Rmu_sc0003311.1_g000002

Belongs to the glycosyl hydrolase 9 (cellulase E) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003311.1
OG0013278
Physical Location & Seq
Reverse (-)
8689 .. 11572
2884 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003311.1_g000002.1.cds

Sequence Viewer

Length: 1824 bp
atgctacttggtgtggaagcagccactgcttcagagtttagctatggcgaggctttagacaagagtttgctcttttttgaggcacaaagatctggtaaactgcccccaaaccagcgagtcaagtggcgcagtgactcaggacttaaggatggcctagctcaaggggtggacctggttggagggtattatgatgcaggggatcatgtgaaatttggactaccaatggcattcacagtgacaatgctttcatggggagctattgagttcaggaaggagatcacagatttagaccaattaggtcagacattatgggccattagatggggcactgactatttcatcaaagcacatccacagcctaatgttctttggggacaggtaggagatgggaactctgatcactattgttgggagcgcgcagaggacatgacaactccaagaaatgcttacaaaattgatgaaaatcatcccggttcagacattgctggtgaaactgcagctgccttggcctcagctgccatagctttcaagccttacaactcttcctactccaatctcctcttagttcatgcaaaacagcttttctcatttgcagatagattccgaggattatatgatgaatccattggggatgctaaggacttctacacctcatcgggttactccgacgagctactatgggctgcggcatggctctacgaagcaaccaacgatgactactacctcaagtatgttgtggacaacgccgtgtatatgggtggaactggatggtcagtcaaagagttttcttgggataacaaatatgctggtgtccaaatccttctcacaaaggttttgttagagggaagaggtggtgcatatacttccacactgaaacaatatcaggccaaagcagattactttgcatgtgcttgtctgcagaaaaatgatggctacaatgtccatacaactcctgggggcttattatacgtgcgtgaatggaacaacttgcagtatgttacttctgcttcgtttcttctagctgtttactccgattatctctctgctgcaaatgccaagctcaattgtccggaaggacaaattcaacctcaagaggtcctcaactttgcaaagtcacaggttgactacattcttggtaaaaaccccaagtcaatgagctacatagttgggtatggagccaagtatccagttcatgtgcaccacagagatgcttccattccttctatatcagttcttcatgctgtggttggatgtgtgcaaggatttgagaaatggtatcaccgcactgagggaaatcctaatgtcgtctatggggcacttgtgggaggtcctgaccagaatgacaacttctccgatgaccgctccaactatgaagggacagagcctacaatttctggcactggtcccctagtaggcctcttctctaagctacagagtttaaatggtggtttcaatagaggatcaccaaaatcccatacacccacaccaagtgcctatcaccctgaaacaacaggacccccaaaaaaatcagatactcctcctatcaaattccttcactctataactagcacatggactgttgcaaaaacaagttattatcgacacaaggtgatactaaagaacacatcccagaaaccgataacaaatgtgaagctggtgcttggaaacctccaagggccattatggggtctctctccaactccacagaagaacacatatgagcttcctcaatggcagaaagtactgcagcctggcgccgagtgcacttttgtttacgttcaaggtggccctcaggcaaagatatctattcaaagctacaattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00500 ko01100 map00500 map01100
Pfam Domains
