Rh7BG334300

Belongs to the glycosyl hydrolase 9 (cellulase E) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0013278
Physical Location & Seq
Forward (+)
34708724 .. 34711656
2933 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG334300.1

Sequence Viewer

Length: 1665 bp
ATGATGTTCATGAGGAGCTACACCAAAATTGCACTAGTCTCCCTAGCTTTGCTAATGCTACTTGGTGTGCAAGCAGCCACTGCTTCAGAGTTTAACTACGGCGAGGCTTTAGACAAGAGTTTGCTCTTTTTCGAGGCACAAAGATCTGGTAAACTGCCCCCAAACCAGCGAGTCAAGTGGCGCAGTGACTCAGGACTTAAGGATGGCCTAGCTCAAGGGGTAGGAGATGGGAACTCTGATCACTATTGTTGGGAGCGCGCAGAGGACATGACAACTCCAAGAAATGCTTACAAAATTGATGAAAATCATCCCGGTTCAGACATTGCTGGTGAAACTGCAGCTGCCTTGGCCTCAGCTGCCATAGCTTTCAAGCCTTACAACTCTTCCTACTCCAATCTCCTCTTAGTTCATGCAAAACAGCTTTTCTCATTTGCAGATAGATTCCGAGGATTATATGATGAATCCATTGAAGATGCTAAGGACTTCTACACCTCATCGGGTTACTCCGACGAGCTACTATGGGCTGCGGCATGGCTCTACGAAGCAACCAACGATGACTACTACCTCAAGTATGTGGTGGACAACGCCGTGTATATGGGTGGAACTGGATGGTCAGTCAAAGAGTTTTCTTGGGATAACAAATATGCTGGTGTCCAAATCCTTCTCACAAAGGTTTTGTTAGAGGGAAGAGGTGGTGCATATACTTCCACACTGAAACAATATCAGGCCAAAGCAGATTACTTTGCCTGTGCTTGTCTGCAGAAAAATGATGGCTACAATGTCCACACAACTCCTGGGGGCTTGTTATACGTGCGTGAATGGAACAACTTGCAGTATGTTACTTCTGCTTCGTTTCTTCTAGCTGTTTACTCCGATTATCTCTCTGCTGCAAATGCCAAGCTCAATTGTCCGGAAGGACAAATTCAACCTCAAGAGGTCCTCAACTTTGCAAAGTCTCAGGTTGACTACATTCTTGGTAAAAACCCCAAGTCAATGAGCTACATAGTTGGGTATGGAGCAAAGTATCCAGTTCATGTACACCACAGAGATGCTTCCATTCCTTCTATATCAGTTCTTCATGCTGTGGTTGGATGTGTGCAAGGATTTGAGATATGGTATCACCGCACTGAGGGAAATCCTAATGTCGTCTATGGGGCACTTGTGGGAGGTCCTGACCAGAATGACAACTTCTCCGATGACCGATCCAACTATGAAGGGACAGAGCCTACAATTTCTGGCACTGGTCCCCTAGTAGGCCTCTTCTCTAAGCTACAGAGTTTAAATGGTGGTTTCAATAGAGGATCACCAAAATCCCATACACCCACACCAAGTGCCTATCACCCTGAAACAACAGCACCCCCAAAAAAATCAGATACTCCTCCTATCAAATTCCTTCACTCTATAACTAGCACATGGACTGTTGCAAAAACAAGTTATTATCGACACAAGGTGATACTAAAGAACACATCCCAGAAACCGATAACAAATGTGAAGCTGGTGCTTGGAAACCTCGAAGGGCCGTTATGGGGTCTCTCTCCAACTCCACAGAAGAACACATATGAGCTTCCTCAATGGCAGAAAGTCCTGCAGCCTGGCGCCGAGTGCACTTTTGTTTACGTTCAAGGTGGCCCTCAGGCAAAGATATCTATTCAAAGCTACAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00500 ko01100 map00500 map01100
Pfam Domains
Protein Families
CBM49 Glyco_hydro_9

Protein Analysis

554

