Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0012277

Physical Location & Seq

Genomic Coordinates Forward (+)

8512701 .. 8515409

Gene Structure 2709 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g15030.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2709 bp

ATGCTCCCCCTTTTCTCTACACAAATCCGAATGAAATCTCTCCTCAATCCAAAAACCCATTTCAAAATCTCACTCTCCTCTCTCAATTTCATATCCTCCCTCGCCTATGTCGAAAACCCACCTTATCCCCAAACCGAAAACCTCAAAATTCCCAGTGTTTTTGACCCCTTCAAATTCTTCAGTGACTACACAACTTCAATCAACTGCACTATTCGAAACACCAGAATCTTACATGCCCACCTTCTCAGACTCCATTTTCTACTCTCCAATGTCTCCATTTCCAATTCATTACTTGACTGTTACTGTCGATCTGCTGCCATGGAAGATGCACTCCACCTGTTCGATGTAATTCCTCAGAGAAATGTTATCTCTTGGAATTTCATGGTTTCGGGTTATAACCGGAACTCGGTGTATGAGAGATCATGGGGAGTGTTCTGCAGGATGCATTGTTCGGGGTTTGAGCCGGATGAGTTTACTTATGGGAGTGTTCTTTCGGCTTGCGCTGCGTTGCGAGCTCCTGGTTTGGGTAAGCAGGTTTACTCGCTCGCGACGAAAAATGGGTTCTTTTCTAATGACTATGTTCGGTCTGGAATGATAGACTTGTTTGCGAAAAATGGTAGCTTTGAGGATGCTTTGAGGGTGTTTTGTGATGTTTCGTGTCGGAATGTGGTGATTTGGAATGCTCTTATCTCCGGGGCTGTGAGAAATGGAGAGAACAGAGTTGCGTTGGAAATTTTTCGGCAAATGTGTTGTGGGTTTGTGTTGCCGAGTAACTTTACGTTTTCTAGTGTCTTGACTGCCTGTGCTGCACTTGAAGAGATTGGGATTGGGAAAAGTGTTCACGGGTGGGTGATTAAGTGTGGTGCAGAAGATGTGTTTGTTGGGACTGCTATTGTGGATTTATATGCCAAATGTGGAAAGATGAATGAAGCTGTCAAGGAATTTTTCGGTATGCCAACATGTAATGTGGTCTCTTGGACTGCCATCATTTCTGGTTTTGTAAGCAAGGAAGATTCTATTTCTGCTGTCAAATTTTTCAGAGAAATGAGAAGAATGGGAGAGGAAATAAATAAGTTTACTGTTACTAGCATACTCACTGCATGTGCTAAACCATCCATGAGTGAAGAGGCAAACCAAATCCATTCACTGATATTGAAATCCGGACTGTATTTAGCTCCAGTAGTTGGGTCTGCTTTAATTAATGCGTATTCAAAAATAGGAGCAGTTGATTTATCTGAGATGGTGTTCAGGGAGACGGAAACTGTAAAAGATCCTGGTACATGGGCTGCAATGATATCTTCTTATGCGCAGAATCAAAATCCTGGAAGGGCAACTCGAGTTTTTCAGAGAATGTTACAGGAAGGTGTGCTACCAGATAAGTTTTCTACTTCTAGTGTCTTGAGTATTATAGACTTTTTAGTTGCAGGGAGACAGATCCATAGCTACATTCTCAAAGTTGGGTTGGTCACAGACAGTTCTGTTGGTAGTTCTCTTTCCACAATGTATTCGAAATGTGATAGTCTAGAGGAATCTTACAAGGCATTTCAGCAAATTCGTGAAAAAGACAGTGTTTCATGGGCCTCAATGATTGCTGGTTTTTCAGAACATGGCTTTGCAGATCAAGCCCTTCAGTTATATCGAGAGATGCCATATAAAGAAATTAAACCCGATCAGATGATTTTAGCTGCAATTTTAAATGCATGCTCTGCTTCTCGTTCCCTACTGATTGGTAAGGAAATTCATGGTCATGCTCTCCGTGCTGGAGTTGGAAGAGATGTAGTCGTTGGTGGTGCAATTGTGAACATGTACTCAAAATGCACTGCTCTAGAACTGGCTAGGAGGGTGTTCGATATGCTTCCTCAAAAAGATGAAGTTGCATGCTCTTCACTGGTTTCAGGTTATGCCCAAAATGGGTGCATTGAAGAGGCACTTTTGCTATTCAATTATATGCTGACGGCTGATTTGACCATTGATTCCTTCACAATTTCATCCATTCTTGGGGTCATTGCAGTTGTGAATAATCCAAGTTGTGGAACTCAAATGCATGCCCACATCACAAAAATTGGTTTGAATTCAGATGTTTCTGTTGACAGCTCGCTAGTGAGAATGTACTCAAAATGTGGAAGCATTGAAGATTGCCGGAAATCTTTTGATCAAATTGAGAACCCTGACTTAATTTGCTGGACAGCTATGATTGCAAGCTATGCTCAGCATGGGAAAGGTGCAGATGCTTTAAGAGGCTACGAGCTTTTGAGGGAAAAAGGAATCAAACCTGATTCCGTGACTTTTGTTGCAGTTTTATCTGCCTGTAGCCATAATGGATTGGTTGAAGAAGCCTATTTCTACTTCAATTCAATGGCTAGTGATTACGGAATTAAGCCTGGTTATCACCACTATGCCTGTATGGTTGATGTTCTTGGCCGTTCAGGGAGACTGAAAGAGGCTGAGAGGTTCATTATCAATATGCCTATTGAACCTAATGGTATAATATGGGGAACACTGCTTGCTGCTTGCGTGATACATAGAGATGTAGAGCTTGGAAAGCTAACAGCTAAAAGGATTATGGACTTGGAGCCATGTGATGCCAGCACATATGTTTCCATTTCAAACATGTGTGCAGATTTGGGCCTGTGGGAAGAAGTCGCGCAAGTAAGAAACCAGATGAGAAGAAATTTTATGAAGAAAGAACCTGGTTGGAGCTTAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

903

Amino Acids

99.83

Weight (kDa)

6.57

Isoelectric Point (pI)

40.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	120 - 168	3.9e-09	PPR repeat family
PPR_2	PF13041	221 - 269	7.5e-10	PPR repeat family
PPR_2	PF13041	322 - 370	7.6e-10	PPR repeat family
PPR_2	PF13041	623 - 666	6.1e-06	PPR repeat family
PPR_2	PF13041	723 - 771	8.2e-09	PPR repeat family
E_motif	PF20431	841 - 900	6.4e-13	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012277)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74600
fragaria_vesca	FvH4_5g15030
malus_domestica	MD06G1192600.v1.1 MD14G1199400.v1.1
prunus_persica	Prupe.5G192400_v2.0.a1 Prupe.5G192400_v2.0.a1 Prupe.5G192400_v2.0.a1
pyrus_communis	pycom06g17070 pycom14g16530
rosa_chinensis	RchiOBHm_Chr7g0181221
rosa_laevigata	RLG00000005205
rosa_multiflora	Rmu_sc0001147.1_g000014
rosa_roxburghii	Rroxscaffold_3G00272190
rosa_rugosa	Rorug06G0439600
rosa_samantha	Rh7AG041400 Rh7BG040700 Rh7CG042900 Rh7DG041200
rosa_wichuraiana	Rw7G003410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	396
Acc16I	TGCGCA	1 cut(s)	1308
