FvH4_5g29090

Belongs to the glycosyl hydrolase 9 (cellulase E) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0013278
Physical Location & Seq
Forward (+)
20188936 .. 20191909
2974 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g29090.t1

Sequence Viewer

Length: 1878 bp
ATGATGTTCATGAGGAGCTGCACCAAGATTGTATTAGTCTCCCTAGCTTTGTTAGTGCTACTTGGTGTGGAAGCAGCCACTGCGTCAGAGTTCAACTACGGCGAGGCTCTGGACAAGAGTTTGCTCTTTTTTGAGGCACAAAGATCTGGTAAGCTGCCACCAAACCAGCGAGTCAAGTGGCGCGGTGACTCAGGACTTAAGGATGGCCTAGCTCAAGGGGTGGACCTGGTTGGAGGGTATTATGATGCAGGGGATCATGTTAAATTTGGACTGCCAATGGCATTCACAGTGACAATGCTATCATGGGGAGCTATTGAGTTCAGGAAGGAGATCACAGATTTAGATCAATTAGGTCAGACCTTATGGGCCATTAGATGGGGCACTGACTATTTCATCAAGGCACATCCACAGCCTAATGTTCTCTGGGGACAGGTAGGAGATGGGAACTCCGATCATTATTGTTGGGAGCGCGCAGAGGACATGACAACTCCAAGAAATGCTTACAAAATTGATGAAAGTCATCCCGGTTCAGACATTGCTGGTGAAACTGCAGCTGCCTTGGCCTCAGCCGCCATGGCTTTCAAGCCTTACAACTCTTCCTACTCCAGTCTCCTCTTAGTTCATGCAAAACAGCTTTTCTCATTTGCAGATAGATTCAGAGGATTATATGATGAAACCATTGAGGATGCTAAGGAATTCTACACTTCATCGGGTTACTCTGATGAGCTGCTATGGGCTGCGGCATGGCTCTACGAAGCAACCAACGATGACTACTACCTCAAGTATGTGGTGGACAACGCCGTGTATATGGGTGGAACTGGATGGTCAGTCAAAGAGTTTTCTTGGGATAACAAATATGCTGGTGTCCAAATCCTTCTTACAAAGGTTTTGCTAGAGGGAAGAGGTGGTGCATATACTTCCACACTGAAACAGTACCAGGCCAAAGCAGATTATTTTGCCTGTGCTTGTCTGCAGAAAAATGATGGCTACAATGTCCACACAACTCCTGGGGGCTTATTATACGTGCGAGAATGGAACAACTTGCAGTATGTTAGTTCGGCTTCATTTCTTCTAGCTGTTTACTCCGACTATCTCTCTGCTGCAAATGCCAAGCTCAATTGTCCGGAAGGAGAAGTTCAACCTCAAGAGATCCTCAATTTTGCAAAGTCACAGGCCGATTACATTCTTGGTAAAAATCCCAAGTCCATGAGCTACATAGTTGGGTATGGAGCAAAGTATCCGGTTCATGTGCACCACAGAGATGCTTCAATTCCTTCCATATCAGTTCTTAGTGCTGTGGTTGGATGTGTACAAGGATTTGAGACATGGTATCACCGCACTGAGGGAAATCCTAATGTCATTTATGGGGGACTTGTGGGAGGTCCTGACCAGAATGACAACTTCTCCGATGACCGGTCCAACTACGAAGGGACAGAGCCTACAATTTCTGGCACTGGTCCGCTTGTAGGCCTCTTCTCCAAGTTACAGAGTTTAAATGGTGGTTTCAACAGAGGATCACCAAAGCCCCATACACCCACACCAAGTGTCTATCACAATGAAACAACAGCACCCCCAAAACCAGCAGATACTCATCCTATCAAATTCCTTCACTCCATAACTAGCACATGGACTATTGCAAAAACAAGTTATTATCGACACAAGGTGGTACTAAAGAACACATCTGAGAAACCGATAACGAATATGAAGCTGGTGCTTGAAAACCTTGAAGGGCCACTGTGGGGTCTCTCTCCAACTCCACAGAAGAACACATATGAGCTTCCTCAATGGCAGAAAGTCCTGCAGCCTGGCGCCGAGTGCACTTTTGTTTACGTTCAAGGTGGCCCTCAGGCAAAGATATCTATTCAAAGCTACAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00500 ko01100 map00500 map01100
