI	CTNAG	4 cut(s)	392, 474, 575, 1767
BstDSI	CCRYGG	1 cut(s)	40
BstEII	GGTNACC	1 cut(s)	1405
BstF5I	GGATG	6 cut(s)	276, 765, 997, 1078, 1219, 1333
BstFNI	CGCG	2 cut(s)	42, 201
BstH2I	RGCGCY	3 cut(s)	97, 443, 449
BstHHI	GCGC	6 cut(s)	50, 96, 201, 203, 442, 448
BstKTI	GATC	8 cut(s)	63, 190, 231, 244, 423, 1399, 1555, 1826
BstMAI	GTCTC	1 cut(s)	130
BstMBI	GATC	8 cut(s)	60, 187, 228, 241, 420, 1396, 1552, 1823
BstMWI	GCNNNNNNNGC	5 cut(s)	39, 662, 1163, 1247, 1346
BstNI	CCWGG	6 cut(s)	35, 131, 155, 205, 1168, 1252
BstNSI	RCATGY	3 cut(s)	1800, 1809, 1868
BstPI	GGTNACC	1 cut(s)	1405
BstSCI	CCNGG	8 cut(s)	33, 129, 153, 203, 401, 1166, 1250, 1349
BstUI	CGCG	2 cut(s)	42, 201
BstV1I	GCAGC	3 cut(s)	32, 1259, 1385
BstV2I	GAAGAC	2 cut(s)	304, 358
BstX2I	RGATCY	2 cut(s)	228, 1396
BstYI	RGATCY	2 cut(s)	228, 1396
BsuRI	GGCC	6 cut(s)	33, 71, 134, 165, 1166, 1349
BtgI	CCRYGG	1 cut(s)	40
BtsCI	GGATG	6 cut(s)	276, 765, 997, 1078, 1219, 1333
BtsI	GCAGTG	1 cut(s)	929
BtsIMutI	CAGTG	4 cut(s)	929, 1096, 1857, 1871
BveI	ACCTGC	1 cut(s)	1556
Cac8I	GCNNGC	3 cut(s)	201, 444, 654
CciI	TCATGA	1 cut(s)	1081
CfoI	GCGC	6 cut(s)	50, 96, 201, 203, 442, 448
Cfr10I	RCCGGY	2 cut(s)	119, 442
Cfr13I	GGNCC	5 cut(s)	31, 37, 112, 178, 538
Cfr42I	CCGCGG	1 cut(s)	43
CseI	GACGC	3 cut(s)	112, 146, 434
Csp6I	GTAC	2 cut(s)	208, 631
CviAII	CATG	6 cut(s)	553, 1082, 1418, 1797, 1806, 1865
CviQI	GTAC	2 cut(s)	208, 631
DdeI	CTNAG	4 cut(s)	392, 474, 575, 1767
DinI	GGCGCC	1 cut(s)	441
DpnI	GATC	8 cut(s)	62, 189, 230, 243, 422, 1398, 1554, 1825
DpnII	GATC	8 cut(s)	60, 187, 228, 241, 420, 1396, 1552, 1823
DrdI	GACNNNNNNGTC	1 cut(s)	110
DseDI	GACNNNNNNGTC	1 cut(s)	110
EaeI	YGGCCR	3 cut(s)	163, 1164, 1347
EciI	GGCGGA	3 cut(s)	238, 671, 1631
Ecl136II	GAGCTC	3 cut(s)	160, 391, 1746
Eco130I	CCWWGG	1 cut(s)	1401
Eco24I	GRGCYC	4 cut(s)	162, 393, 417, 1748
Eco32I	GATATC	1 cut(s)	1432
Eco47I	GGWCC	4 cut(s)	37, 112, 178, 538
Eco53kI	GAGCTC	3 cut(s)	160, 391, 1746
Eco88I	CYCGRG	1 cut(s)	416
Eco91I	GGTNACC	1 cut(s)	1405
EcoICRI	GAGCTC	3 cut(s)	160, 391, 1746
EcoO109I	RGGNCCY	1 cut(s)	178
EcoO65I	GGTNACC	1 cut(s)	1405
EcoRII	CCWGG	6 cut(s)	33, 129, 153, 203, 1166, 1250
EcoRV	GATATC	1 cut(s)	1432
