RLG00000005085

dnaJ homolog subfamily C member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0010033
Physical Location & Seq
Forward (+)
64876804 .. 64879360
2557 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005085

Sequence Viewer

Length: 1923 bp
ATGGAGCGGCGGTGCCACTACGAGGTGCTCGGCGTCGACCGCGGTTGCACCGCCGACAAGATCAAGTCGGCGTACCGGAAACTCGCCCTGCAGCGCCACCCCGACAAGCTCATCCCCACCGGCGTCTCCCAGGCCGACGCCAACGCCCAGTTCCAGGAGCTCGGCCACGCCTACGAGGTCCTCTCCGATCCCAAGGAGCGAGCCTGGTACGACTCCCACCGCTCCCAGATCCTCTTCGCCGATCCCTCCGCCGCCAACTCCGTCCCCGACTCCGTCATCCCCAACCTCTTCAGCTTCTTCTCCACCACCGTCTTCTCCGGCTACTCCGACTCCGGCAAGGGCTTCTACAAGGTCTACGCCGACGTCTTCAATAAAATCTACTCGAACGAGCTGAATTTCGCGAGGAAGTTAGGGTTAGGGATTGACGCCGTGAGGGAGTCTCCGGCGTTGGGGAATTTGAAGAGCGATTATGCTCAGGTGACGGCGTTTTATGGCTACTGGCTAGGTTTTTGTACGGTGATGGATTTCTGCTGGGTGGATCAGTATGACGTCATGGCGGGGCCGAATCGGAAGGTGAGGAGGATGATGGAGGAGGATAATAAGAAGCAGAGGAAGAAGGCTAAGAGAGAGTATAATGAGACTGTGCGGGGGTTGGCGGAGTTTGTGAAGAAGAGGGATAAGAGGGTGATGGATATGATGGTGAAGAGGGAGGAGGAGAGGGAGAGGAAGAAGAAGGAGGAGAGAGAGAAAAAGAAGAAGATGGAGAAGGAGAAACTGGAGAGGGCTATGGCGTATGAGGAGCCGGAGTGGGCGAAAGCGGTTGAGGAGGAAGAGGCAGGGGATGAGGAGGAGGAGGAGGAGGAGAGGAAGAGGAATGAGCTGTATTGTGTGGTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAGTGGAAGAATCATGAGCAGTCAAAGAAGCATAAGGATAAGATTGCGGAGTTTAGGGAGTCGATTGGGGATGAAGAACTTGATGAAGAGGAAGTGGATGATTTAGGTGAGCAAATGAGGGAGGGTTTGGAGATTGGGGACGAGGATGATGGGGCTGGAGTGAGTGCCGGTGAGGATGAGTTTTATGATTTTGGTGATGAAAGTCAGAGGGAAAAGCTTGATGATGACGACGAGGATGATAATGGTGGTGATGATGATGAGATGGAACTTCTTCAAGCAATGGCGGCCAGGCACAAGAGTAGGGAAAAGCTTGATGGTGATGGTGATGGTGATGGTGATGGTGAAATGGAACTTCTAAAAGCAATGGCAGCCAGGCAGAAGAGTAGGGAAAATGTTGGTGAAGCAGTTGGAGTTGATGACGGTGATAGTGGGAGTGAGGATGAAATGGATGTTCTTGAAGCATTGGTGGCAGGGCGAAAGAGTAGGAAAAATGCAGCTTCAAGGGTTGAGGTTGAGGATCCCTTGGTGACCGGTGTTCATGTGGATAATGATAGCAATGGTGTAGAGTCCATTCCTATGGAATATGAGAATCGGAAGACCACCAGAAGGAAAGGGAAGAGTAAGAAGAGTGGTGGAGAAACTAAAAGGGTCGACATGAATGAAATTAGTAATGGTCAAAGTGAGGCAGCTAGTGAAAATGATAATTCAGATATAAAGGAATCCACATCTGATTCTGTGGTGGAAACTGCGAGTACTAATGATAAACAGGATGATCAAATAGCCAGAAAGAAGAAATCTTCGAAACAAACTGTAGAGAAGAAGAAAGAGAATGTGAAGAAAGAGGCCAACGGCAAATCGAAGAGCTCCTTCAAAGGGAAGAAAGCTAAGGCAACATTAAAGAATTCTAGCAATGCATGTGAGGCATGTGGAGAGGAGTTTGGATCAAGGAATCAATTACATAAGCATTTAGGTGACACTGGACATGCTACACTGAAGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ zf-C2H2_jaz

