Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0010033

Physical Location & Seq

Genomic Coordinates Reverse (-)

4126410 .. 4129959

Gene Structure 3550 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG056200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGGAGCGGCGGTGCCACTACGATGTGCTGGGCGTGGACCGCGGCTGCACCGCCGACGAGATCAAGTCGGCGTACCGGAAACTCGCCCTGCAGCGCCACCCCGACAAGCTCATCCCCACCGGCGTCTCCCAGGCCGACGCCAACGCCCAGTTCCAGGAGCTCGGCCACGCCTACGAGGTGCTCTCCGACCCCAAGGAGCGAGCCTGGTACGACTCCCACCGCTCCCAGATCCTCTTCGCCGATCCCTCCGCGGCCAACTCCGTCCCCGACTCCGTCATCCCCAACCTCTTCAGCTTCTTCTCCACCACCGTCTTCTCCGGCTACTCCGACTCCGGCAAGGGCTTCTACAAGGTCTACGCCGACGTCTTCAATAAAATCTACTCGAACGAGCTGAGTTTCGCGAGGAAGTTAGGGTTAGGGATTGACGCCGTGAGGGAGGCTCCGGCGTTGGGGAATTTGAAGAGCGATTATGCTCAGGTGACGGCGTTTTATGGCTACTGGCTAGGTTTTTGTACGGTGATGGATTTCTGCTGGGTGGATCAGTATGACGTCATGGCGGGGCCGAATCGGAAGGTGAGGAGGTTGATGGAGGAGGATAATAAGAAGCAGAGGAAGAAGGCTAAGAGAGAGTATAATGACACTGTGCGGGGGTTGGCGGAGTTTGTGAAGAAGAGGGATAAGAGGGTGATGGATATGATGGTGAAGAGGGAGGAGGAGAGGGAGAGGAAGAAGAAGGAGGAGAGGGAGAAAAAGAAGAAGATGGACAAGGAGAAACTGGAGAGGGCTATGGCGTATGAGGAGCCGGAGTGGGCAAAAGCGGTCGAGGAGGAAGAGGAAGGGGATGAGGAGGAGGAGGAGAGGAAGAGGAATGAGTTGTATTGTGTGGTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAGTGGAAGAATCATGAGCAGTCAAAGAAGCATAAGGATAAGATTGCGGAGTTCAGGGAGTCGATTGGGGATGAAGAGCTTGATGAAGAGGAAGTGGATGATTTAGGTGACCAAATGAGGGAGGGTTTGGAGATTGGGGCTGGAGTGAGTGCCAGCGACGATGAGTTTTATGATTTTGGTGATGAAATTCTGAGGGAGAAGCTTGATGATGATGATAATGGTGGTGGTGGTGATGATGATGAAATGGAACTTCTTCAAGCAATGGCGGCCAGGCACAAGAGTAGGGAAAAGCTTGATGCTGATGATGATGACGGTGAAATGGAACTTGATGATGAAATGGAACTTCTTCAAGCAATGGCGGCCAGGCACAAGAGTAGGGAAAAGCTTTATGGTGATGGTGATGGTGGTGATGATGACGGTGAAATGGAACTTCTAAAAGCAATGGCAGCCAGGCAGAAGAGTAGGGAAAATGTTGGTGAAGCAGTTGGAGTTGATGATGGTGATAGTGGGAGCGAGGATGAAATGGATGTTCTTGAAGCATTGGTGGCAGGGCGAAAGAGTAGGAAAAATGCAGCTTCAAGGGTTGAGGTTGAGGATCCCTTGGTGACCGGTGTTCATGTGGATAATGATAGCAATGGTGTAGAGTCCATTCCTATGGAATATGAGAATCGGAAGCCCACCAGAAGGAAAGGGAAGAGTAAGAAGAGTGGTGGAGAAACTAAAAGGGTCGATATGAATGAAATTAGTAATGGTCAAAGTGAGGCAGCTAGTGAAAATGATAATTCAGATGTAAAGGAATCCACATCTGATTCTATGGTGGAAATGGCGAGTACTAACGAAAAACAGGATGATCAAATAGCCAGAAAAAAGAAATCTTCGAAACAAACTGTTGAGAAGAAGAAAGAGAACGTGAAGAAAGAGGCCAACGGCAAATCAAAGAGCTCCTCCAAAGGGAAGAAAGCTAAGGCAACGTCAAAGAATTCTAGCAATGCATGTGAGGCATGTGGAGAGGAGTTTGGATCAAGGAATCAATTACATAAGCATTTAGGTGACACTGGACATGCTTCACTGAAGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ zf-C2H2_jaz

