Rh7BG054900

dnaJ homolog subfamily C member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0010033
Physical Location & Seq
Reverse (-)
3682192 .. 3685154
2963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG054900.1

Sequence Viewer

Length: 1911 bp
ATGGAGCGGCGGTGCCACTACGAGGTGCTCGGCGTCGACCGCGGCTGCACCGCCGACGAGATCAAGTCGGCGTACCGGAAACTCGCCCTGCAGCGCCACCCCGACAAGCTCATCCCCACCGGCGTCTCCCAGGCCGACGCCAACGCCCAGTTCCAGGAGCTCGGCCACGCCTACGAGGTCCTCTCCGACCCCAAGGAGCGAGCCTGGTACGACTCCCACCGCTCCCAGATCCTCTTCACCGATCCCTCCGCCGCCAACTCCGTCCCCGACTCCGTCATCCCCAACCTCTTCAGCTTCTTCTCCACCACCGTCTTCTCCGGCTACTCCGACTCCGGCAAGGGCTTCTACAAGGTCTACGCCGACGTCTTCAACAAAATCTACTCGAACGAGCTGAGCTTCGCGAGGAAGTTAGGGTTAGGGATCGACGCCGTGAGGGAGGCTCCGGCGTTGGGGAATTTGAAGAGCGATTATGCTCAGGTGACGGCGTTCTATGGCTACTGGCTAGGTTTTTGTACGGTGATGGATTTCTGCTGGGTGGATCAGTATGACGTCATGGCGGGGCCGAATCGGAAGGTGAGGAGGTTGATGGAGGAGGATAATAAGAAGCAGAGGAAGAAGGCTAAGAGAGAGTATAATGACACTGTGCGGGGGTTGGCGGAGTTTGTGAAGAAGAGGGATAAGAGGGTGATGGATATGATGGTGAAGAGGGAGGAGGAGAGGGAGAGGAGGAAGAAGGAGGAGAGGGAGAAGAAGAAGAAGATGGAGAAGGAGAAACTGGAGAGGGCTATGGCGTATGAGGAGCCGGAGTGGGCGAAAGCGGTCGAGGAGGAAGAGGAAGGGGATGAGGAGGAGGAGGAGGAGGAGAGGAAGAGGAATGAGTTGTATTGTGTGGTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAGTGGAAGAATCATGAGCAGTCAAAGAAGCATAAGGATAAGATTGCGGAGTTCAGGGAGTCGATTGGGGATGAAGAGGAAGTGGATGATTTAGGTGAGCAAATGAGGGAGGGTTTGGAGATTGGGGAGGAGGATGATGGGGCTGGAGTGAGTGCCGGCGAGGATGAGTTTTATGATTTTGGTGATGAAATTCTGAGGGAAGAGCTTGATGATGAGGATGATAATGGTGGTGGTGATGATGATGATGATGAAATGGAACTTCTTCAAGCAATGGCGGCCAGGCACAAGAGTAGGGAAAAGCTTGATGATGATGGTGATGATGACGACGGTGAAATGGAACTTCTAAAAGCAATGGCAGCCAGGCACAAGAGTAGGGAAAATGTTGGTGAAGCAGTTGGAGTTGATGATGGTGATAGTGGGAGCGAGGATGAAATGGATGTTCTTGAAGCAATGGTGGCAGGGCGAAAGAGTAGGAAAAATGCAGCTTCAAGGGTTGAGGTTGAGGATCCCTTGGTGGCCGGTGTTCATGTGGATAATGATAGCAATGGTGTAGAGTCCATTTCTATGGAATATGAGAATCGGAAGCCCACCAGAAGGAAAGGGAAGAGTAAGAAGAGTGGTGGAGAAACTAAAAGGGTCGATATGAATGAAATTAGTAATGGTCAAAGTGAGGCAGCTAGTGAAAATGATAATTCAGATATAAAGGAATCCACATCTGATTCTATGGTGGAAACTGCGAGTACTAACGAAAAACAGGATGATCAAATAGCCAGAAAGAAGAAATCTTCAAAACAATCTGTTGAGAAGAAGAAAGAGAATGTGAAGAAAGAGGCGAACGGCAAATCAAAGAGCTCCTCCAAAGGGAAGAAAGCTAAGGCAACGTCAAAGAATTCTAGCAATGCATGTGAGGCATGTGGAGAGGAGTTTGGATCAAGGAATCAATTACATAAGCATTTAGGTGACACCGGACATGCTTCACTGAAGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ zf-C2H2_jaz

