MD06G1202400.v1.1

dnaJ homolog subfamily C member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0010033
Physical Location & Seq
Reverse (-)
33562445 .. 33565319
2875 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1202400.v1.1.491

Sequence Viewer

Length: 1818 bp
ATGGCGGCGTCGGAGAGGCGGTGCCACTACGAGGTTTTAGGTCTCCCCCGCGACTCCTCCGCCGACGAGATCCGGTCGGCTTACAGGAAGCTCGCTCTCCAGCGCCACCCGGACAAGCTAGTCCAGTCCGGCTTGTCCCAGTCCGAAGCCACGGCCCAGTTCCAGGAGCTGGCCCATGCCTACGAGGTCCTCTCCGACCCCAAAGAGCGAGCTTGGTACGACTCTCACCGCTCCCAAATCCTCTTCTCCGACCGCGGATCGGCCGCCTCGGCCTCCGGCTCCGGCATCCCTAATCTCTTCCCCTTCTTCTCCACCACCGTATTCTCCGGCTACTCCGACTCCGGCCGCGGATTTTATAAGGTATATTCCGATGTCTTCGACAAAATCTACGCCAACGAGCTCAATTTTGCTAGGAAATTAGGGTTAGGGTTGGACACCGTGCGTGAAGCTCCAGCGATGGGGAATTTAGAGAGTCCGTACGCGCAGGTCACCGCGTTTTACAACTACTGGGCAGGTTTTTGTACGGTGATGGATTTTTGCTGGGAGGACATGTATGACGTGTTGGCCGGTCCGAACCGGAAGTCGAGGAGGCTGATGGAGGAGGAAAACAAGAAGGTGAGGAAGAAGGCGAAGAGAGAGTTCAACGAGACGGTGCGGGGGTTGTCGGATTTTGTGAAGAAGAGGGATAAGAGGGTGATGGATATGATGCTGAAGAAGGAGGAGGAGAGGGTGAGGAAGAGCGAGGAGGAGAGAGAGAGGAAGAAGAAGTTGGAGAAGGAGAAATTGGAGAGGGCTATGGCGTATGAGGAGCCGGCGTGGGCGAAAGTGGAGGAGGAGGAGGAAGGAGGCAATGGGGTTGAGGAATTGGAGGAGGACGAGGAGGAGGAGAGGAGGAGGAAGGAATTGTATTGTGTGGTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAGTGGAAGAATCACGAGCAGTCGAAGAAGCATCGCGATAAAATTGCAGAGTTTCAGGAGTCAGTTGGGGATGAAGAGCTTGAAGTTGATGATGAAGACGTTTTGGAGGGAGAGGGTGAAGAAAGGGGTGAGCTTGGCGATGTTGATGAATTAGGTCAGGAGATTAGAGAGGGGTTGAAGATTGGGGAGGAGGAAGATGGGGTAGGAGGGAGTGATCAGGAGGATGAGTTGCGCAAATTTGGTGGTGAAAATGGGAGCGAAAAGGTTGACGAGGCAGTTGGGTTGGATGGTGAGGAAGATGAAGATGAAATGGATGTTCTCGAAGCAATGGTGACCGGGCGAAAGAGTAAGAAAAAGGTATCCTTTAGGGTTGAACCTGAGGATATCTTGGTTAACGATATTCGTGTGGAGAATGATGACGATGATGCTGAGTTCATGGAATATAATAACCGGAAGAGTGCAAGAAGGAAAGGAGGAGCCAGGAAAGAGAGGAGTAAGAAGAATGGTGGTGAAGCTAATAATGTTGATAAAAGTGAAAACAACGGTGGTCAGAATGAGGAGAGTAATGAACAAGATAATTCAACTATGAAGGAATCCACATCTCATTCTGTTGTGGAAAAGGAGAGTATTGATAAAGGGGATGAACTGTCAGCACGAAAGAAGAAGAGCTCAAGCAAAGCGGTCGATAAGAAAGAGAAAGTGAAGAAAGAGGCAAACGACAAATCAAAGAACTCATCTAAAGGGAAGAAAGCTAAGGGAGCATCGAAGAATACTGGCAATGTATGTGATACATGTGGAGAGGAGTTCGAATCAAGAAACAAGTTACATATGCATTTGGGTGACACTGGACATTCGAAGCTGAAGTATCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ zf-C2H2_jaz

