Rh7AG055500

dnaJ homolog subfamily C member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0010033
Physical Location & Seq
Reverse (-)
3847548 .. 3851137
3590 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG055500.1

Sequence Viewer

Length: 1953 bp
ATGGAGCGGCGGTGCCACTACGAGGTGCTCGGCGTCGACCGCGGCTGCACCGCCGACGAGATCAAGTCGGCGTACCGGAAGCTCGCCCTGCAGCGCCACCCCGACAAGCTCATCCCCACCGGCGTCTCCCAGGCCGACGCCAACGCCCAGTTCCAGGAGCTCGGCCACGCCTACGAGGTCCTCTCCGACCCCAAGGAGCGAGCCTGGTACGACTCCCACCGCTCCCAGATCCTCTTCGCCGATCCCTCCGCCGCCAACTCCGTCCCCGACTCCGTCATCCCCAACCTCTTCAGCTTCTTCTCCACCACCGTCTTCTCCGGCTACTCCGACTCCGGCAAGGGCTTCTACAAGGTCTACGCCGACGTCTTCAATAAAATCTACTCGAACGAGCTGAGTTTCGCGAGGAAGTTAGGGTTAGGGATTGACGCGGTGAGGGAGGCTCCGGCGTTGGGGAATTTGAAGAGCGATTATGCTCAGGTGACGGCGTTTTATGGCTACTGGCTAGGTTTTTGTACGGTGATGGATTTCTGCTGGGTGGATCAGTATGACGTCATGGCGGGGCCGAATCGGAAGGTGAGGAGGTTGATGGAGGAGGATAATAAGAAGCAGAGGAAGAAGGCTAAGAGAGAGTATAATGACACCGTGCGGGGGTTGGCGGAGTTTGTGAAGAAGAGGGATAAGAGGGTGATGGATATGATGGTGAAGAGGGAGGAGGAGAGGGAGAGGAAGAAGAAGGAGGAGAGGGAGAAAAAGAAGAAGATGGACAAGGAGAAACTGGAGAGGGCTATGGCGTATGAGGAGCCGGAGTGGGCGAAAGCGGTCGAGGAGGAAGAGGAAGGGGATGACGAGGAGGAGGAGGAGAGGAAGAGGAATGAGTTGTATTGTGTGGTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAGTGGAAGAATCATGAGCAGTCAAAGAAGCATAAGGATAAGATTGCGGAGTTCAGGGAGTCGATTGGGGATGAGGAGCTTGATGAACAGGAAGTGGATGATTTAGGTGACCAAATGAGGGAGGGTTTGGAGATTGGGGAGGAGGATGATGGGGCTGGAGTGAGTGCCGGCGACGATGAGTTTTATGATTTTGGTGATGAAATTCTGAGGGAAAAGCTTGATGAGGATGACAATGGTGGTGGTGATGATGATGATGAAATGGAACTTCTTCAAGCAATGGCGGCCAGGCACAAGAGTAGGGAAAAGCTTGATGGTGATGGTGATGCTGATGCTGATGACGGTGAAATGGAACTTGATGATGAAATGGAACTTCTTCAAGCAATGGCGGCCAGGCACAAGAGTAGGGAAAAGCTTTATGGTGATGGTGATGGTGGTGATGATGACGGTGAAATGCTAAAAGCAATGGCAGCCAGGCAGAAGAGTAGGGAAAATGTTGGTGAAGCAGTTGGAGTTGATGATGGTGATAGTGGGAGCGAGGATGAAATGGATGTTCTTGAAGCATTGGTGGCAGGGCGAAAGAGTAGGAAAAATGCAGCTTCAAGGGCTGAGGTTGAGGATCCCTTGGTGACCGGTGTTCATGTGGATAATGATAGCAATGGTGTAGAGTCCATTCCTATGGAATATGAGAATCGGAAGCCCACCAGAAGGAAAGGGAAGAGCAAGAAGAGTGGTGGAGAAACTAAAAGGGTTGATATGAATGAAATTAGTAATGGTCAAAGTGAGGCAGCTAGTGAAAATGATAATTCAGATGTAAAGGAATCCACATCTGATTCTATGGTAGAAAACGCGAGTACTAACGAAAAACCCAGAAAAAAGAAATCTTCGAAACAAACTGTTGAGAAGAAGAAAGAGAACGTGAAGAAAGAGGCCAACGGCAAATCAAAGAGCTCCTCCAAAGGGAAGAAAGCTAAGGCAACATCAAAGAATTCTAGCAATGCATGTGAGGCATGTGGAGAGGAGTTTGGATCAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ zf-C2H2_jaz