Protein Families
CBM49 Glyco_hydro_9

Protein Analysis

607

Amino Acids

67.14

Weight (kDa)

6.32

Isoelectric Point (pI)

28.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013278)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48930
fragaria_vesca FvH4_5g29090
malus_domestica MD16G1001700.v1.1
prunus_persica Prupe.1G346900_v2.0.a1
pyrus_communis pycom16g00390
rosa_chinensis RchiOBHm_Chr7g0221721 RchiOBHm_Chr7g0221731
rosa_laevigata RLG00000002135
rosa_multiflora Rmu_co8400965.1_g000001 Rmu_sc0003311.1_g000002
rosa_roxburghii Rroxscaffold_3G00238090
rosa_rugosa Rorug07G0203000
rosa_samantha Rh7AG343900 Rh7BG334300 Rh7CG361300 Rh7DG341700
rosa_wichuraiana Rw0G003250 Rw7G029160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1754
AccB7I CCANNNNNTGG 1 cut(s) 321
AccBSI CCGCTC 1 cut(s) 1362
AccII CGCG 1 cut(s) 417
AccIII TCCGGA 1 cut(s) 1069
AciI CCGC 3 cut(s) 686, 1282, 1360
AclWI GGATC 2 cut(s) 207, 1468
AcsI RAATTY 3 cut(s) 209, 1080, 1547
AcuI CTGAAG 1 cut(s) 15
AcyI GRCGYC 1 cut(s) 1755
AdeI CACNNNGTG 2 cut(s) 1490, 1609
AfaI GTAC 1 cut(s) 1743
AfiI CCNNNNNNNGG 4 cut(s) 321, 1288, 1412, 1685
AflII CTTAAG 1 cut(s) 143
AgsI TTSAA 5 cut(s) 529, 1085, 1453, 1781, 1811
AjnI CCWGG 3 cut(s) 171, 952, 1750
Alw21I GWGCWC 2 cut(s) 1200, 1766
Alw26I GTCTC 1 cut(s) 1694
Alw44I GTGCAC 2 cut(s) 1196, 1762
AlwI GGATC 2 cut(s) 207, 1468
AlwNI CAGNNNCTG 1 cut(s) 26
Aor13HI TCCGGA 1 cut(s) 1069
AoxI GGCC 7 cut(s) 151, 312, 507, 885, 1414, 1676, 1786
ApaLI GTGCAC 2 cut(s) 1196, 1762
ApeKI GCWGC 7 cut(s) 20, 497, 500, 515, 683, 1046, 1747
ApoI RAATTY 3 cut(s) 209, 1080, 1547
AspLEI GCGC 4 cut(s) 129, 417, 419, 1757
AspS9I GGNCC 8 cut(s) 169, 312, 1096, 1328, 1403, 1514, 1676, 1787
AsuC2I CCSGG 1 cut(s) 471
AsuHPI GGTGA 5 cut(s) 500, 1271, 1455, 1490, 1621
AvaII GGWCC 5 cut(s) 169, 1096, 1328, 1403, 1514
AxyI CCTNAGG 1 cut(s) 1791
BaeGI GKGCMC 4 cut(s) 329, 1200, 1318, 1766
BanI GGYRCC 1 cut(s) 1754
Bbv12I GWGCWC 2 cut(s) 1200, 1766
BbvCI CCTCAGC 1 cut(s) 511
BbvI GCAGC 7 cut(s) 32, 487, 502, 509, 670, 1033, 1759
BccI CCATC 5 cut(s) 143, 315, 380, 762, 923
BceAI ACGGC 1 cut(s) 731
BciT130I CCWGG 3 cut(s) 173, 954, 1752
BciVI GTATCC 1 cut(s) 1194
BclI TGATCA 1 cut(s) 397
BcnI CCSGG 1 cut(s) 471
