Prupe.1G346900_v2.0.a1

Belongs to the glycosyl hydrolase 9 (cellulase E) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0013278
Physical Location & Seq
Reverse (-)
32427595 .. 32430525
2931 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G346900.1

Sequence Viewer

Length: 1776 bp
ATGAGGAACTGCAAGCTTACACCGTGCGTCTTGGTAGCATTGCTACTAGTTGGAGTTCTTCACCTAGAAGCAGCCATGGCCACGGACTTCACCTATGGCGAGGCTCTTGACAAGAGCTTGATGTTTTTCGAGGCACAGAGGTCAGGGAAACTGCCCTCAGACCAGCGAGTCAAATGGCGCGGTGACTCGGGACTCACGGACGGCCTTGCTCAAGGGGTGAACTTGGTTGGAGGGTATTATGATGCAGGGGATCATGTGAAATTTGGACTGCCGATGGCATTTACAGTGACAATGCTTTCATGGGGAGCTATTGAGTTCAGGAAGGAAATCACAGATTTAGCCCAAATGGGTCAAACATTATGGGCCATCCGATGGGGCACTGACTATTTCATGAAAGCACATCCACAACCTAATGTTCTCTGGGGACAGGTAGGAGATGGGGATTCGGATCACTATTGCTGGGAGCGTCCAGAAGACATGACAACTCCAAGAACTGCGTACAAGATTGATGAAAATCATCCTGGTTCAGACCTTGCTGGAGAAACTGCAGCTGCCTTGGCATCAGCTGCCATAGCTTTCCAGCCTTACAACTCGTCCTACTCTGCTCTCCTCCTAGTTCATGCAAAGCAGCTCTTCACGTTTGCGGATAGATTCAGAGGTCTATATGATGAGTCCATTGGGTCTGCTAAGAACTTCTATACTTCATCAGGCTACTCGGATGAACTACTATGGGCTGCTGCATGGCTTTACCAAGCAACGAACGAAGAGTACTACCTCAAGTATGTGGTGGACAACGCCGTGTATATGGGAGGAACTGGATGGGCTGTCAAAGAATTCTCTTGGGACAACAAGTATGCTGGTGTCCAAATCCTTCTCTCCAAGGTGTTGTTGGAGGGCAAAGGTGGTGCTTATACTTCCACCCTCAAGCAATATCAGGCCAAAGCAGATTACTTTGCCTGCGCTTGTCTCCAAAAAAATGAAGGCTACAATGTCTACAAAACTCCCGGGGGGCTATTGTACGTGCGTGAATGGAACAACTTGCAGTATGTGACTTCTGCATCATTTCTTCTAGCTGTTTACTCTGAATATCTCTCTGCTGCAAATGCCAAGCTCACTTGCCCGGAAGGACAAATTCAACCTCAAGAGCTTCTGAGTTTTGCAAAGTCACAGGCAGACTACATACTTGGTAAAAACCCCAAGTCAATGAGCTATATAGTTGGGTTTGGCTCAAAATATCCAGTTCATGTGCACCACAGAGGTGCTTCCATTCCGGATGTGTCTGTCCTGCAGTCTGTGGTTGGATGTGTGCAAGGATTTGAGACATGGTATCATCGCCCCCAGGCAAATCCTAATGTCATCTATGGCGCCCTTGTGGGAGGTCCTGACCAGAATGACAACTTCTCTGACGACCGCTCCTCTTACGAAGAGACTGAGCCTACACTTTCTGGCTCTGGTCCCCTTATTGGCCTCTTCTCTAAGTTGCAAAGCACCCCAATCAAATTCATTCACTCAATAAGCAACACATGGTCTATTGGAAAAATGACATATTATCGCCACAAGGTGATATTGAAGAACACATCGCAGAAACCAGTAACAGATGTTAAGCTGATGATTGAAAACCTGCAAGGGCCTTTATGGGGTCTCTCTCCAACTCCGGAAAAGAACACCTATGAGCTTCTTCAATGGCAAAAGGTCTTGCAGCCTGCCTCAGAGTGCACTTTCGTTTACATCCAAGGTGGCCCTCAAGCAAAGATTTCCATCCTAAGCTACCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00500 ko01100 map00500 map01100
Pfam Domains