Acc36I	ACCTGC	1 cut(s)	523
AccB7I	CCANNNNNTGG	2 cut(s)	1184, 2030
AccII	CGCG	2 cut(s)	548, 2645
AccIII	TCCGGA	1 cut(s)	1160
AclWI	GGATC	2 cut(s)	1265, 1429
AcoI	YGGCCR	1 cut(s)	2419
AcuI	CTGAAG	2 cut(s)	163, 1613
AfaI	GTAC	3 cut(s)	1279, 1808, 2111
AfiI	CCNNNNNNNGG	6 cut(s)	406, 524, 1184, 1911, 1998, 2030
AflIII	ACRYGT	3 cut(s)	959, 1803, 2610
AjnI	CCWGG	5 cut(s)	517, 1273, 1321, 2380, 2689
AloI	GAACNNNNNNTCC	2 cut(s)	433, 465
Alw21I	GWGCWC	1 cut(s)	517
Alw26I	GTCTC	5 cut(s)	277, 976, 1247, 1423, 2425
AlwI	GGATC	2 cut(s)	1265, 1429
Ama87I	CYCGRG	1 cut(s)	1335
Aor13HI	TCCGGA	1 cut(s)	1160
AoxI	GGCC	3 cut(s)	1578, 2419, 2626
ApeKI	GCWGC	6 cut(s)	314, 503, 806, 1286, 1685, 2507
ArsI	GACNNNNNNTTYG	2 cut(s)	1945, 1977
AseI	ATTAAT	1 cut(s)	1200
Asp700I	GAANNNNTTC	1 cut(s)	735
AspLEI	GCGC	3 cut(s)	503, 1309, 2647
AspS9I	GGNCC	2 cut(s)	1578, 2626
AsuC2I	CCSGG	1 cut(s)	694
AsuHPI	GGTGA	3 cut(s)	682, 862, 2381
AsuII	TTCGAA	2 cut(s)	214, 1508
AvaI	CYCGRG	1 cut(s)	1335
BanII	GRGCYC	1 cut(s)	517
BarI	GAAGNNNNNNTAC	2 cut(s)	1353, 1385
Bbv12I	GWGCWC	1 cut(s)	517
BbvI	GCAGC	6 cut(s)	301, 490, 793, 1273, 1672, 2494
BccI	CCATC	3 cut(s)	992, 1120, 1234
BceAI	ACGGC	2 cut(s)	1971, 2406
BciT130I	CCWGG	5 cut(s)	519, 1275, 1323, 2382, 2691
BclI	TGATCA	1 cut(s)	2152
BcnI	CCSGG	1 cut(s)	694
BcoDI	GTCTC	5 cut(s)	277, 976, 1247, 1423, 2425
BfaI	CTAG	8 cut(s)	786, 1086, 1392, 1523, 1826, 1836, 2099, 2361
BfmI	CTRYAG	2 cut(s)	436, 2308
BfuAI	ACCTGC	1 cut(s)	523
BisI	GCNGC	6 cut(s)	315, 504, 807, 1287, 1686, 2508
BlpI	GCTNAGC	1 cut(s)	2208
BlsI	GCNGC	6 cut(s)	316, 505, 808, 1288, 1687, 2509
Bme1390I	CCNGG	6 cut(s)	519, 694, 1275, 1323, 2382, 2691
BmeT110I	CYCGRG	1 cut(s)	1335
BmgT120I	GGNCC	2 cut(s)	1578, 2626
BmiI	GGNNCC	1 cut(s)	2574
BmrFI	CCNGG	6 cut(s)	519, 694, 1275, 1323, 2382, 2691
BmrI	ACTGGG	1 cut(s)	147
BmsI	GCATC	6 cut(s)	316, 432, 619, 1635, 2218, 2572
BmuI	ACTGGG	1 cut(s)	147
BpmI	CTGGAG	2 cut(s)	1161, 1782
Bpu1102I	GCTNAGC	1 cut(s)	2208
Bpu14I	TTCGAA	2 cut(s)	214, 1508
BpuEI	CTTGAG	1 cut(s)	1420
BpuMI	CCSGG	1 cut(s)	694
BsaI	GGTCTC	1 cut(s)	976