Protein Analysis

650

Amino Acids

73.35

Weight (kDa)

4.96

Isoelectric Point (pI)

41.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 6 - 71 7.3e-22 DnaJ domain
ZUO1-like_ZHD PF21884 120 - 229 7.7e-21 Zuotin-like, zuotin homology domain
zf-C2H2_jaz PF12171 293 - 318 1.6e-10 Zinc-finger double-stranded RNA-binding
zf-met PF12874 293 - 317 1.9e-08 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 366, 552
AccB1I GGYRCC 1 cut(s) 12
AccBSI CCGCTC 2 cut(s) 7, 222
AccI GTMKAC 2 cut(s) 36, 354
AccII CGCG 4 cut(s) 42, 401, 428, 1766
AclWI GGATC 6 cut(s) 223, 236, 546, 1529, 1542, 1951
AcoI YGGCCR 3 cut(s) 163, 1200, 1305
AcsI RAATTY 3 cut(s) 454, 1119, 1903
AcuI CTGAAG 1 cut(s) 274
AcyI GRCGYC 5 cut(s) 33, 123, 138, 363, 549
AfaI GTAC 4 cut(s) 74, 209, 514, 1771
AfiI CCNNNNNNNGG 7 cut(s) 22, 154, 449, 648, 1036, 1623, 1875
AgeI ACCGGT 1 cut(s) 1547
AgsI TTSAA 6 cut(s) 370, 460, 1190, 1295, 1475, 1518
AjnI CCWGG 6 cut(s) 129, 153, 203, 1202, 1307, 1388
AjuI GAANNNNNNNTTGG 2 cut(s) 134, 166
Alw21I GWGCWC 3 cut(s) 30, 162, 1868
Alw26I GTCTC 1 cut(s) 130
AlwI GGATC 6 cut(s) 223, 236, 546, 1529, 1542, 1951
AoxI GGCC 6 cut(s) 132, 163, 560, 1200, 1305, 1845
ApeKI GCWGC 5 cut(s) 45, 91, 1385, 1511, 1703
ApoI RAATTY 3 cut(s) 454, 1119, 1903
AsiGI ACCGGT 1 cut(s) 1547
Asp700I GAANNNNTTC 2 cut(s) 1185, 1290
AspLEI GCGC 1 cut(s) 96
AspS9I GGNCC 2 cut(s) 178, 560
AsuII TTCGAA 1 cut(s) 1802
AvaII GGWCC 1 cut(s) 178
BamHI GGATCC 1 cut(s) 1534
BanI GGYRCC 1 cut(s) 12
BanII GRGCYC 2 cut(s) 162, 1868
BbsI GAAGAC 2 cut(s) 304, 358
Bbv12I GWGCWC 3 cut(s) 30, 162, 1868
BbvCI CCTCAGC 1 cut(s) 1524
BbvI GCAGC 5 cut(s) 32, 103, 1397, 1523, 1715
BceAI ACGGC 2 cut(s) 498, 1867
BciT130I CCWGG 6 cut(s) 131, 155, 205, 1204, 1309, 1390
BcoDI GTCTC 1 cut(s) 130
BfaI CTAG 3 cut(s) 503, 1707, 1908
BfmI CTRYAG 1 cut(s) 89
BfoI RGCGCY 1 cut(s) 97
BmcAI AGTACT 1 cut(s) 1771
Bme1390I CCNGG 6 cut(s) 131, 155, 205, 1204, 1309, 1390
Bme18I GGWCC 1 cut(s) 178
BmgT120I GGNCC 2 cut(s) 178, 560
BmiI GGNNCC 5 cut(s) 14, 441, 561, 801, 1536