Protein Analysis

641

Amino Acids

72.47

Weight (kDa)

5.14

Isoelectric Point (pI)

42.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 6 - 71 2.7e-21 DnaJ domain
ZUO1-like_ZHD PF21884 120 - 229 4.2e-21 Zuotin-like, zuotin homology domain
zf-C2H2_jaz PF12171 294 - 319 1.6e-10 Zinc-finger double-stranded RNA-binding
zf-met PF12874 294 - 318 1.8e-08 Zinc-finger of C2H2 type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 366, 552
AccB1I GGYRCC 1 cut(s) 12
AccBSI CCGCTC 2 cut(s) 7, 222
AccI GTMKAC 3 cut(s) 36, 354, 1572
AccII CGCG 2 cut(s) 42, 401
AclWI GGATC 7 cut(s) 182, 223, 236, 546, 1433, 1446, 1870
AcoI YGGCCR 2 cut(s) 163, 1206
AcsI RAATTY 3 cut(s) 394, 454, 1822
AcuI CTGAAG 1 cut(s) 274
AcyI GRCGYC 6 cut(s) 33, 123, 138, 363, 426, 549
AfaI GTAC 4 cut(s) 74, 209, 514, 1675
AfiI CCNNNNNNNGG 5 cut(s) 22, 154, 449, 1527, 1794
AgeI ACCGGT 1 cut(s) 1451
AgsI TTSAA 6 cut(s) 370, 460, 1196, 1379, 1422, 1792
AjnI CCWGG 5 cut(s) 129, 153, 203, 1208, 1292
AjuI GAANNNNNNNTTGG 2 cut(s) 134, 166
Alw21I GWGCWC 3 cut(s) 30, 162, 1787
Alw26I GTCTC 3 cut(s) 130, 444, 632
AlwI GGATC 7 cut(s) 182, 223, 236, 546, 1433, 1446, 1870
AoxI GGCC 5 cut(s) 132, 163, 560, 1206, 1764
ApeKI GCWGC 4 cut(s) 91, 1289, 1415, 1607
ApoI RAATTY 3 cut(s) 394, 454, 1822
AsiGI ACCGGT 1 cut(s) 1451
Asp700I GAANNNNTTC 1 cut(s) 1191
AspLEI GCGC 1 cut(s) 96
AspS9I GGNCC 2 cut(s) 178, 560
AsuII TTCGAA 1 cut(s) 1721
AvaII GGWCC 1 cut(s) 178
BamHI GGATCC 1 cut(s) 1438
BanI GGYRCC 1 cut(s) 12
BanII GRGCYC 2 cut(s) 162, 1787
BbsI GAAGAC 3 cut(s) 304, 358, 1523
Bbv12I GWGCWC 3 cut(s) 30, 162, 1787
BbvI GCAGC 4 cut(s) 103, 1301, 1427, 1619
BceAI ACGGC 3 cut(s) 413, 498, 1786
BciT130I CCWGG 5 cut(s) 131, 155, 205, 1210, 1294
BclI TGATCA 1 cut(s) 1693
BcoDI GTCTC 3 cut(s) 130, 444, 632
BfaI CTAG 3 cut(s) 503, 1611, 1827
BfmI CTRYAG 2 cut(s) 89, 1731
BfoI RGCGCY 1 cut(s) 97
BisI GCNGC 7 cut(s) 8, 92, 252, 1206, 1290, 1416, 1608
BlsI GCNGC 7 cut(s) 9, 93, 253, 1207, 1291, 1417, 1609
BmcAI AGTACT 1 cut(s) 1675