Protein Analysis

664

Amino Acids

75.08

Weight (kDa)

5.12

Isoelectric Point (pI)

42.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	6 - 71	8.1e-22	DnaJ domain
ZUO1-like_ZHD	PF21884	120 - 229	8e-21	Zuotin-like, zuotin homology domain
zf-C2H2_jaz	PF12171	292 - 317	1.7e-10	Zinc-finger double-stranded RNA-binding
zf-met	PF12874	292 - 316	1.9e-08	Zinc-finger of C2H2 type

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010033)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74250
fragaria_vesca	FvH4_5g13920
malus_domestica	MD06G1202400.v1.1 MD14G1211500.v1.1
prunus_persica	Prupe.5G204600_v2.0.a1 Prupe.5G204600_v2.0.a1 Prupe.5G204600_v2.0.a1
pyrus_communis	pycom06g17840 pycom14g17510
rosa_chinensis	RchiOBHm_Chr7g0183041
rosa_laevigata	RLG00000005085
rosa_multiflora	Rmu_sc0000014.1_g000005 Rmu_sc0021698.1_g000001 Rmu_ssc0000111.1_g000001
rosa_roxburghii	Rroxscaffold_3G00270820
rosa_rugosa	Rorug06G0452000
rosa_samantha	Rh7AG055500 Rh7BG054900 Rh7CG056200 Rh7DG055000
rosa_wichuraiana	Rw7G004510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	366, 552
AccB1I	GGYRCC	1 cut(s)	12
AccBSI	CCGCTC	2 cut(s)	7, 222
AccI	GTMKAC	1 cut(s)	354
AccII	CGCG	3 cut(s)	42, 251, 401
AclWI	GGATC	6 cut(s)	223, 236, 546, 1505, 1518, 1942
AcoI	YGGCCR	4 cut(s)	163, 252, 1182, 1275
AcsI	RAATTY	3 cut(s)	454, 1101, 1894
AcuI	CTGAAG	1 cut(s)	274
AcyI	GRCGYC	5 cut(s)	123, 138, 363, 426, 549
AfaI	GTAC	4 cut(s)	74, 209, 514, 1747
AfiI	CCNNNNNNNGG	5 cut(s)	154, 449, 1033, 1599, 1866
AgeI	ACCGGT	1 cut(s)	1523
AgsI	TTSAA	6 cut(s)	370, 460, 1172, 1265, 1451, 1494
AjnI	CCWGG	6 cut(s)	129, 153, 203, 1184, 1277, 1364
AjuI	GAANNNNNNNTTGG	2 cut(s)	134, 166
Alw21I	GWGCWC	3 cut(s)	162, 183, 1859
Alw26I	GTCTC	1 cut(s)	130
AlwI	GGATC	6 cut(s)	223, 236, 546, 1505, 1518, 1942
AoxI	GGCC	7 cut(s)	132, 163, 252, 560, 1182, 1275, 1836
ApeKI	GCWGC	5 cut(s)	45, 91, 1361, 1487, 1679
ApoI	RAATTY	3 cut(s)	454, 1101, 1894
AsiGI	ACCGGT	1 cut(s)	1523
Asp700I	GAANNNNTTC	2 cut(s)	1167, 1260
AspLEI	GCGC	1 cut(s)	96
AspS9I	GGNCC	2 cut(s)	37, 560
AsuII	TTCGAA	1 cut(s)	1793
AvaII	GGWCC	1 cut(s)	37
BamHI	GGATCC	1 cut(s)	1510
BanI	GGYRCC	1 cut(s)	12
BanII	GRGCYC	2 cut(s)	162, 1859
BbsI	GAAGAC	2 cut(s)	304, 358
Bbv12I	GWGCWC	3 cut(s)	162, 183, 1859
