pycom14g17510

dnaJ homolog subfamily C member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
19417617 .. 19419301
1685 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g17510.5

Sequence Viewer

Length: 1410 bp
ATGGCGGCGTCGGAGAGGCGGTGCCACTACGAGGGTTTAGGTCTCCCCCGCGACTGCTCCGCCGACGAGATCCGGTCGTCTTACAGGAAGCTTGCTTTCCAGCGCCACCGGGACAAGCTACTCCAGTCCGGCTTGTCCCAGTCCGAAGCCACAGCCCAGTTCCAGGAGCTGGCCCATGCCTACGAGGTTCTCTCCGACCCCAAAGAGCGAGCTTGGTACGACTCTCACCGCTCCCAAATCCTCTTCTCCGATCGCAGATTGGCCGCGTCGAGCTCCGGCTCGGGCATCCCCGATCTCTTCTCATTCTTCTCCACAACCGTCTTCTCCGGGTTAGGGTTGGACACCGTGCCTGAAGCTCCGGCGATGGGGAATTTAGAGAGTCCGTACGTGCAGGTCACCGCGTTTTATAACTACTGGGCAGGGTTTTGTACGGTGATGGATTTTTGCTGGGAGGACAAGTATGACGTGATGGCCGGTCCGAACCGGAAGGCGAGGAGGTTTATGGAGGAGGAGAACAAGAAGGAGAGGAAGAAGGCAAAGAGAGAGTTCAACGAGACGGTGCGGGGGTTGGCGGATTTTGTGAAGAAGAGGGATAAGAGGGTGATTGATATGATGCTGAAGAAGGAGGAGGAGAGGTGGAGGAGGAGGAATTGTTGGAAGAATCACAAGCAGTCGAAGAAGCATCGAGATAAGGTTGCAGAGTATCGGGAGTCGATTGGAGAAGAAGATCGATCAATGACTAATTTGAACTTGATGATGAAGAGGTTTTGGAGGGAGAGGGTGAAGAAGGGGGGGTTGAAGATTGGGGAGGAGGAAGATGGGGCAGGAGTGAGTGATCAGGAGGATGAGTTGCATGAATTTGGTGCTGAAAATGGGAGCGAAAAGGTTGACGAGGCACTTGAGTTGGATGGTGATGAAGATGAATTGGGTGTTCTTGAAGCAATGGTGACTGGGCGAAAGAGTAAGAAAAATGCAGCCTTTTGGGTCGAGCGTGAGGATATCTTGGTGACCGATATTCGTGCGGAGAAGGATGACGATGACACGGGGTTCATGGAATATAATAACCGGAAGAGCGCAGGAAGGAAAGGAGGTGCGAGGAAAGAGAGGGGTAAGAAGAGTGGTGGTGAAGCTAATAATGTTGATAAAAGTGGAAACAACGGTGGTCAGAGTGACGAGAGTAATGAACAAGATAATTCAAATATGAAGGAATCCACATCTCATTCCGTTGTGCAAAATGAGAGTAATGATCAAGGGGATGAACAGATAGCACGAAAGAAGAAGAGGTCAAGCAAAGCCGTCGATAAGAAAGAGAAAGCGAAGAAAGAGGCGAACGACAAATTAAAGAACTCATCTAATGGGAAGAAATCTAAGGTAAAGTCCTTGCTTTTTATGCTTCATGAAATACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

470

Amino Acids

53.65

Weight (kDa)

8.05

Isoelectric Point (pI)

44.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 408
Acc36I ACCTGC 1 cut(s) 382
AccB1I GGYRCC 1 cut(s) 21
AccB7I CCANNNNNTGG 1 cut(s) 169
AccBSI CCGCTC 1 cut(s) 231
AccII CGCG 3 cut(s) 51, 266, 401
AclWI GGATC 1 cut(s) 64
AcoI YGGCCR 2 cut(s) 261, 471
AcsI RAATTY 2 cut(s) 370, 857