Amino Acids

61.24

Weight (kDa)

6.68

Isoelectric Point (pI)

29.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_9 PF00759 33 - 70 6.9e-11 Glycosyl hydrolase family 9
Glyco_hydro_9 PF00759 73 - 420 1.5e-113 Glycosyl hydrolase family 9
CBM49 PF09478 462 - 541 1e-22 Carbohydrate binding domain CBM49
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013278)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48930
fragaria_vesca FvH4_5g29090
malus_domestica MD16G1001700.v1.1
prunus_persica Prupe.1G346900_v2.0.a1
pyrus_communis pycom16g00390
rosa_chinensis RchiOBHm_Chr7g0221721 RchiOBHm_Chr7g0221731
rosa_laevigata RLG00000002135
rosa_multiflora Rmu_co8400965.1_g000001 Rmu_sc0003311.1_g000002
rosa_roxburghii Rroxscaffold_3G00238090
rosa_rugosa Rorug07G0203000
rosa_samantha Rh7AG343900 Rh7BG334300 Rh7CG361300 Rh7DG341700
rosa_wichuraiana Rw0G003250 Rw7G029160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1595
AccII CGCG 1 cut(s) 258
AccIII TCCGGA 1 cut(s) 910
AciI CCGC 2 cut(s) 527, 1123
AclWI GGATC 2 cut(s) 1197, 1309
AcsI RAATTY 2 cut(s) 921, 1388
AcuI CTGAAG 1 cut(s) 69
AcyI GRCGYC 1 cut(s) 1596
AdeI CACNNNGTG 2 cut(s) 1331, 1450
AfaI GTAC 1 cut(s) 1038
AfiI CCNNNNNNNGG 3 cut(s) 1129, 1253, 1526
AflII CTTAAG 1 cut(s) 197
AgsI TTSAA 6 cut(s) 370, 470, 926, 1294, 1622, 1652
AhlI ACTAGT 1 cut(s) 34
AjnI CCWGG 2 cut(s) 793, 1591
Alw21I GWGCWC 1 cut(s) 1607
Alw26I GTCTC 3 cut(s) 43, 960, 1535
Alw44I GTGCAC 1 cut(s) 1603
AlwI GGATC 2 cut(s) 1197, 1309
AlwNI CAGNNNCTG 1 cut(s) 80
Aor13HI TCCGGA 1 cut(s) 910
AoxI GGCC 6 cut(s) 205, 348, 726, 1255, 1517, 1627
ApaLI GTGCAC 1 cut(s) 1603
ApeKI GCWGC 7 cut(s) 74, 338, 341, 356, 524, 887, 1588
ApoI RAATTY 2 cut(s) 921, 1388
AspLEI GCGC 4 cut(s) 183, 258, 260, 1598
AspS9I GGNCC 5 cut(s) 937, 1169, 1244, 1517, 1628
AsuC2I CCSGG 1 cut(s) 312
AsuHPI GGTGA 5 cut(s) 341, 1112, 1296, 1331, 1462
AvaII GGWCC 3 cut(s) 937, 1169, 1244
AxyI CCTNAGG 1 cut(s) 1632
BaeGI GKGCMC 2 cut(s) 1159, 1607
BanI GGYRCC 1 cut(s) 1595
Bbv12I GWGCWC 1 cut(s) 1607
BbvCI CCTCAGC 1 cut(s) 352
BbvI GCAGC 7 cut(s) 86, 328, 343, 350, 511, 874, 1600