BbvI	GCAGC	5 cut(s)	32, 103, 1373, 1499, 1691
BccI	CCATC	8 cut(s)	514, 580, 682, 691, 754, 1304, 1310, 1406
BceAI	ACGGC	3 cut(s)	413, 498, 1858
BciT130I	CCWGG	6 cut(s)	131, 155, 205, 1186, 1279, 1366
BclI	TGATCA	1 cut(s)	1765
BcoDI	GTCTC	1 cut(s)	130
BfaI	CTAG	3 cut(s)	503, 1683, 1899
BfmI	CTRYAG	1 cut(s)	89
BfoI	RGCGCY	1 cut(s)	97
BmcAI	AGTACT	1 cut(s)	1747
Bme1390I	CCNGG	6 cut(s)	131, 155, 205, 1186, 1279, 1366
Bme18I	GGWCC	1 cut(s)	37
BmgT120I	GGNCC	2 cut(s)	37, 560
BmiI	GGNNCC	5 cut(s)	14, 441, 561, 801, 1512
BmrFI	CCNGG	6 cut(s)	131, 155, 205, 1186, 1279, 1366
BmrI	ACTGGG	1 cut(s)	142
BmsI	GCATC	1 cut(s)	1201
BmuI	ACTGGG	1 cut(s)	142
BpiI	GAAGAC	2 cut(s)	304, 358
BplI	GAGNNNNNCTC	4 cut(s)	167, 199, 424, 456
BpmI	CTGGAG	2 cut(s)	797, 1077
Bpu10I	CCTNAGC	2 cut(s)	474, 1878
Bpu14I	TTCGAA	1 cut(s)	1793
BsaHI	GRCGYC	5 cut(s)	123, 138, 363, 426, 549
BsaJI	CCNNGG	5 cut(s)	40, 129, 192, 249, 1515
BsaWI	WCCGGW	2 cut(s)	75, 1523
BsaXI	ACNNNNNCTCC	5 cut(s)	26, 314, 344, 791, 821
Bsc4I	CCNNNNNNNGG	5 cut(s)	154, 449, 1033, 1599, 1866
Bse118I	RCCGGY	2 cut(s)	119, 1523
Bse1I	ACTGG	4 cut(s)	148, 503, 780, 1975
Bse3DI	GCAATG	5 cut(s)	1182, 1275, 1362, 1555, 1909
BseBI	CCWGG	6 cut(s)	131, 155, 205, 1186, 1279, 1366
BseDI	CCNNGG	5 cut(s)	40, 129, 192, 249, 1515
BseGI	GGATG	8 cut(s)	111, 276, 847, 991, 1018, 1438, 1447, 1768
BseLI	CCNNNNNNNGG	5 cut(s)	154, 449, 1033, 1599, 1866
BseMI	GCAATG	5 cut(s)	1182, 1275, 1362, 1555, 1909
BseMII	CTCAG	3 cut(s)	383, 488, 1097
BseNI	ACTGG	4 cut(s)	148, 503, 780, 1975
BseXI	GCAGC	5 cut(s)	32, 103, 1373, 1499, 1691
BseYI	CCCAGC	2 cut(s)	28, 531
BsgI	GTGCAG	1 cut(s)	31
Bsh1236I	CGCG	3 cut(s)	42, 251, 401
Bsh1285I	CGRYCG	1 cut(s)	822
BshFI	GGCC	7 cut(s)	134, 165, 254, 562, 1184, 1277, 1838
BshNI	GGYRCC	1 cut(s)	12
BshTI	ACCGGT	1 cut(s)	1523
BsiEI	CGRYCG	1 cut(s)	822
BsiHKAI	GWGCWC	3 cut(s)	162, 183, 1859
BsiSI	CCGG	7 cut(s)	76, 120, 318, 333, 443, 803, 1524
BslFI	GGGAC	1 cut(s)	248
BslI	CCNNNNNNNGG	5 cut(s)	154, 449, 1033, 1599, 1866
BsmAI	GTCTC	1 cut(s)	130
BsmBI	CGTCTC	1 cut(s)	130
BsmFI	GGGAC	1 cut(s)	248
BsnI	GGCC	7 cut(s)	134, 165, 254, 562, 1184, 1277, 1838
Bsp119I	TTCGAA	1 cut(s)	1793
Bsp1286I	GDGCHC	3 cut(s)	162, 183, 1859
Bsp143I	GATC	7 cut(s)	60, 228, 241, 538, 1510, 1765, 1934