Protein Analysis

636

Amino Acids

72.08

Weight (kDa)

5.07

Isoelectric Point (pI)

46.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 6 - 71 7.1e-22 DnaJ domain
ZUO1-like_ZHD PF21884 120 - 229 7.5e-21 Zuotin-like, zuotin homology domain
zf-C2H2_jaz PF12171 294 - 319 1.6e-10 Zinc-finger double-stranded RNA-binding
zf-met PF12874 294 - 318 1.8e-08 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 366, 552
AccB1I GGYRCC 1 cut(s) 12
AccBSI CCGCTC 2 cut(s) 7, 222
AccI GTMKAC 2 cut(s) 36, 354
AccII CGCG 2 cut(s) 42, 401
AclWI GGATC 7 cut(s) 223, 236, 428, 546, 1421, 1434, 1858
AcoI YGGCCR 3 cut(s) 163, 1197, 1437
AcsI RAATTY 3 cut(s) 454, 1110, 1810
AcuI CTGAAG 1 cut(s) 274
AcyI GRCGYC 6 cut(s) 33, 123, 138, 363, 426, 549
AfaI GTAC 4 cut(s) 74, 209, 514, 1663
AfiI CCNNNNNNNGG 5 cut(s) 22, 154, 449, 1515, 1782
AgsI TTSAA 6 cut(s) 370, 460, 1187, 1367, 1410, 1710
AjnI CCWGG 5 cut(s) 129, 153, 203, 1199, 1280
AjuI GAANNNNNNNTTGG 2 cut(s) 134, 166
Alw21I GWGCWC 3 cut(s) 30, 162, 1775
Alw26I GTCTC 1 cut(s) 130
AlwI GGATC 7 cut(s) 223, 236, 428, 546, 1421, 1434, 1858
AoxI GGCC 5 cut(s) 132, 163, 560, 1197, 1437
ApeKI GCWGC 5 cut(s) 45, 91, 1277, 1403, 1595
ApoI RAATTY 3 cut(s) 454, 1110, 1810
Asp700I GAANNNNTTC 1 cut(s) 1182
AspLEI GCGC 1 cut(s) 96
AspS9I GGNCC 2 cut(s) 178, 560
AvaII GGWCC 1 cut(s) 178
BamHI GGATCC 1 cut(s) 1426
BanI GGYRCC 1 cut(s) 12
BanII GRGCYC 2 cut(s) 162, 1775
BbsI GAAGAC 2 cut(s) 304, 358
Bbv12I GWGCWC 3 cut(s) 30, 162, 1775
BbvI GCAGC 5 cut(s) 32, 103, 1289, 1415, 1607
BccI CCATC 8 cut(s) 514, 580, 682, 691, 754, 1052, 1226, 1322
BceAI ACGGC 3 cut(s) 413, 498, 1774
BciT130I CCWGG 5 cut(s) 131, 155, 205, 1201, 1282
BclI TGATCA 1 cut(s) 1681
BcoDI GTCTC 1 cut(s) 130
BfaI CTAG 3 cut(s) 503, 1599, 1815
BfmI CTRYAG 1 cut(s) 89
BfoI RGCGCY 1 cut(s) 97
BisI GCNGC 9 cut(s) 8, 43, 46, 92, 252, 1197, 1278, 1404, 1596
BlpI GCTNAGC 1 cut(s) 392
BlsI GCNGC 9 cut(s) 9, 44, 47, 93, 253, 1198, 1279, 1405, 1597
BmcAI AGTACT 1 cut(s) 1663