AcuI CTGAAG 2 cut(s) 372, 638
AcyI GRCGYC 1 cut(s) 8
AfaI GTAC 3 cut(s) 218, 386, 430
AfiI CCNNNNNNNGG 5 cut(s) 31, 163, 169, 333, 365
AgsI TTSAA 5 cut(s) 550, 748, 799, 938, 1197
AjiI CACGTC 1 cut(s) 466
AjnI CCWGG 1 cut(s) 162
AluBI AGCT 7 cut(s) 91, 118, 169, 212, 273, 356, 1130
AluI AGCT 7 cut(s) 91, 118, 169, 212, 273, 356, 1130
Alw21I GWGCWC 1 cut(s) 275
Alw26I GTCTC 2 cut(s) 47, 548
AlwI GGATC 1 cut(s) 64
AlwNI CAGNNNCTG 1 cut(s) 169
Ama87I CYCGRG 1 cut(s) 280
AoxI GGCC 3 cut(s) 171, 261, 471
ApeKI GCWGC 1 cut(s) 974
ApoI RAATTY 2 cut(s) 370, 857
AspLEI GCGC 2 cut(s) 105, 1076
AspS9I GGNCC 2 cut(s) 172, 476
AsuC2I CCSGG 2 cut(s) 110, 328
AsuHPI GGTGA 9 cut(s) 218, 388, 445, 613, 793, 923, 958, 1018, 1136
AvaI CYCGRG 1 cut(s) 280
AvaII GGWCC 1 cut(s) 476
BanI GGYRCC 1 cut(s) 21
BanII GRGCYC 1 cut(s) 275
BbsI GAAGAC 1 cut(s) 313
Bbv12I GWGCWC 1 cut(s) 275
BbvI GCAGC 1 cut(s) 986
BccI CCATC 5 cut(s) 358, 430, 463, 812, 902
BceAI ACGGC 1 cut(s) 1280
BcgI CGANNNNNNTGC 4 cut(s) 1001, 1035, 1279, 1313
BciT130I CCWGG 1 cut(s) 164
BclI TGATCA 2 cut(s) 835, 1246
BcnI CCSGG 2 cut(s) 110, 328
BcoDI GTCTC 2 cut(s) 47, 548
BfoI RGCGCY 1 cut(s) 106
BfuAI ACCTGC 1 cut(s) 382
BisI GCNGC 3 cut(s) 6, 264, 975
BlsI GCNGC 3 cut(s) 7, 265, 976
Bme1390I CCNGG 3 cut(s) 110, 164, 328
Bme18I GGWCC 1 cut(s) 476
BmeT110I CYCGRG 1 cut(s) 280
BmgBI CACGTC 1 cut(s) 466
BmgT120I GGNCC 2 cut(s) 172, 476
BmiI GGNNCC 1 cut(s) 23
BmrFI CCNGG 3 cut(s) 110, 164, 328
BmrI ACTGGG 4 cut(s) 133, 151, 424, 960
BmsI GCATC 3 cut(s) 294, 603, 691
BmuI ACTGGG 4 cut(s) 133, 151, 424, 960
BpiI GAAGAC 1 cut(s) 313
BplI GAGNNNNNCTC 2 cut(s) 176, 208
BpmI CTGGAG 1 cut(s) 107
BpuEI CTTGAG 1 cut(s) 920
BpuMI CCSGG 2 cut(s) 110, 328
Bsa29I ATCGAT 1 cut(s) 730
BsaAI YACGTR 1 cut(s) 388
BsaHI GRCGYC 1 cut(s) 8
BsaI GGTCTC 1 cut(s) 47
BsaWI WCCGGW 3 cut(s) 72, 483, 1065
Bsc4I CCNNNNNNNGG 5 cut(s) 31, 163, 169, 333, 365
Bse118I RCCGGY 1 cut(s) 473
Bse1I ACTGG 5 cut(s) 124, 139, 157, 419, 955
Bse3DI GCAATG 1 cut(s) 948
BseBI CCWGG 1 cut(s) 164
BseCI ATCGAT 1 cut(s) 730