Bsp68I	TCGCGA	1 cut(s)	401
BspANI	GGCC	7 cut(s)	134, 165, 254, 562, 1184, 1277, 1838
BspCNI	CTCAG	3 cut(s)	384, 487, 1098
BspFNI	CGCG	3 cut(s)	42, 251, 401
BspHI	TCATGA	1 cut(s)	928
BspLI	GGNNCC	5 cut(s)	14, 441, 561, 801, 1512
BspMAI	CTGCAG	1 cut(s)	93
BspPI	GGATC	6 cut(s)	223, 236, 546, 1505, 1518, 1942
BspQI	GCTCTTC	2 cut(s)	455, 984
BspT104I	TTCGAA	1 cut(s)	1793
BspT107I	GGYRCC	1 cut(s)	12
BsrBI	CCGCTC	2 cut(s)	7, 222
BsrDI	GCAATG	5 cut(s)	1182, 1275, 1362, 1555, 1909
BsrFI	RCCGGY	2 cut(s)	119, 1523
BsrI	ACTGG	4 cut(s)	148, 503, 780, 1975
BssAI	RCCGGY	2 cut(s)	119, 1523
BssECI	CCNNGG	5 cut(s)	40, 129, 192, 249, 1515
BssMI	GATC	7 cut(s)	60, 228, 241, 538, 1510, 1765, 1934
BssNI	GRCGYC	5 cut(s)	123, 138, 363, 426, 549
BssT1I	CCWWGG	2 cut(s)	192, 1515
Bst2UI	CCWGG	6 cut(s)	131, 155, 205, 1186, 1279, 1366
Bst4CI	ACNGT	6 cut(s)	310, 517, 643, 1229, 1334, 1804
BstACI	GRCGYC	5 cut(s)	123, 138, 363, 426, 549
BstBI	TTCGAA	1 cut(s)	1793
BstC8I	GCNNGC	2 cut(s)	201, 1069
BstDEI	CTNAG	5 cut(s)	392, 474, 621, 1106, 1878
BstDSI	CCRYGG	2 cut(s)	40, 249
BstEII	GGTNACC	2 cut(s)	1022, 1519
BstF5I	GGATG	8 cut(s)	111, 276, 847, 991, 1018, 1438, 1447, 1768
BstFNI	CGCG	3 cut(s)	42, 251, 401
BstH2I	RGCGCY	1 cut(s)	97
BstHHI	GCGC	1 cut(s)	96
BstKTI	GATC	7 cut(s)	63, 231, 244, 541, 1513, 1768, 1937
BstMAI	GTCTC	1 cut(s)	130
BstMBI	GATC	7 cut(s)	60, 228, 241, 538, 1510, 1765, 1934
BstMCI	CGRYCG	1 cut(s)	822
BstMWI	GCNNNNNNNGC	6 cut(s)	39, 1181, 1274, 1361, 1460, 1913
BstNI	CCWGG	6 cut(s)	131, 155, 205, 1186, 1279, 1366
BstNSI	RCATGY	3 cut(s)	1911, 1920, 1979
BstPI	GGTNACC	2 cut(s)	1022, 1519
BstSCI	CCNGG	6 cut(s)	129, 153, 203, 1184, 1277, 1364
BstSFI	CTRYAG	1 cut(s)	89
BstUI	CGCG	3 cut(s)	42, 251, 401
BstV1I	GCAGC	5 cut(s)	32, 103, 1373, 1499, 1691
BstV2I	GAAGAC	2 cut(s)	304, 358
BstX2I	RGATCY	2 cut(s)	228, 1510
BstXI	CCANNNNNNTGG	1 cut(s)	1570
BstYI	RGATCY	2 cut(s)	228, 1510
BsuRI	GGCC	7 cut(s)	134, 165, 254, 562, 1184, 1277, 1838
BtgI	CCRYGG	2 cut(s)	40, 249
BtsCI	GGATG	8 cut(s)	111, 276, 847, 991, 1018, 1438, 1447, 1768
BtsI	GCAGTG	1 cut(s)	923
BtsIMutI	CAGTG	4 cut(s)	639, 923, 1968, 1982
BtuMI	TCGCGA	1 cut(s)	401
Cac8I	GCNNGC	2 cut(s)	201, 1069
CciI	TCATGA	1 cut(s)	928
CfoI	GCGC	1 cut(s)	96
Cfr10I	RCCGGY	2 cut(s)	119, 1523