BccI CCATC 4 cut(s) 197, 221, 603, 764
BceAI ACGGC 3 cut(s) 115, 572, 1504
BciT130I CCWGG 2 cut(s) 795, 1593
BciVI GTATCC 1 cut(s) 1035
BclI TGATCA 1 cut(s) 238
BcnI CCSGG 1 cut(s) 312
BcoDI GTCTC 3 cut(s) 43, 960, 1535
BcuI ACTAGT 1 cut(s) 34
BfaI CTAG 6 cut(s) 35, 44, 209, 860, 1250, 1407
BfmI CTRYAG 4 cut(s) 336, 758, 1271, 1586
BfoI RGCGCY 1 cut(s) 1599
BfrI CTTAAG 1 cut(s) 197
BfuI GTATCC 1 cut(s) 1035
BglII AGATCT 1 cut(s) 143
BisI GCNGC 8 cut(s) 75, 339, 342, 357, 525, 528, 888, 1589
BlsI GCNGC 8 cut(s) 76, 340, 343, 358, 526, 529, 889, 1590
Bme1390I CCNGG 3 cut(s) 312, 795, 1593
Bme18I GGWCC 3 cut(s) 937, 1169, 1244
BmgT120I GGNCC 5 cut(s) 937, 1169, 1244, 1517, 1628
BmiI GGNNCC 2 cut(s) 1246, 1597
BmrFI CCNGG 3 cut(s) 312, 795, 1593
BmsI GCATC 2 cut(s) 463, 1039
Bpu10I CCTNAGC 2 cut(s) 352, 477
BpuEI CTTGAG 3 cut(s) 198, 551, 915
BpuMI CCSGG 1 cut(s) 312
BsaAI YACGTR 1 cut(s) 811
BsaBI GATNNNNATC 1 cut(s) 303
BsaHI GRCGYC 1 cut(s) 1596
BsaI GGTCTC 1 cut(s) 1535
BsaJI CCNNGG 3 cut(s) 345, 445, 794
BsaWI WCCGGW 1 cut(s) 910
BsaXI ACNNNNNCTCC 2 cut(s) 1175, 1205
Bsc4I CCNNNNNNNGG 3 cut(s) 1129, 1253, 1526
Bse1I ACTGG 3 cut(s) 610, 1028, 1246
Bse21I CCTNAGG 1 cut(s) 1632
Bse3DI GCAATG 1 cut(s) 321
Bse8I GATNNNNATC 1 cut(s) 303
BseAI TCCGGA 1 cut(s) 910
BseBI CCWGG 2 cut(s) 795, 1593
BseDI CCNNGG 3 cut(s) 345, 445, 794
BseGI GGATG 5 cut(s) 208, 307, 614, 1097, 1466
BseJI GATNNNNATC 1 cut(s) 303
BseLI CCNNNNNNNGG 3 cut(s) 1129, 1253, 1526
BseMI GCAATG 1 cut(s) 321
BseMII CTCAG 5 cut(s) 204, 366, 971, 1119, 1646
BseNI ACTGG 3 cut(s) 610, 1028, 1246
BsePI GCGCGC 1 cut(s) 256
BseRI GAGGAG 3 cut(s) 28, 389, 1368
BseSI GKGCMC 2 cut(s) 1159, 1607
BseXI GCAGC 7 cut(s) 86, 328, 343, 350, 511, 874, 1600
Bsh1236I CGCG 1 cut(s) 258
BshFI GGCC 6 cut(s) 207, 350, 728, 1257, 1519, 1629
BshNI GGYRCC 1 cut(s) 1595
BsiHKAI GWGCWC 1 cut(s) 1607
BsiSI CCGG 2 cut(s) 312, 911
BslFI GGGAC 2 cut(s) 1230, 1231
BslI CCNNNNNNNGG 3 cut(s) 1129, 1253, 1526
BsmAI GTCTC 3 cut(s) 43, 960, 1535
BsmFI GGGAC 2 cut(s) 1230, 1231
BsnI GGCC 6 cut(s) 207, 350, 728, 1257, 1519, 1629