Bme1390I CCNGG 5 cut(s) 131, 155, 205, 1201, 1282
Bme18I GGWCC 1 cut(s) 178
BmgT120I GGNCC 2 cut(s) 178, 560
BmiI GGNNCC 5 cut(s) 14, 441, 561, 801, 1428
BmrFI CCNGG 5 cut(s) 131, 155, 205, 1201, 1282
BmrI ACTGGG 1 cut(s) 142
BmuI ACTGGG 1 cut(s) 142
BpiI GAAGAC 2 cut(s) 304, 358
BplI GAGNNNNNCTC 4 cut(s) 167, 199, 424, 456
BpmI CTGGAG 2 cut(s) 797, 1086
Bpu10I CCTNAGC 2 cut(s) 474, 1794
Bpu1102I GCTNAGC 1 cut(s) 392
BsaHI GRCGYC 6 cut(s) 33, 123, 138, 363, 426, 549
BsaJI CCNNGG 4 cut(s) 40, 129, 192, 1431
BsaWI WCCGGW 2 cut(s) 75, 1886
BsaXI ACNNNNNCTCC 5 cut(s) 26, 314, 344, 791, 821
Bsc4I CCNNNNNNNGG 5 cut(s) 22, 154, 449, 1515, 1782
Bse118I RCCGGY 3 cut(s) 119, 1076, 1439
Bse1I ACTGG 3 cut(s) 148, 503, 780
Bse3DI GCAATG 5 cut(s) 1197, 1278, 1377, 1471, 1825
BseBI CCWGG 5 cut(s) 131, 155, 205, 1201, 1282
BseDI CCNNGG 4 cut(s) 40, 129, 192, 1431
BseLI CCNNNNNNNGG 5 cut(s) 22, 154, 449, 1515, 1782
BseMI GCAATG 5 cut(s) 1197, 1278, 1377, 1471, 1825
BseMII CTCAG 3 cut(s) 383, 488, 1106
BseNI ACTGG 3 cut(s) 148, 503, 780
BseXI GCAGC 5 cut(s) 32, 103, 1289, 1415, 1607
BseYI CCCAGC 1 cut(s) 531
BsgI GTGCAG 1 cut(s) 31
Bsh1236I CGCG 2 cut(s) 42, 401
Bsh1285I CGRYCG 2 cut(s) 40, 822
BshFI GGCC 5 cut(s) 134, 165, 562, 1199, 1439
BshNI GGYRCC 1 cut(s) 12
BsiEI CGRYCG 2 cut(s) 40, 822
BsiHKAI GWGCWC 3 cut(s) 30, 162, 1775
BsiSI CCGG 9 cut(s) 76, 120, 318, 333, 443, 803, 1077, 1440, 1887
BslFI GGGAC 1 cut(s) 248
BslI CCNNNNNNNGG 5 cut(s) 22, 154, 449, 1515, 1782
BsmAI GTCTC 1 cut(s) 130
BsmBI CGTCTC 1 cut(s) 130
BsmFI GGGAC 1 cut(s) 248
BsnI GGCC 5 cut(s) 134, 165, 562, 1199, 1439
Bsp1286I GDGCHC 3 cut(s) 30, 162, 1775
Bsp143I GATC 8 cut(s) 60, 228, 241, 420, 538, 1426, 1681, 1850
Bsp1720I GCTNAGC 1 cut(s) 392
Bsp68I TCGCGA 1 cut(s) 401
BspANI GGCC 5 cut(s) 134, 165, 562, 1199, 1439
BspCNI CTCAG 3 cut(s) 384, 487, 1107
BspFNI CGCG 2 cut(s) 42, 401
BspHI TCATGA 1 cut(s) 934
BspLI GGNNCC 5 cut(s) 14, 441, 561, 801, 1428
BspMAI CTGCAG 1 cut(s) 93
BspPI GGATC 7 cut(s) 223, 236, 428, 546, 1421, 1434, 1858
BspQI GCTCTTC 2 cut(s) 455, 1116
BspT107I GGYRCC 1 cut(s) 12
BsrBI CCGCTC 2 cut(s) 7, 222