Cfr13I	GGNCC	2 cut(s)	37, 560
Cfr42I	CCGCGG	2 cut(s)	43, 252
CseI	GACGC	3 cut(s)	112, 146, 434
Csp6I	GTAC	4 cut(s)	73, 208, 513, 1746
CspAI	ACCGGT	1 cut(s)	1523
CviAII	CATG	6 cut(s)	553, 929, 1532, 1908, 1917, 1976
CviQI	GTAC	4 cut(s)	73, 208, 513, 1746
DdeI	CTNAG	5 cut(s)	392, 474, 621, 1106, 1878
DpnI	GATC	7 cut(s)	62, 230, 243, 540, 1512, 1767, 1936
DpnII	GATC	7 cut(s)	60, 228, 241, 538, 1510, 1765, 1934
EaeI	YGGCCR	4 cut(s)	163, 252, 1182, 1275
EciI	GGCGGA	1 cut(s)	671
Ecl136II	GAGCTC	2 cut(s)	160, 1857
Eco130I	CCWWGG	2 cut(s)	192, 1515
Eco24I	GRGCYC	2 cut(s)	162, 1859
Eco47I	GGWCC	1 cut(s)	37
Eco53kI	GAGCTC	2 cut(s)	160, 1857
Eco57I	CTGAAG	1 cut(s)	274
Eco91I	GGTNACC	2 cut(s)	1022, 1519
EcoICRI	GAGCTC	2 cut(s)	160, 1857
EcoO65I	GGTNACC	2 cut(s)	1022, 1519
EcoRI	GAATTC	1 cut(s)	1894
EcoRII	CCWGG	6 cut(s)	129, 153, 203, 1184, 1277, 1364
EcoT14I	CCWWGG	2 cut(s)	192, 1515
EcoT22I	ATGCAT	1 cut(s)	1909
EcoT38I	GRGCYC	2 cut(s)	162, 1859
ErhI	CCWWGG	2 cut(s)	192, 1515
Esp3I	CGTCTC	1 cut(s)	130
FaeI	CATG	6 cut(s)	556, 932, 1535, 1911, 1920, 1979
FaqI	GGGAC	1 cut(s)	248
FatI	CATG	6 cut(s)	552, 928, 1531, 1907, 1916, 1975
FauI	CCCGC	2 cut(s)	550, 639
FbaI	TGATCA	1 cut(s)	1765
FblI	GTMKAC	1 cut(s)	354
FokI	GGATG	8 cut(s)	98, 263, 854, 998, 1025, 1445, 1454, 1775
FriOI	GRGCYC	2 cut(s)	162, 1859
FspBI	CTAG	3 cut(s)	503, 1683, 1899
GlaI	GCGC	1 cut(s)	95
GsaI	CCCAGC	2 cut(s)	32, 535
GsuI	CTGGAG	2 cut(s)	797, 1077
HaeII	RGCGCY	1 cut(s)	97
HaeIII	GGCC	7 cut(s)	134, 165, 254, 562, 1184, 1277, 1838
HapII	CCGG	7 cut(s)	76, 120, 318, 333, 443, 803, 1524
HgaI	GACGC	3 cut(s)	112, 146, 434
HhaI	GCGC	1 cut(s)	96
Hin1I	GRCGYC	5 cut(s)	123, 138, 363, 426, 549
Hin1II	CATG	6 cut(s)	556, 932, 1535, 1911, 1920, 1979
Hin6I	GCGC	1 cut(s)	94
HinP1I	GCGC	1 cut(s)	94
HindIII	AAGCTT	3 cut(s)	1115, 1205, 1298
HpaII	CCGG	7 cut(s)	76, 120, 318, 333, 443, 803, 1524
Hpy166II	GTNNAC	2 cut(s)	37, 355
Hpy188I	TCNGA	7 cut(s)	187, 328, 570, 1107, 1587, 1702, 1723
Hpy188III	TCNNGA	3 cut(s)	400, 929, 1448
Hpy8I	GTNNAC	2 cut(s)	37, 355
Hpy99I	CGWCG	4 cut(s)	59, 140, 365, 1076
HpyAV	CCTTC	5 cut(s)	565, 610, 727, 830, 1593
HpyCH4III	ACNGT	6 cut(s)	310, 517, 643, 1229, 1334, 1804
HpyCH4IV	ACGT	4 cut(s)	363, 549, 1824, 1886