BmrFI CCNGG 6 cut(s) 131, 155, 205, 1204, 1309, 1390
BmrI ACTGGG 1 cut(s) 142
BmsI GCATC 2 cut(s) 1231, 1237
BmuI ACTGGG 1 cut(s) 142
BpiI GAAGAC 2 cut(s) 304, 358
BplI GAGNNNNNCTC 4 cut(s) 167, 199, 424, 456
BpmI CTGGAG 2 cut(s) 797, 1095
Bpu10I CCTNAGC 3 cut(s) 474, 1524, 1887
Bpu14I TTCGAA 1 cut(s) 1802
BsaHI GRCGYC 5 cut(s) 33, 123, 138, 363, 549
BsaJI CCNNGG 4 cut(s) 40, 129, 192, 1539
BsaWI WCCGGW 2 cut(s) 75, 1547
BsaXI ACNNNNNCTCC 5 cut(s) 26, 314, 344, 791, 821
Bsc4I CCNNNNNNNGG 7 cut(s) 22, 154, 449, 648, 1036, 1623, 1875
Bse118I RCCGGY 3 cut(s) 119, 1085, 1547
Bse1I ACTGG 3 cut(s) 148, 503, 780
Bse3DI GCAATG 5 cut(s) 1200, 1305, 1386, 1579, 1918
BseBI CCWGG 6 cut(s) 131, 155, 205, 1204, 1309, 1390
BseDI CCNNGG 4 cut(s) 40, 129, 192, 1539
BseGI GGATG 9 cut(s) 111, 276, 847, 994, 1021, 1069, 1150, 1462, 1471
BseLI CCNNNNNNNGG 7 cut(s) 22, 154, 449, 648, 1036, 1623, 1875
BseMI GCAATG 5 cut(s) 1200, 1305, 1386, 1579, 1918
BseMII CTCAG 4 cut(s) 383, 488, 1115, 1515
BseNI ACTGG 3 cut(s) 148, 503, 780
BseXI GCAGC 5 cut(s) 32, 103, 1397, 1523, 1715
BseYI CCCAGC 1 cut(s) 531
BsgI GTGCAG 1 cut(s) 31
Bsh1236I CGCG 4 cut(s) 42, 401, 428, 1766
Bsh1285I CGRYCG 2 cut(s) 40, 822
BshFI GGCC 6 cut(s) 134, 165, 562, 1202, 1307, 1847
BshNI GGYRCC 1 cut(s) 12
BshTI ACCGGT 1 cut(s) 1547
BsiEI CGRYCG 2 cut(s) 40, 822
BsiHKAI GWGCWC 3 cut(s) 30, 162, 1868
BsiSI CCGG 8 cut(s) 76, 120, 318, 333, 443, 803, 1086, 1548
BslFI GGGAC 1 cut(s) 248
BslI CCNNNNNNNGG 7 cut(s) 22, 154, 449, 648, 1036, 1623, 1875
BsmAI GTCTC 1 cut(s) 130
BsmBI CGTCTC 1 cut(s) 130
BsmFI GGGAC 1 cut(s) 248
BsnI GGCC 6 cut(s) 134, 165, 562, 1202, 1307, 1847
Bsp119I TTCGAA 1 cut(s) 1802
Bsp1286I GDGCHC 3 cut(s) 30, 162, 1868
Bsp143I GATC 6 cut(s) 60, 228, 241, 538, 1534, 1943
Bsp68I TCGCGA 1 cut(s) 401
BspANI GGCC 6 cut(s) 134, 165, 562, 1202, 1307, 1847
BspCNI CTCAG 4 cut(s) 384, 487, 1116, 1516
BspFNI CGCG 4 cut(s) 42, 401, 428, 1766
BspHI TCATGA 1 cut(s) 931
BspLI GGNNCC 5 cut(s) 14, 441, 561, 801, 1536
BspMAI CTGCAG 1 cut(s) 93
BspPI GGATC 6 cut(s) 223, 236, 546, 1529, 1542, 1951
BspQI GCTCTTC 2 cut(s) 455, 1628
BspT104I TTCGAA 1 cut(s) 1802
BspT107I GGYRCC 1 cut(s) 12
BsrBI CCGCTC 2 cut(s) 7, 222