Pfam Domains
Protein Families
CBM49 Glyco_hydro_9

Protein Analysis

626

Amino Acids

69.26

Weight (kDa)

5.87

Isoelectric Point (pI)

31.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_9 PF00759 33 - 491 2.6e-167 Glycosyl hydrolase family 9
CBM49 PF09478 533 - 612 1.2e-22 Carbohydrate binding domain CBM49
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013278)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48930
fragaria_vesca FvH4_5g29090
malus_domestica MD16G1001700.v1.1
prunus_persica Prupe.1G346900_v2.0.a1
pyrus_communis pycom16g00390
rosa_chinensis RchiOBHm_Chr7g0221721 RchiOBHm_Chr7g0221731
rosa_laevigata RLG00000002135
rosa_multiflora Rmu_co8400965.1_g000001 Rmu_sc0003311.1_g000002
rosa_roxburghii Rroxscaffold_3G00238090
rosa_rugosa Rorug07G0203000
rosa_samantha Rh7AG343900 Rh7BG334300 Rh7CG361300 Rh7DG341700
rosa_wichuraiana Rw0G003250 Rw7G029160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1808
AccB7I CCANNNNNTGG 1 cut(s) 375
AccII CGCG 2 cut(s) 183, 471
AccIII TCCGGA 1 cut(s) 1123
AciI CCGC 5 cut(s) 183, 570, 740, 1336, 1460
AclWI GGATC 3 cut(s) 261, 1144, 1522
AcsI RAATTY 3 cut(s) 263, 695, 1601
AcyI GRCGYC 1 cut(s) 1809
AdeI CACNNNGTG 2 cut(s) 1544, 1663
AfaI GTAC 3 cut(s) 935, 1311, 1668
AfiI CCNNNNNNNGG 5 cut(s) 375, 1342, 1413, 1466, 1739
AflII CTTAAG 1 cut(s) 197
AgeI ACCGGT 1 cut(s) 1413
AgsI TTSAA 9 cut(s) 94, 583, 1139, 1269, 1507, 1718, 1727, 1835, 1865
AjnI CCWGG 4 cut(s) 225, 936, 1006, 1804
Alw21I GWGCWC 2 cut(s) 1254, 1820
Alw26I GTCTC 4 cut(s) 43, 614, 1316, 1748
Alw44I GTGCAC 2 cut(s) 1250, 1816
AlwI GGATC 3 cut(s) 261, 1144, 1522
AlwNI CAGNNNCTG 1 cut(s) 80
Aor13HI TCCGGA 1 cut(s) 1123
AoxI GGCC 8 cut(s) 205, 366, 561, 939, 1173, 1468, 1730, 1840
ApaLI GTGCAC 2 cut(s) 1250, 1816
ApeKI GCWGC 9 cut(s) 18, 74, 154, 551, 554, 727, 737, 1100, 1801
ApoI RAATTY 3 cut(s) 263, 695, 1601
AsiGI ACCGGT 1 cut(s) 1413
AspLEI GCGC 4 cut(s) 183, 471, 473, 1811
AspS9I GGNCC 7 cut(s) 223, 366, 1382, 1416, 1457, 1730, 1841
AsuC2I CCSGG 1 cut(s) 525
AsuHPI GGTGA 4 cut(s) 197, 554, 1325, 1509
AvaII GGWCC 4 cut(s) 223, 1382, 1416, 1457
AxyI CCTNAGG 1 cut(s) 1845
BaeGI GKGCMC 3 cut(s) 383, 1254, 1820
BanI GGYRCC 1 cut(s) 1808