Protein Families
CBM49 Glyco_hydro_9

Protein Analysis

592

Amino Acids

65.72

Weight (kDa)

6.03

Isoelectric Point (pI)

34.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013278)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48930
fragaria_vesca FvH4_5g29090
malus_domestica MD16G1001700.v1.1
prunus_persica Prupe.1G346900_v2.0.a1
pyrus_communis pycom16g00390
rosa_chinensis RchiOBHm_Chr7g0221721 RchiOBHm_Chr7g0221731
rosa_laevigata RLG00000002135
rosa_multiflora Rmu_co8400965.1_g000001 Rmu_sc0003311.1_g000002
rosa_roxburghii Rroxscaffold_3G00238090
rosa_rugosa Rorug07G0203000
rosa_samantha Rh7AG343900 Rh7BG334300 Rh7CG361300 Rh7DG341700
rosa_wichuraiana Rw0G003250 Rw7G029160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 167
Acc36I ACCTGC 1 cut(s) 1629
AccB1I GGYRCC 1 cut(s) 1364
AccB7I CCANNNNNTGG 1 cut(s) 372
AccBSI CCGCTC 1 cut(s) 1413
AccI GTMKAC 1 cut(s) 993
AccII CGCG 1 cut(s) 180
AccIII TCCGGA 2 cut(s) 1270, 1654
AciI CCGC 3 cut(s) 180, 644, 1411
AclWI GGATC 2 cut(s) 258, 456
AcoI YGGCCR 1 cut(s) 78
AcsI RAATTY 4 cut(s) 260, 833, 1131, 1499
AcyI GRCGYC 1 cut(s) 1365
AdeI CACNNNGTG 1 cut(s) 1561
AfaI GTAC 3 cut(s) 500, 770, 1019
AfiI CCNNNNNNNGG 3 cut(s) 372, 1463, 1637
AgsI TTSAA 4 cut(s) 1136, 1570, 1616, 1682
AhlI ACTAGT 1 cut(s) 46
AjnI CCWGG 2 cut(s) 520, 1338
AleI CACNNNNGTG 1 cut(s) 1257
Alw21I GWGCWC 2 cut(s) 1251, 1718
Alw26I GTCTC 4 cut(s) 971, 1313, 1421, 1646
Alw44I GTGCAC 2 cut(s) 1247, 1714
AlwI GGATC 2 cut(s) 258, 456
Ama87I CYCGRG 2 cut(s) 187, 1004
Aor13HI TCCGGA 2 cut(s) 1270, 1654
AoxI GGCC 7 cut(s) 78, 202, 363, 936, 1465, 1628, 1738
ApaLI GTGCAC 2 cut(s) 1247, 1714
ApeKI GCWGC 9 cut(s) 71, 548, 551, 566, 628, 734, 737, 1097, 1699
ApoI RAATTY 4 cut(s) 260, 833, 1131, 1499
AspLEI GCGC 3 cut(s) 180, 962, 1367
AspS9I GGNCC 5 cut(s) 363, 1379, 1454, 1628, 1739
AsuC2I CCSGG 3 cut(s) 1005, 1006, 1121
AsuHPI GGTGA 5 cut(s) 53, 82, 194, 229, 1573
AvaI CYCGRG 2 cut(s) 187, 1004
AvaII GGWCC 2 cut(s) 1379, 1454
BaeGI GKGCMC 3 cut(s) 380, 1251, 1718
BalI TGGCCA 1 cut(s) 80
BanI GGYRCC 1 cut(s) 1364
BbsI GAAGAC 1 cut(s) 480
Bbv12I GWGCWC 2 cut(s) 1251, 1718