BsrDI GCAATG 5 cut(s) 1200, 1305, 1386, 1579, 1918
BsrFI RCCGGY 3 cut(s) 119, 1085, 1547
BsrI ACTGG 3 cut(s) 148, 503, 780
BssAI RCCGGY 3 cut(s) 119, 1085, 1547
BssECI CCNNGG 4 cut(s) 40, 129, 192, 1539
BssMI GATC 6 cut(s) 60, 228, 241, 538, 1534, 1943
BssNI GRCGYC 5 cut(s) 33, 123, 138, 363, 549
BssT1I CCWWGG 2 cut(s) 192, 1539
Bst2UI CCWGG 6 cut(s) 131, 155, 205, 1204, 1309, 1390
Bst4CI ACNGT 6 cut(s) 310, 517, 643, 1259, 1364, 1813
BstACI GRCGYC 5 cut(s) 33, 123, 138, 363, 549
BstBI TTCGAA 1 cut(s) 1802
BstC8I GCNNGC 3 cut(s) 84, 201, 1087
BstDEI CTNAG 6 cut(s) 392, 474, 621, 1124, 1524, 1887
BstDSI CCRYGG 1 cut(s) 40
BstEII GGTNACC 2 cut(s) 1025, 1543
BstF5I GGATG 9 cut(s) 111, 276, 847, 994, 1021, 1069, 1150, 1462, 1471
BstFNI CGCG 4 cut(s) 42, 401, 428, 1766
BstH2I RGCGCY 1 cut(s) 97
BstHHI GCGC 1 cut(s) 96
BstKTI GATC 6 cut(s) 63, 231, 244, 541, 1537, 1946
BstMAI GTCTC 1 cut(s) 130
BstMBI GATC 6 cut(s) 60, 228, 241, 538, 1534, 1943
BstMCI CGRYCG 2 cut(s) 40, 822
BstMWI GCNNNNNNNGC 8 cut(s) 39, 88, 1199, 1304, 1385, 1484, 1520, 1922
BstNI CCWGG 6 cut(s) 131, 155, 205, 1204, 1309, 1390
BstNSI RCATGY 2 cut(s) 1920, 1929
BstPI GGTNACC 2 cut(s) 1025, 1543
BstSCI CCNGG 6 cut(s) 129, 153, 203, 1202, 1307, 1388
BstSFI CTRYAG 1 cut(s) 89
BstUI CGCG 4 cut(s) 42, 401, 428, 1766
BstV1I GCAGC 5 cut(s) 32, 103, 1397, 1523, 1715
BstV2I GAAGAC 2 cut(s) 304, 358
BstX2I RGATCY 2 cut(s) 228, 1534
BstXI CCANNNNNNTGG 1 cut(s) 1594
BstYI RGATCY 2 cut(s) 228, 1534
BsuRI GGCC 6 cut(s) 134, 165, 562, 1202, 1307, 1847
BtgI CCRYGG 1 cut(s) 40
BtsCI GGATG 9 cut(s) 111, 276, 847, 994, 1021, 1069, 1150, 1462, 1471
BtsI GCAGTG 1 cut(s) 926
BtsIMutI CAGTG 1 cut(s) 926
BtuMI TCGCGA 1 cut(s) 401
Cac8I GCNNGC 3 cut(s) 84, 201, 1087
CciI TCATGA 1 cut(s) 931
CfoI GCGC 1 cut(s) 96
Cfr10I RCCGGY 3 cut(s) 119, 1085, 1547
Cfr13I GGNCC 2 cut(s) 178, 560
Cfr42I CCGCGG 1 cut(s) 43
CseI GACGC 4 cut(s) 22, 112, 146, 434
Csp6I GTAC 4 cut(s) 73, 208, 513, 1770
CspAI ACCGGT 1 cut(s) 1547
CspCI CAANNNNNGTGG 4 cut(s) 1138, 1173, 1627, 1662
CviAII CATG 5 cut(s) 553, 932, 1556, 1917, 1926
CviQI GTAC 4 cut(s) 73, 208, 513, 1770
DdeI CTNAG 6 cut(s) 392, 474, 621, 1124, 1524, 1887