HpyCH4V	TGCA	4 cut(s)	48, 91, 1487, 1907
HpyF10VI	GCNNNNNNNGC	6 cut(s)	39, 1181, 1274, 1361, 1460, 1913
HpyF3I	CTNAG	5 cut(s)	392, 474, 621, 1106, 1878
HpySE526I	ACGT	4 cut(s)	363, 549, 1824, 1886
Hsp92I	GRCGYC	5 cut(s)	123, 138, 363, 426, 549
Hsp92II	CATG	6 cut(s)	556, 932, 1535, 1911, 1920, 1979
HspAI	GCGC	1 cut(s)	94
Ksp22I	TGATCA	1 cut(s)	1765
KspI	CCGCGG	2 cut(s)	43, 252
Kzo9I	GATC	7 cut(s)	60, 228, 241, 538, 1510, 1765, 1934
LguI	GCTCTTC	2 cut(s)	455, 984
LmnI	GCTCC	8 cut(s)	4, 157, 196, 227, 445, 799, 1425, 1862
Lsp1109I	GCAGC	5 cut(s)	32, 103, 1373, 1499, 1691
LweI	GCATC	1 cut(s)	1201
MaeI	CTAG	3 cut(s)	503, 1683, 1899
MaeII	ACGT	4 cut(s)	363, 549, 1824, 1886
MaeIII	GTNAC	4 cut(s)	478, 1022, 1519, 1964
MalI	GATC	7 cut(s)	62, 230, 243, 540, 1512, 1767, 1936
MbiI	CCGCTC	2 cut(s)	7, 222
MboI	GATC	7 cut(s)	60, 228, 241, 538, 1510, 1765, 1934
MflI	RGATCY	2 cut(s)	228, 1510
MhlI	GDGCHC	3 cut(s)	162, 183, 1859
MluCI	AATT	6 cut(s)	454, 1101, 1656, 1696, 1894, 1946
MlyI	GAGTC	5 cut(s)	206, 263, 323, 983, 1568
MmeI	TCCRAC	3 cut(s)	210, 351, 1381
Mph1103I	ATGCAT	1 cut(s)	1909
MroXI	GAANNNNTTC	2 cut(s)	1167, 1260
MseI	TTAA	1 cut(s)	903
MslI	CAYNNNNRTG	3 cut(s)	21, 1568, 1962
MspA1I	CMGCKG	2 cut(s)	42, 251
MspI	CCGG	7 cut(s)	76, 120, 318, 333, 443, 803, 1524
MspR9I	CCNGG	6 cut(s)	131, 155, 205, 1186, 1279, 1366
MvaI	CCWGG	6 cut(s)	131, 155, 205, 1186, 1279, 1366
MvnI	CGCG	3 cut(s)	42, 251, 401
MwoI	GCNNNNNNNGC	6 cut(s)	39, 1181, 1274, 1361, 1460, 1913
NdeII	GATC	7 cut(s)	60, 228, 241, 538, 1510, 1765, 1934
NlaIII	CATG	6 cut(s)	556, 932, 1535, 1911, 1920, 1979
NlaIV	GGNNCC	5 cut(s)	14, 441, 561, 801, 1512
NmeAIII	GCCGAG	1 cut(s)	141
NmuCI	GTSAC	4 cut(s)	478, 1022, 1519, 1964
NruI	TCGCGA	1 cut(s)	401
NsiI	ATGCAT	1 cut(s)	1909
NspI	RCATGY	3 cut(s)	1911, 1920, 1979
NspV	TTCGAA	1 cut(s)	1793
PagI	TCATGA	1 cut(s)	928
PciSI	GCTCTTC	2 cut(s)	455, 984
PdmI	GAANNNNTTC	2 cut(s)	1167, 1260
PfeI	GAWTC	6 cut(s)	565, 925, 1582, 1712, 1724, 1942
PflFI	GACNNNGTC	1 cut(s)	272
PfoI	TCCNGGA	1 cut(s)	153
PinAI	ACCGGT	1 cut(s)	1523
PleI	GAGTC	5 cut(s)	206, 263, 323, 982, 1567
PpsI	GAGTC	5 cut(s)	206, 263, 323, 982, 1567
Psp124BI	GAGCTC	2 cut(s)	162, 1859
Psp6I	CCWGG	6 cut(s)	129, 153, 203, 1184, 1277, 1364
PspEI	GGTNACC	2 cut(s)	1022, 1519