BseGI GGATG 5 cut(s) 285, 850, 913, 1036, 1261
BseLI CCNNNNNNNGG 5 cut(s) 31, 163, 169, 333, 365
BseMI GCAATG 1 cut(s) 948
BseNI ACTGG 5 cut(s) 124, 139, 157, 419, 955
BseRI GAGGAG 8 cut(s) 508, 521, 524, 641, 644, 655, 658, 824
BseXI GCAGC 1 cut(s) 986
BseYI CCCAGC 1 cut(s) 447
BsgI GTGCAG 1 cut(s) 410
Bsh1236I CGCG 3 cut(s) 51, 266, 401
Bsh1285I CGRYCG 2 cut(s) 77, 253
BshFI GGCC 3 cut(s) 173, 263, 473
BshNI GGYRCC 1 cut(s) 21
BshVI ATCGAT 1 cut(s) 730
BsiEI CGRYCG 2 cut(s) 77, 253
BsiHKAI GWGCWC 1 cut(s) 275
BsiHKCI CYCGRG 1 cut(s) 280
BsiSI CCGG 9 cut(s) 73, 109, 129, 276, 327, 359, 474, 484, 1066
BsiWI CGTACG 1 cut(s) 384
BslFI GGGAC 2 cut(s) 121, 125
BslI CCNNNNNNNGG 5 cut(s) 31, 163, 169, 333, 365
BsmAI GTCTC 2 cut(s) 47, 548
BsmBI CGTCTC 1 cut(s) 548
BsmFI GGGAC 2 cut(s) 121, 125
BsnI GGCC 3 cut(s) 173, 263, 473
Bso31I GGTCTC 1 cut(s) 47
BsoBI CYCGRG 1 cut(s) 280
Bsp1286I GDGCHC 1 cut(s) 275
Bsp143I GATC 7 cut(s) 69, 250, 292, 727, 731, 835, 1246
BspANI GGCC 3 cut(s) 173, 263, 473
BspDI ATCGAT 1 cut(s) 730
BspFNI CGCG 3 cut(s) 51, 266, 401
BspHI TCATGA 1 cut(s) 1396
BspLI GGNNCC 1 cut(s) 23
BspMI ACCTGC 1 cut(s) 382
BspPI GGATC 1 cut(s) 64
BspQI GCTCTTC 1 cut(s) 1064
BspT107I GGYRCC 1 cut(s) 21
BspTNI GGTCTC 1 cut(s) 47
BsrBI CCGCTC 1 cut(s) 231
BsrDI GCAATG 1 cut(s) 948
BsrFI RCCGGY 1 cut(s) 473
BsrI ACTGG 5 cut(s) 124, 139, 157, 419, 955
BssAI RCCGGY 1 cut(s) 473
BssMI GATC 7 cut(s) 69, 250, 292, 727, 731, 835, 1246
BssNI GRCGYC 1 cut(s) 8
Bst2UI CCWGG 1 cut(s) 164
Bst4CI ACNGT 5 cut(s) 319, 346, 433, 559, 1160
Bst6I CTCTTC 7 cut(s) 248, 302, 581, 755, 1064, 1109, 1274
BstACI GRCGYC 1 cut(s) 8
BstBAI YACGTR 1 cut(s) 388
BstC8I GCNNGC 3 cut(s) 93, 171, 210
BstDEI CTNAG 1 cut(s) 1368
BstEII GGTNACC 2 cut(s) 394, 1006
BstF5I GGATG 5 cut(s) 285, 850, 913, 1036, 1261
BstFNI CGCG 3 cut(s) 51, 266, 401
BstH2I RGCGCY 1 cut(s) 106
BstHHI GCGC 2 cut(s) 105, 1076
BstKTI GATC 7 cut(s) 72, 253, 295, 730, 734, 838, 1249
BstMAI GTCTC 2 cut(s) 47, 548
BstMBI GATC 7 cut(s) 69, 250, 292, 727, 731, 835, 1246