Bbv12I GWGCWC 2 cut(s) 1254, 1820
BbvCI CCTCAGC 1 cut(s) 565
BbvI GCAGC 9 cut(s) 5, 86, 141, 541, 563, 714, 724, 1087, 1813
BccI CCATC 5 cut(s) 197, 369, 434, 816, 977
BceAI ACGGC 2 cut(s) 115, 785
BciT130I CCWGG 4 cut(s) 227, 938, 1008, 1806
BciVI GTATCC 1 cut(s) 1248
BcnI CCSGG 1 cut(s) 525
BcoDI GTCTC 4 cut(s) 43, 614, 1316, 1748
BfaI CTAG 5 cut(s) 44, 209, 893, 1073, 1620
BfmI CTRYAG 3 cut(s) 549, 971, 1799
BfoI RGCGCY 1 cut(s) 1812
BfrI CTTAAG 1 cut(s) 197
BfuI GTATCC 1 cut(s) 1248
BglI GCCNNNNNGGC 1 cut(s) 575
BglII AGATCT 1 cut(s) 143
Bme1390I CCNGG 5 cut(s) 227, 525, 938, 1008, 1806
Bme18I GGWCC 4 cut(s) 223, 1382, 1416, 1457
BmgT120I GGNCC 7 cut(s) 223, 366, 1382, 1416, 1457, 1730, 1841
BmiI GGNNCC 1 cut(s) 1810
BmrFI CCNGG 5 cut(s) 227, 525, 938, 1008, 1806
BmsI GCATC 3 cut(s) 235, 676, 1252
BpmI CTGGAG 1 cut(s) 589
Bpu10I CCTNAGC 2 cut(s) 565, 690
BpuEI CTTGAG 3 cut(s) 198, 764, 1128
BpuMI CCSGG 1 cut(s) 525
BsaAI YACGTR 1 cut(s) 1024
BsaBI GATNNNNATC 2 cut(s) 342, 1590
BsaHI GRCGYC 1 cut(s) 1809
BsaI GGTCTC 1 cut(s) 1748
BsaJI CCNNGG 3 cut(s) 558, 573, 1007
BsaWI WCCGGW 3 cut(s) 1123, 1240, 1413
BsaXI ACNNNNNCTCC 2 cut(s) 1388, 1418
Bsc4I CCNNNNNNNGG 5 cut(s) 375, 1342, 1413, 1466, 1739
Bse118I RCCGGY 1 cut(s) 1413
Bse1I ACTGG 3 cut(s) 606, 823, 1459
Bse21I CCTNAGG 1 cut(s) 1845
Bse3DI GCAATG 1 cut(s) 534
Bse8I GATNNNNATC 2 cut(s) 342, 1590
BseAI TCCGGA 1 cut(s) 1123
BseBI CCWGG 4 cut(s) 227, 938, 1008, 1806
BseDI CCNNGG 3 cut(s) 558, 573, 1007
BseGI GGATG 7 cut(s) 208, 403, 520, 691, 827, 1310, 1591
BseJI GATNNNNATC 2 cut(s) 342, 1590
BseLI CCNNNNNNNGG 5 cut(s) 375, 1342, 1413, 1466, 1739
BseMI GCAATG 1 cut(s) 534
BseMII CTCAG 5 cut(s) 204, 579, 1332, 1674, 1859
BseNI ACTGG 3 cut(s) 606, 823, 1459
BsePI GCGCGC 1 cut(s) 469
BseRI GAGGAG 2 cut(s) 28, 602
BseSI GKGCMC 3 cut(s) 383, 1254, 1820
BseXI GCAGC 9 cut(s) 5, 86, 141, 541, 563, 714, 724, 1087, 1813
BsgI GTGCAG 1 cut(s) 4
Bsh1236I CGCG 2 cut(s) 183, 471
BshFI GGCC 8 cut(s) 207, 368, 563, 941, 1175, 1470, 1732, 1842
BshNI GGYRCC 1 cut(s) 1808
BshTI ACCGGT 1 cut(s) 1413
BsiHKAI GWGCWC 2 cut(s) 1254, 1820
BsiSI CCGG 4 cut(s) 525, 1124, 1241, 1414
BslFI GGGAC 3 cut(s) 441, 1383, 1444
