FvH4_5g31880

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0010083
Physical Location & Seq
Forward (+)
22991119 .. 22994472
3354 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g31880.t1

Sequence Viewer

Length: 1941 bp
ATGTATCACATGTTATTCAAATCTCACATTCTACAAATGCACAAATCTGCAGATCACCAGTACACAGACAAAACCCTAAGAAACCCTCCGTTTCAATCAAACATCTCAGCTTTTCATTCATTCTGCATTTCACTCGCAACACTCCCTTTTTGCTATGCTGAATCCACAGCAGGGTTTATCCTCATCCCCATGAAGATTTACGACCCGAATCCAAAACCCTCCCAAACCCAAACCCAAACCCAATTTCTGATCGAGAATGTCTATGAGAGCCGCCGCGTTGTACCCGACGACGGCATGGCCGTCCAGATGAGCCTCTTGTTCTTCACCGCCCGCCCCAGTTTCTGGGGTCGAGCCTCCAAAATCGCCGCCTCCCACCTCCACACTCTCGCCGGAGCTCGCCCGAGACCCGAAAGAGAGGTACTGCTAAACCCTGAAGCCTGGTTTGTGAAAGTTGTCTACACTCTCTTTCTTCGCTCACATTCTTTGGATTCTTACGTGGGTTATTTGAGCAAGAACTTGACGCCTTCTTTGGCTTTTGAGGTTATTAAAAGGTTGAACAATCCCAAATTGGGGCTCAGGTTCTTTGAGCTCAGTAAGTTTAGTTTGAATGTTAATCATGGTGTGTGGACTTACCATTATCTGTTGAGGTCTTTGTGCCAAATGGGTCTTCAGGACTCGGCTAAGTTGGTGTTTGATTACATGAGGACTGATGGGCTTTCGCCCAATGAATCTGTTCTTGAGTTTTTGGTTTCATCGTGTGCTCAAATGGGGAGGTCGGATCTTGCGGAGAAGATTCTTGATGAGGTTCATTGCAGTGTGGTTGGGTTGTCAAGTTTTGTTTACAATAACTTGTTCAATGTGCTGGTTAAGCTGAATCGAGTAGATGAGGCTGTTTGCTTGTTTAGGAAGTATGTGGGGTCGTATTGTTGTCCAGATAGTTGGACGTTTAATATTTTGATTCGAGGTTTATGCAGAACTGGAGCAGTTGATAAGGGTTTAGAGTTTTTCAGTGATATGAGGAGTTTTGGTTGTTCTCCCAATGTTGTTACGTATAATACATTAATTAGTGGACTATGTAGAGCTCATGAGGTAGATAGAGGGTGTGATTTGCTCAGGGAGGTTCAGTTCAGAAGTGAACTTTCACCGGATGTTATAACTTTTACATCAGTTATATCCGGCTATTGCAAATTGGGTAGAATGGAGGAGGCATCTGCTATTTTTGACGAGATGATTGGTTGTGGACTTAAACCAACTGCAGTTACTTTTAATGCACTGATTGATGGATATGGTAAAGCAGGTGACATGAGTTCTGCATTTTCTCTGTATGAGAGTATGCTCTTTCATGGTCATTGTGCGGATGTGATCACCTTCACTTCCCTAATTGATGGCTATTGCCGAGCTGGGCACCTCAACCATGGGTTACAGCTCTGGCATGAGATGAATGCAAAAAATGTGTCTCCTAGTGCATATACTTTCTCTGTGCTTATTAATGCTTTGTGCAAGGGTAACAGACTATGTGAAGCACGTGATTTACTGAGGGAACTGAAGGGGAGTAATGTTGTTCCAAAATCATTTCTATATAACCCTGTGATAGATGGACTTTGCAAAGCTGGTAACATTGATGAGGCAAATTTGATTGTGGCAGAGATGGAGGAGAAGAAATGCACCCCTGATAGAGTGACATTCACTATTCTTATCCTGGGGAATTCTATGAAAGGGAGAATGTCTGAGGCAATTGGCAATTTTAGTAAGATGTTGTCCATCGGTTGCGCCCCTGATAAAATCACCATAGATTCTTTGATATCTTGCCTCTCGAAAGCTGGGATGCCCAGTGAGGCCGGTCGCATCAAGAAAATCGCATATGAGGACCTGAATATGGGTGCACCATCTATGGGGCGACCTCCTCATTTGAGAGCAAATGAGATTCCAGTGGCTGTTTGA