BcoDI GTCTC 1 cut(s) 1694
BfaI CTAG 4 cut(s) 155, 1019, 1409, 1566
BfmI CTRYAG 4 cut(s) 495, 917, 1430, 1745
BfoI RGCGCY 1 cut(s) 1758
BfrI CTTAAG 1 cut(s) 143
BfuI GTATCC 1 cut(s) 1194
BglII AGATCT 1 cut(s) 89
BisI GCNGC 8 cut(s) 21, 498, 501, 516, 684, 687, 1047, 1748
BlsI GCNGC 8 cut(s) 22, 499, 502, 517, 685, 688, 1048, 1749
BmcAI AGTACT 1 cut(s) 1743
Bme1390I CCNGG 4 cut(s) 173, 471, 954, 1752
Bme18I GGWCC 5 cut(s) 169, 1096, 1328, 1403, 1514
BmgT120I GGNCC 8 cut(s) 169, 312, 1096, 1328, 1403, 1514, 1676, 1787
BmiI GGNNCC 4 cut(s) 1177, 1405, 1516, 1756
BmrFI CCNGG 4 cut(s) 173, 471, 954, 1752
BmsI GCATC 3 cut(s) 181, 622, 1198
Bpu10I CCTNAGC 2 cut(s) 511, 636
BpuEI CTTGAG 3 cut(s) 144, 710, 1074
BpuMI CCSGG 1 cut(s) 471
BsaAI YACGTR 1 cut(s) 970
BsaBI GATNNNNATC 1 cut(s) 462
BsaHI GRCGYC 1 cut(s) 1755
BsaI GGTCTC 1 cut(s) 1694
BsaJI CCNNGG 4 cut(s) 504, 604, 953, 1672
BsaWI WCCGGW 1 cut(s) 1069
BsaXI ACNNNNNCTCC 2 cut(s) 1334, 1364
Bsc4I CCNNNNNNNGG 4 cut(s) 321, 1288, 1412, 1685
Bse1I ACTGG 3 cut(s) 769, 1187, 1405
Bse21I CCTNAGG 1 cut(s) 1791
Bse3DI GCAATG 1 cut(s) 480
Bse8I GATNNNNATC 1 cut(s) 462
BseAI TCCGGA 1 cut(s) 1069
BseBI CCWGG 3 cut(s) 173, 954, 1752
BseDI CCNNGG 4 cut(s) 504, 604, 953, 1672
BseGI GGATG 7 cut(s) 154, 349, 466, 637, 773, 1256, 1625
BseJI GATNNNNATC 1 cut(s) 462
BseLI CCNNNNNNNGG 4 cut(s) 321, 1288, 1412, 1685
BseMI GCAATG 1 cut(s) 480
BseMII CTCAG 4 cut(s) 150, 525, 1278, 1805
BseNI ACTGG 3 cut(s) 769, 1187, 1405
BsePI GCGCGC 1 cut(s) 415
BseRI GAGGAG 2 cut(s) 548, 1527
BseSI GKGCMC 4 cut(s) 329, 1200, 1318, 1766
BseXI GCAGC 7 cut(s) 32, 487, 502, 509, 670, 1033, 1759
Bsh1236I CGCG 1 cut(s) 417
BshFI GGCC 7 cut(s) 153, 314, 509, 887, 1416, 1678, 1788
BshNI GGYRCC 1 cut(s) 1754
BsiHKAI GWGCWC 2 cut(s) 1200, 1766
BsiSI CCGG 2 cut(s) 471, 1070
BslFI GGGAC 3 cut(s) 387, 1389, 1390
BslI CCNNNNNNNGG 4 cut(s) 321, 1288, 1412, 1685
BsmAI GTCTC 1 cut(s) 1694
BsmFI GGGAC 3 cut(s) 387, 1389, 1390
BsmI GAATGC 1 cut(s) 227
BsnI GGCC 7 cut(s) 153, 314, 509, 887, 1416, 1678, 1788
Bso31I GGTCTC 1 cut(s) 1694
Bsp1286I GDGCHC 4 cut(s) 329, 1200, 1318, 1766
Bsp13I TCCGGA 1 cut(s) 1069
Bsp143I GATC 5 cut(s) 89, 199, 276, 397, 1460
BspACI CCGC 3 cut(s) 686, 1282, 1360