BstMCI CGRYCG 2 cut(s) 77, 253
BstMWI GCNNNNNNNGC 1 cut(s) 1390
BstNI CCWGG 1 cut(s) 164
BstPI GGTNACC 2 cut(s) 394, 1006
BstSCI CCNGG 3 cut(s) 108, 162, 326
BstUI CGCG 3 cut(s) 51, 266, 401
BstV1I GCAGC 1 cut(s) 986
BstV2I GAAGAC 1 cut(s) 313
BstX2I RGATCY 1 cut(s) 69
BstYI RGATCY 1 cut(s) 69
Bsu15I ATCGAT 1 cut(s) 730
BsuRI GGCC 3 cut(s) 173, 263, 473
BsuTUI ATCGAT 1 cut(s) 730
BtgZI GCGATG 1 cut(s) 377
BtrI CACGTC 1 cut(s) 466
BtsCI GGATG 5 cut(s) 285, 850, 913, 1036, 1261
BveI ACCTGC 1 cut(s) 382
Cac8I GCNNGC 3 cut(s) 93, 171, 210
CaiI CAGNNNCTG 1 cut(s) 169
CciI TCATGA 1 cut(s) 1396
CfoI GCGC 2 cut(s) 105, 1076
Cfr10I RCCGGY 1 cut(s) 473
Cfr13I GGNCC 2 cut(s) 172, 476
ClaI ATCGAT 1 cut(s) 730
CpoI CGGWCCG 1 cut(s) 476
CseI GACGC 1 cut(s) 255
Csp6I GTAC 3 cut(s) 217, 385, 429
CspI CGGWCCG 1 cut(s) 476
CviAII CATG 4 cut(s) 176, 854, 1051, 1397
CviQI GTAC 3 cut(s) 217, 385, 429
DdeI CTNAG 1 cut(s) 1368
DpnI GATC 7 cut(s) 71, 252, 294, 729, 733, 837, 1248
DpnII GATC 7 cut(s) 69, 250, 292, 727, 731, 835, 1246
EaeI YGGCCR 2 cut(s) 261, 471
Eam1104I CTCTTC 7 cut(s) 248, 302, 581, 755, 1064, 1109, 1274
EarI CTCTTC 7 cut(s) 248, 302, 581, 755, 1064, 1109, 1274
EciI GGCGGA 2 cut(s) 49, 587
Ecl136II GAGCTC 1 cut(s) 273
Eco24I GRGCYC 1 cut(s) 275
Eco31I GGTCTC 1 cut(s) 47
Eco32I GATATC 1 cut(s) 1000
Eco47I GGWCC 1 cut(s) 476
Eco53kI GAGCTC 1 cut(s) 273
Eco57I CTGAAG 2 cut(s) 372, 638
Eco88I CYCGRG 1 cut(s) 280
Eco91I GGTNACC 2 cut(s) 394, 1006
EcoICRI GAGCTC 1 cut(s) 273
EcoO65I GGTNACC 2 cut(s) 394, 1006
EcoRII CCWGG 1 cut(s) 162
EcoRV GATATC 1 cut(s) 1000
EcoT38I GRGCYC 1 cut(s) 275
Esp3I CGTCTC 1 cut(s) 548
FaeI CATG 4 cut(s) 179, 857, 1054, 1400
FaqI GGGAC 2 cut(s) 121, 125
FatI CATG 4 cut(s) 175, 853, 1050, 1396
FauI CCCGC 2 cut(s) 56, 555
FbaI TGATCA 2 cut(s) 835, 1246
Fnu4HI GCNGC 3 cut(s) 6, 264, 975
FokI GGATG 5 cut(s) 272, 857, 920, 1043, 1268
FriOI GRGCYC 1 cut(s) 275
Fsp4HI GCNGC 3 cut(s) 6, 264, 975
GlaI GCGC 2 cut(s) 104, 1075
GluI GCNGC 3 cut(s) 6, 264, 975
GsaI CCCAGC 1 cut(s) 451
GsuI CTGGAG 1 cut(s) 107