DpnI GATC 6 cut(s) 62, 230, 243, 540, 1536, 1945
DpnII GATC 6 cut(s) 60, 228, 241, 538, 1534, 1943
EaeI YGGCCR 3 cut(s) 163, 1200, 1305
EciI GGCGGA 2 cut(s) 238, 671
Ecl136II GAGCTC 2 cut(s) 160, 1866
Eco130I CCWWGG 2 cut(s) 192, 1539
Eco24I GRGCYC 2 cut(s) 162, 1868
Eco47I GGWCC 1 cut(s) 178
Eco53kI GAGCTC 2 cut(s) 160, 1866
Eco57I CTGAAG 1 cut(s) 274
Eco91I GGTNACC 2 cut(s) 1025, 1543
EcoICRI GAGCTC 2 cut(s) 160, 1866
EcoO109I RGGNCCY 1 cut(s) 178
EcoO65I GGTNACC 2 cut(s) 1025, 1543
EcoRI GAATTC 1 cut(s) 1903
EcoRII CCWGG 6 cut(s) 129, 153, 203, 1202, 1307, 1388
EcoT14I CCWWGG 2 cut(s) 192, 1539
EcoT22I ATGCAT 1 cut(s) 1918
EcoT38I GRGCYC 2 cut(s) 162, 1868
ErhI CCWWGG 2 cut(s) 192, 1539
Esp3I CGTCTC 1 cut(s) 130
FaeI CATG 5 cut(s) 556, 935, 1559, 1920, 1929
FaqI GGGAC 1 cut(s) 248
FatI CATG 5 cut(s) 552, 931, 1555, 1916, 1925
FauI CCCGC 2 cut(s) 550, 639
FblI GTMKAC 2 cut(s) 36, 354
FokI GGATG 9 cut(s) 98, 263, 854, 1001, 1028, 1076, 1157, 1469, 1478
FriOI GRGCYC 2 cut(s) 162, 1868
FspBI CTAG 3 cut(s) 503, 1707, 1908
GlaI GCGC 1 cut(s) 95
GsaI CCCAGC 1 cut(s) 535
GsuI CTGGAG 2 cut(s) 797, 1095
HaeII RGCGCY 1 cut(s) 97
HaeIII GGCC 6 cut(s) 134, 165, 562, 1202, 1307, 1847
HapII CCGG 8 cut(s) 76, 120, 318, 333, 443, 803, 1086, 1548
HgaI GACGC 4 cut(s) 22, 112, 146, 434
HhaI GCGC 1 cut(s) 96
Hin1I GRCGYC 5 cut(s) 33, 123, 138, 363, 549
Hin1II CATG 5 cut(s) 556, 935, 1559, 1920, 1929
Hin6I GCGC 1 cut(s) 94
HinP1I GCGC 1 cut(s) 94
HincII GTYRAC 1 cut(s) 37
HindII GTYRAC 1 cut(s) 37
HindIII AAGCTT 3 cut(s) 1133, 1223, 1328
HpaII CCGG 8 cut(s) 76, 120, 318, 333, 443, 803, 1086, 1548
Hpy166II GTNNAC 2 cut(s) 37, 355
Hpy188I TCNGA 7 cut(s) 187, 328, 570, 1125, 1611, 1726, 1747
Hpy188III TCNNGA 3 cut(s) 400, 932, 1472
Hpy8I GTNNAC 2 cut(s) 37, 355
Hpy99I CGWCG 5 cut(s) 38, 59, 140, 365, 1094
HpyAV CCTTC 5 cut(s) 565, 610, 727, 830, 1617
HpyCH4III ACNGT 6 cut(s) 310, 517, 643, 1259, 1364, 1813
HpyCH4IV ACGT 3 cut(s) 363, 549, 1833
HpyCH4V TGCA 4 cut(s) 48, 91, 1511, 1916
HpyF10VI GCNNNNNNNGC 8 cut(s) 39, 88, 1199, 1304, 1385, 1484, 1520, 1922
HpyF3I CTNAG 6 cut(s) 392, 474, 621, 1124, 1524, 1887
HpySE526I ACGT 3 cut(s) 363, 549, 1833