BsaJI	CCNNGG	2 cut(s)	318, 693
BsaWI	WCCGGW	2 cut(s)	399, 1160
Bsc4I	CCNNNNNNNGG	6 cut(s)	406, 524, 1184, 1911, 1998, 2030
Bse1I	ACTGG	4 cut(s)	153, 1178, 1836, 1893
Bse3DI	GCAATG	2 cut(s)	1296, 2004
BseAI	TCCGGA	1 cut(s)	1160
BseBI	CCWGG	5 cut(s)	519, 1275, 1323, 2382, 2691
BseDI	CCNNGG	2 cut(s)	318, 693
BseGI	GGATG	5 cut(s)	447, 472, 634, 1112, 1988
BseLI	CCNNNNNNNGG	6 cut(s)	406, 524, 1184, 1911, 1998, 2030
BseMI	GCAATG	2 cut(s)	1296, 2004
BseMII	CTCAG	5 cut(s)	259, 368, 1227, 2222, 2436
BseNI	ACTGG	4 cut(s)	153, 1178, 1836, 1893
BseRI	GAGGAG	2 cut(s)	32, 67
BseXI	GCAGC	6 cut(s)	301, 490, 793, 1273, 1672, 2494
BsgI	GTGCAG	5 cut(s)	190, 792, 885, 2244, 2637
Bsh1236I	CGCG	2 cut(s)	548, 2645
BshFI	GGCC	3 cut(s)	1580, 2421, 2628
BsiHKAI	GWGCWC	1 cut(s)	517
BsiHKCI	CYCGRG	1 cut(s)	1335
BsiSI	CCGG	5 cut(s)	400, 464, 693, 1161, 2140
BslFI	GGGAC	1 cut(s)	898
BslI	CCNNNNNNNGG	6 cut(s)	406, 524, 1184, 1911, 1998, 2030
BsmAI	GTCTC	5 cut(s)	277, 976, 1247, 1423, 2425
BsmBI	CGTCTC	1 cut(s)	1247
BsmFI	GGGAC	1 cut(s)	898
BsmI	GAATGC	1 cut(s)	685
BsnI	GGCC	3 cut(s)	1580, 2421, 2628
Bso31I	GGTCTC	1 cut(s)	976
BsoBI	CYCGRG	1 cut(s)	1335
Bsp119I	TTCGAA	2 cut(s)	214, 1508
Bsp1286I	GDGCHC	1 cut(s)	517
Bsp13I	TCCGGA	1 cut(s)	1160
Bsp143I	GATC	7 cut(s)	308, 419, 1270, 1434, 1618, 1669, 2152
Bsp1720I	GCTNAGC	1 cut(s)	2208
Bsp19I	CCATGG	1 cut(s)	318
Bsp68I	TCGCGA	1 cut(s)	548
BspANI	GGCC	3 cut(s)	1580, 2421, 2628
BspCNI	CTCAG	5 cut(s)	258, 367, 1228, 2221, 2437
BspEI	TCCGGA	1 cut(s)	1160
BspFNI	CGCG	2 cut(s)	548, 2645
BspLI	GGNNCC	1 cut(s)	2574
BspMAI	CTGCAG	1 cut(s)	440
BspMI	ACCTGC	1 cut(s)	523
BspPI	GGATC	2 cut(s)	1265, 1429
BspQI	GCTCTTC	1 cut(s)	1888
BspT104I	TTCGAA	2 cut(s)	214, 1508
BspTNI	GGTCTC	1 cut(s)	976
BsrDI	GCAATG	2 cut(s)	1296, 2004
BsrI	ACTGG	4 cut(s)	153, 1178, 1836, 1893
BssECI	CCNNGG	2 cut(s)	318, 693
BssMI	GATC	7 cut(s)	308, 419, 1270, 1434, 1618, 1669, 2152
BssT1I	CCWWGG	1 cut(s)	318
Bst2UI	CCWGG	5 cut(s)	519, 1275, 1323, 2382, 2691
Bst4CI	ACNGT	7 cut(s)	299, 305, 1081, 1167, 1264, 1475, 1568