Bso31I GGTCTC 1 cut(s) 1535
Bsp1286I GDGCHC 2 cut(s) 1159, 1607
Bsp13I TCCGGA 1 cut(s) 910
Bsp1407I TGTACA 1 cut(s) 1036
Bsp143I GATC 4 cut(s) 143, 238, 1202, 1301
BspACI CCGC 2 cut(s) 527, 1123
BspANI GGCC 6 cut(s) 207, 350, 728, 1257, 1519, 1629
BspCNI CTCAG 5 cut(s) 203, 365, 970, 1120, 1645
BspEI TCCGGA 1 cut(s) 910
BspFNI CGCG 1 cut(s) 258
BspHI TCATGA 1 cut(s) 9
BspLI GGNNCC 2 cut(s) 1246, 1597
BspMAI CTGCAG 3 cut(s) 340, 762, 1590
BspPI GGATC 2 cut(s) 1197, 1309
BspT107I GGYRCC 1 cut(s) 1595
BspTI CTTAAG 1 cut(s) 197
BspTNI GGTCTC 1 cut(s) 1535
BsrDI GCAATG 1 cut(s) 321
BsrGI TGTACA 1 cut(s) 1036
BsrI ACTGG 3 cut(s) 610, 1028, 1246
BssECI CCNNGG 3 cut(s) 345, 445, 794
BssHII GCGCGC 1 cut(s) 256
BssMI GATC 4 cut(s) 143, 238, 1202, 1301
BssNI GRCGYC 1 cut(s) 1596
BssT1I CCWWGG 1 cut(s) 345
Bst2UI CCWGG 2 cut(s) 795, 1593
Bst4CI ACNGT 1 cut(s) 1420
Bst6I CTCTTC 3 cut(s) 388, 682, 1265
BstACI GRCGYC 1 cut(s) 1596
BstAFI CTTAAG 1 cut(s) 197
BstAPI GCANNNNNTGC 1 cut(s) 80
BstAUI TGTACA 1 cut(s) 1036
BstBAI YACGTR 1 cut(s) 811
BstC8I GCNNGC 2 cut(s) 72, 258
BstDEI CTNAG 8 cut(s) 190, 352, 403, 477, 957, 1128, 1266, 1632
BstF5I GGATG 5 cut(s) 208, 307, 614, 1097, 1466
BstFNI CGCG 1 cut(s) 258
BstH2I RGCGCY 1 cut(s) 1599
BstHHI GCGC 4 cut(s) 183, 258, 260, 1598
BstKTI GATC 4 cut(s) 146, 241, 1205, 1304
BstMAI GTCTC 3 cut(s) 43, 960, 1535
BstMBI GATC 4 cut(s) 143, 238, 1202, 1301
BstMWI GCNNNNNNNGC 6 cut(s) 80, 347, 356, 362, 893, 1602
BstNI CCWGG 2 cut(s) 795, 1593
BstSCI CCNGG 3 cut(s) 310, 793, 1591
BstSFI CTRYAG 4 cut(s) 336, 758, 1271, 1586
BstSLI GKGCMC 2 cut(s) 1159, 1607
BstUI CGCG 1 cut(s) 258
BstV1I GCAGC 7 cut(s) 86, 328, 343, 350, 511, 874, 1600
BstX2I RGATCY 1 cut(s) 143
BstYI RGATCY 1 cut(s) 143
Bsu36I CCTNAGG 1 cut(s) 1632
BsuI GTATCC 1 cut(s) 1035
BsuRI GGCC 6 cut(s) 207, 350, 728, 1257, 1519, 1629
BtsCI GGATG 5 cut(s) 208, 307, 614, 1097, 1466
BtsI GCAGTG 2 cut(s) 78, 190
BtsIMutI CAGTG 5 cut(s) 78, 190, 710, 1125, 1239
Cac8I GCNNGC 2 cut(s) 72, 258
CaiI CAGNNNCTG 1 cut(s) 80
CciI TCATGA 1 cut(s) 9
CfoI GCGC 4 cut(s) 183, 258, 260, 1598
