Rh7DG055000

dnaJ homolog subfamily C member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0010033
Physical Location & Seq
Reverse (-)
4277574 .. 4281172
3599 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG055000.1

Sequence Viewer

Length: 2028 bp
ATGGAGCGGCGGTGCCACTACGAGGTGCTCGGCGTCGACCGCGGCTGCACCGCCGACGAGATCAAGTCGGCGTACCGGAAACTCGCCCTGCAGCGCCACCCCGACAAGCTCATCCCCACCGGCGTCTCCCAGGCCGACGCCAACGCCCAGTTCCAGGAGCTCGGCCACGCCTACGAGGTCCTCTCCGACCCGAAGGAGCGAGCCTGGTACGACTCCCACCGCTCCCAGATCCTCTTCGCCGATCCCTCCGCCGCCAACTCCGTCCCCGACTCCGTCATCCCCAACCTCTTCAGCTTCTTCTCCACCACCGTCTTCTCCGGCTACTCCGACTCCGGCAAGGGCTTCTACAAGGTCTACGCCGACGTCTTCAATAAAATCTACTCGAACGAGCTGAGTTTCGCGAGGAAGTTAGGGTTAGGGATTGACGCGGTGAGGGAGGCTCCGGCGTTGGGGAATTTGAAGAGCGATTATGCTCAGGTGACGGCGTTTTATGGCTACTGGCTAGGTTTTTGTACGGTGATGGATTTCTGCTGGGTGGATCAGTATGACGTCATGGCGGGGCCGAATCGGAAGGTGAGGAGGTTGATGGAGGAGGATAATAAGAAGCAGAGGAAGAAGGCTAAGAGAGAGTATAATGACACTGTGCGGGGGTTGGCGGAGTTTGTGAAGAAGAGGGATAAGAGGGTGATGGATATGATGGTGAAGAGGGAGGAGGAGAGGGAGAGGAAGAAGAAGGAGGAGAGGGAGAGAAAGAAGAAGATGGACAAGGAGAAACTGGAGAGGGCTATGGCGTATGAGGAGCCGGAGTGGGCGAAAGCGGTCGAGGAGGAAGAGGAAGGGGATGACGAGGAGGAGGAGGAGGAGAGGAAGAGGAATGAGTTGTATTGTGTGGTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAGTGGAAGAATCATGAGCAGTCAAAGAAGCATAAGGATAAGATTGCGGAGTTCAGGGAGTCGATTGGGGATGAGGAGCTTGATGAAGAGGAAGTGGATGATTTAGGTGACCAAATGAGGGAGGGTTTGGAGATTGGGGAGGAGGATGATGGGGCTGGAGTGAGTGCCGGCGACGATGAGTTTTATGATTTTGGTGATGAAATTCTGACGGAAAAGCTTGATGATGATGATGAGGATGATAATGGTGGTGGTGATGATGATGATGAAATGGAACTTCTTCAAGCAATGGCGGCCAGGCACAAGAGTAGGGAAAAGCTTGATGCTGATGCTGATGCTGATGATGATGACGGTGAAATGGAACTTGATGATGAAATGGAACTTCTTCAAGCAATGGCGGCCAGGCACAAGAGTAGGGAAAAGCTTTATGGTGATGGTGATGATGACGGTGAAATGGAACTTCTAAAAGCAATGGCAGCCAGGCAGAAGAGTAGGGAAAATGTTGGTGAAGCAGTTGGAGTTGATGATGGTGATAGTGGGAGCGAGGATGAAATGGATATTCTTGAAGCATTGGTGGCAGGGCGAAAGAGTAGGAAAAATGCAGCTTCAAGGGTTGAGGTTGAGGATCCCTTGGTGACCGGTGTTCATGTGGATAATGATAGCAATGGTGTAGAGTCCGTTCCTATGGAATATGAGAATCGGAAGCCCACCAGAAGGAAAGGGAAGAGCAAGAAGAGTGGTGGAGAAACTAAAAGGGTCGATATGAATGAAATTAGTAATGGTCAAAGTGAGGCAGCTAGTGAAAATGATAATTCAGATGTAAAGGAATCCACATCTGATTCTATGGTGGAAATGGCGAGTACTAACGAAAAACAGGATGATCAAATAGCCAGAAAAAAGAAATCTTCAAAACAAACTGTTGAGAAGAAGAAAGAGAATGTGAAGAAAGAGGCCAACGGCAAATCAAAGAGCTCCTCCAAAGGGAAGAAAGCTAAGGCAACGTCAAAGAATTCTAGCAATGCATGTGAGGCATGTGGAGAGGAGTTTGGATCAAGGAATCAATTACATAAGCATTTAGGTGACACTGGACATGCTTCACTGAAGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ zf-C2H2_jaz