Bme1390I CCNGG 5 cut(s) 131, 155, 205, 1210, 1294
Bme18I GGWCC 1 cut(s) 178
BmgT120I GGNCC 2 cut(s) 178, 560
BmiI GGNNCC 4 cut(s) 14, 561, 801, 1440
BmrFI CCNGG 5 cut(s) 131, 155, 205, 1210, 1294
BmrI ACTGGG 1 cut(s) 142
BmuI ACTGGG 1 cut(s) 142
BpiI GAAGAC 3 cut(s) 304, 358, 1523
BplI GAGNNNNNCTC 4 cut(s) 167, 199, 424, 456
BpmI CTGGAG 2 cut(s) 797, 1098
Bpu10I CCTNAGC 2 cut(s) 474, 1806
Bpu14I TTCGAA 1 cut(s) 1721
BsaHI GRCGYC 6 cut(s) 33, 123, 138, 363, 426, 549
BsaJI CCNNGG 4 cut(s) 40, 129, 192, 1443
BsaWI WCCGGW 2 cut(s) 75, 1451
BsaXI ACNNNNNCTCC 5 cut(s) 26, 314, 344, 791, 821
Bsc4I CCNNNNNNNGG 5 cut(s) 22, 154, 449, 1527, 1794
Bse118I RCCGGY 3 cut(s) 119, 1088, 1451
Bse1I ACTGG 4 cut(s) 148, 503, 780, 1903
Bse3DI GCAATG 4 cut(s) 1206, 1290, 1483, 1837
BseBI CCWGG 5 cut(s) 131, 155, 205, 1210, 1294
BseDI CCNNGG 4 cut(s) 40, 129, 192, 1443
BseLI CCNNNNNNNGG 5 cut(s) 22, 154, 449, 1527, 1794
BseMI GCAATG 4 cut(s) 1206, 1290, 1483, 1837
BseMII CTCAG 1 cut(s) 488
BseNI ACTGG 4 cut(s) 148, 503, 780, 1903
BseXI GCAGC 4 cut(s) 103, 1301, 1427, 1619
BseYI CCCAGC 1 cut(s) 531
Bsh1236I CGCG 2 cut(s) 42, 401
Bsh1285I CGRYCG 1 cut(s) 40
BshFI GGCC 5 cut(s) 134, 165, 562, 1208, 1766
BshNI GGYRCC 1 cut(s) 12
BshTI ACCGGT 1 cut(s) 1451
BsiEI CGRYCG 1 cut(s) 40
BsiHKAI GWGCWC 3 cut(s) 30, 162, 1787
BsiSI CCGG 8 cut(s) 76, 120, 318, 333, 443, 803, 1089, 1452
BslFI GGGAC 2 cut(s) 248, 1073
BslI CCNNNNNNNGG 5 cut(s) 22, 154, 449, 1527, 1794
BsmAI GTCTC 3 cut(s) 130, 444, 632
BsmBI CGTCTC 1 cut(s) 130
BsmFI GGGAC 2 cut(s) 248, 1073
BsnI GGCC 5 cut(s) 134, 165, 562, 1208, 1766
Bsp119I TTCGAA 1 cut(s) 1721
Bsp1286I GDGCHC 3 cut(s) 30, 162, 1787
Bsp143I GATC 8 cut(s) 60, 187, 228, 241, 538, 1438, 1693, 1862
Bsp68I TCGCGA 1 cut(s) 401
BspANI GGCC 5 cut(s) 134, 165, 562, 1208, 1766
BspCNI CTCAG 1 cut(s) 487
BspFNI CGCG 2 cut(s) 42, 401
BspHI TCATGA 1 cut(s) 934
BspLI GGNNCC 4 cut(s) 14, 561, 801, 1440
BspMAI CTGCAG 1 cut(s) 93
BspPI GGATC 7 cut(s) 182, 223, 236, 546, 1433, 1446, 1870
BspQI GCTCTTC 2 cut(s) 455, 1775
BspT104I TTCGAA 1 cut(s) 1721
BspT107I GGYRCC 1 cut(s) 12
BsrBI CCGCTC 2 cut(s) 7, 222
BsrDI GCAATG 4 cut(s) 1206, 1290, 1483, 1837