BspANI GGCC 7 cut(s) 153, 314, 509, 887, 1416, 1678, 1788
BspCNI CTCAG 4 cut(s) 149, 524, 1279, 1804
BspEI TCCGGA 1 cut(s) 1069
BspFNI CGCG 1 cut(s) 417
BspLI GGNNCC 4 cut(s) 1177, 1405, 1516, 1756
BspMAI CTGCAG 3 cut(s) 499, 921, 1749
BspPI GGATC 2 cut(s) 207, 1468
BspT107I GGYRCC 1 cut(s) 1754
BspTI CTTAAG 1 cut(s) 143
BspTNI GGTCTC 1 cut(s) 1694
BsrBI CCGCTC 1 cut(s) 1362
BsrDI GCAATG 1 cut(s) 480
BsrI ACTGG 3 cut(s) 769, 1187, 1405
BssECI CCNNGG 4 cut(s) 504, 604, 953, 1672
BssHII GCGCGC 1 cut(s) 415
BssMI GATC 5 cut(s) 89, 199, 276, 397, 1460
BssNI GRCGYC 1 cut(s) 1755
BssT1I CCWWGG 2 cut(s) 504, 1672
Bst2UI CCWGG 3 cut(s) 173, 954, 1752
Bst4CI ACNGT 2 cut(s) 235, 1579
Bst6I CTCTTC 3 cut(s) 547, 841, 1424
BstACI GRCGYC 1 cut(s) 1755
BstAFI CTTAAG 1 cut(s) 143
BstAPI GCANNNNNTGC 1 cut(s) 26
BstBAI YACGTR 1 cut(s) 970
BstC8I GCNNGC 1 cut(s) 417
BstDEI CTNAG 7 cut(s) 136, 511, 562, 636, 1287, 1425, 1791
BstF5I GGATG 7 cut(s) 154, 349, 466, 637, 773, 1256, 1625
BstFNI CGCG 1 cut(s) 417
BstH2I RGCGCY 1 cut(s) 1758
BstHHI GCGC 4 cut(s) 129, 417, 419, 1757
BstKTI GATC 5 cut(s) 92, 202, 279, 400, 1463
BstMAI GTCTC 1 cut(s) 1694
BstMBI GATC 5 cut(s) 89, 199, 276, 397, 1460
BstMWI GCNNNNNNNGC 6 cut(s) 26, 506, 515, 521, 1052, 1761
BstNI CCWGG 3 cut(s) 173, 954, 1752
BstNSI RCATGY 1 cut(s) 909
BstSCI CCNGG 4 cut(s) 171, 469, 952, 1750
BstSFI CTRYAG 4 cut(s) 495, 917, 1430, 1745
BstSLI GKGCMC 4 cut(s) 329, 1200, 1318, 1766
BstUI CGCG 1 cut(s) 417
BstV1I GCAGC 7 cut(s) 32, 487, 502, 509, 670, 1033, 1759
BstX2I RGATCY 1 cut(s) 89
BstYI RGATCY 1 cut(s) 89
Bsu36I CCTNAGG 1 cut(s) 1791
BsuI GTATCC 1 cut(s) 1194
BsuRI GGCC 7 cut(s) 153, 314, 509, 887, 1416, 1678, 1788
BtsCI GGATG 7 cut(s) 154, 349, 466, 637, 773, 1256, 1625
BtsI GCAGTG 2 cut(s) 24, 136
BtsIMutI CAGTG 7 cut(s) 24, 136, 240, 327, 869, 1284, 1398
Cac8I GCNNGC 1 cut(s) 417
CaiI CAGNNNCTG 1 cut(s) 26
CfoI GCGC 4 cut(s) 129, 417, 419, 1757
Cfr13I GGNCC 8 cut(s) 169, 312, 1096, 1328, 1403, 1514, 1676, 1787
CsiI ACCWGGT 1 cut(s) 171
Csp6I GTAC 1 cut(s) 1742
CviAII CATG 9 cut(s) 203, 249, 427, 569, 690, 906, 1193, 1238, 1572
CviQI GTAC 1 cut(s) 1742
DdeI CTNAG 7 cut(s) 136, 511, 562, 636, 1287, 1425, 1791
DinI GGCGCC 1 cut(s) 1756
DpnI GATC 5 cut(s) 91, 201, 278, 399, 1462