BslI CCNNNNNNNGG 5 cut(s) 375, 1342, 1413, 1466, 1739
BsmAI GTCTC 4 cut(s) 43, 614, 1316, 1748
BsmFI GGGAC 3 cut(s) 441, 1383, 1444
BsmI GAATGC 1 cut(s) 281
BsnI GGCC 8 cut(s) 207, 368, 563, 941, 1175, 1470, 1732, 1842
Bso31I GGTCTC 1 cut(s) 1748
Bsp1286I GDGCHC 3 cut(s) 383, 1254, 1820
Bsp13I TCCGGA 1 cut(s) 1123
Bsp1407I TGTACA 1 cut(s) 1309
Bsp143I GATC 7 cut(s) 143, 253, 330, 343, 451, 1149, 1514
Bsp19I CCATGG 1 cut(s) 573
BspACI CCGC 5 cut(s) 183, 570, 740, 1336, 1460
BspANI GGCC 8 cut(s) 207, 368, 563, 941, 1175, 1470, 1732, 1842
BspCNI CTCAG 5 cut(s) 203, 578, 1333, 1675, 1858
BspEI TCCGGA 1 cut(s) 1123
BspFNI CGCG 2 cut(s) 183, 471
BspHI TCATGA 1 cut(s) 9
BspLI GGNNCC 1 cut(s) 1810
BspMAI CTGCAG 3 cut(s) 553, 975, 1803
BspPI GGATC 3 cut(s) 261, 1144, 1522
BspT107I GGYRCC 1 cut(s) 1808
BspTI CTTAAG 1 cut(s) 197
BspTNI GGTCTC 1 cut(s) 1748
BsrDI GCAATG 1 cut(s) 534
BsrFI RCCGGY 1 cut(s) 1413
BsrGI TGTACA 1 cut(s) 1309
BsrI ACTGG 3 cut(s) 606, 823, 1459
BssAI RCCGGY 1 cut(s) 1413
BssECI CCNNGG 3 cut(s) 558, 573, 1007
BssHII GCGCGC 1 cut(s) 469
BssMI GATC 7 cut(s) 143, 253, 330, 343, 451, 1149, 1514
BssNI GRCGYC 1 cut(s) 1809
BssT1I CCWWGG 2 cut(s) 558, 573
Bst2UI CCWGG 4 cut(s) 227, 938, 1008, 1806
Bst4CI ACNGT 3 cut(s) 289, 933, 1737
Bst6I CTCTTC 3 cut(s) 601, 895, 1478
BstACI GRCGYC 1 cut(s) 1809
BstAFI CTTAAG 1 cut(s) 197
BstAPI GCANNNNNTGC 1 cut(s) 80
BstAUI TGTACA 1 cut(s) 1309
BstBAI YACGTR 1 cut(s) 1024
BstC8I GCNNGC 1 cut(s) 471
BstDEI CTNAG 8 cut(s) 190, 565, 616, 690, 1289, 1341, 1683, 1845
BstDSI CCRYGG 1 cut(s) 573
BstF5I GGATG 7 cut(s) 208, 403, 520, 691, 827, 1310, 1591
BstFNI CGCG 2 cut(s) 183, 471
BstH2I RGCGCY 1 cut(s) 1812
BstHHI GCGC 4 cut(s) 183, 471, 473, 1811
BstKTI GATC 7 cut(s) 146, 256, 333, 346, 454, 1152, 1517
BstMAI GTCTC 4 cut(s) 43, 614, 1316, 1748
BstMBI GATC 7 cut(s) 143, 253, 330, 343, 451, 1149, 1514
BstMWI GCNNNNNNNGC 6 cut(s) 80, 560, 569, 575, 1106, 1815
BstNI CCWGG 4 cut(s) 227, 938, 1008, 1806
BstSCI CCNGG 5 cut(s) 225, 523, 936, 1006, 1804
BstSFI CTRYAG 3 cut(s) 549, 971, 1799
BstSLI GKGCMC 3 cut(s) 383, 1254, 1820
BstUI CGCG 2 cut(s) 183, 471
BstV1I GCAGC 9 cut(s) 5, 86, 141, 541, 563, 714, 724, 1087, 1813
BstX2I RGATCY 2 cut(s) 143, 1149