BsrFI RCCGGY 3 cut(s) 119, 1088, 1451
BsrI ACTGG 4 cut(s) 148, 503, 780, 1903
BssAI RCCGGY 3 cut(s) 119, 1088, 1451
BssECI CCNNGG 4 cut(s) 40, 129, 192, 1443
BssMI GATC 8 cut(s) 60, 187, 228, 241, 538, 1438, 1693, 1862
BssNI GRCGYC 6 cut(s) 33, 123, 138, 363, 426, 549
BssT1I CCWWGG 2 cut(s) 192, 1443
Bst2UI CCWGG 5 cut(s) 131, 155, 205, 1210, 1294
Bst4CI ACNGT 5 cut(s) 310, 517, 643, 1343, 1732
BstACI GRCGYC 6 cut(s) 33, 123, 138, 363, 426, 549
BstBI TTCGAA 1 cut(s) 1721
BstC8I GCNNGC 1 cut(s) 201
BstDEI CTNAG 3 cut(s) 474, 621, 1806
BstDSI CCRYGG 1 cut(s) 40
BstEII GGTNACC 1 cut(s) 1447
BstFNI CGCG 2 cut(s) 42, 401
BstH2I RGCGCY 1 cut(s) 97
BstHHI GCGC 1 cut(s) 96
BstKTI GATC 8 cut(s) 63, 190, 231, 244, 541, 1441, 1696, 1865
BstMAI GTCTC 3 cut(s) 130, 444, 632
BstMBI GATC 8 cut(s) 60, 187, 228, 241, 538, 1438, 1693, 1862
BstMCI CGRYCG 1 cut(s) 40
BstMWI GCNNNNNNNGC 5 cut(s) 39, 1205, 1289, 1388, 1841
BstNI CCWGG 5 cut(s) 131, 155, 205, 1210, 1294
BstNSI RCATGY 3 cut(s) 1839, 1848, 1907
BstPI GGTNACC 1 cut(s) 1447
BstSCI CCNGG 5 cut(s) 129, 153, 203, 1208, 1292
BstSFI CTRYAG 2 cut(s) 89, 1731
BstUI CGCG 2 cut(s) 42, 401
BstV1I GCAGC 4 cut(s) 103, 1301, 1427, 1619
BstV2I GAAGAC 3 cut(s) 304, 358, 1523
BstX2I RGATCY 2 cut(s) 228, 1438
BstXI CCANNNNNNTGG 1 cut(s) 1498
BstYI RGATCY 2 cut(s) 228, 1438
BsuRI GGCC 5 cut(s) 134, 165, 562, 1208, 1766
BtgI CCRYGG 1 cut(s) 40
BtsI GCAGTG 1 cut(s) 929
BtsIMutI CAGTG 3 cut(s) 929, 1896, 1910
BtuMI TCGCGA 1 cut(s) 401
Cac8I GCNNGC 1 cut(s) 201
CciI TCATGA 1 cut(s) 934
CfoI GCGC 1 cut(s) 96
Cfr10I RCCGGY 3 cut(s) 119, 1088, 1451
Cfr13I GGNCC 2 cut(s) 178, 560
Cfr42I CCGCGG 1 cut(s) 43
CseI GACGC 4 cut(s) 22, 112, 146, 434
Csp6I GTAC 4 cut(s) 73, 208, 513, 1674
CspAI ACCGGT 1 cut(s) 1451
CviAII CATG 7 cut(s) 553, 935, 1460, 1576, 1836, 1845, 1904
CviQI GTAC 4 cut(s) 73, 208, 513, 1674
DdeI CTNAG 3 cut(s) 474, 621, 1806
DpnI GATC 8 cut(s) 62, 189, 230, 243, 540, 1440, 1695, 1864
DpnII GATC 8 cut(s) 60, 187, 228, 241, 538, 1438, 1693, 1862
EaeI YGGCCR 2 cut(s) 163, 1206
EciI GGCGGA 2 cut(s) 238, 671
Ecl136II GAGCTC 2 cut(s) 160, 1785
Eco130I CCWWGG 2 cut(s) 192, 1443