HaeII RGCGCY 1 cut(s) 106
HaeIII GGCC 3 cut(s) 173, 263, 473
HapII CCGG 9 cut(s) 73, 109, 129, 276, 327, 359, 474, 484, 1066
HgaI GACGC 1 cut(s) 255
HhaI GCGC 2 cut(s) 105, 1076
Hin1I GRCGYC 1 cut(s) 8
Hin1II CATG 4 cut(s) 179, 857, 1054, 1400
Hin6I GCGC 2 cut(s) 103, 1074
HinP1I GCGC 2 cut(s) 103, 1074
HincII GTYRAC 1 cut(s) 889
HindII GTYRAC 1 cut(s) 889
HindIII AAGCTT 1 cut(s) 89
HinfI GANTC 5 cut(s) 221, 379, 661, 710, 1208
HpaII CCGG 9 cut(s) 73, 109, 129, 276, 327, 359, 474, 484, 1066
HphI GGTGA 9 cut(s) 218, 388, 445, 613, 793, 923, 958, 1018, 1136
Hpy166II GTNNAC 1 cut(s) 889
Hpy188I TCNGA 6 cut(s) 13, 145, 196, 250, 480, 1167
Hpy188III TCNNGA 5 cut(s) 686, 707, 839, 935, 1397
Hpy8I GTNNAC 1 cut(s) 889
Hpy99I CGWCG 4 cut(s) 13, 68, 271, 1301
HpyAV CCTTC 8 cut(s) 481, 514, 526, 616, 781, 1021, 1074, 1198
HpyCH4III ACNGT 5 cut(s) 319, 346, 433, 559, 1160
HpyCH4IV ACGT 2 cut(s) 387, 465
HpyCH4V TGCA 5 cut(s) 391, 698, 853, 974, 1231
HpyF10VI GCNNNNNNNGC 1 cut(s) 1390
HpyF3I CTNAG 1 cut(s) 1368
HpySE526I ACGT 2 cut(s) 387, 465
Hsp92I GRCGYC 1 cut(s) 8
Hsp92II CATG 4 cut(s) 179, 857, 1054, 1400
HspAI GCGC 2 cut(s) 103, 1074
Ksp22I TGATCA 2 cut(s) 835, 1246
Kzo9I GATC 7 cut(s) 69, 250, 292, 727, 731, 835, 1246
LguI GCTCTTC 1 cut(s) 1064
LmnI GCTCC 6 cut(s) 62, 166, 236, 278, 361, 876
Lsp1109I GCAGC 1 cut(s) 986
LweI GCATC 3 cut(s) 294, 603, 691
MaeII ACGT 2 cut(s) 387, 465
MaeIII GTNAC 4 cut(s) 394, 946, 1006, 1169
MalI GATC 7 cut(s) 71, 252, 294, 729, 733, 837, 1248
MbiI CCGCTC 1 cut(s) 231
MboI GATC 7 cut(s) 69, 250, 292, 727, 731, 835, 1246
MflI RGATCY 1 cut(s) 69
MhlI GDGCHC 1 cut(s) 275
MluCI AATT 7 cut(s) 370, 649, 742, 857, 923, 1192, 1337
MlyI GAGTC 3 cut(s) 215, 388, 719
MmeI TCCRAC 4 cut(s) 219, 318, 635, 885
MseI TTAA 1 cut(s) 1340
MspI CCGG 9 cut(s) 73, 109, 129, 276, 327, 359, 474, 484, 1066
MspR9I CCNGG 3 cut(s) 110, 164, 328
MvaI CCWGG 1 cut(s) 164
MvnI CGCG 3 cut(s) 51, 266, 401
MwoI GCNNNNNNNGC 1 cut(s) 1390
NciI CCSGG 2 cut(s) 110, 328
NdeII GATC 7 cut(s) 69, 250, 292, 727, 731, 835, 1246