Bst6I	CTCTTC	5 cut(s)	810, 1119, 1765, 1888, 1917
BstAPI	GCANNNNNTGC	2 cut(s)	1706, 2204
BstBI	TTCGAA	2 cut(s)	214, 1508
BstDEI	CTNAG	5 cut(s)	245, 354, 1236, 2208, 2445
BstDSI	CCRYGG	1 cut(s)	318
BstF5I	GGATG	5 cut(s)	447, 472, 634, 1112, 1988
BstFNI	CGCG	2 cut(s)	548, 2645
BstHHI	GCGC	3 cut(s)	503, 1309, 2647
BstKTI	GATC	7 cut(s)	311, 422, 1273, 1437, 1621, 1672, 2155
BstMAI	GTCTC	5 cut(s)	277, 976, 1247, 1423, 2425
BstMBI	GATC	7 cut(s)	308, 419, 1270, 1434, 1618, 1669, 2152
BstMWI	GCNNNNNNNGC	9 cut(s)	503, 512, 806, 1622, 1706, 1757, 2195, 2204, 2542
BstNI	CCWGG	5 cut(s)	519, 1275, 1323, 2382, 2691
BstNSI	RCATGY	8 cut(s)	236, 963, 1104, 1704, 1807, 1881, 2048, 2614
BstSCI	CCNGG	6 cut(s)	517, 692, 1273, 1321, 2380, 2689
BstSFI	CTRYAG	2 cut(s)	436, 2308
BstUI	CGCG	2 cut(s)	548, 2645
BstV1I	GCAGC	6 cut(s)	301, 490, 793, 1273, 1672, 2494
BstX2I	RGATCY	2 cut(s)	1270, 1434
BstYI	RGATCY	2 cut(s)	1270, 1434
BsuRI	GGCC	3 cut(s)	1580, 2421, 2628
BtgI	CCRYGG	1 cut(s)	318
BtsCI	GGATG	5 cut(s)	447, 472, 634, 1112, 1988
BtsI	GCAGTG	3 cut(s)	1095, 1818, 2498
BtsIMutI	CAGTG	8 cut(s)	160, 187, 1095, 1145, 1573, 1818, 1886, 2498
BtuMI	TCGCGA	1 cut(s)	548
BveI	ACCTGC	1 cut(s)	523
CfoI	GCGC	3 cut(s)	503, 1309, 2647
Cfr13I	GGNCC	2 cut(s)	1578, 2626
CsiI	ACCWGGT	1 cut(s)	2689
Csp6I	GTAC	3 cut(s)	1278, 1807, 2110
CviQI	GTAC	3 cut(s)	1278, 1807, 2110
DdeI	CTNAG	5 cut(s)	245, 354, 1236, 2208, 2445
DpnI	GATC	7 cut(s)	310, 421, 1272, 1436, 1620, 1671, 2154
DpnII	GATC	7 cut(s)	308, 419, 1270, 1434, 1618, 1669, 2152
DraI	TTTAAA	1 cut(s)	1695
EaeI	YGGCCR	1 cut(s)	2419
Eam1104I	CTCTTC	5 cut(s)	810, 1119, 1765, 1888, 1917
EarI	CTCTTC	5 cut(s)	810, 1119, 1765, 1888, 1917
Ecl136II	GAGCTC	1 cut(s)	515
Eco130I	CCWWGG	1 cut(s)	318
Eco24I	GRGCYC	1 cut(s)	517
Eco31I	GGTCTC	1 cut(s)	976
Eco32I	GATATC	1 cut(s)	1296
Eco53kI	GAGCTC	1 cut(s)	515
Eco57I	CTGAAG	2 cut(s)	163, 1613
Eco88I	CYCGRG	1 cut(s)	1335
EcoICRI	GAGCTC	1 cut(s)	515
EcoRI	GAATTC	1 cut(s)	2071
EcoRII	CCWGG	5 cut(s)	517, 1273, 1321, 2380, 2689
EcoRV	GATATC	1 cut(s)	1296
EcoT14I	CCWWGG	1 cut(s)	318
EcoT22I	ATGCAT	3 cut(s)	447, 1702, 2046