Hsp92I GRCGYC 5 cut(s) 33, 123, 138, 363, 549
Hsp92II CATG 5 cut(s) 556, 935, 1559, 1920, 1929
HspAI GCGC 1 cut(s) 94
KroI GCCGGC 1 cut(s) 1085
KroNI GCCGGC 1 cut(s) 1087
KspI CCGCGG 1 cut(s) 43
Kzo9I GATC 6 cut(s) 60, 228, 241, 538, 1534, 1943
LguI GCTCTTC 2 cut(s) 455, 1628
LmnI GCTCC 9 cut(s) 4, 157, 196, 227, 445, 799, 994, 1449, 1871
Lsp1109I GCAGC 5 cut(s) 32, 103, 1397, 1523, 1715
LweI GCATC 2 cut(s) 1231, 1237
MaeI CTAG 3 cut(s) 503, 1707, 1908
MaeII ACGT 3 cut(s) 363, 549, 1833
MaeIII GTNAC 3 cut(s) 478, 1025, 1543
MalI GATC 6 cut(s) 62, 230, 243, 540, 1536, 1945
MbiI CCGCTC 2 cut(s) 7, 222
MboI GATC 6 cut(s) 60, 228, 241, 538, 1534, 1943
MflI RGATCY 2 cut(s) 228, 1534
MhlI GDGCHC 3 cut(s) 30, 162, 1868
MluCI AATT 5 cut(s) 454, 1119, 1680, 1720, 1903
MlyI GAGTC 5 cut(s) 206, 263, 323, 986, 1592
MmeI TCCRAC 3 cut(s) 210, 351, 1405
Mph1103I ATGCAT 1 cut(s) 1918
MroNI GCCGGC 1 cut(s) 1085
MroXI GAANNNNTTC 2 cut(s) 1185, 1290
MseI TTAA 1 cut(s) 906
MslI CAYNNNNRTG 1 cut(s) 1592
MspA1I CMGCKG 1 cut(s) 42
MspI CCGG 8 cut(s) 76, 120, 318, 333, 443, 803, 1086, 1548
MspR9I CCNGG 6 cut(s) 131, 155, 205, 1204, 1309, 1390
MvaI CCWGG 6 cut(s) 131, 155, 205, 1204, 1309, 1390
MvnI CGCG 4 cut(s) 42, 401, 428, 1766
MwoI GCNNNNNNNGC 8 cut(s) 39, 88, 1199, 1304, 1385, 1484, 1520, 1922
NaeI GCCGGC 1 cut(s) 1087
NdeII GATC 6 cut(s) 60, 228, 241, 538, 1534, 1943
NgoMIV GCCGGC 1 cut(s) 1085
NlaIII CATG 5 cut(s) 556, 935, 1559, 1920, 1929
NlaIV GGNNCC 5 cut(s) 14, 441, 561, 801, 1536
NmeAIII GCCGAG 2 cut(s) 9, 141
NmuCI GTSAC 3 cut(s) 478, 1025, 1543
NruI TCGCGA 1 cut(s) 401
NsiI ATGCAT 1 cut(s) 1918
NspI RCATGY 2 cut(s) 1920, 1929
NspV TTCGAA 1 cut(s) 1802
PagI TCATGA 1 cut(s) 931
PciSI GCTCTTC 2 cut(s) 455, 1628
PdiI GCCGGC 1 cut(s) 1087
PdmI GAANNNNTTC 2 cut(s) 1185, 1290
PfeI GAWTC 5 cut(s) 565, 928, 1606, 1736, 1748
PflFI GACNNNGTC 1 cut(s) 272
PfoI TCCNGGA 1 cut(s) 153
PinAI ACCGGT 1 cut(s) 1547
PleI GAGTC 5 cut(s) 206, 263, 323, 985, 1591
PpsI GAGTC 5 cut(s) 206, 263, 323, 985, 1591
PpuMI RGGWCCY 1 cut(s) 178
Psp124BI GAGCTC 2 cut(s) 162, 1868
Psp5II RGGWCCY 1 cut(s) 178
Psp6I CCWGG 6 cut(s) 129, 153, 203, 1202, 1307, 1388
PspEI GGTNACC 2 cut(s) 1025, 1543