Protein Analysis

606

Amino Acids

68.95

Weight (kDa)

5.18

Isoelectric Point (pI)

45.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 9 - 74 4.2e-22 DnaJ domain
ZUO1-like_ZHD PF21884 118 - 232 2.1e-20 Zuotin-like, zuotin homology domain
zf-C2H2_jaz PF12171 302 - 327 1.3e-10 Zinc-finger double-stranded RNA-binding
zf-met PF12874 302 - 326 1.7e-08 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 357
AasI GACNNNNNNGTC 1 cut(s) 119
Acc16I TGCGCA 1 cut(s) 1178
Acc36I ACCTGC 2 cut(s) 475, 503
AccB1I GGYRCC 1 cut(s) 21
AccB7I CCANNNNNTGG 1 cut(s) 169
AccBSI CCGCTC 1 cut(s) 231
AccII CGCG 6 cut(s) 51, 255, 348, 482, 494, 981
AclWI GGATC 2 cut(s) 64, 265
AcoI YGGCCR 3 cut(s) 261, 343, 564
AcsI RAATTY 2 cut(s) 463, 1181
AcuI CTGAAG 1 cut(s) 731
AcyI GRCGYC 1 cut(s) 8
AfaI GTAC 3 cut(s) 218, 479, 523
AfiI CCNNNNNNNGG 5 cut(s) 31, 163, 169, 259, 458
AflIII ACRYGT 3 cut(s) 549, 558, 1736
AgsI TTSAA 5 cut(s) 643, 1028, 1123, 1319, 1527
AjiI CACGTC 1 cut(s) 559
AjnI CCWGG 2 cut(s) 162, 1424
AjuI GAANNNNNNNTTGG 4 cut(s) 752, 767, 784, 799
Alw21I GWGCWC 2 cut(s) 402, 1616
Alw26I GTCTC 2 cut(s) 47, 641
AlwI GGATC 2 cut(s) 64, 265
AlwNI CAGNNNCTG 1 cut(s) 169
AoxI GGCC 6 cut(s) 153, 171, 261, 270, 343, 564
ApoI RAATTY 2 cut(s) 463, 1181
ArsI GACNNNNNNTTYG 2 cut(s) 566, 598
AspLEI GCGC 3 cut(s) 105, 484, 1179
AspS9I GGNCC 4 cut(s) 154, 172, 187, 569
AsuC2I CCSGG 2 cut(s) 110, 1282
AsuII TTCGAA 2 cut(s) 1752, 1799
AvaII GGWCC 2 cut(s) 187, 569
AxyI CCTNAGG 1 cut(s) 1323
BanI GGYRCC 1 cut(s) 21
BanII GRGCYC 2 cut(s) 402, 1616
BauI CACGAG 1 cut(s) 959
BbsI GAAGAC 2 cut(s) 367, 1047
Bbv12I GWGCWC 2 cut(s) 402, 1616
BccI CCATC 6 cut(s) 451, 523, 589, 691, 1136, 1226
BceAI ACGGC 1 cut(s) 168
BcgI CGANNNNNNTGC 4 cut(s) 971, 1005, 1609, 1643
BciT130I CCWGG 2 cut(s) 164, 1426
BciVI GTATCC 1 cut(s) 1315
BclI TGATCA 1 cut(s) 1159
BcnI CCSGG 2 cut(s) 110, 1282
BcoDI GTCTC 2 cut(s) 47, 641
BfaI CTAG 2 cut(s) 119, 411
BfoI RGCGCY 1 cut(s) 106
BfuAI ACCTGC 2 cut(s) 475, 503
BfuI GTATCC 1 cut(s) 1315
BglI GCCNNNNNGGC 1 cut(s) 269
BisI GCNGC 3 cut(s) 6, 264, 346
BlsI GCNGC 3 cut(s) 7, 265, 347
Bme1390I CCNGG 4 cut(s) 110, 164, 1282, 1426
Bme18I GGWCC 2 cut(s) 187, 569