Protein Analysis

675

Amino Acids

76.39

Weight (kDa)

4.91

Isoelectric Point (pI)

43.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 6 - 71 7.7e-22 DnaJ domain
ZUO1-like_ZHD PF21884 120 - 229 8.2e-21 Zuotin-like, zuotin homology domain
zf-C2H2_jaz PF12171 294 - 319 1.7e-10 Zinc-finger double-stranded RNA-binding
zf-met PF12874 294 - 318 1.9e-08 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 366, 552
AccB1I GGYRCC 1 cut(s) 12
AccBSI CCGCTC 2 cut(s) 7, 222
AccI GTMKAC 2 cut(s) 36, 354
AccII CGCG 3 cut(s) 42, 401, 428
AclWI GGATC 6 cut(s) 223, 236, 546, 1538, 1551, 1975
AcoI YGGCCR 3 cut(s) 163, 1212, 1317
AcsI RAATTY 3 cut(s) 454, 1122, 1927
AcuI CTGAAG 1 cut(s) 274
AcyI GRCGYC 5 cut(s) 33, 123, 138, 363, 549
AfaI GTAC 4 cut(s) 74, 209, 514, 1780
AfiI CCNNNNNNNGG 6 cut(s) 22, 154, 449, 1039, 1632, 1899
AgeI ACCGGT 1 cut(s) 1556
AgsI TTSAA 7 cut(s) 370, 460, 1202, 1307, 1484, 1527, 1827
AjnI CCWGG 6 cut(s) 129, 153, 203, 1214, 1319, 1397
AjuI GAANNNNNNNTTGG 2 cut(s) 134, 166
Alw21I GWGCWC 3 cut(s) 30, 162, 1892
Alw26I GTCTC 1 cut(s) 130
AlwI GGATC 6 cut(s) 223, 236, 546, 1538, 1551, 1975
AoxI GGCC 6 cut(s) 132, 163, 560, 1212, 1317, 1869
ApeKI GCWGC 5 cut(s) 45, 91, 1394, 1520, 1712
ApoI RAATTY 3 cut(s) 454, 1122, 1927
AsiGI ACCGGT 1 cut(s) 1556
Asp700I GAANNNNTTC 2 cut(s) 1197, 1302
AspLEI GCGC 1 cut(s) 96
AspS9I GGNCC 2 cut(s) 178, 560
AvaII GGWCC 1 cut(s) 178
BamHI GGATCC 1 cut(s) 1543
BanI GGYRCC 1 cut(s) 12
BanII GRGCYC 2 cut(s) 162, 1892
BbsI GAAGAC 2 cut(s) 304, 358
Bbv12I GWGCWC 3 cut(s) 30, 162, 1892
BbvI GCAGC 5 cut(s) 32, 103, 1406, 1532, 1724
BccI CCATC 8 cut(s) 514, 580, 682, 691, 754, 1064, 1346, 1439
BceAI ACGGC 2 cut(s) 498, 1891
BciT130I CCWGG 6 cut(s) 131, 155, 205, 1216, 1321, 1399
BclI TGATCA 1 cut(s) 1798
BcoDI GTCTC 1 cut(s) 130
BfaI CTAG 3 cut(s) 503, 1716, 1932
BfmI CTRYAG 1 cut(s) 89
BfoI RGCGCY 1 cut(s) 97
BmcAI AGTACT 1 cut(s) 1780
Bme1390I CCNGG 6 cut(s) 131, 155, 205, 1216, 1321, 1399
Bme18I GGWCC 1 cut(s) 178