BbvI GCAGC 9 cut(s) 83, 538, 553, 560, 640, 721, 724, 1084, 1711
BccI CCATC 6 cut(s) 268, 366, 374, 431, 813, 1766
BceAI ACGGC 2 cut(s) 217, 782
BciT130I CCWGG 2 cut(s) 522, 1340
BcnI CCSGG 3 cut(s) 1005, 1006, 1121
BcoDI GTCTC 4 cut(s) 971, 1313, 1421, 1646
BcuI ACTAGT 1 cut(s) 46
BfaI CTAG 4 cut(s) 47, 65, 614, 1070
BfmI CTRYAG 2 cut(s) 546, 1286
BfoI RGCGCY 1 cut(s) 1368
BfuAI ACCTGC 1 cut(s) 1629
BisI GCNGC 9 cut(s) 72, 549, 552, 567, 629, 735, 738, 1098, 1700
BlsI GCNGC 9 cut(s) 73, 550, 553, 568, 630, 736, 739, 1099, 1701
BmcAI AGTACT 1 cut(s) 770
Bme1390I CCNGG 5 cut(s) 522, 1005, 1006, 1121, 1340
Bme18I GGWCC 2 cut(s) 1379, 1454
BmeT110I CYCGRG 2 cut(s) 187, 1004
BmgT120I GGNCC 5 cut(s) 363, 1379, 1454, 1628, 1739
BmiI GGNNCC 2 cut(s) 1366, 1456
BmrFI CCNGG 5 cut(s) 522, 1005, 1006, 1121, 1340
BmsI GCATC 3 cut(s) 232, 569, 1067
BpiI GAAGAC 1 cut(s) 480
BpmI CTGGAG 1 cut(s) 558
Bpu10I CCTNAGC 1 cut(s) 1763
BpuEI CTTGAG 5 cut(s) 195, 761, 908, 1125, 1728
BpuMI CCSGG 3 cut(s) 1005, 1006, 1121
BsaAI YACGTR 1 cut(s) 1021
BsaBI GATNNNNATC 3 cut(s) 447, 513, 1757
BsaHI GRCGYC 1 cut(s) 1365
BsaI GGTCTC 1 cut(s) 1646
BsaJI CCNNGG 8 cut(s) 75, 81, 555, 879, 1004, 1005, 1338, 1732
BsaWI WCCGGW 2 cut(s) 1270, 1654
BsaXI ACNNNNNCTCC 2 cut(s) 1397, 1427
Bsc4I CCNNNNNNNGG 3 cut(s) 372, 1463, 1637
Bse1I ACTGG 3 cut(s) 820, 1238, 1589
Bse3DI GCAATG 1 cut(s) 38
Bse8I GATNNNNATC 3 cut(s) 447, 513, 1757
BseAI TCCGGA 2 cut(s) 1270, 1654
BseBI CCWGG 2 cut(s) 522, 1340
BseDI CCNNGG 8 cut(s) 75, 81, 555, 879, 1004, 1005, 1338, 1732
BseGI GGATG 9 cut(s) 366, 400, 517, 724, 824, 1279, 1307, 1728, 1758
BseJI GATNNNNATC 3 cut(s) 447, 513, 1757
BseLI CCNNNNNNNGG 3 cut(s) 372, 1463, 1637
BseMI GCAATG 1 cut(s) 38
BseMII CTCAG 4 cut(s) 171, 1142, 1422, 1722
BseNI ACTGG 3 cut(s) 820, 1238, 1589
BseRI GAGGAG 2 cut(s) 599, 1405
BseSI GKGCMC 3 cut(s) 380, 1251, 1718
BseXI GCAGC 9 cut(s) 83, 538, 553, 560, 640, 721, 724, 1084, 1711
BseYI CCCAGC 1 cut(s) 459
Bsh1236I CGCG 1 cut(s) 180
Bsh1285I CGRYCG 1 cut(s) 1411
BshFI GGCC 7 cut(s) 80, 204, 365, 938, 1467, 1630, 1740
BshNI GGYRCC 1 cut(s) 1364
BsiEI CGRYCG 1 cut(s) 1411
BsiHKAI GWGCWC 2 cut(s) 1251, 1718