BmgBI CACGTC 1 cut(s) 559
BmgT120I GGNCC 4 cut(s) 154, 172, 187, 569
BmiI GGNNCC 4 cut(s) 23, 280, 810, 1423
BmrFI CCNGG 4 cut(s) 110, 164, 1282, 1426
BmrI ACTGGG 3 cut(s) 133, 151, 517
BmsI GCATC 5 cut(s) 294, 696, 985, 1360, 1715
BmuI ACTGGG 3 cut(s) 133, 151, 517
BpiI GAAGAC 2 cut(s) 367, 1047
BplI GAGNNNNNCTC 2 cut(s) 176, 208
BpmI CTGGAG 2 cut(s) 83, 435
Bpu10I CCTNAGC 1 cut(s) 1698
Bpu14I TTCGAA 2 cut(s) 1752, 1799
BpuEI CTTGAG 1 cut(s) 1600
BpuMI CCSGG 2 cut(s) 110, 1282
Bsa29I ATCGAT 1 cut(s) 1813
BsaHI GRCGYC 1 cut(s) 8
BsaI GGTCTC 1 cut(s) 47
BsaJI CCNNGG 4 cut(s) 150, 253, 267, 346
BsaWI WCCGGW 3 cut(s) 72, 576, 1395
Bsc4I CCNNNNNNNGG 5 cut(s) 31, 163, 169, 259, 458
Bse118I RCCGGY 2 cut(s) 566, 811
Bse1I ACTGG 6 cut(s) 124, 139, 157, 512, 1723, 1795
Bse21I CCTNAGG 1 cut(s) 1323
Bse3DI GCAATG 3 cut(s) 856, 1278, 1729
BseBI CCWGG 2 cut(s) 164, 1426
BseCI ATCGAT 1 cut(s) 1813
BseDI CCNNGG 4 cut(s) 150, 253, 267, 346
BseGI GGATG 6 cut(s) 285, 1021, 1174, 1237, 1264, 1591
BseLI CCNNNNNNNGG 5 cut(s) 31, 163, 169, 259, 458
BseMI GCAATG 3 cut(s) 856, 1278, 1729
BseMII CTCAG 2 cut(s) 1314, 1365
BseNI ACTGG 6 cut(s) 124, 139, 157, 512, 1723, 1795
BseX3I CGGCCG 2 cut(s) 261, 343
BseYI CCCAGC 1 cut(s) 540
Bsh1236I CGCG 6 cut(s) 51, 255, 348, 482, 494, 981
Bsh1285I CGRYCG 5 cut(s) 77, 253, 264, 346, 1629
BshFI GGCC 6 cut(s) 155, 173, 263, 272, 345, 566
BshNI GGYRCC 1 cut(s) 21
BshVI ATCGAT 1 cut(s) 1813
BsiEI CGRYCG 5 cut(s) 77, 253, 264, 346, 1629
BsiHKAI GWGCWC 2 cut(s) 402, 1616
BsiWI CGTACG 1 cut(s) 477
BslFI GGGAC 1 cut(s) 121
BslI CCNNNNNNNGG 5 cut(s) 31, 163, 169, 259, 458
BsmAI GTCTC 2 cut(s) 47, 641
BsmBI CGTCTC 1 cut(s) 641
BsmFI GGGAC 1 cut(s) 121
BsnI GGCC 6 cut(s) 155, 173, 263, 272, 345, 566
Bso31I GGTCTC 1 cut(s) 47
Bsp119I TTCGAA 2 cut(s) 1752, 1799
Bsp1286I GDGCHC 2 cut(s) 402, 1616
Bsp143I GATC 3 cut(s) 69, 257, 1159
Bsp68I TCGCGA 1 cut(s) 981
BspANI GGCC 6 cut(s) 155, 173, 263, 272, 345, 566
BspCNI CTCAG 2 cut(s) 1315, 1366
BspDI ATCGAT 1 cut(s) 1813
BspFNI CGCG 6 cut(s) 51, 255, 348, 482, 494, 981
BspLI GGNNCC 4 cut(s) 23, 280, 810, 1423
BspMI ACCTGC 2 cut(s) 475, 503
BspPI GGATC 2 cut(s) 64, 265
BspQI GCTCTTC 3 cut(s) 731, 1014, 1604