Eco24I GRGCYC 2 cut(s) 162, 1787
Eco47I GGWCC 1 cut(s) 178
Eco53kI GAGCTC 2 cut(s) 160, 1785
Eco57I CTGAAG 1 cut(s) 274
Eco91I GGTNACC 1 cut(s) 1447
EcoICRI GAGCTC 2 cut(s) 160, 1785
EcoO109I RGGNCCY 1 cut(s) 178
EcoO65I GGTNACC 1 cut(s) 1447
EcoRI GAATTC 1 cut(s) 1822
EcoRII CCWGG 5 cut(s) 129, 153, 203, 1208, 1292
EcoT14I CCWWGG 2 cut(s) 192, 1443
EcoT22I ATGCAT 1 cut(s) 1837
EcoT38I GRGCYC 2 cut(s) 162, 1787
ErhI CCWWGG 2 cut(s) 192, 1443
Esp3I CGTCTC 1 cut(s) 130
FaeI CATG 7 cut(s) 556, 938, 1463, 1579, 1839, 1848, 1907
FalI AAGNNNNNCTT 2 cut(s) 1772, 1804
FaqI GGGAC 2 cut(s) 248, 1073
FatI CATG 7 cut(s) 552, 934, 1459, 1575, 1835, 1844, 1903
FauI CCCGC 2 cut(s) 550, 639
FbaI TGATCA 1 cut(s) 1693
FblI GTMKAC 3 cut(s) 36, 354, 1572
Fnu4HI GCNGC 7 cut(s) 8, 92, 252, 1206, 1290, 1416, 1608
FriOI GRGCYC 2 cut(s) 162, 1787
Fsp4HI GCNGC 7 cut(s) 8, 92, 252, 1206, 1290, 1416, 1608
FspBI CTAG 3 cut(s) 503, 1611, 1827
GlaI GCGC 1 cut(s) 95
GluI GCNGC 7 cut(s) 8, 92, 252, 1206, 1290, 1416, 1608
GsaI CCCAGC 1 cut(s) 535
GsuI CTGGAG 2 cut(s) 797, 1098
HaeII RGCGCY 1 cut(s) 97
HaeIII GGCC 5 cut(s) 134, 165, 562, 1208, 1766
HapII CCGG 8 cut(s) 76, 120, 318, 333, 443, 803, 1089, 1452
HgaI GACGC 4 cut(s) 22, 112, 146, 434
HhaI GCGC 1 cut(s) 96
Hin1I GRCGYC 6 cut(s) 33, 123, 138, 363, 426, 549
Hin1II CATG 7 cut(s) 556, 938, 1463, 1579, 1839, 1848, 1907
Hin6I GCGC 1 cut(s) 94
HinP1I GCGC 1 cut(s) 94
HincII GTYRAC 2 cut(s) 37, 1573
HindII GTYRAC 2 cut(s) 37, 1573
HindIII AAGCTT 2 cut(s) 1136, 1229
HpaII CCGG 8 cut(s) 76, 120, 318, 333, 443, 803, 1089, 1452
Hpy166II GTNNAC 3 cut(s) 37, 355, 1573
Hpy188I TCNGA 7 cut(s) 187, 328, 570, 1128, 1515, 1630, 1651
Hpy188III TCNNGA 3 cut(s) 400, 935, 1376
Hpy8I GTNNAC 3 cut(s) 37, 355, 1573
Hpy99I CGWCG 4 cut(s) 38, 140, 365, 1154
HpyAV CCTTC 6 cut(s) 565, 610, 727, 760, 1521, 1798
HpyCH4III ACNGT 5 cut(s) 310, 517, 643, 1343, 1732
HpyCH4IV ACGT 2 cut(s) 363, 549
HpyCH4V TGCA 4 cut(s) 48, 91, 1415, 1835
HpyF10VI GCNNNNNNNGC 5 cut(s) 39, 1205, 1289, 1388, 1841
HpyF3I CTNAG 3 cut(s) 474, 621, 1806
HpySE526I ACGT 2 cut(s) 363, 549
Hsp92I GRCGYC 6 cut(s) 33, 123, 138, 363, 426, 549