BmgT120I GGNCC 2 cut(s) 178, 560
BmiI GGNNCC 5 cut(s) 14, 441, 561, 801, 1545
BmrFI CCNGG 6 cut(s) 131, 155, 205, 1216, 1321, 1399
BmrI ACTGGG 1 cut(s) 142
BmsI GCATC 3 cut(s) 1231, 1237, 1243
BmuI ACTGGG 1 cut(s) 142
BpiI GAAGAC 2 cut(s) 304, 358
BplI GAGNNNNNCTC 4 cut(s) 167, 199, 424, 456
BpmI CTGGAG 2 cut(s) 797, 1098
Bpu10I CCTNAGC 2 cut(s) 474, 1911
BsaHI GRCGYC 5 cut(s) 33, 123, 138, 363, 549
BsaJI CCNNGG 3 cut(s) 40, 129, 1548
BsaWI WCCGGW 2 cut(s) 75, 1556
BsaXI ACNNNNNCTCC 5 cut(s) 26, 314, 344, 791, 821
Bsc4I CCNNNNNNNGG 6 cut(s) 22, 154, 449, 1039, 1632, 1899
Bse118I RCCGGY 3 cut(s) 119, 1088, 1556
Bse1I ACTGG 4 cut(s) 148, 503, 780, 2008
Bse3DI GCAATG 5 cut(s) 1212, 1317, 1395, 1588, 1942
BseBI CCWGG 6 cut(s) 131, 155, 205, 1216, 1321, 1399
BseDI CCNNGG 3 cut(s) 40, 129, 1548
BseGI GGATG 9 cut(s) 111, 276, 847, 997, 1024, 1072, 1162, 1471, 1801
BseLI CCNNNNNNNGG 6 cut(s) 22, 154, 449, 1039, 1632, 1899
BseMI GCAATG 5 cut(s) 1212, 1317, 1395, 1588, 1942
BseMII CTCAG 2 cut(s) 383, 488
BseNI ACTGG 4 cut(s) 148, 503, 780, 2008
BseXI GCAGC 5 cut(s) 32, 103, 1406, 1532, 1724
BseYI CCCAGC 1 cut(s) 531
BsgI GTGCAG 1 cut(s) 31
Bsh1236I CGCG 3 cut(s) 42, 401, 428
Bsh1285I CGRYCG 2 cut(s) 40, 822
BshFI GGCC 6 cut(s) 134, 165, 562, 1214, 1319, 1871
BshNI GGYRCC 1 cut(s) 12
BshTI ACCGGT 1 cut(s) 1556
BsiEI CGRYCG 2 cut(s) 40, 822
BsiHKAI GWGCWC 3 cut(s) 30, 162, 1892
BsiSI CCGG 8 cut(s) 76, 120, 318, 333, 443, 803, 1089, 1557
BslFI GGGAC 1 cut(s) 248
BslI CCNNNNNNNGG 6 cut(s) 22, 154, 449, 1039, 1632, 1899
BsmAI GTCTC 1 cut(s) 130
BsmBI CGTCTC 1 cut(s) 130
BsmFI GGGAC 1 cut(s) 248
BsnI GGCC 6 cut(s) 134, 165, 562, 1214, 1319, 1871
Bsp1286I GDGCHC 3 cut(s) 30, 162, 1892
Bsp143I GATC 7 cut(s) 60, 228, 241, 538, 1543, 1798, 1967
Bsp68I TCGCGA 1 cut(s) 401
BspANI GGCC 6 cut(s) 134, 165, 562, 1214, 1319, 1871
BspCNI CTCAG 2 cut(s) 384, 487
BspFNI CGCG 3 cut(s) 42, 401, 428
BspHI TCATGA 1 cut(s) 934
BspLI GGNNCC 5 cut(s) 14, 441, 561, 801, 1545
BspMAI CTGCAG 1 cut(s) 93
BspPI GGATC 6 cut(s) 223, 236, 546, 1538, 1551, 1975
BspQI GCTCTTC 2 cut(s) 455, 1637
BspT107I GGYRCC 1 cut(s) 12
BsrBI CCGCTC 2 cut(s) 7, 222
BsrDI GCAATG 5 cut(s) 1212, 1317, 1395, 1588, 1942