BspT104I TTCGAA 2 cut(s) 1752, 1799
BspT107I GGYRCC 1 cut(s) 21
BspTNI GGTCTC 1 cut(s) 47
BsrBI CCGCTC 1 cut(s) 231
BsrDI GCAATG 3 cut(s) 856, 1278, 1729
BsrFI RCCGGY 2 cut(s) 566, 811
BsrI ACTGG 6 cut(s) 124, 139, 157, 512, 1723, 1795
BssAI RCCGGY 2 cut(s) 566, 811
BssECI CCNNGG 4 cut(s) 150, 253, 267, 346
BssMI GATC 3 cut(s) 69, 257, 1159
BssNI GRCGYC 1 cut(s) 8
BssSI CACGAG 1 cut(s) 959
Bst2BI CACGAG 1 cut(s) 959
Bst2UI CCWGG 2 cut(s) 164, 1426
Bst4CI ACNGT 6 cut(s) 319, 439, 526, 652, 1490, 1593
Bst6I CTCTTC 8 cut(s) 248, 302, 626, 674, 731, 1014, 1394, 1604
BstACI GRCGYC 1 cut(s) 8
BstBI TTCGAA 2 cut(s) 1752, 1799
BstC8I GCNNGC 4 cut(s) 93, 171, 210, 813
BstDEI CTNAG 3 cut(s) 1323, 1374, 1698
BstDSI CCRYGG 3 cut(s) 150, 253, 346
BstEII GGTNACC 2 cut(s) 487, 1276
BstF5I GGATG 6 cut(s) 285, 1021, 1174, 1237, 1264, 1591
BstFNI CGCG 6 cut(s) 51, 255, 348, 482, 494, 981
BstH2I RGCGCY 1 cut(s) 106
BstHHI GCGC 3 cut(s) 105, 484, 1179
BstKTI GATC 3 cut(s) 72, 260, 1162
BstMAI GTCTC 2 cut(s) 47, 641
BstMBI GATC 3 cut(s) 69, 257, 1159
BstMCI CGRYCG 5 cut(s) 77, 253, 264, 346, 1629
BstMWI GCNNNNNNNGC 2 cut(s) 269, 1703
BstNI CCWGG 2 cut(s) 164, 1426
BstNSI RCATGY 2 cut(s) 553, 1740
BstPI GGTNACC 2 cut(s) 487, 1276
BstSCI CCNGG 4 cut(s) 108, 162, 1280, 1424
BstUI CGCG 6 cut(s) 51, 255, 348, 482, 494, 981
BstV2I GAAGAC 2 cut(s) 367, 1047
BstX2I RGATCY 1 cut(s) 69
BstYI RGATCY 1 cut(s) 69
BstZI CGGCCG 2 cut(s) 261, 343
Bsu15I ATCGAT 1 cut(s) 1813
Bsu36I CCTNAGG 1 cut(s) 1323
BsuI GTATCC 1 cut(s) 1315
BsuRI GGCC 6 cut(s) 155, 173, 263, 272, 345, 566
BsuTUI ATCGAT 1 cut(s) 1813
BtgI CCRYGG 3 cut(s) 150, 253, 346
BtgZI GCGATG 3 cut(s) 470, 962, 1098
BtrI CACGTC 1 cut(s) 559
BtsCI GGATG 6 cut(s) 285, 1021, 1174, 1237, 1264, 1591
BtsI GCAGTG 1 cut(s) 953
BtsIMutI CAGTG 2 cut(s) 953, 1788
BtuMI TCGCGA 1 cut(s) 981
BveI ACCTGC 2 cut(s) 475, 503
Cac8I GCNNGC 4 cut(s) 93, 171, 210, 813
CaiI CAGNNNCTG 1 cut(s) 169
CfoI GCGC 3 cut(s) 105, 484, 1179
Cfr10I RCCGGY 2 cut(s) 566, 811
Cfr13I GGNCC 4 cut(s) 154, 172, 187, 569
Cfr42I CCGCGG 2 cut(s) 256, 349
ClaI ATCGAT 1 cut(s) 1813
CpoI CGGWCCG 1 cut(s) 569
Csp6I GTAC 3 cut(s) 217, 478, 522