Hsp92II CATG 7 cut(s) 556, 938, 1463, 1579, 1839, 1848, 1907
HspAI GCGC 1 cut(s) 94
Ksp22I TGATCA 1 cut(s) 1693
KspI CCGCGG 1 cut(s) 43
Kzo9I GATC 8 cut(s) 60, 187, 228, 241, 538, 1438, 1693, 1862
LguI GCTCTTC 2 cut(s) 455, 1775
LmnI GCTCC 6 cut(s) 4, 157, 196, 227, 799, 1790
Lsp1109I GCAGC 4 cut(s) 103, 1301, 1427, 1619
MaeI CTAG 3 cut(s) 503, 1611, 1827
MaeII ACGT 2 cut(s) 363, 549
MaeIII GTNAC 3 cut(s) 478, 1447, 1892
MalI GATC 8 cut(s) 62, 189, 230, 243, 540, 1440, 1695, 1864
MbiI CCGCTC 2 cut(s) 7, 222
MboI GATC 8 cut(s) 60, 187, 228, 241, 538, 1438, 1693, 1862
MflI RGATCY 2 cut(s) 228, 1438
MhlI GDGCHC 3 cut(s) 30, 162, 1787
MluCI AATT 6 cut(s) 394, 454, 1584, 1624, 1822, 1874
MlyI GAGTC 6 cut(s) 206, 263, 323, 446, 989, 1496
MmeI TCCRAC 2 cut(s) 351, 1309
Mph1103I ATGCAT 1 cut(s) 1837
MroXI GAANNNNTTC 1 cut(s) 1191
MseI TTAA 2 cut(s) 909, 1817
MslI CAYNNNNRTG 2 cut(s) 1496, 1890
MspA1I CMGCKG 1 cut(s) 42
MspI CCGG 8 cut(s) 76, 120, 318, 333, 443, 803, 1089, 1452
MspR9I CCNGG 5 cut(s) 131, 155, 205, 1210, 1294
MvaI CCWGG 5 cut(s) 131, 155, 205, 1210, 1294
MvnI CGCG 2 cut(s) 42, 401
MwoI GCNNNNNNNGC 5 cut(s) 39, 1205, 1289, 1388, 1841
NdeII GATC 8 cut(s) 60, 187, 228, 241, 538, 1438, 1693, 1862
NlaIII CATG 7 cut(s) 556, 938, 1463, 1579, 1839, 1848, 1907
NlaIV GGNNCC 4 cut(s) 14, 561, 801, 1440
NmeAIII GCCGAG 2 cut(s) 9, 141
NmuCI GTSAC 3 cut(s) 478, 1447, 1892
NruI TCGCGA 1 cut(s) 401
NsiI ATGCAT 1 cut(s) 1837
NspI RCATGY 3 cut(s) 1839, 1848, 1907
NspV TTCGAA 1 cut(s) 1721
PagI TCATGA 1 cut(s) 934
PciSI GCTCTTC 2 cut(s) 455, 1775
PdmI GAANNNNTTC 1 cut(s) 1191
PfeI GAWTC 6 cut(s) 565, 931, 1510, 1640, 1652, 1870
PflFI GACNNNGTC 1 cut(s) 272
PfoI TCCNGGA 1 cut(s) 153
PinAI ACCGGT 1 cut(s) 1451
PkrI GCNGC 7 cut(s) 9, 93, 253, 1207, 1291, 1417, 1609
PleI GAGTC 6 cut(s) 206, 263, 323, 445, 988, 1495
PpsI GAGTC 6 cut(s) 206, 263, 323, 445, 988, 1495
PpuMI RGGWCCY 1 cut(s) 178
Psp124BI GAGCTC 2 cut(s) 162, 1787
Psp5II RGGWCCY 1 cut(s) 178
Psp6I CCWGG 5 cut(s) 129, 153, 203, 1208, 1292
PspEI GGTNACC 1 cut(s) 1447
PspFI CCCAGC 1 cut(s) 531
PspGI CCWGG 5 cut(s) 129, 153, 203, 1208, 1292
PspN4I GGNNCC 4 cut(s) 14, 561, 801, 1440