BsrFI RCCGGY 3 cut(s) 119, 1088, 1556
BsrI ACTGG 4 cut(s) 148, 503, 780, 2008
BssAI RCCGGY 3 cut(s) 119, 1088, 1556
BssECI CCNNGG 3 cut(s) 40, 129, 1548
BssMI GATC 7 cut(s) 60, 228, 241, 538, 1543, 1798, 1967
BssNI GRCGYC 5 cut(s) 33, 123, 138, 363, 549
BssT1I CCWWGG 1 cut(s) 1548
Bst2UI CCWGG 6 cut(s) 131, 155, 205, 1216, 1321, 1399
Bst4CI ACNGT 6 cut(s) 310, 517, 643, 1271, 1367, 1837
BstACI GRCGYC 5 cut(s) 33, 123, 138, 363, 549
BstC8I GCNNGC 2 cut(s) 201, 1090
BstDEI CTNAG 4 cut(s) 392, 474, 621, 1911
BstDSI CCRYGG 1 cut(s) 40
BstEII GGTNACC 2 cut(s) 1028, 1552
BstF5I GGATG 9 cut(s) 111, 276, 847, 997, 1024, 1072, 1162, 1471, 1801
BstFNI CGCG 3 cut(s) 42, 401, 428
BstH2I RGCGCY 1 cut(s) 97
BstHHI GCGC 1 cut(s) 96
BstKTI GATC 7 cut(s) 63, 231, 244, 541, 1546, 1801, 1970
BstMAI GTCTC 1 cut(s) 130
BstMBI GATC 7 cut(s) 60, 228, 241, 538, 1543, 1798, 1967
BstMCI CGRYCG 2 cut(s) 40, 822
BstMWI GCNNNNNNNGC 6 cut(s) 39, 1211, 1316, 1394, 1493, 1946
BstNI CCWGG 6 cut(s) 131, 155, 205, 1216, 1321, 1399
BstNSI RCATGY 3 cut(s) 1944, 1953, 2012
BstPI GGTNACC 2 cut(s) 1028, 1552
BstSCI CCNGG 6 cut(s) 129, 153, 203, 1214, 1319, 1397
BstSFI CTRYAG 1 cut(s) 89
BstUI CGCG 3 cut(s) 42, 401, 428
BstV1I GCAGC 5 cut(s) 32, 103, 1406, 1532, 1724
BstV2I GAAGAC 2 cut(s) 304, 358
BstX2I RGATCY 2 cut(s) 228, 1543
BstYI RGATCY 2 cut(s) 228, 1543
BsuRI GGCC 6 cut(s) 134, 165, 562, 1214, 1319, 1871
BtgI CCRYGG 1 cut(s) 40
BtsCI GGATG 9 cut(s) 111, 276, 847, 997, 1024, 1072, 1162, 1471, 1801
BtsI GCAGTG 1 cut(s) 929
BtsIMutI CAGTG 4 cut(s) 639, 929, 2001, 2015
BtuMI TCGCGA 1 cut(s) 401
Cac8I GCNNGC 2 cut(s) 201, 1090
CciI TCATGA 1 cut(s) 934
CfoI GCGC 1 cut(s) 96
Cfr10I RCCGGY 3 cut(s) 119, 1088, 1556
Cfr13I GGNCC 2 cut(s) 178, 560
Cfr42I CCGCGG 1 cut(s) 43
CseI GACGC 4 cut(s) 22, 112, 146, 434
Csp6I GTAC 4 cut(s) 73, 208, 513, 1779
CspAI ACCGGT 1 cut(s) 1556
CspCI CAANNNNNGTGG 2 cut(s) 1636, 1671
CviAII CATG 6 cut(s) 553, 935, 1565, 1941, 1950, 2009
CviQI GTAC 4 cut(s) 73, 208, 513, 1779
DdeI CTNAG 4 cut(s) 392, 474, 621, 1911
DpnI GATC 7 cut(s) 62, 230, 243, 540, 1545, 1800, 1969
DpnII GATC 7 cut(s) 60, 228, 241, 538, 1543, 1798, 1967
EaeI YGGCCR 3 cut(s) 163, 1212, 1317