CspCI CAANNNNNGTGG 2 cut(s) 1168, 1203
CspI CGGWCCG 1 cut(s) 569
CviAII CATG 4 cut(s) 176, 550, 1381, 1737
CviQI GTAC 3 cut(s) 217, 478, 522
DdeI CTNAG 3 cut(s) 1323, 1374, 1698
DpnI GATC 3 cut(s) 71, 259, 1161
DpnII GATC 3 cut(s) 69, 257, 1159
DrdI GACNNNNNNGTC 1 cut(s) 119
DseDI GACNNNNNNGTC 1 cut(s) 119
EaeI YGGCCR 3 cut(s) 261, 343, 564
EagI CGGCCG 2 cut(s) 261, 343
Eam1104I CTCTTC 8 cut(s) 248, 302, 626, 674, 731, 1014, 1394, 1604
EarI CTCTTC 8 cut(s) 248, 302, 626, 674, 731, 1014, 1394, 1604
EciI GGCGGA 1 cut(s) 49
Ecl136II GAGCTC 2 cut(s) 400, 1614
EclXI CGGCCG 2 cut(s) 261, 343
Eco24I GRGCYC 2 cut(s) 402, 1616
Eco31I GGTCTC 1 cut(s) 47
Eco32I GATATC 1 cut(s) 1330
Eco47I GGWCC 2 cut(s) 187, 569
Eco52I CGGCCG 2 cut(s) 261, 343
Eco53kI GAGCTC 2 cut(s) 400, 1614
Eco57I CTGAAG 1 cut(s) 731
Eco81I CCTNAGG 1 cut(s) 1323
Eco91I GGTNACC 2 cut(s) 487, 1276
EcoICRI GAGCTC 2 cut(s) 400, 1614
EcoO109I RGGNCCY 1 cut(s) 187
EcoO65I GGTNACC 2 cut(s) 487, 1276
EcoRII CCWGG 2 cut(s) 162, 1424
EcoRV GATATC 1 cut(s) 1330
EcoT22I ATGCAT 1 cut(s) 1779
EcoT38I GRGCYC 2 cut(s) 402, 1616
Esp3I CGTCTC 1 cut(s) 641
FaeI CATG 4 cut(s) 179, 553, 1384, 1740
FalI AAGNNNNNCTT 2 cut(s) 1292, 1324
FaqI GGGAC 1 cut(s) 121
FatI CATG 4 cut(s) 175, 549, 1380, 1736
FauI CCCGC 2 cut(s) 56, 648
FauNDI CATATG 1 cut(s) 1773
FbaI TGATCA 1 cut(s) 1159
Fnu4HI GCNGC 3 cut(s) 6, 264, 346
FokI GGATG 6 cut(s) 272, 1028, 1181, 1244, 1271, 1598
FriOI GRGCYC 2 cut(s) 402, 1616
Fsp4HI GCNGC 3 cut(s) 6, 264, 346
FspBI CTAG 2 cut(s) 119, 411
FspI TGCGCA 1 cut(s) 1178
GlaI GCGC 3 cut(s) 104, 483, 1178
GluI GCNGC 3 cut(s) 6, 264, 346
GsaI CCCAGC 1 cut(s) 544
GsuI CTGGAG 2 cut(s) 83, 435
HaeII RGCGCY 1 cut(s) 106
HaeIII GGCC 6 cut(s) 155, 173, 263, 272, 345, 566
HhaI GCGC 3 cut(s) 105, 484, 1179
Hin1I GRCGYC 1 cut(s) 8
Hin1II CATG 4 cut(s) 179, 553, 1384, 1740
Hin6I GCGC 3 cut(s) 103, 482, 1177
HinP1I GCGC 3 cut(s) 103, 482, 1177
HincII GTYRAC 2 cut(s) 1213, 1339
HindII GTYRAC 2 cut(s) 1213, 1339
HinfI GANTC 8 cut(s) 53, 221, 338, 472, 955, 1004, 1538, 1754
HpaI GTTAAC 1 cut(s) 1339
Hpy166II GTNNAC 2 cut(s) 1213, 1339
Hpy188I TCNGA 9 cut(s) 13, 145, 196, 250, 337, 370, 573, 667, 1497