BstYI RGATCY 2 cut(s) 143, 1149
Bsu36I CCTNAGG 1 cut(s) 1845
BsuI GTATCC 1 cut(s) 1248
BsuRI GGCC 8 cut(s) 207, 368, 563, 941, 1175, 1470, 1732, 1842
BtgI CCRYGG 1 cut(s) 573
BtsCI GGATG 7 cut(s) 208, 403, 520, 691, 827, 1310, 1591
BtsI GCAGTG 1 cut(s) 78
BtsIMutI CAGTG 7 cut(s) 78, 294, 381, 923, 1338, 1452, 1733
Cac8I GCNNGC 1 cut(s) 471
CaiI CAGNNNCTG 1 cut(s) 80
CciI TCATGA 1 cut(s) 9
CfoI GCGC 4 cut(s) 183, 471, 473, 1811
Cfr10I RCCGGY 1 cut(s) 1413
Cfr13I GGNCC 7 cut(s) 223, 366, 1382, 1416, 1457, 1730, 1841
CseI GACGC 1 cut(s) 72
CsiI ACCWGGT 1 cut(s) 225
Csp6I GTAC 3 cut(s) 934, 1310, 1667
CspAI ACCGGT 1 cut(s) 1413
CviQI GTAC 3 cut(s) 934, 1310, 1667
DdeI CTNAG 8 cut(s) 190, 565, 616, 690, 1289, 1341, 1683, 1845
DinI GGCGCC 1 cut(s) 1810
DpnI GATC 7 cut(s) 145, 255, 332, 345, 453, 1151, 1516
DpnII GATC 7 cut(s) 143, 253, 330, 343, 451, 1149, 1514
DraI TTTAAA 1 cut(s) 1494
DraIII CACNNNGTG 2 cut(s) 1544, 1663
Eam1104I CTCTTC 3 cut(s) 601, 895, 1478
EarI CTCTTC 3 cut(s) 601, 895, 1478
Eco130I CCWWGG 2 cut(s) 558, 573
Eco147I AGGCCT 1 cut(s) 1470
Eco31I GGTCTC 1 cut(s) 1748
Eco32I GATATC 1 cut(s) 1857
Eco47I GGWCC 4 cut(s) 223, 1382, 1416, 1457
Eco81I CCTNAGG 1 cut(s) 1845
EcoO109I RGGNCCY 1 cut(s) 1382
EcoRI GAATTC 1 cut(s) 695
EcoRII CCWGG 4 cut(s) 225, 936, 1006, 1804
EcoRV GATATC 1 cut(s) 1857
EcoT14I CCWWGG 2 cut(s) 558, 573
EgeI GGCGCC 1 cut(s) 1810
EheI GGCGCC 1 cut(s) 1810
ErhI CCWWGG 2 cut(s) 558, 573
FalI AAGNNNNNCTT 2 cut(s) 484, 516
FaqI GGGAC 3 cut(s) 441, 1383, 1444
FauNDI CATATG 1 cut(s) 1771
FokI GGATG 7 cut(s) 215, 390, 507, 698, 834, 1317, 1578
FspBI CTAG 5 cut(s) 44, 209, 893, 1073, 1620
GlaI GCGC 4 cut(s) 182, 470, 472, 1810
GsuI CTGGAG 1 cut(s) 589
HaeII RGCGCY 1 cut(s) 1812
HaeIII GGCC 8 cut(s) 207, 368, 563, 941, 1175, 1470, 1732, 1842
HapII CCGG 4 cut(s) 525, 1124, 1241, 1414
HgaI GACGC 1 cut(s) 72
HhaI GCGC 4 cut(s) 183, 471, 473, 1811
Hin1I GRCGYC 1 cut(s) 1809
Hin6I GCGC 4 cut(s) 181, 469, 471, 1809
HinP1I GCGC 4 cut(s) 181, 469, 471, 1809
HinfI GANTC 3 cut(s) 171, 188, 654
HpaII CCGG 4 cut(s) 525, 1124, 1241, 1414
HphI GGTGA 4 cut(s) 197, 554, 1325, 1509
Hpy166II GTNNAC 8 cut(s) 223, 793, 997, 1081, 1252, 1310, 1818, 1828