EciI GGCGGA 2 cut(s) 238, 671
Ecl136II GAGCTC 2 cut(s) 160, 1890
Eco130I CCWWGG 1 cut(s) 1548
Eco24I GRGCYC 2 cut(s) 162, 1892
Eco47I GGWCC 1 cut(s) 178
Eco53kI GAGCTC 2 cut(s) 160, 1890
Eco57I CTGAAG 1 cut(s) 274
Eco91I GGTNACC 2 cut(s) 1028, 1552
EcoICRI GAGCTC 2 cut(s) 160, 1890
EcoO109I RGGNCCY 1 cut(s) 178
EcoO65I GGTNACC 2 cut(s) 1028, 1552
EcoRI GAATTC 1 cut(s) 1927
EcoRII CCWGG 6 cut(s) 129, 153, 203, 1214, 1319, 1397
EcoT14I CCWWGG 1 cut(s) 1548
EcoT22I ATGCAT 1 cut(s) 1942
EcoT38I GRGCYC 2 cut(s) 162, 1892
ErhI CCWWGG 1 cut(s) 1548
Esp3I CGTCTC 1 cut(s) 130
FaeI CATG 6 cut(s) 556, 938, 1568, 1944, 1953, 2012
FaqI GGGAC 1 cut(s) 248
FatI CATG 6 cut(s) 552, 934, 1564, 1940, 1949, 2008
FauI CCCGC 2 cut(s) 550, 639
FbaI TGATCA 1 cut(s) 1798
FblI GTMKAC 2 cut(s) 36, 354
FokI GGATG 9 cut(s) 98, 263, 854, 1004, 1031, 1079, 1169, 1478, 1808
FriOI GRGCYC 2 cut(s) 162, 1892
FspBI CTAG 3 cut(s) 503, 1716, 1932
GlaI GCGC 1 cut(s) 95
GsaI CCCAGC 1 cut(s) 535
GsuI CTGGAG 2 cut(s) 797, 1098
HaeII RGCGCY 1 cut(s) 97
HaeIII GGCC 6 cut(s) 134, 165, 562, 1214, 1319, 1871
HapII CCGG 8 cut(s) 76, 120, 318, 333, 443, 803, 1089, 1557
HgaI GACGC 4 cut(s) 22, 112, 146, 434
HhaI GCGC 1 cut(s) 96
Hin1I GRCGYC 5 cut(s) 33, 123, 138, 363, 549
Hin1II CATG 6 cut(s) 556, 938, 1568, 1944, 1953, 2012
Hin6I GCGC 1 cut(s) 94
HinP1I GCGC 1 cut(s) 94
HincII GTYRAC 1 cut(s) 37
HindII GTYRAC 1 cut(s) 37
HindIII AAGCTT 3 cut(s) 1136, 1235, 1340
HpaII CCGG 8 cut(s) 76, 120, 318, 333, 443, 803, 1089, 1557
Hpy166II GTNNAC 2 cut(s) 37, 355
Hpy188I TCNGA 7 cut(s) 187, 328, 570, 1128, 1620, 1735, 1756
Hpy188III TCNNGA 3 cut(s) 400, 935, 1481
Hpy8I GTNNAC 2 cut(s) 37, 355
Hpy99I CGWCG 5 cut(s) 38, 59, 140, 365, 1097
HpyAV CCTTC 6 cut(s) 187, 565, 610, 727, 830, 1626
HpyCH4III ACNGT 6 cut(s) 310, 517, 643, 1271, 1367, 1837
HpyCH4IV ACGT 3 cut(s) 363, 549, 1919
HpyCH4V TGCA 4 cut(s) 48, 91, 1520, 1940
HpyF10VI GCNNNNNNNGC 6 cut(s) 39, 1211, 1316, 1394, 1493, 1946
HpyF3I CTNAG 4 cut(s) 392, 474, 621, 1911
HpySE526I ACGT 3 cut(s) 363, 549, 1919
Hsp92I GRCGYC 5 cut(s) 33, 123, 138, 363, 549
Hsp92II CATG 6 cut(s) 556, 938, 1568, 1944, 1953, 2012
HspAI GCGC 1 cut(s) 94
KroI GCCGGC 1 cut(s) 1088