BsrDI GCAATG 5 cut(s) 1197, 1278, 1377, 1471, 1825
BsrFI RCCGGY 3 cut(s) 119, 1076, 1439
BsrI ACTGG 3 cut(s) 148, 503, 780
BssAI RCCGGY 3 cut(s) 119, 1076, 1439
BssECI CCNNGG 4 cut(s) 40, 129, 192, 1431
BssMI GATC 8 cut(s) 60, 228, 241, 420, 538, 1426, 1681, 1850
BssNI GRCGYC 6 cut(s) 33, 123, 138, 363, 426, 549
BssT1I CCWWGG 2 cut(s) 192, 1431
Bst2UI CCWGG 5 cut(s) 131, 155, 205, 1201, 1282
Bst4CI ACNGT 4 cut(s) 310, 517, 643, 1250
BstACI GRCGYC 6 cut(s) 33, 123, 138, 363, 426, 549
BstC8I GCNNGC 2 cut(s) 201, 1078
BstDEI CTNAG 5 cut(s) 392, 474, 621, 1115, 1794
BstDSI CCRYGG 1 cut(s) 40
BstFNI CGCG 2 cut(s) 42, 401
BstH2I RGCGCY 1 cut(s) 97
BstHHI GCGC 1 cut(s) 96
BstKTI GATC 8 cut(s) 63, 231, 244, 423, 541, 1429, 1684, 1853
BstMAI GTCTC 1 cut(s) 130
BstMBI GATC 8 cut(s) 60, 228, 241, 420, 538, 1426, 1681, 1850
BstMCI CGRYCG 2 cut(s) 40, 822
BstMWI GCNNNNNNNGC 5 cut(s) 39, 1196, 1277, 1376, 1829
BstNI CCWGG 5 cut(s) 131, 155, 205, 1201, 1282
BstNSI RCATGY 3 cut(s) 1827, 1836, 1895
BstSCI CCNGG 5 cut(s) 129, 153, 203, 1199, 1280
BstSFI CTRYAG 1 cut(s) 89
BstUI CGCG 2 cut(s) 42, 401
BstV1I GCAGC 5 cut(s) 32, 103, 1289, 1415, 1607
BstV2I GAAGAC 2 cut(s) 304, 358
BstX2I RGATCY 2 cut(s) 228, 1426
BstXI CCANNNNNNTGG 1 cut(s) 1486
BstYI RGATCY 2 cut(s) 228, 1426
BsuRI GGCC 5 cut(s) 134, 165, 562, 1199, 1439
BtgI CCRYGG 1 cut(s) 40
BtsI GCAGTG 1 cut(s) 929
BtsIMutI CAGTG 3 cut(s) 639, 929, 1898
BtuMI TCGCGA 1 cut(s) 401
Cac8I GCNNGC 2 cut(s) 201, 1078
CciI TCATGA 1 cut(s) 934
CfoI GCGC 1 cut(s) 96
Cfr10I RCCGGY 3 cut(s) 119, 1076, 1439
Cfr13I GGNCC 2 cut(s) 178, 560
Cfr42I CCGCGG 1 cut(s) 43
CseI GACGC 4 cut(s) 22, 112, 146, 434
Csp6I GTAC 4 cut(s) 73, 208, 513, 1662
CviAII CATG 6 cut(s) 553, 935, 1448, 1824, 1833, 1892
CviQI GTAC 4 cut(s) 73, 208, 513, 1662
DdeI CTNAG 5 cut(s) 392, 474, 621, 1115, 1794
DpnI GATC 8 cut(s) 62, 230, 243, 422, 540, 1428, 1683, 1852
DpnII GATC 8 cut(s) 60, 228, 241, 420, 538, 1426, 1681, 1850
EaeI YGGCCR 3 cut(s) 163, 1197, 1437
EciI GGCGGA 2 cut(s) 238, 671
Ecl136II GAGCTC 2 cut(s) 160, 1773
Eco130I CCWWGG 2 cut(s) 192, 1431
Eco24I GRGCYC 2 cut(s) 162, 1775