Hpy188III TCNNGA 7 cut(s) 959, 980, 1001, 1103, 1163, 1265, 1758
Hpy8I GTNNAC 2 cut(s) 1213, 1339
Hpy99I CGWCG 2 cut(s) 13, 68
HpyAV CCTTC 9 cut(s) 313, 607, 619, 709, 769, 836, 892, 1404, 1528
HpyCH4III ACNGT 6 cut(s) 319, 439, 526, 652, 1490, 1593
HpyCH4IV ACGT 2 cut(s) 558, 1044
HpyCH4V TGCA 3 cut(s) 992, 1406, 1777
HpyF10VI GCNNNNNNNGC 2 cut(s) 269, 1703
HpyF3I CTNAG 3 cut(s) 1323, 1374, 1698
HpySE526I ACGT 2 cut(s) 558, 1044
Hsp92I GRCGYC 1 cut(s) 8
Hsp92II CATG 4 cut(s) 179, 553, 1384, 1740
HspAI GCGC 3 cut(s) 103, 482, 1177
KroI GCCGGC 1 cut(s) 811
KroNI GCCGGC 1 cut(s) 813
Ksp22I TGATCA 1 cut(s) 1159
KspAI GTTAAC 1 cut(s) 1339
KspI CCGCGG 2 cut(s) 256, 349
Kzo9I GATC 3 cut(s) 69, 257, 1159
LguI GCTCTTC 3 cut(s) 731, 1014, 1604
LmnI GCTCC 8 cut(s) 166, 236, 284, 454, 808, 1200, 1421, 1703
LweI GCATC 5 cut(s) 294, 696, 985, 1360, 1715
MaeI CTAG 2 cut(s) 119, 411
MaeII ACGT 2 cut(s) 558, 1044
MaeIII GTNAC 4 cut(s) 487, 1276, 1767, 1784
MalI GATC 3 cut(s) 71, 259, 1161
MbiI CCGCTC 1 cut(s) 231
MboI GATC 3 cut(s) 69, 257, 1159
MflI RGATCY 1 cut(s) 69
MhlI GDGCHC 2 cut(s) 402, 1616
MlyI GAGTC 5 cut(s) 47, 215, 332, 481, 1013
MmeI TCCRAC 7 cut(s) 219, 273, 360, 411, 645, 750, 1209
Mph1103I ATGCAT 1 cut(s) 1779
MroNI GCCGGC 1 cut(s) 811
MseI TTAA 2 cut(s) 933, 1338
MslI CAYNNNNRTG 1 cut(s) 1782
MspA1I CMGCKG 2 cut(s) 255, 348
MspR9I CCNGG 4 cut(s) 110, 164, 1282, 1426
MvaI CCWGG 2 cut(s) 164, 1426
MvnI CGCG 6 cut(s) 51, 255, 348, 482, 494, 981
MwoI GCNNNNNNNGC 2 cut(s) 269, 1703
NaeI GCCGGC 1 cut(s) 813
NciI CCSGG 2 cut(s) 110, 1282
NdeI CATATG 1 cut(s) 1773
NdeII GATC 3 cut(s) 69, 257, 1159
NgoMIV GCCGGC 1 cut(s) 811
NlaIII CATG 4 cut(s) 179, 553, 1384, 1740
NlaIV GGNNCC 4 cut(s) 23, 280, 810, 1423
NmeAIII GCCGAG 1 cut(s) 248
NmuCI GTSAC 3 cut(s) 487, 1276, 1784
NruI TCGCGA 1 cut(s) 981
NsbI TGCGCA 1 cut(s) 1178
NsiI ATGCAT 1 cut(s) 1779
NspI RCATGY 2 cut(s) 553, 1740
NspV TTCGAA 2 cut(s) 1752, 1799
PciI ACATGT 2 cut(s) 549, 1736
PciSI GCTCTTC 3 cut(s) 731, 1014, 1604
PdiI GCCGGC 1 cut(s) 813
PfeI GAWTC 3 cut(s) 955, 1538, 1754
Pfl23II CGTACG 1 cut(s) 477
PflMI CCANNNNNTGG 1 cut(s) 169
PfoI TCCNGGA 1 cut(s) 162
PkrI GCNGC 3 cut(s) 7, 265, 347
PleI GAGTC 5 cut(s) 47, 215, 332, 480, 1012