PspFI CCCAGC 1 cut(s) 531
PspGI CCWGG 6 cut(s) 129, 153, 203, 1202, 1307, 1388
PspN4I GGNNCC 5 cut(s) 14, 441, 561, 801, 1536
PspPI GGNCC 2 cut(s) 178, 560
PspPPI RGGWCCY 1 cut(s) 178
PstI CTGCAG 1 cut(s) 93
PsuI RGATCY 2 cut(s) 228, 1534
PsyI GACNNNGTC 1 cut(s) 272
RruI TCGCGA 1 cut(s) 401
RsaI GTAC 4 cut(s) 74, 209, 514, 1771
RsaNI GTAC 4 cut(s) 73, 208, 513, 1770
RseI CAYNNNNRTG 1 cut(s) 1592
SacI GAGCTC 2 cut(s) 162, 1868
SacII CCGCGG 1 cut(s) 43
SalI GTCGAC 1 cut(s) 35
SapI GCTCTTC 2 cut(s) 455, 1628
SaqAI TTAA 1 cut(s) 906
Sau3AI GATC 6 cut(s) 60, 228, 241, 538, 1534, 1943
Sau96I GGNCC 2 cut(s) 178, 560
ScaI AGTACT 1 cut(s) 1771
SchI GAGTC 5 cut(s) 206, 263, 323, 986, 1592
ScrFI CCNGG 6 cut(s) 131, 155, 205, 1204, 1309, 1390
SduI GDGCHC 3 cut(s) 30, 162, 1868
SfaNI GCATC 2 cut(s) 1231, 1237
SfcI CTRYAG 1 cut(s) 89
Sfr303I CCGCGG 1 cut(s) 43
SfuI TTCGAA 1 cut(s) 1802
SgrAI CRCCGGYG 1 cut(s) 119
SgrBI CCGCGG 1 cut(s) 43
SinI GGWCC 1 cut(s) 178
SmiMI CAYNNNNRTG 1 cut(s) 1592
Sse9I AATT 5 cut(s) 454, 1119, 1680, 1720, 1903
SspMI CTAG 3 cut(s) 503, 1707, 1908
SstI GAGCTC 2 cut(s) 162, 1868
StyD4I CCNGG 6 cut(s) 129, 153, 203, 1202, 1307, 1388
StyI CCWWGG 2 cut(s) 192, 1539
TaaI ACNGT 6 cut(s) 310, 517, 643, 1259, 1364, 1813
TaiI ACGT 3 cut(s) 366, 552, 1836
TaqI TCGA 5 cut(s) 36, 383, 822, 980, 1802
TasI AATT 5 cut(s) 454, 1119, 1680, 1720, 1903
TatI WGTACW 1 cut(s) 1769
TauI GCSGC 5 cut(s) 10, 45, 254, 1202, 1307
TfiI GAWTC 5 cut(s) 565, 928, 1606, 1736, 1748
Tru1I TTAA 1 cut(s) 906
Tru9I TTAA 1 cut(s) 906
TscAI CASTG 1 cut(s) 926
TseFI GTSAC 3 cut(s) 478, 1025, 1543
TseI GCWGC 5 cut(s) 45, 91, 1385, 1511, 1703
Tsp45I GTSAC 3 cut(s) 478, 1025, 1543
TspDTI ATGAA 8 cut(s) 1017, 1131, 1188, 1293, 1473, 1544, 1688, 1692
TspGWI ACGGA 2 cut(s) 250, 262
TspRI CASTG 1 cut(s) 926
Tth111I GACNNNGTC 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 178
XapI RAATTY 3 cut(s) 454, 1119, 1903
XceI RCATGY 2 cut(s) 1920, 1929
XmiI GTMKAC 2 cut(s) 36, 354
XmnI GAANNNNTTC 2 cut(s) 1185, 1290
XspI CTAG 3 cut(s) 503, 1707, 1908
ZraI GACGTC 2 cut(s) 364, 550
ZrmI AGTACT 1 cut(s) 1771
Zsp2I ATGCAT 1 cut(s) 1918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.