DpnII GATC 5 cut(s) 89, 199, 276, 397, 1460
DraI TTTAAA 1 cut(s) 1440
DraIII CACNNNGTG 2 cut(s) 1490, 1609
Eam1104I CTCTTC 3 cut(s) 547, 841, 1424
EarI CTCTTC 3 cut(s) 547, 841, 1424
Eco130I CCWWGG 2 cut(s) 504, 1672
Eco147I AGGCCT 1 cut(s) 1416
Eco31I GGTCTC 1 cut(s) 1694
Eco32I GATATC 1 cut(s) 1803
Eco47I GGWCC 5 cut(s) 169, 1096, 1328, 1403, 1514
Eco57I CTGAAG 1 cut(s) 15
Eco81I CCTNAGG 1 cut(s) 1791
EcoO109I RGGNCCY 3 cut(s) 1096, 1328, 1514
EcoRII CCWGG 3 cut(s) 171, 952, 1750
EcoRV GATATC 1 cut(s) 1803
EcoT14I CCWWGG 2 cut(s) 504, 1672
EgeI GGCGCC 1 cut(s) 1756
EheI GGCGCC 1 cut(s) 1756
ErhI CCWWGG 2 cut(s) 504, 1672
FaeI CATG 9 cut(s) 206, 252, 430, 572, 693, 909, 1196, 1241, 1575
FalI AAGNNNNNCTT 2 cut(s) 430, 462
FaqI GGGAC 3 cut(s) 387, 1389, 1390
FatI CATG 9 cut(s) 202, 248, 426, 568, 689, 905, 1192, 1237, 1571
FauNDI CATATG 1 cut(s) 1717
FbaI TGATCA 1 cut(s) 397
Fnu4HI GCNGC 8 cut(s) 21, 498, 501, 516, 684, 687, 1047, 1748
FokI GGATG 7 cut(s) 161, 336, 453, 644, 780, 1263, 1612
Fsp4HI GCNGC 8 cut(s) 21, 498, 501, 516, 684, 687, 1047, 1748
FspBI CTAG 4 cut(s) 155, 1019, 1409, 1566
GlaI GCGC 4 cut(s) 128, 416, 418, 1756
GluI GCNGC 8 cut(s) 21, 498, 501, 516, 684, 687, 1047, 1748
HaeII RGCGCY 1 cut(s) 1758
HaeIII GGCC 7 cut(s) 153, 314, 509, 887, 1416, 1678, 1788
HapII CCGG 2 cut(s) 471, 1070
HhaI GCGC 4 cut(s) 129, 417, 419, 1757
Hin1I GRCGYC 1 cut(s) 1755
Hin1II CATG 9 cut(s) 206, 252, 430, 572, 693, 909, 1196, 1241, 1575
Hin6I GCGC 4 cut(s) 127, 415, 417, 1755
HinP1I GCGC 4 cut(s) 127, 415, 417, 1755
HincII GTYRAC 1 cut(s) 1123
HindII GTYRAC 1 cut(s) 1123
HinfI GANTC 4 cut(s) 117, 134, 600, 620
HpaII CCGG 2 cut(s) 471, 1070
HphI GGTGA 5 cut(s) 500, 1271, 1455, 1490, 1621
Hpy166II GTNNAC 8 cut(s) 98, 169, 739, 1027, 1123, 1198, 1764, 1774
Hpy188I TCNGA 9 cut(s) 34, 303, 397, 478, 605, 667, 1033, 1354, 1531
Hpy188III TCNNGA 5 cut(s) 138, 268, 1070, 1091, 1331
Hpy8I GTNNAC 8 cut(s) 98, 169, 739, 1027, 1123, 1198, 1764, 1774
Hpy99I CGWCG 1 cut(s) 671
HpyAV CCTTC 6 cut(s) 265, 830, 1067, 1230, 1367, 1562
HpyCH4III ACNGT 2 cut(s) 235, 1579
HpyCH4IV ACGT 2 cut(s) 969, 1776
HpyF10VI GCNNNNNNNGC 6 cut(s) 26, 506, 515, 521, 1052, 1761
HpyF3I CTNAG 7 cut(s) 136, 511, 562, 636, 1287, 1425, 1791