PspFI	CCCAGC	2 cut(s)	28, 531
PspGI	CCWGG	6 cut(s)	129, 153, 203, 1184, 1277, 1364
PspN4I	GGNNCC	5 cut(s)	14, 441, 561, 801, 1512
PspPI	GGNCC	2 cut(s)	37, 560
PstI	CTGCAG	1 cut(s)	93
PsuI	RGATCY	2 cut(s)	228, 1510
PsyI	GACNNNGTC	1 cut(s)	272
RruI	TCGCGA	1 cut(s)	401
RsaI	GTAC	4 cut(s)	74, 209, 514, 1747
RsaNI	GTAC	4 cut(s)	73, 208, 513, 1746
RseI	CAYNNNNRTG	3 cut(s)	21, 1568, 1962
SacI	GAGCTC	2 cut(s)	162, 1859
SacII	CCGCGG	2 cut(s)	43, 252
SapI	GCTCTTC	2 cut(s)	455, 984
SaqAI	TTAA	1 cut(s)	903
Sau3AI	GATC	7 cut(s)	60, 228, 241, 538, 1510, 1765, 1934
Sau96I	GGNCC	2 cut(s)	37, 560
ScaI	AGTACT	1 cut(s)	1747
SchI	GAGTC	5 cut(s)	206, 263, 323, 983, 1568
ScrFI	CCNGG	6 cut(s)	131, 155, 205, 1186, 1279, 1366
SduI	GDGCHC	3 cut(s)	162, 183, 1859
SfaNI	GCATC	1 cut(s)	1201
SfcI	CTRYAG	1 cut(s)	89
Sfr303I	CCGCGG	2 cut(s)	43, 252
SfuI	TTCGAA	1 cut(s)	1793
SgrAI	CRCCGGYG	1 cut(s)	119
SgrBI	CCGCGG	2 cut(s)	43, 252
SinI	GGWCC	1 cut(s)	37
SmiMI	CAYNNNNRTG	3 cut(s)	21, 1568, 1962
Sse9I	AATT	6 cut(s)	454, 1101, 1656, 1696, 1894, 1946
SspMI	CTAG	3 cut(s)	503, 1683, 1899
SstI	GAGCTC	2 cut(s)	162, 1859
StyD4I	CCNGG	6 cut(s)	129, 153, 203, 1184, 1277, 1364
StyI	CCWWGG	2 cut(s)	192, 1515
TaaI	ACNGT	6 cut(s)	310, 517, 643, 1229, 1334, 1804
TaiI	ACGT	4 cut(s)	366, 552, 1827, 1889
TaqI	TCGA	5 cut(s)	383, 822, 977, 1644, 1793
TasI	AATT	6 cut(s)	454, 1101, 1656, 1696, 1894, 1946
TatI	WGTACW	1 cut(s)	1745
TauI	GCSGC	5 cut(s)	10, 45, 254, 1184, 1277
TfiI	GAWTC	6 cut(s)	565, 925, 1582, 1712, 1724, 1942
Tru1I	TTAA	1 cut(s)	903
Tru9I	TTAA	1 cut(s)	903
TscAI	CASTG	4 cut(s)	646, 923, 1975, 1989
TseFI	GTSAC	4 cut(s)	478, 1022, 1519, 1964
TseI	GCWGC	5 cut(s)	45, 91, 1361, 1487, 1679
Tsp45I	GTSAC	4 cut(s)	478, 1022, 1519, 1964
TspDTI	ATGAA	9 cut(s)	1002, 1014, 1113, 1170, 1263, 1449, 1520, 1664, 1668
TspGWI	ACGGA	2 cut(s)	250, 262
TspRI	CASTG	4 cut(s)	646, 923, 1975, 1989
Tth111I	GACNNNGTC	1 cut(s)	272
VpaK11BI	GGWCC	1 cut(s)	37
XapI	RAATTY	3 cut(s)	454, 1101, 1894
XceI	RCATGY	3 cut(s)	1911, 1920, 1979
XmiI	GTMKAC	1 cut(s)	354
XmnI	GAANNNNTTC	2 cut(s)	1167, 1260
XspI	CTAG	3 cut(s)	503, 1683, 1899
ZraI	GACGTC	2 cut(s)	364, 550
ZrmI	AGTACT	1 cut(s)	1747
Zsp2I	ATGCAT	1 cut(s)	1909

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.