NlaIII CATG 4 cut(s) 179, 857, 1054, 1400
NlaIV GGNNCC 1 cut(s) 23
NmuCI GTSAC 4 cut(s) 394, 946, 1006, 1169
PagI TCATGA 1 cut(s) 1396
PciSI GCTCTTC 1 cut(s) 1064
PfeI GAWTC 2 cut(s) 661, 1208
Pfl23II CGTACG 1 cut(s) 384
PflMI CCANNNNNTGG 1 cut(s) 169
PfoI TCCNGGA 1 cut(s) 162
PkrI GCNGC 3 cut(s) 7, 265, 976
Ple19I CGATCG 1 cut(s) 253
PleI GAGTC 3 cut(s) 215, 387, 718
PpsI GAGTC 3 cut(s) 215, 387, 718
Ppu21I YACGTR 1 cut(s) 388
PsiI TTATAA 1 cut(s) 408
Psp124BI GAGCTC 1 cut(s) 275
Psp6I CCWGG 1 cut(s) 162
PspEI GGTNACC 2 cut(s) 394, 1006
PspFI CCCAGC 1 cut(s) 447
PspGI CCWGG 1 cut(s) 162
PspLI CGTACG 1 cut(s) 384
PspN4I GGNNCC 1 cut(s) 23
PspPI GGNCC 2 cut(s) 172, 476
PstNI CAGNNNCTG 1 cut(s) 169
PsuI RGATCY 1 cut(s) 69
PvuI CGATCG 1 cut(s) 253
RsaI GTAC 3 cut(s) 218, 386, 430
RsaNI GTAC 3 cut(s) 217, 385, 429
Rsr2I CGGWCCG 1 cut(s) 476
RsrII CGGWCCG 1 cut(s) 476
SacI GAGCTC 1 cut(s) 275
SapI GCTCTTC 1 cut(s) 1064
SaqAI TTAA 1 cut(s) 1340
SatI GCNGC 3 cut(s) 6, 264, 975
Sau3AI GATC 7 cut(s) 69, 250, 292, 727, 731, 835, 1246
Sau96I GGNCC 2 cut(s) 172, 476
SchI GAGTC 3 cut(s) 215, 388, 719
ScrFI CCNGG 3 cut(s) 110, 164, 328
SduI GDGCHC 1 cut(s) 275
SfaNI GCATC 3 cut(s) 294, 603, 691
SinI GGWCC 1 cut(s) 476
SmlI CTYRAG 1 cut(s) 899
SmoI CTYRAG 1 cut(s) 899
Sse9I AATT 7 cut(s) 370, 649, 742, 857, 923, 1192, 1337
SstI GAGCTC 1 cut(s) 275
StyD4I CCNGG 3 cut(s) 108, 162, 326
TaaI ACNGT 5 cut(s) 319, 346, 433, 559, 1160
TaiI ACGT 2 cut(s) 390, 468
TaqI TCGA 7 cut(s) 269, 674, 685, 713, 730, 987, 1299
TaqII GACCGA 1 cut(s) 1025
TasI AATT 7 cut(s) 370, 649, 742, 857, 923, 1192, 1337
TauI GCSGC 2 cut(s) 8, 266
TfiI GAWTC 2 cut(s) 661, 1208
Tru1I TTAA 1 cut(s) 1340
Tru9I TTAA 1 cut(s) 1340
TseFI GTSAC 4 cut(s) 394, 946, 1006, 1169
TseI GCWGC 1 cut(s) 974
Tsp45I GTSAC 4 cut(s) 394, 946, 1006, 1169
TspDTI ATGAA 9 cut(s) 773, 870, 930, 936, 1039, 1197, 1217, 1272, 1385
TspGWI ACGGA 2 cut(s) 372, 1213
Van91I CCANNNNNTGG 1 cut(s) 169
VpaK11BI GGWCC 1 cut(s) 476
XapI RAATTY 2 cut(s) 370, 857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.