PpsI GAGTC 5 cut(s) 47, 215, 332, 480, 1012
PpuMI RGGWCCY 1 cut(s) 187
PscI ACATGT 2 cut(s) 549, 1736
PsiI TTATAA 1 cut(s) 357
Psp124BI GAGCTC 2 cut(s) 402, 1616
Psp5II RGGWCCY 1 cut(s) 187
Psp6I CCWGG 2 cut(s) 162, 1424
PspEI GGTNACC 2 cut(s) 487, 1276
PspFI CCCAGC 1 cut(s) 540
PspGI CCWGG 2 cut(s) 162, 1424
PspLI CGTACG 1 cut(s) 477
PspN4I GGNNCC 4 cut(s) 23, 280, 810, 1423
PspPI GGNCC 4 cut(s) 154, 172, 187, 569
PspPPI RGGWCCY 1 cut(s) 187
PstNI CAGNNNCTG 1 cut(s) 169
PsuI RGATCY 1 cut(s) 69
RruI TCGCGA 1 cut(s) 981
RsaI GTAC 3 cut(s) 218, 479, 523
RsaNI GTAC 3 cut(s) 217, 478, 522
RseI CAYNNNNRTG 1 cut(s) 1782
Rsr2I CGGWCCG 1 cut(s) 569
RsrII CGGWCCG 1 cut(s) 569
SacI GAGCTC 2 cut(s) 402, 1616
SacII CCGCGG 2 cut(s) 256, 349
SapI GCTCTTC 3 cut(s) 731, 1014, 1604
SaqAI TTAA 2 cut(s) 933, 1338
SatI GCNGC 3 cut(s) 6, 264, 346
Sau3AI GATC 3 cut(s) 69, 257, 1159
Sau96I GGNCC 4 cut(s) 154, 172, 187, 569
SchI GAGTC 5 cut(s) 47, 215, 332, 481, 1013
ScrFI CCNGG 4 cut(s) 110, 164, 1282, 1426
SduI GDGCHC 2 cut(s) 402, 1616
SfaNI GCATC 5 cut(s) 294, 696, 985, 1360, 1715
SfiI GGCCNNNNNGGCC 1 cut(s) 269
Sfr303I CCGCGG 2 cut(s) 256, 349
SfuI TTCGAA 2 cut(s) 1752, 1799
SgrBI CCGCGG 2 cut(s) 256, 349
SinI GGWCC 2 cut(s) 187, 569
SmiMI CAYNNNNRTG 1 cut(s) 1782
SmlI CTYRAG 1 cut(s) 1615
SmoI CTYRAG 1 cut(s) 1615
SspMI CTAG 2 cut(s) 119, 411
SstI GAGCTC 2 cut(s) 402, 1616
StyD4I CCNGG 4 cut(s) 108, 162, 1280, 1424
TaaI ACNGT 6 cut(s) 319, 439, 526, 652, 1490, 1593
TaiI ACGT 2 cut(s) 561, 1047
TaqI TCGA 9 cut(s) 378, 584, 968, 1266, 1629, 1709, 1752, 1799, 1813
TauI GCSGC 3 cut(s) 8, 266, 348
TfiI GAWTC 3 cut(s) 955, 1538, 1754
Tru1I TTAA 2 cut(s) 933, 1338
Tru9I TTAA 2 cut(s) 933, 1338
TscAI CASTG 2 cut(s) 953, 1795
TseFI GTSAC 3 cut(s) 487, 1276, 1784
Tsp45I GTSAC 3 cut(s) 487, 1276, 1784
TspDTI ATGAA 9 cut(s) 1032, 1053, 1107, 1260, 1266, 1369, 1527, 1547, 1602
TspGWI ACGGA 1 cut(s) 465
TspRI CASTG 2 cut(s) 953, 1795
Van91I CCANNNNNTGG 1 cut(s) 169
VpaK11BI GGWCC 2 cut(s) 187, 569
XapI RAATTY 2 cut(s) 463, 1181
XceI RCATGY 2 cut(s) 553, 1740
XspI CTAG 2 cut(s) 119, 411
Zsp2I ATGCAT 1 cut(s) 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.