Cfr13I GGNCC 5 cut(s) 937, 1169, 1244, 1517, 1628
Csp6I GTAC 1 cut(s) 1037
CviAII CATG 7 cut(s) 10, 268, 410, 531, 1034, 1079, 1413
CviQI GTAC 1 cut(s) 1037
DdeI CTNAG 8 cut(s) 190, 352, 403, 477, 957, 1128, 1266, 1632
DinI GGCGCC 1 cut(s) 1597
DpnI GATC 4 cut(s) 145, 240, 1204, 1303
DpnII GATC 4 cut(s) 143, 238, 1202, 1301
DraI TTTAAA 1 cut(s) 1281
DraIII CACNNNGTG 2 cut(s) 1331, 1450
Eam1104I CTCTTC 3 cut(s) 388, 682, 1265
EarI CTCTTC 3 cut(s) 388, 682, 1265
Eco130I CCWWGG 1 cut(s) 345
Eco147I AGGCCT 1 cut(s) 1257
Eco31I GGTCTC 1 cut(s) 1535
Eco32I GATATC 1 cut(s) 1644
Eco47I GGWCC 3 cut(s) 937, 1169, 1244
Eco57I CTGAAG 1 cut(s) 69
Eco81I CCTNAGG 1 cut(s) 1632
EcoO109I RGGNCCY 2 cut(s) 937, 1169
EcoRII CCWGG 2 cut(s) 793, 1591
EcoRV GATATC 1 cut(s) 1644
EcoT14I CCWWGG 1 cut(s) 345
EgeI GGCGCC 1 cut(s) 1597
EheI GGCGCC 1 cut(s) 1597
ErhI CCWWGG 1 cut(s) 345
FaeI CATG 7 cut(s) 13, 271, 413, 534, 1037, 1082, 1416
FalI AAGNNNNNCTT 2 cut(s) 271, 303
FaqI GGGAC 2 cut(s) 1230, 1231
FatI CATG 7 cut(s) 9, 267, 409, 530, 1033, 1078, 1412
FauNDI CATATG 1 cut(s) 1558
FbaI TGATCA 1 cut(s) 238
Fnu4HI GCNGC 8 cut(s) 75, 339, 342, 357, 525, 528, 888, 1589
FokI GGATG 5 cut(s) 215, 294, 621, 1104, 1453
Fsp4HI GCNGC 8 cut(s) 75, 339, 342, 357, 525, 528, 888, 1589
FspBI CTAG 6 cut(s) 35, 44, 209, 860, 1250, 1407
GlaI GCGC 4 cut(s) 182, 257, 259, 1597
GluI GCNGC 8 cut(s) 75, 339, 342, 357, 525, 528, 888, 1589
HaeII RGCGCY 1 cut(s) 1599
HaeIII GGCC 6 cut(s) 207, 350, 728, 1257, 1519, 1629
HapII CCGG 2 cut(s) 312, 911
HhaI GCGC 4 cut(s) 183, 258, 260, 1598
Hin1I GRCGYC 1 cut(s) 1596
Hin1II CATG 7 cut(s) 13, 271, 413, 534, 1037, 1082, 1416
Hin6I GCGC 4 cut(s) 181, 256, 258, 1596
HinP1I GCGC 4 cut(s) 181, 256, 258, 1596
HincII GTYRAC 1 cut(s) 964
HindII GTYRAC 1 cut(s) 964
HinfI GANTC 4 cut(s) 171, 188, 441, 461
HpaII CCGG 2 cut(s) 312, 911
HphI GGTGA 5 cut(s) 341, 1112, 1296, 1331, 1462
Hpy166II GTNNAC 8 cut(s) 152, 580, 784, 868, 964, 1039, 1605, 1615
Hpy188I TCNGA 8 cut(s) 88, 238, 319, 446, 508, 874, 1195, 1372
Hpy188III TCNNGA 5 cut(s) 10, 192, 911, 932, 1172
Hpy8I GTNNAC 8 cut(s) 152, 580, 784, 868, 964, 1039, 1605, 1615