HpySE526I ACGT 2 cut(s) 969, 1776
Hsp92I GRCGYC 1 cut(s) 1755
Hsp92II CATG 9 cut(s) 206, 252, 430, 572, 693, 909, 1196, 1241, 1575
HspAI GCGC 4 cut(s) 127, 415, 417, 1755
KasI GGCGCC 1 cut(s) 1754
Kpn2I TCCGGA 1 cut(s) 1069
Ksp22I TGATCA 1 cut(s) 397
Kzo9I GATC 5 cut(s) 89, 199, 276, 397, 1460
LmnI GCTCC 4 cut(s) 254, 412, 1175, 1367
Lsp1109I GCAGC 7 cut(s) 32, 487, 502, 509, 670, 1033, 1759
LweI GCATC 3 cut(s) 181, 622, 1198
MabI ACCWGGT 1 cut(s) 171
MaeI CTAG 4 cut(s) 155, 1019, 1409, 1566
MaeII ACGT 2 cut(s) 969, 1776
MaeIII GTNAC 5 cut(s) 131, 235, 659, 997, 1113
MalI GATC 5 cut(s) 91, 201, 278, 399, 1462
MbiI CCGCTC 1 cut(s) 1362
MboI GATC 5 cut(s) 89, 199, 276, 397, 1460
MboII GAAGA 6 cut(s) 534, 858, 1007, 1226, 1411, 1720
MfeI CAATTG 2 cut(s) 1063, 1819
MflI RGATCY 1 cut(s) 89
MhlI GDGCHC 4 cut(s) 329, 1200, 1318, 1766
MluCI AATT 8 cut(s) 209, 293, 453, 1063, 1080, 1389, 1547, 1819
Mly113I GGCGCC 1 cut(s) 1755
MlyI GAGTC 2 cut(s) 126, 128
MmeI TCCRAC 5 cut(s) 157, 690, 1228, 1389, 1721
MroI TCCGGA 1 cut(s) 1069
MseI TTAA 2 cut(s) 144, 1439
MslI CAYNNNNRTG 1 cut(s) 1206
MspA1I CMGCKG 2 cut(s) 500, 515
MspCI CTTAAG 1 cut(s) 143
MspI CCGG 2 cut(s) 471, 1070
MspR9I CCNGG 4 cut(s) 173, 471, 954, 1752
MunI CAATTG 2 cut(s) 1063, 1819
Mva1269I GAATGC 1 cut(s) 227
MvaI CCWGG 3 cut(s) 173, 954, 1752
MvnI CGCG 1 cut(s) 417
MwoI GCNNNNNNNGC 6 cut(s) 26, 506, 515, 521, 1052, 1761
NarI GGCGCC 1 cut(s) 1755
NciI CCSGG 1 cut(s) 471
NdeI CATATG 1 cut(s) 1717
NdeII GATC 5 cut(s) 89, 199, 276, 397, 1460
NlaIII CATG 9 cut(s) 206, 252, 430, 572, 693, 909, 1196, 1241, 1575
NlaIV GGNNCC 4 cut(s) 1177, 1405, 1516, 1756
NmeAIII GCCGAG 1 cut(s) 1783
NmuCI GTSAC 3 cut(s) 131, 235, 1113
NspI RCATGY 1 cut(s) 909
PauI GCGCGC 1 cut(s) 415
PceI AGGCCT 1 cut(s) 1416
PctI GAATGC 1 cut(s) 227
PfeI GAWTC 2 cut(s) 600, 620
PflMI CCANNNNNTGG 1 cut(s) 321
PkrI GCNGC 8 cut(s) 22, 499, 502, 517, 685, 688, 1048, 1749
PleI GAGTC 2 cut(s) 125, 128
PluTI GGCGCC 1 cut(s) 1758
PpsI GAGTC 2 cut(s) 125, 128
Ppu21I YACGTR 1 cut(s) 970
PpuMI RGGWCCY 3 cut(s) 1096, 1328, 1514
Psp5II RGGWCCY 3 cut(s) 1096, 1328, 1514
Psp6I CCWGG 3 cut(s) 171, 952, 1750
PspGI CCWGG 3 cut(s) 171, 952, 1750