Eco47I GGWCC 1 cut(s) 178
Eco53kI GAGCTC 2 cut(s) 160, 1773
Eco57I CTGAAG 1 cut(s) 274
EcoICRI GAGCTC 2 cut(s) 160, 1773
EcoO109I RGGNCCY 1 cut(s) 178
EcoRI GAATTC 1 cut(s) 1810
EcoRII CCWGG 5 cut(s) 129, 153, 203, 1199, 1280
EcoT14I CCWWGG 2 cut(s) 192, 1431
EcoT22I ATGCAT 1 cut(s) 1825
EcoT38I GRGCYC 2 cut(s) 162, 1775
ErhI CCWWGG 2 cut(s) 192, 1431
Esp3I CGTCTC 1 cut(s) 130
FaeI CATG 6 cut(s) 556, 938, 1451, 1827, 1836, 1895
FaqI GGGAC 1 cut(s) 248
FatI CATG 6 cut(s) 552, 934, 1447, 1823, 1832, 1891
FauI CCCGC 2 cut(s) 550, 639
FbaI TGATCA 1 cut(s) 1681
FblI GTMKAC 2 cut(s) 36, 354
Fnu4HI GCNGC 9 cut(s) 8, 43, 46, 92, 252, 1197, 1278, 1404, 1596
FriOI GRGCYC 2 cut(s) 162, 1775
Fsp4HI GCNGC 9 cut(s) 8, 43, 46, 92, 252, 1197, 1278, 1404, 1596
FspBI CTAG 3 cut(s) 503, 1599, 1815
GlaI GCGC 1 cut(s) 95
GluI GCNGC 9 cut(s) 8, 43, 46, 92, 252, 1197, 1278, 1404, 1596
GsaI CCCAGC 1 cut(s) 535
GsuI CTGGAG 2 cut(s) 797, 1086
HaeII RGCGCY 1 cut(s) 97
HaeIII GGCC 5 cut(s) 134, 165, 562, 1199, 1439
HapII CCGG 9 cut(s) 76, 120, 318, 333, 443, 803, 1077, 1440, 1887
HgaI GACGC 4 cut(s) 22, 112, 146, 434
HhaI GCGC 1 cut(s) 96
Hin1I GRCGYC 6 cut(s) 33, 123, 138, 363, 426, 549
Hin1II CATG 6 cut(s) 556, 938, 1451, 1827, 1836, 1895
Hin6I GCGC 1 cut(s) 94
HinP1I GCGC 1 cut(s) 94
HincII GTYRAC 1 cut(s) 37
HindII GTYRAC 1 cut(s) 37
HindIII AAGCTT 1 cut(s) 1220
HpaII CCGG 9 cut(s) 76, 120, 318, 333, 443, 803, 1077, 1440, 1887
Hpy166II GTNNAC 2 cut(s) 37, 355
Hpy188I TCNGA 7 cut(s) 187, 328, 570, 1116, 1503, 1618, 1639
Hpy188III TCNNGA 3 cut(s) 400, 935, 1364
Hpy8I GTNNAC 2 cut(s) 37, 355
Hpy99I CGWCG 6 cut(s) 38, 59, 140, 365, 428, 1250
HpyAV CCTTC 6 cut(s) 565, 610, 727, 760, 830, 1509
HpyCH4III ACNGT 4 cut(s) 310, 517, 643, 1250
HpyCH4IV ACGT 3 cut(s) 363, 549, 1802
HpyCH4V TGCA 4 cut(s) 48, 91, 1403, 1823
HpyF10VI GCNNNNNNNGC 5 cut(s) 39, 1196, 1277, 1376, 1829
HpyF3I CTNAG 5 cut(s) 392, 474, 621, 1115, 1794
HpySE526I ACGT 3 cut(s) 363, 549, 1802
Hsp92I GRCGYC 6 cut(s) 33, 123, 138, 363, 426, 549
Hsp92II CATG 6 cut(s) 556, 938, 1451, 1827, 1836, 1895
HspAI GCGC 1 cut(s) 94
KroI GCCGGC 1 cut(s) 1076