Hpy99I CGWCG 1 cut(s) 512
HpyAV CCTTC 6 cut(s) 671, 908, 1071, 1208, 1403, 1508
HpyCH4III ACNGT 1 cut(s) 1420
HpyCH4IV ACGT 2 cut(s) 810, 1617
HpyF10VI GCNNNNNNNGC 6 cut(s) 80, 347, 356, 362, 893, 1602
HpyF3I CTNAG 8 cut(s) 190, 352, 403, 477, 957, 1128, 1266, 1632
HpySE526I ACGT 2 cut(s) 810, 1617
Hsp92I GRCGYC 1 cut(s) 1596
Hsp92II CATG 7 cut(s) 13, 271, 413, 534, 1037, 1082, 1416
HspAI GCGC 4 cut(s) 181, 256, 258, 1596
KasI GGCGCC 1 cut(s) 1595
Kpn2I TCCGGA 1 cut(s) 910
Ksp22I TGATCA 1 cut(s) 238
Kzo9I GATC 4 cut(s) 143, 238, 1202, 1301
LmnI GCTCC 3 cut(s) 15, 253, 1016
Lsp1109I GCAGC 7 cut(s) 86, 328, 343, 350, 511, 874, 1600
LweI GCATC 2 cut(s) 463, 1039
MaeI CTAG 6 cut(s) 35, 44, 209, 860, 1250, 1407
MaeII ACGT 2 cut(s) 810, 1617
MaeIII GTNAC 3 cut(s) 185, 500, 838
MalI GATC 4 cut(s) 145, 240, 1204, 1303
MboI GATC 4 cut(s) 143, 238, 1202, 1301
MboII GAAGA 7 cut(s) 375, 482, 699, 848, 1067, 1252, 1561
MfeI CAATTG 2 cut(s) 904, 1660
MflI RGATCY 1 cut(s) 143
MhlI GDGCHC 2 cut(s) 1159, 1607
MluCI AATT 7 cut(s) 27, 294, 904, 921, 1230, 1388, 1660
Mly113I GGCGCC 1 cut(s) 1596
MlyI GAGTC 2 cut(s) 180, 182
MmeI TCCRAC 4 cut(s) 531, 1069, 1230, 1562
MroI TCCGGA 1 cut(s) 910
MseI TTAA 3 cut(s) 93, 198, 1280
MslI CAYNNNNRTG 1 cut(s) 1047
MspA1I CMGCKG 2 cut(s) 341, 356
MspCI CTTAAG 1 cut(s) 197
MspI CCGG 2 cut(s) 312, 911
MspR9I CCNGG 3 cut(s) 312, 795, 1593
MunI CAATTG 2 cut(s) 904, 1660
MvaI CCWGG 2 cut(s) 795, 1593
MvnI CGCG 1 cut(s) 258
MwoI GCNNNNNNNGC 6 cut(s) 80, 347, 356, 362, 893, 1602
NarI GGCGCC 1 cut(s) 1596
NciI CCSGG 1 cut(s) 312
NdeI CATATG 1 cut(s) 1558
NdeII GATC 4 cut(s) 143, 238, 1202, 1301
NlaIII CATG 7 cut(s) 13, 271, 413, 534, 1037, 1082, 1416
NlaIV GGNNCC 2 cut(s) 1246, 1597
NmeAIII GCCGAG 1 cut(s) 1624
NmuCI GTSAC 1 cut(s) 185
PagI TCATGA 1 cut(s) 9
PauI GCGCGC 1 cut(s) 256
PceI AGGCCT 1 cut(s) 1257
PfeI GAWTC 2 cut(s) 441, 461
PkrI GCNGC 8 cut(s) 76, 340, 343, 358, 526, 529, 889, 1590
PleI GAGTC 2 cut(s) 179, 182
PluTI GGCGCC 1 cut(s) 1599
PpsI GAGTC 2 cut(s) 179, 182
Ppu21I YACGTR 1 cut(s) 811
PpuMI RGGWCCY 2 cut(s) 937, 1169