BsiHKCI CYCGRG 2 cut(s) 187, 1004
BsiSI CCGG 4 cut(s) 1005, 1121, 1271, 1655
BslFI GGGAC 4 cut(s) 204, 438, 857, 1440
BslI CCNNNNNNNGG 3 cut(s) 372, 1463, 1637
BsmAI GTCTC 4 cut(s) 971, 1313, 1421, 1646
BsmFI GGGAC 4 cut(s) 204, 438, 857, 1440
BsnI GGCC 7 cut(s) 80, 204, 365, 938, 1467, 1630, 1740
Bso31I GGTCTC 1 cut(s) 1646
BsoBI CYCGRG 2 cut(s) 187, 1004
Bsp1286I GDGCHC 3 cut(s) 380, 1251, 1718
Bsp13I TCCGGA 2 cut(s) 1270, 1654
Bsp143I GATC 2 cut(s) 250, 448
Bsp19I CCATGG 1 cut(s) 75
BspACI CCGC 3 cut(s) 180, 644, 1411
BspANI GGCC 7 cut(s) 80, 204, 365, 938, 1467, 1630, 1740
BspCNI CTCAG 4 cut(s) 170, 1143, 1423, 1721
BspEI TCCGGA 2 cut(s) 1270, 1654
BspFNI CGCG 1 cut(s) 180
BspHI TCATGA 1 cut(s) 390
BspLI GGNNCC 2 cut(s) 1366, 1456
BspMAI CTGCAG 2 cut(s) 550, 1290
BspMI ACCTGC 1 cut(s) 1629
BspPI GGATC 2 cut(s) 258, 456
BspQI GCTCTTC 1 cut(s) 638
BspT107I GGYRCC 1 cut(s) 1364
BspTNI GGTCTC 1 cut(s) 1646
BsrBI CCGCTC 1 cut(s) 1413
BsrDI GCAATG 1 cut(s) 38
BsrI ACTGG 3 cut(s) 820, 1238, 1589
BssECI CCNNGG 8 cut(s) 75, 81, 555, 879, 1004, 1005, 1338, 1732
BssMI GATC 2 cut(s) 250, 448
BssNI GRCGYC 1 cut(s) 1365
BssT1I CCWWGG 4 cut(s) 75, 555, 879, 1732
Bst2UI CCWGG 2 cut(s) 522, 1340
Bst4CI ACNGT 2 cut(s) 24, 286
Bst6I CTCTTC 4 cut(s) 638, 759, 1419, 1475
BstACI GRCGYC 1 cut(s) 1365
BstAPI GCANNNNNTGC 1 cut(s) 566
BstBAI YACGTR 1 cut(s) 1021
BstC8I GCNNGC 3 cut(s) 14, 958, 1704
BstDEI CTNAG 7 cut(s) 157, 687, 1151, 1431, 1476, 1708, 1763
BstDSI CCRYGG 2 cut(s) 75, 81
BstF5I GGATG 9 cut(s) 366, 400, 517, 724, 824, 1279, 1307, 1728, 1758
BstFNI CGCG 1 cut(s) 180
BstH2I RGCGCY 1 cut(s) 1368
BstHHI GCGC 3 cut(s) 180, 962, 1367
BstKTI GATC 2 cut(s) 253, 451
BstMAI GTCTC 4 cut(s) 971, 1313, 1421, 1646
BstMBI GATC 2 cut(s) 250, 448
BstMCI CGRYCG 1 cut(s) 1411
BstMWI GCNNNNNNNGC 5 cut(s) 77, 557, 566, 572, 1103
BstNI CCWGG 2 cut(s) 522, 1340
BstSCI CCNGG 5 cut(s) 520, 1003, 1004, 1119, 1338
BstSFI CTRYAG 2 cut(s) 546, 1286
BstSLI GKGCMC 3 cut(s) 380, 1251, 1718
BstUI CGCG 1 cut(s) 180
BstV1I GCAGC 9 cut(s) 83, 538, 553, 560, 640, 721, 724, 1084, 1711
BstV2I GAAGAC 1 cut(s) 480
BsuRI GGCC 7 cut(s) 80, 204, 365, 938, 1467, 1630, 1740