EcoT14I	CCWWGG	1 cut(s)	1401
EcoT22I	ATGCAT	1 cut(s)	1798
EcoT38I	GRGCYC	4 cut(s)	162, 393, 417, 1748
EgeI	GGCGCC	1 cut(s)	441
EheI	GGCGCC	1 cut(s)	441
ErhI	CCWWGG	1 cut(s)	1401
Esp3I	CGTCTC	1 cut(s)	130
FaeI	CATG	6 cut(s)	556, 1085, 1421, 1800, 1809, 1868
FaqI	GGGAC	3 cut(s)	98, 248, 1436
FatI	CATG	6 cut(s)	552, 1081, 1417, 1796, 1805, 1864
FauI	CCCGC	1 cut(s)	550
FbaI	TGATCA	1 cut(s)	1552
FblI	GTMKAC	1 cut(s)	354
Fnu4HI	GCNGC	8 cut(s)	8, 43, 46, 51, 252, 1164, 1248, 1374
FokI	GGATG	6 cut(s)	263, 772, 1004, 1085, 1226, 1340
FriOI	GRGCYC	4 cut(s)	162, 393, 417, 1748
Fsp4HI	GCNGC	8 cut(s)	8, 43, 46, 51, 252, 1164, 1248, 1374
FspBI	CTAG	4 cut(s)	410, 503, 1482, 1788
GlaI	GCGC	6 cut(s)	49, 95, 200, 202, 441, 447
GluI	GCNGC	8 cut(s)	8, 43, 46, 51, 252, 1164, 1248, 1374
GsaI	CCCAGC	3 cut(s)	32, 452, 535
GsuI	CTGGAG	1 cut(s)	74
HaeII	RGCGCY	3 cut(s)	97, 443, 449
HaeIII	GGCC	6 cut(s)	33, 71, 134, 165, 1166, 1349
HapII	CCGG	7 cut(s)	120, 318, 333, 403, 443, 803, 1350
HgaI	GACGC	3 cut(s)	112, 146, 434
HhaI	GCGC	6 cut(s)	50, 96, 201, 203, 442, 448
Hin1I	GRCGYC	6 cut(s)	123, 138, 363, 426, 440, 549
Hin1II	CATG	6 cut(s)	556, 1085, 1421, 1800, 1809, 1868
Hin6I	GCGC	6 cut(s)	48, 94, 199, 201, 440, 446
HinP1I	GCGC	6 cut(s)	48, 94, 199, 201, 440, 446
HpaII	CCGG	7 cut(s)	120, 318, 333, 403, 443, 803, 1350
Hpy166II	GTNNAC	3 cut(s)	80, 355, 538
Hpy188I	TCNGA	7 cut(s)	187, 328, 361, 459, 570, 1585, 1606
Hpy188III	TCNNGA	4 cut(s)	418, 935, 1082, 1334
Hpy8I	GTNNAC	3 cut(s)	80, 355, 538
Hpy99I	CGWCG	7 cut(s)	59, 140, 365, 428, 833, 1199, 1202
HpyAV	CCTTC	4 cut(s)	304, 610, 727, 1479
HpyCH4III	ACNGT	6 cut(s)	77, 310, 517, 643, 1301, 1693
HpyCH4IV	ACGT	2 cut(s)	363, 549
HpyCH4V	TGCA	3 cut(s)	513, 1373, 1796
HpyF10VI	GCNNNNNNNGC	5 cut(s)	39, 662, 1163, 1247, 1346
HpyF3I	CTNAG	4 cut(s)	392, 474, 575, 1767
HpySE526I	ACGT	2 cut(s)	363, 549
Hsp92I	GRCGYC	6 cut(s)	123, 138, 363, 426, 440, 549
Hsp92II	CATG	6 cut(s)	556, 1085, 1421, 1800, 1809, 1868
HspAI	GCGC	6 cut(s)	48, 94, 199, 201, 440, 446
KasI	GGCGCC	1 cut(s)	439
KroI	GCCGGC	1 cut(s)	442
KroNI	GCCGGC	1 cut(s)	444
Ksp22I	TGATCA	1 cut(s)	1552
KspI	CCGCGG	1 cut(s)	43