KroNI GCCGGC 1 cut(s) 1078
Ksp22I TGATCA 1 cut(s) 1681
KspI CCGCGG 1 cut(s) 43
Kzo9I GATC 8 cut(s) 60, 228, 241, 420, 538, 1426, 1681, 1850
LguI GCTCTTC 2 cut(s) 455, 1116
LmnI GCTCC 8 cut(s) 4, 157, 196, 227, 445, 799, 1341, 1778
Lsp1109I GCAGC 5 cut(s) 32, 103, 1289, 1415, 1607
MaeI CTAG 3 cut(s) 503, 1599, 1815
MaeII ACGT 3 cut(s) 363, 549, 1802
MaeIII GTNAC 2 cut(s) 478, 1880
MalI GATC 8 cut(s) 62, 230, 243, 422, 540, 1428, 1683, 1852
MbiI CCGCTC 2 cut(s) 7, 222
MboI GATC 8 cut(s) 60, 228, 241, 420, 538, 1426, 1681, 1850
MflI RGATCY 2 cut(s) 228, 1426
MhlI GDGCHC 3 cut(s) 30, 162, 1775
MluCI AATT 6 cut(s) 454, 1110, 1572, 1612, 1810, 1862
MlyI GAGTC 5 cut(s) 206, 263, 323, 989, 1484
MmeI TCCRAC 3 cut(s) 210, 351, 1297
Mph1103I ATGCAT 1 cut(s) 1825
MroNI GCCGGC 1 cut(s) 1076
MroXI GAANNNNTTC 1 cut(s) 1182
MseI TTAA 1 cut(s) 909
MslI CAYNNNNRTG 2 cut(s) 1484, 1878
MspA1I CMGCKG 1 cut(s) 42
MspI CCGG 9 cut(s) 76, 120, 318, 333, 443, 803, 1077, 1440, 1887
MspR9I CCNGG 5 cut(s) 131, 155, 205, 1201, 1282
MvaI CCWGG 5 cut(s) 131, 155, 205, 1201, 1282
MvnI CGCG 2 cut(s) 42, 401
MwoI GCNNNNNNNGC 5 cut(s) 39, 1196, 1277, 1376, 1829
NaeI GCCGGC 1 cut(s) 1078
NdeII GATC 8 cut(s) 60, 228, 241, 420, 538, 1426, 1681, 1850
NgoMIV GCCGGC 1 cut(s) 1076
NlaIII CATG 6 cut(s) 556, 938, 1451, 1827, 1836, 1895
NlaIV GGNNCC 5 cut(s) 14, 441, 561, 801, 1428
NmeAIII GCCGAG 2 cut(s) 9, 141
NmuCI GTSAC 2 cut(s) 478, 1880
NruI TCGCGA 1 cut(s) 401
NsiI ATGCAT 1 cut(s) 1825
NspI RCATGY 3 cut(s) 1827, 1836, 1895
PagI TCATGA 1 cut(s) 934
PciSI GCTCTTC 2 cut(s) 455, 1116
PdiI GCCGGC 1 cut(s) 1078
PdmI GAANNNNTTC 1 cut(s) 1182
PfeI GAWTC 6 cut(s) 565, 931, 1498, 1628, 1640, 1858
PflFI GACNNNGTC 1 cut(s) 272
PfoI TCCNGGA 1 cut(s) 153
PkrI GCNGC 9 cut(s) 9, 44, 47, 93, 253, 1198, 1279, 1405, 1597
PleI GAGTC 5 cut(s) 206, 263, 323, 988, 1483
PpsI GAGTC 5 cut(s) 206, 263, 323, 988, 1483
PpuMI RGGWCCY 1 cut(s) 178
Psp124BI GAGCTC 2 cut(s) 162, 1775
Psp5II RGGWCCY 1 cut(s) 178
Psp6I CCWGG 5 cut(s) 129, 153, 203, 1199, 1280
PspFI CCCAGC 1 cut(s) 531
PspGI CCWGG 5 cut(s) 129, 153, 203, 1199, 1280