PspN4I GGNNCC 4 cut(s) 1177, 1405, 1516, 1756
PspPI GGNCC 8 cut(s) 169, 312, 1096, 1328, 1403, 1514, 1676, 1787
PspPPI RGGWCCY 3 cut(s) 1096, 1328, 1514
PstI CTGCAG 3 cut(s) 499, 921, 1749
PstNI CAGNNNCTG 1 cut(s) 26
PsuI RGATCY 1 cut(s) 89
PteI GCGCGC 1 cut(s) 415
PvuII CAGCTG 2 cut(s) 500, 515
RsaI GTAC 1 cut(s) 1743
RsaNI GTAC 1 cut(s) 1742
RseI CAYNNNNRTG 1 cut(s) 1206
SaqAI TTAA 2 cut(s) 144, 1439
SatI GCNGC 8 cut(s) 21, 498, 501, 516, 684, 687, 1047, 1748
Sau3AI GATC 5 cut(s) 89, 199, 276, 397, 1460
Sau96I GGNCC 8 cut(s) 169, 312, 1096, 1328, 1403, 1514, 1676, 1787
ScaI AGTACT 1 cut(s) 1743
SchI GAGTC 2 cut(s) 126, 128
ScrFI CCNGG 4 cut(s) 173, 471, 954, 1752
SduI GDGCHC 4 cut(s) 329, 1200, 1318, 1766
SexAI ACCWGGT 1 cut(s) 171
SfaNI GCATC 3 cut(s) 181, 622, 1198
SfcI CTRYAG 4 cut(s) 495, 917, 1430, 1745
SfoI GGCGCC 1 cut(s) 1756
SinI GGWCC 5 cut(s) 169, 1096, 1328, 1403, 1514
SmiMI CAYNNNNRTG 1 cut(s) 1206
SmlI CTYRAG 4 cut(s) 143, 159, 725, 1089
SmoI CTYRAG 4 cut(s) 143, 159, 725, 1089
Sse9I AATT 8 cut(s) 209, 293, 453, 1063, 1080, 1389, 1547, 1819
SseBI AGGCCT 1 cut(s) 1416
SsiI CCGC 3 cut(s) 686, 1282, 1360
SspDI GGCGCC 1 cut(s) 1754
SspMI CTAG 4 cut(s) 155, 1019, 1409, 1566
StuI AGGCCT 1 cut(s) 1416
StyD4I CCNGG 4 cut(s) 171, 469, 952, 1750
StyI CCWWGG 2 cut(s) 504, 1672
TaaI ACNGT 2 cut(s) 235, 1579
TaiI ACGT 2 cut(s) 972, 1779
TaqI TCGA 1 cut(s) 1600
TasI AATT 8 cut(s) 209, 293, 453, 1063, 1080, 1389, 1547, 1819
TatI WGTACW 1 cut(s) 1741
TauI GCSGC 1 cut(s) 689
TfiI GAWTC 2 cut(s) 600, 620
Tru1I TTAA 2 cut(s) 144, 1439
Tru9I TTAA 2 cut(s) 144, 1439
TscAI CASTG 7 cut(s) 31, 136, 240, 334, 876, 1291, 1405
TseFI GTSAC 3 cut(s) 131, 235, 1113
TseI GCWGC 7 cut(s) 20, 497, 500, 515, 683, 1046, 1747
Tsp45I GTSAC 3 cut(s) 131, 235, 1113
TspDTI ATGAA 8 cut(s) 237, 328, 474, 557, 633, 1181, 1226, 1386
TspRI CASTG 7 cut(s) 31, 136, 240, 334, 876, 1291, 1405
Van91I CCANNNNNTGG 1 cut(s) 321
Vha464I CTTAAG 1 cut(s) 143
VneI GTGCAC 2 cut(s) 1196, 1762
VpaK11BI GGWCC 5 cut(s) 169, 1096, 1328, 1403, 1514
XapI RAATTY 3 cut(s) 209, 1080, 1547
XceI RCATGY 1 cut(s) 909
XcmI CCANNNNNNNNNTGG 1 cut(s) 950
XspI CTAG 4 cut(s) 155, 1019, 1409, 1566
ZrmI AGTACT 1 cut(s) 1743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.