Hpy188I TCNGA 9 cut(s) 88, 357, 451, 532, 659, 721, 1087, 1408, 1684
Hpy188III TCNNGA 7 cut(s) 10, 110, 192, 322, 1124, 1145, 1385
Hpy8I GTNNAC 8 cut(s) 223, 793, 997, 1081, 1252, 1310, 1818, 1828
HpyAV CCTTC 7 cut(s) 319, 884, 1121, 1284, 1421, 1616, 1721
HpyCH4III ACNGT 3 cut(s) 289, 933, 1737
HpyCH4IV ACGT 2 cut(s) 1023, 1830
HpyF10VI GCNNNNNNNGC 6 cut(s) 80, 560, 569, 575, 1106, 1815
HpyF3I CTNAG 8 cut(s) 190, 565, 616, 690, 1289, 1341, 1683, 1845
HpySE526I ACGT 2 cut(s) 1023, 1830
Hsp92I GRCGYC 1 cut(s) 1809
HspAI GCGC 4 cut(s) 181, 469, 471, 1809
KasI GGCGCC 1 cut(s) 1808
Kpn2I TCCGGA 1 cut(s) 1123
Kzo9I GATC 7 cut(s) 143, 253, 330, 343, 451, 1149, 1514
LmnI GCTCC 4 cut(s) 15, 308, 466, 1229
Lsp1109I GCAGC 9 cut(s) 5, 86, 141, 541, 563, 714, 724, 1087, 1813
LweI GCATC 3 cut(s) 235, 676, 1252
MabI ACCWGGT 1 cut(s) 225
MaeI CTAG 5 cut(s) 44, 209, 893, 1073, 1620
MaeII ACGT 2 cut(s) 1023, 1830
MaeIII GTNAC 5 cut(s) 185, 289, 713, 1167, 1482
MalI GATC 7 cut(s) 145, 255, 332, 345, 453, 1151, 1516
MboI GATC 7 cut(s) 143, 253, 330, 343, 451, 1149, 1514
MboII GAAGA 5 cut(s) 588, 912, 1061, 1465, 1774
MfeI CAATTG 2 cut(s) 1117, 1873
MflI RGATCY 2 cut(s) 143, 1149
MhlI GDGCHC 3 cut(s) 383, 1254, 1820
Mly113I GGCGCC 1 cut(s) 1809
MlyI GAGTC 2 cut(s) 180, 182
MmeI TCCRAC 5 cut(s) 211, 1110, 1282, 1443, 1775
MroI TCCGGA 1 cut(s) 1123
MseI TTAA 3 cut(s) 198, 261, 1493
MslI CAYNNNNRTG 1 cut(s) 1260
MspA1I CMGCKG 1 cut(s) 554
MspCI CTTAAG 1 cut(s) 197
MspI CCGG 4 cut(s) 525, 1124, 1241, 1414
MspR9I CCNGG 5 cut(s) 227, 525, 938, 1008, 1806
MunI CAATTG 2 cut(s) 1117, 1873
Mva1269I GAATGC 1 cut(s) 281
MvaI CCWGG 4 cut(s) 227, 938, 1008, 1806
MvnI CGCG 2 cut(s) 183, 471
MwoI GCNNNNNNNGC 6 cut(s) 80, 560, 569, 575, 1106, 1815
NarI GGCGCC 1 cut(s) 1809
NciI CCSGG 1 cut(s) 525
NcoI CCATGG 1 cut(s) 573
NdeI CATATG 1 cut(s) 1771
NdeII GATC 7 cut(s) 143, 253, 330, 343, 451, 1149, 1514
NlaIV GGNNCC 1 cut(s) 1810
NmeAIII GCCGAG 1 cut(s) 1837
NmuCI GTSAC 3 cut(s) 185, 289, 1167
PagI TCATGA 1 cut(s) 9
PauI GCGCGC 1 cut(s) 469
PceI AGGCCT 1 cut(s) 1470
PctI GAATGC 1 cut(s) 281
PfeI GAWTC 1 cut(s) 654
PflMI CCANNNNNTGG 1 cut(s) 375
PinAI ACCGGT 1 cut(s) 1413
PleI GAGTC 2 cut(s) 179, 182
PluTI GGCGCC 1 cut(s) 1812