BtgI CCRYGG 2 cut(s) 75, 81
BtgZI GCGATG 2 cut(s) 1316, 1563
BtsCI GGATG 9 cut(s) 366, 400, 517, 724, 824, 1279, 1307, 1728, 1758
BtsIMutI CAGTG 3 cut(s) 291, 378, 1771
BveI ACCTGC 1 cut(s) 1629
Cac8I GCNNGC 3 cut(s) 14, 958, 1704
CciI TCATGA 1 cut(s) 390
CfoI GCGC 3 cut(s) 180, 962, 1367
Cfr13I GGNCC 5 cut(s) 363, 1379, 1454, 1628, 1739
Cfr9I CCCGGG 1 cut(s) 1004
CseI GACGC 2 cut(s) 16, 455
Csp6I GTAC 3 cut(s) 499, 769, 1018
CviQI GTAC 3 cut(s) 499, 769, 1018
DdeI CTNAG 7 cut(s) 157, 687, 1151, 1431, 1476, 1708, 1763
DinI GGCGCC 1 cut(s) 1366
DpnI GATC 2 cut(s) 252, 450
DpnII GATC 2 cut(s) 250, 448
DraIII CACNNNGTG 1 cut(s) 1561
DrdI GACNNNNNNGTC 1 cut(s) 167
DseDI GACNNNNNNGTC 1 cut(s) 167
EaeI YGGCCR 1 cut(s) 78
Eam1104I CTCTTC 4 cut(s) 638, 759, 1419, 1475
EarI CTCTTC 4 cut(s) 638, 759, 1419, 1475
Eco130I CCWWGG 4 cut(s) 75, 555, 879, 1732
Eco31I GGTCTC 1 cut(s) 1646
Eco47I GGWCC 2 cut(s) 1379, 1454
Eco88I CYCGRG 2 cut(s) 187, 1004
EcoO109I RGGNCCY 2 cut(s) 1379, 1628
EcoRI GAATTC 1 cut(s) 833
EcoRII CCWGG 2 cut(s) 520, 1338
EcoT14I CCWWGG 4 cut(s) 75, 555, 879, 1732
EgeI GGCGCC 1 cut(s) 1366
EheI GGCGCC 1 cut(s) 1366
ErhI CCWWGG 4 cut(s) 75, 555, 879, 1732
FalI AAGNNNNNCTT 2 cut(s) 617, 649
FaqI GGGAC 4 cut(s) 204, 438, 857, 1440
FblI GTMKAC 1 cut(s) 993
Fnu4HI GCNGC 9 cut(s) 72, 549, 552, 567, 629, 735, 738, 1098, 1700
FokI GGATG 9 cut(s) 353, 387, 504, 731, 831, 1286, 1314, 1715, 1745
Fsp4HI GCNGC 9 cut(s) 72, 549, 552, 567, 629, 735, 738, 1098, 1700
FspBI CTAG 4 cut(s) 47, 65, 614, 1070
GlaI GCGC 3 cut(s) 179, 961, 1366
GluI GCNGC 9 cut(s) 72, 549, 552, 567, 629, 735, 738, 1098, 1700
GsaI CCCAGC 1 cut(s) 463
GsuI CTGGAG 1 cut(s) 558
HaeII RGCGCY 1 cut(s) 1368
HaeIII GGCC 7 cut(s) 80, 204, 365, 938, 1467, 1630, 1740
HapII CCGG 4 cut(s) 1005, 1121, 1271, 1655
HgaI GACGC 2 cut(s) 16, 455
HhaI GCGC 3 cut(s) 180, 962, 1367
Hin1I GRCGYC 1 cut(s) 1365
Hin6I GCGC 3 cut(s) 178, 960, 1365
HinP1I GCGC 3 cut(s) 178, 960, 1365
HindIII AAGCTT 1 cut(s) 14
HinfI GANTC 6 cut(s) 168, 185, 192, 443, 651, 671
HpaII CCGG 4 cut(s) 1005, 1121, 1271, 1655
HphI GGTGA 5 cut(s) 53, 82, 194, 229, 1573
Hpy166II GTNNAC 7 cut(s) 220, 790, 994, 1078, 1249, 1716, 1726