EcoT38I	GRGCYC	1 cut(s)	517
ErhI	CCWWGG	1 cut(s)	318
Esp3I	CGTCTC	1 cut(s)	1247
FalI	AAGNNNNNCTT	2 cut(s)	1914, 1946
FaqI	GGGAC	1 cut(s)	898
FauNDI	CATATG	1 cut(s)	2593
FbaI	TGATCA	1 cut(s)	2152
Fnu4HI	GCNGC	6 cut(s)	315, 504, 807, 1287, 1686, 2508
FokI	GGATG	5 cut(s)	454, 479, 641, 1099, 1975
FriOI	GRGCYC	1 cut(s)	517
Fsp4HI	GCNGC	6 cut(s)	315, 504, 807, 1287, 1686, 2508
FspBI	CTAG	8 cut(s)	786, 1086, 1392, 1523, 1826, 1836, 2099, 2361
FspI	TGCGCA	1 cut(s)	1308
GlaI	GCGC	3 cut(s)	502, 1308, 2646
GluI	GCNGC	6 cut(s)	315, 504, 807, 1287, 1686, 2508
GsuI	CTGGAG	2 cut(s)	1161, 1782
HaeIII	GGCC	3 cut(s)	1580, 2421, 2628
HapII	CCGG	5 cut(s)	400, 464, 693, 1161, 2140
HhaI	GCGC	3 cut(s)	503, 1309, 2647
Hin6I	GCGC	3 cut(s)	501, 1307, 2645
HinP1I	GCGC	3 cut(s)	501, 1307, 2645
HincII	GTYRAC	1 cut(s)	2089
HindII	GTYRAC	1 cut(s)	2089
HinfI	GANTC	8 cut(s)	225, 249, 1013, 1312, 1529, 1973, 2265, 2276
HpaII	CCGG	5 cut(s)	400, 464, 693, 1161, 2140
HphI	GGTGA	3 cut(s)	682, 862, 2381
Hpy166II	GTNNAC	6 cut(s)	474, 538, 841, 1077, 1801, 2089
Hpy188III	TCNNGA	9 cut(s)	547, 588, 793, 1161, 1399, 1523, 1556, 1640, 1826
Hpy8I	GTNNAC	6 cut(s)	474, 538, 841, 1077, 1801, 2089
Hpy99I	CGWCG	1 cut(s)	553
HpyAV	CCTTC	6 cut(s)	178, 251, 1320, 1355, 1637, 1987
HpyCH4III	ACNGT	7 cut(s)	299, 305, 1081, 1167, 1264, 1475, 1568
HpyCH4IV	ACGT	1 cut(s)	779
HpyF10VI	GCNNNNNNNGC	9 cut(s)	503, 512, 806, 1622, 1706, 1757, 2195, 2204, 2542
HpyF3I	CTNAG	5 cut(s)	245, 354, 1236, 2208, 2445
HpySE526I	ACGT	1 cut(s)	779
HspAI	GCGC	3 cut(s)	501, 1307, 2645
Kpn2I	TCCGGA	1 cut(s)	1160
Ksp22I	TGATCA	1 cut(s)	2152
Kzo9I	GATC	7 cut(s)	308, 419, 1270, 1434, 1618, 1669, 2152
LguI	GCTCTTC	1 cut(s)	1888
LmnI	GCTCC	6 cut(s)	9, 520, 1180, 1220, 2572, 2697
Lsp1109I	GCAGC	6 cut(s)	301, 490, 793, 1273, 1672, 2494
LweI	GCATC	6 cut(s)	316, 432, 619, 1635, 2218, 2572
MabI	ACCWGGT	1 cut(s)	2689
MaeI	CTAG	8 cut(s)	786, 1086, 1392, 1523, 1826, 1836, 2099, 2361
MaeII	ACGT	1 cut(s)	779
MaeIII	GTNAC	7 cut(s)	182, 299, 770, 1081, 1353, 1465, 2281
MalI	GATC	7 cut(s)	310, 421, 1272, 1436, 1620, 1671, 2154