PspPI GGNCC 2 cut(s) 178, 560
PspPPI RGGWCCY 1 cut(s) 178
PstI CTGCAG 1 cut(s) 93
PsuI RGATCY 2 cut(s) 228, 1438
PsyI GACNNNGTC 1 cut(s) 272
RruI TCGCGA 1 cut(s) 401
RsaI GTAC 4 cut(s) 74, 209, 514, 1675
RsaNI GTAC 4 cut(s) 73, 208, 513, 1674
RseI CAYNNNNRTG 2 cut(s) 1496, 1890
SacI GAGCTC 2 cut(s) 162, 1787
SacII CCGCGG 1 cut(s) 43
SalI GTCGAC 2 cut(s) 35, 1571
SapI GCTCTTC 2 cut(s) 455, 1775
SaqAI TTAA 2 cut(s) 909, 1817
SatI GCNGC 7 cut(s) 8, 92, 252, 1206, 1290, 1416, 1608
Sau3AI GATC 8 cut(s) 60, 187, 228, 241, 538, 1438, 1693, 1862
Sau96I GGNCC 2 cut(s) 178, 560
ScaI AGTACT 1 cut(s) 1675
SchI GAGTC 6 cut(s) 206, 263, 323, 446, 989, 1496
ScrFI CCNGG 5 cut(s) 131, 155, 205, 1210, 1294
SduI GDGCHC 3 cut(s) 30, 162, 1787
SfcI CTRYAG 2 cut(s) 89, 1731
Sfr303I CCGCGG 1 cut(s) 43
SfuI TTCGAA 1 cut(s) 1721
SgrAI CRCCGGYG 1 cut(s) 119
SgrBI CCGCGG 1 cut(s) 43
SinI GGWCC 1 cut(s) 178
SmiMI CAYNNNNRTG 2 cut(s) 1496, 1890
Sse9I AATT 6 cut(s) 394, 454, 1584, 1624, 1822, 1874
SspMI CTAG 3 cut(s) 503, 1611, 1827
SstI GAGCTC 2 cut(s) 162, 1787
StyD4I CCNGG 5 cut(s) 129, 153, 203, 1208, 1292
StyI CCWWGG 2 cut(s) 192, 1443
TaaI ACNGT 5 cut(s) 310, 517, 643, 1343, 1732
TaiI ACGT 2 cut(s) 366, 552
TaqI TCGA 6 cut(s) 36, 383, 983, 1572, 1721, 1778
TasI AATT 6 cut(s) 394, 454, 1584, 1624, 1822, 1874
TatI WGTACW 1 cut(s) 1673
TauI GCSGC 3 cut(s) 10, 254, 1208
TfiI GAWTC 6 cut(s) 565, 931, 1510, 1640, 1652, 1870
Tru1I TTAA 2 cut(s) 909, 1817
Tru9I TTAA 2 cut(s) 909, 1817
TscAI CASTG 3 cut(s) 929, 1903, 1917
TseFI GTSAC 3 cut(s) 478, 1447, 1892
TseI GCWGC 4 cut(s) 91, 1289, 1415, 1607
Tsp45I GTSAC 3 cut(s) 478, 1447, 1892
TspDTI ATGAA 7 cut(s) 1008, 1020, 1134, 1377, 1448, 1592, 1596
TspGWI ACGGA 2 cut(s) 250, 262
TspRI CASTG 3 cut(s) 929, 1903, 1917
Tth111I GACNNNGTC 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 178
XapI RAATTY 3 cut(s) 394, 454, 1822
XceI RCATGY 3 cut(s) 1839, 1848, 1907
XmiI GTMKAC 3 cut(s) 36, 354, 1572
XmnI GAANNNNTTC 1 cut(s) 1191
XspI CTAG 3 cut(s) 503, 1611, 1827
ZraI GACGTC 2 cut(s) 364, 550
ZrmI AGTACT 1 cut(s) 1675
Zsp2I ATGCAT 1 cut(s) 1837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.