Hpy188III TCNNGA 9 cut(s) 107, 189, 319, 391, 470, 1142, 1271, 1382, 1655
Hpy8I GTNNAC 7 cut(s) 220, 790, 994, 1078, 1249, 1716, 1726
HpyAV CCTTC 4 cut(s) 316, 881, 974, 1118
HpyCH4III ACNGT 2 cut(s) 24, 286
HpyCH4IV ACGT 2 cut(s) 638, 1020
HpyF10VI GCNNNNNNNGC 5 cut(s) 77, 557, 566, 572, 1103
HpyF3I CTNAG 7 cut(s) 157, 687, 1151, 1431, 1476, 1708, 1763
HpySE526I ACGT 2 cut(s) 638, 1020
Hsp92I GRCGYC 1 cut(s) 1365
HspAI GCGC 3 cut(s) 178, 960, 1365
KasI GGCGCC 1 cut(s) 1364
Kpn2I TCCGGA 2 cut(s) 1270, 1654
Kzo9I GATC 2 cut(s) 250, 448
LguI GCTCTTC 1 cut(s) 638
LmnI GCTCC 3 cut(s) 305, 463, 1418
Lsp1109I GCAGC 9 cut(s) 83, 538, 553, 560, 640, 721, 724, 1084, 1711
LweI GCATC 3 cut(s) 232, 569, 1067
MaeI CTAG 4 cut(s) 47, 65, 614, 1070
MaeII ACGT 2 cut(s) 638, 1020
MaeIII GTNAC 5 cut(s) 182, 286, 1048, 1164, 1591
MalI GATC 2 cut(s) 252, 450
MbiI CCGCTC 1 cut(s) 1413
MboI GATC 2 cut(s) 250, 448
MboII GAAGA 9 cut(s) 50, 485, 625, 776, 1058, 1436, 1462, 1582, 1670
MhlI GDGCHC 3 cut(s) 380, 1251, 1718
MlsI TGGCCA 1 cut(s) 80
MluCI AATT 4 cut(s) 260, 833, 1131, 1499
MluNI TGGCCA 1 cut(s) 80
Mly113I GGCGCC 1 cut(s) 1365
MlyI GAGTC 4 cut(s) 177, 179, 186, 680
MmeI TCCRAC 5 cut(s) 31, 208, 870, 1279, 1673
Mox20I TGGCCA 1 cut(s) 80
MroI TCCGGA 2 cut(s) 1270, 1654
MscI TGGCCA 1 cut(s) 80
MseI TTAA 1 cut(s) 1602
MslI CAYNNNNRTG 1 cut(s) 1257
Msp20I TGGCCA 1 cut(s) 80
MspA1I CMGCKG 2 cut(s) 551, 566
MspI CCGG 4 cut(s) 1005, 1121, 1271, 1655
MspR9I CCNGG 5 cut(s) 522, 1005, 1006, 1121, 1340
MvaI CCWGG 2 cut(s) 522, 1340
MvnI CGCG 1 cut(s) 180
MwoI GCNNNNNNNGC 5 cut(s) 77, 557, 566, 572, 1103
NarI GGCGCC 1 cut(s) 1365
NciI CCSGG 3 cut(s) 1005, 1006, 1121
NcoI CCATGG 1 cut(s) 75
NdeII GATC 2 cut(s) 250, 448
NlaIV GGNNCC 2 cut(s) 1366, 1456
NmuCI GTSAC 4 cut(s) 182, 286, 1048, 1164
OliI CACNNNNGTG 1 cut(s) 1257
PagI TCATGA 1 cut(s) 390
PciSI GCTCTTC 1 cut(s) 638
PfeI GAWTC 2 cut(s) 443, 651
PflMI CCANNNNNTGG 1 cut(s) 372
PkrI GCNGC 9 cut(s) 73, 550, 553, 568, 630, 736, 739, 1099, 1701
PleI GAGTC 4 cut(s) 176, 179, 186, 679
PluTI GGCGCC 1 cut(s) 1368
PpsI GAGTC 4 cut(s) 176, 179, 186, 679
Ppu21I YACGTR 1 cut(s) 1021