Psp5II RGGWCCY 2 cut(s) 937, 1169
Psp6I CCWGG 2 cut(s) 793, 1591
PspGI CCWGG 2 cut(s) 793, 1591
PspN4I GGNNCC 2 cut(s) 1246, 1597
PspPI GGNCC 5 cut(s) 937, 1169, 1244, 1517, 1628
PspPPI RGGWCCY 2 cut(s) 937, 1169
PstI CTGCAG 3 cut(s) 340, 762, 1590
PstNI CAGNNNCTG 1 cut(s) 80
PsuI RGATCY 1 cut(s) 143
PteI GCGCGC 1 cut(s) 256
PvuII CAGCTG 2 cut(s) 341, 356
RsaI GTAC 1 cut(s) 1038
RsaNI GTAC 1 cut(s) 1037
RseI CAYNNNNRTG 1 cut(s) 1047
SaqAI TTAA 3 cut(s) 93, 198, 1280
SatI GCNGC 8 cut(s) 75, 339, 342, 357, 525, 528, 888, 1589
Sau3AI GATC 4 cut(s) 143, 238, 1202, 1301
Sau96I GGNCC 5 cut(s) 937, 1169, 1244, 1517, 1628
SchI GAGTC 2 cut(s) 180, 182
ScrFI CCNGG 3 cut(s) 312, 795, 1593
SduI GDGCHC 2 cut(s) 1159, 1607
SfaNI GCATC 2 cut(s) 463, 1039
SfcI CTRYAG 4 cut(s) 336, 758, 1271, 1586
SfoI GGCGCC 1 cut(s) 1597
SinI GGWCC 3 cut(s) 937, 1169, 1244
SmiMI CAYNNNNRTG 1 cut(s) 1047
SmlI CTYRAG 4 cut(s) 197, 213, 566, 930
SmoI CTYRAG 4 cut(s) 197, 213, 566, 930
SpeI ACTAGT 1 cut(s) 34
Sse9I AATT 7 cut(s) 27, 294, 904, 921, 1230, 1388, 1660
SseBI AGGCCT 1 cut(s) 1257
SsiI CCGC 2 cut(s) 527, 1123
SspDI GGCGCC 1 cut(s) 1595
SspMI CTAG 6 cut(s) 35, 44, 209, 860, 1250, 1407
StuI AGGCCT 1 cut(s) 1257
StyD4I CCNGG 3 cut(s) 310, 793, 1591
StyI CCWWGG 1 cut(s) 345
TaaI ACNGT 1 cut(s) 1420
TaiI ACGT 2 cut(s) 813, 1620
TaqI TCGA 3 cut(s) 132, 1441, 1512
TaqII GACCGA 1 cut(s) 1215
TasI AATT 7 cut(s) 27, 294, 904, 921, 1230, 1388, 1660
TatI WGTACW 1 cut(s) 1036
TauI GCSGC 1 cut(s) 530
TfiI GAWTC 2 cut(s) 441, 461
Tru1I TTAA 3 cut(s) 93, 198, 1280
Tru9I TTAA 3 cut(s) 93, 198, 1280
TscAI CASTG 5 cut(s) 85, 190, 717, 1132, 1246
TseFI GTSAC 1 cut(s) 185
TseI GCWGC 7 cut(s) 74, 338, 341, 356, 524, 887, 1588
Tsp45I GTSAC 1 cut(s) 185
TspDTI ATGAA 6 cut(s) 315, 398, 474, 1022, 1067, 1227
TspRI CASTG 5 cut(s) 85, 190, 717, 1132, 1246
Vha464I CTTAAG 1 cut(s) 197
VneI GTGCAC 1 cut(s) 1603
VpaK11BI GGWCC 3 cut(s) 937, 1169, 1244
XapI RAATTY 2 cut(s) 921, 1388
XcmI CCANNNNNNNNNTGG 1 cut(s) 791
XspI CTAG 6 cut(s) 35, 44, 209, 860, 1250, 1407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.