MboI	GATC	7 cut(s)	308, 419, 1270, 1434, 1618, 1669, 2152
MfeI	CAATTG	1 cut(s)	1794
MflI	RGATCY	2 cut(s)	1270, 1434
MhlI	GDGCHC	1 cut(s)	517
MlyI	GAGTC	1 cut(s)	243
MmeI	TCCRAC	4 cut(s)	641, 708, 1747, 2675
Mph1103I	ATGCAT	3 cut(s)	447, 1702, 2046
MroI	TCCGGA	1 cut(s)	1160
MroXI	GAANNNNTTC	1 cut(s)	735
MseI	TTAA	9 cut(s)	855, 1196, 1200, 1662, 1694, 2174, 2234, 2376, 2702
MslI	CAYNNNNRTG	3 cut(s)	1746, 2394, 2526
MspI	CCGG	5 cut(s)	400, 464, 693, 1161, 2140
MspR9I	CCNGG	6 cut(s)	519, 694, 1275, 1323, 2382, 2691
MunI	CAATTG	1 cut(s)	1794
Mva1269I	GAATGC	1 cut(s)	685
MvaI	CCWGG	5 cut(s)	519, 1275, 1323, 2382, 2691
MvnI	CGCG	2 cut(s)	548, 2645
MwoI	GCNNNNNNNGC	9 cut(s)	503, 512, 806, 1622, 1706, 1757, 2195, 2204, 2542
NciI	CCSGG	1 cut(s)	694
NcoI	CCATGG	1 cut(s)	318
NdeI	CATATG	1 cut(s)	2593
NdeII	GATC	7 cut(s)	308, 419, 1270, 1434, 1618, 1669, 2152
NlaIV	GGNNCC	1 cut(s)	2574
NmeAIII	GCCGAG	1 cut(s)	792
NmuCI	GTSAC	3 cut(s)	182, 1465, 2281
NruI	TCGCGA	1 cut(s)	548
NsbI	TGCGCA	1 cut(s)	1308
NsiI	ATGCAT	3 cut(s)	447, 1702, 2046
NspI	RCATGY	8 cut(s)	236, 963, 1104, 1704, 1807, 1881, 2048, 2614
NspV	TTCGAA	2 cut(s)	214, 1508
PacI	TTAATTAA	1 cut(s)	1200
PaeI	GCATGC	3 cut(s)	1704, 1881, 2048
PaeR7I	CTCGAG	1 cut(s)	1335
PciI	ACATGT	3 cut(s)	959, 1803, 2610
PciSI	GCTCTTC	1 cut(s)	1888
PcsI	WCGNNNNNNNCGW	2 cut(s)	108, 548
PctI	GAATGC	1 cut(s)	685
PdmI	GAANNNNTTC	1 cut(s)	735
PfeI	GAWTC	7 cut(s)	225, 1013, 1312, 1529, 1973, 2265, 2276
PflMI	CCANNNNNTGG	2 cut(s)	1184, 2030
PfoI	TCCNGGA	1 cut(s)	1321
PkrI	GCNGC	6 cut(s)	316, 505, 808, 1288, 1687, 2509
PleI	GAGTC	1 cut(s)	243
PpsI	GAGTC	1 cut(s)	243
PscI	ACATGT	3 cut(s)	959, 1803, 2610
PshBI	ATTAAT	1 cut(s)	1200
PsiI	TTATAA	1 cut(s)	396
Psp124BI	GAGCTC	1 cut(s)	517
Psp6I	CCWGG	5 cut(s)	517, 1273, 1321, 2380, 2689
PspGI	CCWGG	5 cut(s)	517, 1273, 1321, 2380, 2689
PspN4I	GGNNCC	1 cut(s)	2574
PspPI	GGNCC	2 cut(s)	1578, 2626
PspXI	VCTCGAGB	1 cut(s)	1335
PstI	CTGCAG	1 cut(s)	440
PsuI	RGATCY	2 cut(s)	1270, 1434
RruI	TCGCGA	1 cut(s)	548
RsaI	GTAC	3 cut(s)	1279, 1808, 2111