KroNI GCCGGC 1 cut(s) 1090
Ksp22I TGATCA 1 cut(s) 1798
KspI CCGCGG 1 cut(s) 43
Kzo9I GATC 7 cut(s) 60, 228, 241, 538, 1543, 1798, 1967
LguI GCTCTTC 2 cut(s) 455, 1637
LmnI GCTCC 9 cut(s) 4, 157, 196, 227, 445, 799, 997, 1458, 1895
Lsp1109I GCAGC 5 cut(s) 32, 103, 1406, 1532, 1724
LweI GCATC 3 cut(s) 1231, 1237, 1243
MaeI CTAG 3 cut(s) 503, 1716, 1932
MaeII ACGT 3 cut(s) 363, 549, 1919
MaeIII GTNAC 4 cut(s) 478, 1028, 1552, 1997
MalI GATC 7 cut(s) 62, 230, 243, 540, 1545, 1800, 1969
MbiI CCGCTC 2 cut(s) 7, 222
MboI GATC 7 cut(s) 60, 228, 241, 538, 1543, 1798, 1967
MflI RGATCY 2 cut(s) 228, 1543
MhlI GDGCHC 3 cut(s) 30, 162, 1892
MluCI AATT 6 cut(s) 454, 1122, 1689, 1729, 1927, 1979
MlyI GAGTC 5 cut(s) 206, 263, 323, 989, 1601
MmeI TCCRAC 3 cut(s) 210, 351, 1414
Mph1103I ATGCAT 1 cut(s) 1942
MroNI GCCGGC 1 cut(s) 1088
MroXI GAANNNNTTC 2 cut(s) 1197, 1302
MseI TTAA 1 cut(s) 909
MslI CAYNNNNRTG 1 cut(s) 1995
MspA1I CMGCKG 1 cut(s) 42
MspI CCGG 8 cut(s) 76, 120, 318, 333, 443, 803, 1089, 1557
MspR9I CCNGG 6 cut(s) 131, 155, 205, 1216, 1321, 1399
MvaI CCWGG 6 cut(s) 131, 155, 205, 1216, 1321, 1399
MvnI CGCG 3 cut(s) 42, 401, 428
MwoI GCNNNNNNNGC 6 cut(s) 39, 1211, 1316, 1394, 1493, 1946
NaeI GCCGGC 1 cut(s) 1090
NdeII GATC 7 cut(s) 60, 228, 241, 538, 1543, 1798, 1967
NgoMIV GCCGGC 1 cut(s) 1088
NlaIII CATG 6 cut(s) 556, 938, 1568, 1944, 1953, 2012
NlaIV GGNNCC 5 cut(s) 14, 441, 561, 801, 1545
NmeAIII GCCGAG 2 cut(s) 9, 141
NmuCI GTSAC 4 cut(s) 478, 1028, 1552, 1997
NruI TCGCGA 1 cut(s) 401
NsiI ATGCAT 1 cut(s) 1942
NspI RCATGY 3 cut(s) 1944, 1953, 2012
PagI TCATGA 1 cut(s) 934
PciSI GCTCTTC 2 cut(s) 455, 1637
PdiI GCCGGC 1 cut(s) 1090
PdmI GAANNNNTTC 2 cut(s) 1197, 1302
PfeI GAWTC 6 cut(s) 565, 931, 1615, 1745, 1757, 1975
PflFI GACNNNGTC 1 cut(s) 272
PfoI TCCNGGA 1 cut(s) 153
PinAI ACCGGT 1 cut(s) 1556
PleI GAGTC 5 cut(s) 206, 263, 323, 988, 1600
PpsI GAGTC 5 cut(s) 206, 263, 323, 988, 1600
PpuMI RGGWCCY 1 cut(s) 178
Psp124BI GAGCTC 2 cut(s) 162, 1892
Psp5II RGGWCCY 1 cut(s) 178
Psp6I CCWGG 6 cut(s) 129, 153, 203, 1214, 1319, 1397
PspEI GGTNACC 2 cut(s) 1028, 1552
PspFI CCCAGC 1 cut(s) 531
PspGI CCWGG 6 cut(s) 129, 153, 203, 1214, 1319, 1397