PspN4I GGNNCC 5 cut(s) 14, 441, 561, 801, 1428
PspPI GGNCC 2 cut(s) 178, 560
PspPPI RGGWCCY 1 cut(s) 178
PstI CTGCAG 1 cut(s) 93
PsuI RGATCY 2 cut(s) 228, 1426
PsyI GACNNNGTC 1 cut(s) 272
RruI TCGCGA 1 cut(s) 401
RsaI GTAC 4 cut(s) 74, 209, 514, 1663
RsaNI GTAC 4 cut(s) 73, 208, 513, 1662
RseI CAYNNNNRTG 2 cut(s) 1484, 1878
SacI GAGCTC 2 cut(s) 162, 1775
SacII CCGCGG 1 cut(s) 43
SalI GTCGAC 1 cut(s) 35
SapI GCTCTTC 2 cut(s) 455, 1116
SaqAI TTAA 1 cut(s) 909
SatI GCNGC 9 cut(s) 8, 43, 46, 92, 252, 1197, 1278, 1404, 1596
Sau3AI GATC 8 cut(s) 60, 228, 241, 420, 538, 1426, 1681, 1850
Sau96I GGNCC 2 cut(s) 178, 560
ScaI AGTACT 1 cut(s) 1663
SchI GAGTC 5 cut(s) 206, 263, 323, 989, 1484
ScrFI CCNGG 5 cut(s) 131, 155, 205, 1201, 1282
SduI GDGCHC 3 cut(s) 30, 162, 1775
SfcI CTRYAG 1 cut(s) 89
Sfr303I CCGCGG 1 cut(s) 43
SgrAI CRCCGGYG 1 cut(s) 119
SgrBI CCGCGG 1 cut(s) 43
SinI GGWCC 1 cut(s) 178
SmiMI CAYNNNNRTG 2 cut(s) 1484, 1878
Sse9I AATT 6 cut(s) 454, 1110, 1572, 1612, 1810, 1862
SspMI CTAG 3 cut(s) 503, 1599, 1815
SstI GAGCTC 2 cut(s) 162, 1775
StyD4I CCNGG 5 cut(s) 129, 153, 203, 1199, 1280
StyI CCWWGG 2 cut(s) 192, 1431
TaaI ACNGT 4 cut(s) 310, 517, 643, 1250
TaiI ACGT 3 cut(s) 366, 552, 1805
TaqI TCGA 6 cut(s) 36, 383, 423, 822, 983, 1560
TasI AATT 6 cut(s) 454, 1110, 1572, 1612, 1810, 1862
TatI WGTACW 1 cut(s) 1661
TauI GCSGC 4 cut(s) 10, 45, 254, 1199
TfiI GAWTC 6 cut(s) 565, 931, 1498, 1628, 1640, 1858
Tru1I TTAA 1 cut(s) 909
Tru9I TTAA 1 cut(s) 909
TscAI CASTG 3 cut(s) 646, 929, 1905
TseFI GTSAC 2 cut(s) 478, 1880
TseI GCWGC 5 cut(s) 45, 91, 1277, 1403, 1595
Tsp45I GTSAC 2 cut(s) 478, 1880
TspDTI ATGAA 7 cut(s) 1008, 1122, 1185, 1365, 1436, 1580, 1584
TspGWI ACGGA 2 cut(s) 250, 262
TspRI CASTG 3 cut(s) 646, 929, 1905
Tth111I GACNNNGTC 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 178
XapI RAATTY 3 cut(s) 454, 1110, 1810
XceI RCATGY 3 cut(s) 1827, 1836, 1895
XmiI GTMKAC 2 cut(s) 36, 354
XmnI GAANNNNTTC 1 cut(s) 1182
XspI CTAG 3 cut(s) 503, 1599, 1815
ZraI GACGTC 2 cut(s) 364, 550
ZrmI AGTACT 1 cut(s) 1663
Zsp2I ATGCAT 1 cut(s) 1825
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.