Kzo9I	GATC	8 cut(s)	60, 187, 228, 241, 420, 1396, 1552, 1823
LguI	GCTCTTC	2 cut(s)	1179, 1753
LmnI	GCTCC	5 cut(s)	4, 157, 227, 799, 1228
Lsp1109I	GCAGC	3 cut(s)	32, 1259, 1385
MaeI	CTAG	4 cut(s)	410, 503, 1482, 1788
MaeII	ACGT	2 cut(s)	363, 549
MaeIII	GTNAC	5 cut(s)	478, 1405, 1637, 1799, 1853
MalI	GATC	8 cut(s)	62, 189, 230, 243, 422, 1398, 1554, 1825
MbiI	CCGCTC	2 cut(s)	7, 222
MboI	GATC	8 cut(s)	60, 187, 228, 241, 420, 1396, 1552, 1823
MflI	RGATCY	2 cut(s)	228, 1396
MhlI	GDGCHC	4 cut(s)	162, 393, 417, 1748
MluCI	AATT	2 cut(s)	1579, 1835
Mly113I	GGCGCC	1 cut(s)	440
MlyI	GAGTC	5 cut(s)	206, 263, 323, 989, 1454
MmeI	TCCRAC	5 cut(s)	351, 384, 408, 756, 1267
Mph1103I	ATGCAT	1 cut(s)	1798
MreI	CGCCGGCG	1 cut(s)	442
MroNI	GCCGGC	1 cut(s)	442
MroXI	GAANNNNTTC	1 cut(s)	1149
MseI	TTAA	1 cut(s)	909
MslI	CAYNNNNRTG	2 cut(s)	518, 1851
MspA1I	CMGCKG	1 cut(s)	42
MspI	CCGG	7 cut(s)	120, 318, 333, 403, 443, 803, 1350
MspR9I	CCNGG	8 cut(s)	35, 131, 155, 205, 403, 1168, 1252, 1351
MvaI	CCWGG	6 cut(s)	35, 131, 155, 205, 1168, 1252
MvnI	CGCG	2 cut(s)	42, 201
MwoI	GCNNNNNNNGC	5 cut(s)	39, 662, 1163, 1247, 1346
NaeI	GCCGGC	1 cut(s)	444
NarI	GGCGCC	1 cut(s)	440
NciI	CCSGG	2 cut(s)	403, 1351
NdeII	GATC	8 cut(s)	60, 187, 228, 241, 420, 1396, 1552, 1823
NgoMIV	GCCGGC	1 cut(s)	442
NlaIII	CATG	6 cut(s)	556, 1085, 1421, 1800, 1809, 1868
NlaIV	GGNNCC	6 cut(s)	14, 114, 441, 801, 1398, 1832
NmeAIII	GCCGAG	1 cut(s)	141
NmuCI	GTSAC	4 cut(s)	478, 1405, 1799, 1853
NsiI	ATGCAT	1 cut(s)	1798
NspI	RCATGY	3 cut(s)	1800, 1809, 1868
PagI	TCATGA	1 cut(s)	1081
PaqCI	CACCTGC	1 cut(s)	1556
PauI	GCGCGC	1 cut(s)	199
PciSI	GCTCTTC	2 cut(s)	1179, 1753
PdiI	GCCGGC	1 cut(s)	444
PdmI	GAANNNNTTC	1 cut(s)	1149
PfeI	GAWTC	7 cut(s)	342, 454, 565, 931, 1468, 1595, 1607
PflFI	GACNNNGTC	1 cut(s)	272
PfoI	TCCNGGA	1 cut(s)	153
PkrI	GCNGC	8 cut(s)	9, 44, 47, 52, 253, 1165, 1249, 1375
PleI	GAGTC	5 cut(s)	206, 263, 323, 988, 1453
PluTI	GGCGCC	1 cut(s)	443
PpsI	GAGTC	5 cut(s)	206, 263, 323, 988, 1453
PpuMI	RGGWCCY	1 cut(s)	178
Psp124BI	GAGCTC	3 cut(s)	162, 393, 1748
Psp5II	RGGWCCY	1 cut(s)	178
Psp6I	CCWGG	6 cut(s)	33, 129, 153, 203, 1166, 1250
PspEI	GGTNACC	1 cut(s)	1405
PspFI	CCCAGC	3 cut(s)	28, 448, 531