PspN4I GGNNCC 5 cut(s) 14, 441, 561, 801, 1545
PspPI GGNCC 2 cut(s) 178, 560
PspPPI RGGWCCY 1 cut(s) 178
PsrI GAACNNNNNNTAC 2 cut(s) 1581, 1613
PstI CTGCAG 1 cut(s) 93
PsuI RGATCY 2 cut(s) 228, 1543
PsyI GACNNNGTC 1 cut(s) 272
RruI TCGCGA 1 cut(s) 401
RsaI GTAC 4 cut(s) 74, 209, 514, 1780
RsaNI GTAC 4 cut(s) 73, 208, 513, 1779
RseI CAYNNNNRTG 1 cut(s) 1995
SacI GAGCTC 2 cut(s) 162, 1892
SacII CCGCGG 1 cut(s) 43
SalI GTCGAC 1 cut(s) 35
SapI GCTCTTC 2 cut(s) 455, 1637
SaqAI TTAA 1 cut(s) 909
Sau3AI GATC 7 cut(s) 60, 228, 241, 538, 1543, 1798, 1967
Sau96I GGNCC 2 cut(s) 178, 560
ScaI AGTACT 1 cut(s) 1780
SchI GAGTC 5 cut(s) 206, 263, 323, 989, 1601
ScrFI CCNGG 6 cut(s) 131, 155, 205, 1216, 1321, 1399
SduI GDGCHC 3 cut(s) 30, 162, 1892
SfaNI GCATC 3 cut(s) 1231, 1237, 1243
SfcI CTRYAG 1 cut(s) 89
Sfr303I CCGCGG 1 cut(s) 43
SgrAI CRCCGGYG 1 cut(s) 119
SgrBI CCGCGG 1 cut(s) 43
SinI GGWCC 1 cut(s) 178
SmiMI CAYNNNNRTG 1 cut(s) 1995
Sse9I AATT 6 cut(s) 454, 1122, 1689, 1729, 1927, 1979
SspMI CTAG 3 cut(s) 503, 1716, 1932
SstI GAGCTC 2 cut(s) 162, 1892
StyD4I CCNGG 6 cut(s) 129, 153, 203, 1214, 1319, 1397
StyI CCWWGG 1 cut(s) 1548
TaaI ACNGT 6 cut(s) 310, 517, 643, 1271, 1367, 1837
TaiI ACGT 3 cut(s) 366, 552, 1922
TaqI TCGA 5 cut(s) 36, 383, 822, 983, 1677
TasI AATT 6 cut(s) 454, 1122, 1689, 1729, 1927, 1979
TatI WGTACW 1 cut(s) 1778
TauI GCSGC 5 cut(s) 10, 45, 254, 1214, 1319
TfiI GAWTC 6 cut(s) 565, 931, 1615, 1745, 1757, 1975
Tru1I TTAA 1 cut(s) 909
Tru9I TTAA 1 cut(s) 909
TscAI CASTG 4 cut(s) 646, 929, 2008, 2022
TseFI GTSAC 4 cut(s) 478, 1028, 1552, 1997
TseI GCWGC 5 cut(s) 45, 91, 1394, 1520, 1712
Tsp45I GTSAC 4 cut(s) 478, 1028, 1552, 1997
TspDTI ATGAA 8 cut(s) 1020, 1134, 1200, 1305, 1482, 1553, 1697, 1701
TspGWI ACGGA 4 cut(s) 250, 262, 1145, 1585
TspRI CASTG 4 cut(s) 646, 929, 2008, 2022
Tth111I GACNNNGTC 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 178
XapI RAATTY 3 cut(s) 454, 1122, 1927
XceI RCATGY 3 cut(s) 1944, 1953, 2012
XmiI GTMKAC 2 cut(s) 36, 354
XmnI GAANNNNTTC 2 cut(s) 1197, 1302
XspI CTAG 3 cut(s) 503, 1716, 1932
ZraI GACGTC 2 cut(s) 364, 550
ZrmI AGTACT 1 cut(s) 1780
Zsp2I ATGCAT 1 cut(s) 1942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.