PpsI GAGTC 2 cut(s) 179, 182
Ppu21I YACGTR 1 cut(s) 1024
PpuMI RGGWCCY 1 cut(s) 1382
Psp5II RGGWCCY 1 cut(s) 1382
Psp6I CCWGG 4 cut(s) 225, 936, 1006, 1804
PspGI CCWGG 4 cut(s) 225, 936, 1006, 1804
PspN4I GGNNCC 1 cut(s) 1810
PspPI GGNCC 7 cut(s) 223, 366, 1382, 1416, 1457, 1730, 1841
PspPPI RGGWCCY 1 cut(s) 1382
PstI CTGCAG 3 cut(s) 553, 975, 1803
PstNI CAGNNNCTG 1 cut(s) 80
PsuI RGATCY 2 cut(s) 143, 1149
PteI GCGCGC 1 cut(s) 469
PvuII CAGCTG 1 cut(s) 554
RsaI GTAC 3 cut(s) 935, 1311, 1668
RsaNI GTAC 3 cut(s) 934, 1310, 1667
RseI CAYNNNNRTG 1 cut(s) 1260
SaqAI TTAA 3 cut(s) 198, 261, 1493
Sau3AI GATC 7 cut(s) 143, 253, 330, 343, 451, 1149, 1514
Sau96I GGNCC 7 cut(s) 223, 366, 1382, 1416, 1457, 1730, 1841
SchI GAGTC 2 cut(s) 180, 182
ScrFI CCNGG 5 cut(s) 227, 525, 938, 1008, 1806
SduI GDGCHC 3 cut(s) 383, 1254, 1820
SexAI ACCWGGT 1 cut(s) 225
SfaNI GCATC 3 cut(s) 235, 676, 1252
SfcI CTRYAG 3 cut(s) 549, 971, 1799
SfoI GGCGCC 1 cut(s) 1810
SinI GGWCC 4 cut(s) 223, 1382, 1416, 1457
SmiMI CAYNNNNRTG 1 cut(s) 1260
SmlI CTYRAG 4 cut(s) 197, 213, 779, 1143
SmoI CTYRAG 4 cut(s) 197, 213, 779, 1143
SseBI AGGCCT 1 cut(s) 1470
SsiI CCGC 5 cut(s) 183, 570, 740, 1336, 1460
SspDI GGCGCC 1 cut(s) 1808
SspMI CTAG 5 cut(s) 44, 209, 893, 1073, 1620
StuI AGGCCT 1 cut(s) 1470
StyD4I CCNGG 5 cut(s) 225, 523, 936, 1006, 1804
StyI CCWWGG 2 cut(s) 558, 573
TaaI ACNGT 3 cut(s) 289, 933, 1737
TaiI ACGT 2 cut(s) 1026, 1833
TaqI TCGA 1 cut(s) 1654
TatI WGTACW 1 cut(s) 1309
TauI GCSGC 2 cut(s) 572, 743
TfiI GAWTC 1 cut(s) 654
Tru1I TTAA 3 cut(s) 198, 261, 1493
Tru9I TTAA 3 cut(s) 198, 261, 1493
TscAI CASTG 7 cut(s) 85, 294, 388, 930, 1345, 1459, 1740
TseFI GTSAC 3 cut(s) 185, 289, 1167
TseI GCWGC 9 cut(s) 18, 74, 154, 551, 554, 727, 737, 1100, 1801
Tsp45I GTSAC 3 cut(s) 185, 289, 1167
TspDTI ATGAA 9 cut(s) 382, 528, 611, 687, 696, 1053, 1235, 1572, 1718
TspRI CASTG 7 cut(s) 85, 294, 388, 930, 1345, 1459, 1740
Van91I CCANNNNNTGG 1 cut(s) 375
Vha464I CTTAAG 1 cut(s) 197
VneI GTGCAC 2 cut(s) 1250, 1816
VpaK11BI GGWCC 4 cut(s) 223, 1382, 1416, 1457
XapI RAATTY 3 cut(s) 263, 695, 1601
XcmI CCANNNNNNNNNTGG 1 cut(s) 1004
XspI CTAG 5 cut(s) 44, 209, 893, 1073, 1620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.