RsaNI	GTAC	3 cut(s)	1278, 1807, 2110
RseI	CAYNNNNRTG	3 cut(s)	1746, 2394, 2526
SacI	GAGCTC	1 cut(s)	517
SapI	GCTCTTC	1 cut(s)	1888
SaqAI	TTAA	9 cut(s)	855, 1196, 1200, 1662, 1694, 2174, 2234, 2376, 2702
SatI	GCNGC	6 cut(s)	315, 504, 807, 1287, 1686, 2508
Sau3AI	GATC	7 cut(s)	308, 419, 1270, 1434, 1618, 1669, 2152
Sau96I	GGNCC	2 cut(s)	1578, 2626
SchI	GAGTC	1 cut(s)	243
ScrFI	CCNGG	6 cut(s)	519, 694, 1275, 1323, 2382, 2691
SduI	GDGCHC	1 cut(s)	517
SexAI	ACCWGGT	1 cut(s)	2689
SfaNI	GCATC	6 cut(s)	316, 432, 619, 1635, 2218, 2572
SfcI	CTRYAG	2 cut(s)	436, 2308
Sfr274I	CTCGAG	1 cut(s)	1335
SfuI	TTCGAA	2 cut(s)	214, 1508
SlaI	CTCGAG	1 cut(s)	1335
SmiMI	CAYNNNNRTG	3 cut(s)	1746, 2394, 2526
SmlI	CTYRAG	2 cut(s)	1335, 1399
SmoI	CTYRAG	2 cut(s)	1335, 1399
SphI	GCATGC	3 cut(s)	1704, 1881, 2048
SspMI	CTAG	8 cut(s)	786, 1086, 1392, 1523, 1826, 1836, 2099, 2361
SstI	GAGCTC	1 cut(s)	517
StyD4I	CCNGG	6 cut(s)	517, 692, 1273, 1321, 2380, 2689
StyI	CCWWGG	1 cut(s)	318
TaaI	ACNGT	7 cut(s)	299, 305, 1081, 1167, 1264, 1475, 1568
TaiI	ACGT	1 cut(s)	782
TaqI	TCGA	8 cut(s)	111, 214, 307, 342, 1336, 1508, 1639, 1848
TaqII	GACCGA	1 cut(s)	573
TatI	WGTACW	2 cut(s)	1806, 2109
TfiI	GAWTC	7 cut(s)	225, 1013, 1312, 1529, 1973, 2265, 2276
Tru1I	TTAA	9 cut(s)	855, 1196, 1200, 1662, 1694, 2174, 2234, 2376, 2702
Tru9I	TTAA	9 cut(s)	855, 1196, 1200, 1662, 1694, 2174, 2234, 2376, 2702
TscAI	CASTG	8 cut(s)	160, 187, 1102, 1152, 1573, 1825, 1893, 2505
TseFI	GTSAC	3 cut(s)	182, 1465, 2281
TseI	GCWGC	6 cut(s)	314, 503, 806, 1286, 1685, 2507
Tsp45I	GTSAC	3 cut(s)	182, 1465, 2281
TspGWI	ACGGA	4 cut(s)	1271, 1745, 2269, 2385
TspRI	CASTG	8 cut(s)	160, 187, 1102, 1152, 1573, 1825, 1893, 2505
Van91I	CCANNNNNTGG	2 cut(s)	1184, 2030
VspI	ATTAAT	1 cut(s)	1200
XbaI	TCTAGA	2 cut(s)	1522, 1825
XceI	RCATGY	8 cut(s)	236, 963, 1104, 1704, 1807, 1881, 2048, 2614
XhoI	CTCGAG	1 cut(s)	1335
XmnI	GAANNNNTTC	1 cut(s)	735
XspI	CTAG	8 cut(s)	786, 1086, 1392, 1523, 1826, 1836, 2099, 2361
Zsp2I	ATGCAT	3 cut(s)	447, 1702, 2046

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.