PspGI	CCWGG	6 cut(s)	33, 129, 153, 203, 1166, 1250
PspN4I	GGNNCC	6 cut(s)	14, 114, 441, 801, 1398, 1832
PspPI	GGNCC	5 cut(s)	31, 37, 112, 178, 538
PspPPI	RGGWCCY	1 cut(s)	178
PsrI	GAACNNNNNNTAC	2 cut(s)	1434, 1466
PsuI	RGATCY	2 cut(s)	228, 1396
PsyI	GACNNNGTC	1 cut(s)	272
PteI	GCGCGC	1 cut(s)	199
RsaI	GTAC	2 cut(s)	209, 632
RsaNI	GTAC	2 cut(s)	208, 631
RseI	CAYNNNNRTG	2 cut(s)	518, 1851
SacI	GAGCTC	3 cut(s)	162, 393, 1748
SacII	CCGCGG	1 cut(s)	43
SapI	GCTCTTC	2 cut(s)	1179, 1753
SaqAI	TTAA	1 cut(s)	909
SatI	GCNGC	8 cut(s)	8, 43, 46, 51, 252, 1164, 1248, 1374
Sau3AI	GATC	8 cut(s)	60, 187, 228, 241, 420, 1396, 1552, 1823
Sau96I	GGNCC	5 cut(s)	31, 37, 112, 178, 538
SchI	GAGTC	5 cut(s)	206, 263, 323, 989, 1454
ScrFI	CCNGG	8 cut(s)	35, 131, 155, 205, 403, 1168, 1252, 1351
SduI	GDGCHC	4 cut(s)	162, 393, 417, 1748
SfoI	GGCGCC	1 cut(s)	441
Sfr303I	CCGCGG	1 cut(s)	43
SgrAI	CRCCGGYG	2 cut(s)	119, 442
SgrBI	CCGCGG	1 cut(s)	43
SinI	GGWCC	4 cut(s)	37, 112, 178, 538
SmiMI	CAYNNNNRTG	2 cut(s)	518, 1851
Sse9I	AATT	2 cut(s)	1579, 1835
SspDI	GGCGCC	1 cut(s)	439
SspMI	CTAG	4 cut(s)	410, 503, 1482, 1788
SstI	GAGCTC	3 cut(s)	162, 393, 1748
StyD4I	CCNGG	8 cut(s)	33, 129, 153, 203, 401, 1166, 1250, 1349
StyI	CCWWGG	1 cut(s)	1401
TaaI	ACNGT	6 cut(s)	77, 310, 517, 643, 1301, 1693
TaiI	ACGT	2 cut(s)	366, 552
TaqI	TCGA	3 cut(s)	423, 983, 1471
TasI	AATT	2 cut(s)	1579, 1835
TatI	WGTACW	1 cut(s)	630
TauI	GCSGC	5 cut(s)	10, 45, 53, 254, 1166
TfiI	GAWTC	7 cut(s)	342, 454, 565, 931, 1468, 1595, 1607
Tru1I	TTAA	1 cut(s)	909
Tru9I	TTAA	1 cut(s)	909
TscAI	CASTG	4 cut(s)	929, 1096, 1864, 1878
TseFI	GTSAC	4 cut(s)	478, 1405, 1799, 1853
TseI	GCWGC	3 cut(s)	45, 1247, 1373
Tsp45I	GTSAC	4 cut(s)	478, 1405, 1799, 1853
TspDTI	ATGAA	6 cut(s)	1070, 1110, 1236, 1335, 1406, 1550
TspGWI	ACGGA	3 cut(s)	250, 262, 1438
TspRI	CASTG	4 cut(s)	929, 1096, 1864, 1878
Tth111I	GACNNNGTC	1 cut(s)	272
VpaK11BI	GGWCC	4 cut(s)	37, 112, 178, 538
XceI	RCATGY	3 cut(s)	1800, 1809, 1868
XmiI	GTMKAC	1 cut(s)	354
XmnI	GAANNNNTTC	1 cut(s)	1149
XspI	CTAG	4 cut(s)	410, 503, 1482, 1788
ZraI	GACGTC	2 cut(s)	364, 550
Zsp2I	ATGCAT	1 cut(s)	1798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.