PpuMI RGGWCCY 1 cut(s) 1379
Psp5II RGGWCCY 1 cut(s) 1379
Psp6I CCWGG 2 cut(s) 520, 1338
PspFI CCCAGC 1 cut(s) 459
PspGI CCWGG 2 cut(s) 520, 1338
PspN4I GGNNCC 2 cut(s) 1366, 1456
PspPI GGNCC 5 cut(s) 363, 1379, 1454, 1628, 1739
PspPPI RGGWCCY 1 cut(s) 1379
PsrI GAACNNNNNNTAC 2 cut(s) 752, 784
PstI CTGCAG 2 cut(s) 550, 1290
PvuII CAGCTG 2 cut(s) 551, 566
RsaI GTAC 3 cut(s) 500, 770, 1019
RsaNI GTAC 3 cut(s) 499, 769, 1018
RseI CAYNNNNRTG 1 cut(s) 1257
SapI GCTCTTC 1 cut(s) 638
SaqAI TTAA 1 cut(s) 1602
SatI GCNGC 9 cut(s) 72, 549, 552, 567, 629, 735, 738, 1098, 1700
Sau3AI GATC 2 cut(s) 250, 448
Sau96I GGNCC 5 cut(s) 363, 1379, 1454, 1628, 1739
ScaI AGTACT 1 cut(s) 770
SchI GAGTC 4 cut(s) 177, 179, 186, 680
ScrFI CCNGG 5 cut(s) 522, 1005, 1006, 1121, 1340
SduI GDGCHC 3 cut(s) 380, 1251, 1718
SfaNI GCATC 3 cut(s) 232, 569, 1067
SfcI CTRYAG 2 cut(s) 546, 1286
SfoI GGCGCC 1 cut(s) 1366
SinI GGWCC 2 cut(s) 1379, 1454
SmaI CCCGGG 1 cut(s) 1006
SmiMI CAYNNNNRTG 1 cut(s) 1257
SmlI CTYRAG 5 cut(s) 210, 776, 923, 1140, 1743
SmoI CTYRAG 5 cut(s) 210, 776, 923, 1140, 1743
SpeI ACTAGT 1 cut(s) 46
Sse9I AATT 4 cut(s) 260, 833, 1131, 1499
SsiI CCGC 3 cut(s) 180, 644, 1411
SspDI GGCGCC 1 cut(s) 1364
SspMI CTAG 4 cut(s) 47, 65, 614, 1070
StyD4I CCNGG 5 cut(s) 520, 1003, 1004, 1119, 1338
StyI CCWWGG 4 cut(s) 75, 555, 879, 1732
TaaI ACNGT 2 cut(s) 24, 286
TaiI ACGT 2 cut(s) 641, 1023
TaqI TCGA 1 cut(s) 129
TasI AATT 4 cut(s) 260, 833, 1131, 1499
TatI WGTACW 1 cut(s) 768
TfiI GAWTC 2 cut(s) 443, 651
Tru1I TTAA 1 cut(s) 1602
Tru9I TTAA 1 cut(s) 1602
TscAI CASTG 2 cut(s) 291, 385
TseFI GTSAC 4 cut(s) 182, 286, 1048, 1164
TseI GCWGC 9 cut(s) 71, 548, 551, 566, 628, 734, 737, 1097, 1699
Tsp45I GTSAC 4 cut(s) 182, 286, 1048, 1164
TspGWI ACGGA 2 cut(s) 98, 212
TspMI CCCGGG 1 cut(s) 1004
TspRI CASTG 2 cut(s) 291, 385
Van91I CCANNNNNTGG 1 cut(s) 372
VneI GTGCAC 2 cut(s) 1247, 1714
VpaK11BI GGWCC 2 cut(s) 1379, 1454
XapI RAATTY 4 cut(s) 260, 833, 1131, 1499
XcmI CCANNNNNNNNNTGG 1 cut(s) 886
XmaI CCCGGG 1 cut(s) 1004
XmiI GTMKAC 1 cut(s) 993
XspI CTAG 4 cut(s) 47, 65, 614, 1070
ZrmI AGTACT 1 cut(s) 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.