Protein Analysis

647

Amino Acids

72.04

Weight (kDa)

7.95

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 278 - 325 1.3e-10 PPR repeat family
PPR_1 PF12854 309 - 340 1.1e-09 PPR repeat
PPR_3 PF13812 311 - 356 5.5e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 311 - 360 4.5e-18 PPR repeat family
PPR PF01535 315 - 344 4.9e-07 PPR repeat
PPR_long PF17177 327 - 440 9e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 343 - 373 2.3e-12 PPR repeat
PPR_3 PF13812 370 - 431 7e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 380 - 410 3.4e-12 PPR repeat
PPR_2 PF13041 382 - 429 5.5e-15 PPR repeat family
PPR PF01535 385 - 415 1.4e-09 PPR repeat
PPR_1 PF12854 414 - 445 3.3e-09 PPR repeat
PPR_2 PF13041 417 - 466 6.8e-15 PPR repeat family
PPR PF01535 420 - 449 1.5e-07 PPR repeat
PPR_long PF17177 431 - 566 1.2e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 449 - 480 2e-10 PPR repeat
PPR_3 PF13812 452 - 499 4.1e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 453 - 501 2.6e-17 PPR repeat family
PPR PF01535 455 - 484 2e-06 PPR repeat
PPR_long PF17177 469 - 602 7.4e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 483 - 515 1.3e-06 PPR repeat
PPR_3 PF13812 511 - 566 1.2e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 519 - 551 1e-06 PPR repeat
PPR_2 PF13041 522 - 567 2.5e-12 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1154
AarI CACCTGC 1 cut(s) 1286
Acc36I ACCTGC 1 cut(s) 1286
AccB1I GGYRCC 1 cut(s) 1404
AccB7I CCANNNNNTGG 1 cut(s) 342
AccI GTMKAC 1 cut(s) 456
AccII CGCG 1 cut(s) 276
AciI CCGC 7 cut(s) 271, 274, 327, 331, 366, 785, 1355
AclWI GGATC 1 cut(s) 786
AcoI YGGCCR 1 cut(s) 297
AcsI RAATTY 2 cut(s) 1630, 1705
AcuI CTGAAG 3 cut(s) 453, 653, 1565
AcvI CACGTG 1 cut(s) 1526
AcyI GRCGYC 1 cut(s) 521
AfaI GTAC 3 cut(s) 62, 282, 420
AfiI CCNNNNNNNGG 7 cut(s) 171, 290, 342, 569, 570, 1876, 1892
AflIII ACRYGT 1 cut(s) 9
AgsI TTSAA 5 cut(s) 19, 95, 556, 607, 856
AjnI CCWGG 2 cut(s) 437, 1698
AjuI GAANNNNNNNTTGG 4 cut(s) 228, 260, 651, 683
AloI GAACNNNNNNTCC 2 cut(s) 1109, 1141
AluBI AGCT 9 cut(s) 110, 395, 589, 871, 1082, 1400, 1426, 1610, 1820
AluI AGCT 9 cut(s) 110, 395, 589, 871, 1082, 1400, 1426, 1610, 1820
Alw21I GWGCWC 5 cut(s) 397, 591, 763, 1084, 1885
Alw26I GTCTC 2 cut(s) 397, 1461
Alw44I GTGCAC 1 cut(s) 1881
AlwI GGATC 1 cut(s) 786
AlwNI CAGNNNCTG 2 cut(s) 342, 1934
Ama87I CYCGRG 1 cut(s) 400
AoxI GGCC 2 cut(s) 297, 1836
ApaLI GTGCAC 1 cut(s) 1881
ApoI RAATTY 2 cut(s) 1630, 1705
ArsI GACNNNNNNTTYG 4 cut(s) 511, 543, 1439, 1471
AseI ATTAAT 2 cut(s) 1061, 1488
Asp700I GAANNNNTTC 1 cut(s) 732
AspLEI GCGC 1 cut(s) 1772
AspS9I GGNCC 1 cut(s) 1867
AsuHPI GGTGA 6 cut(s) 47, 316, 1134, 1310, 1357, 1777
AvaI CYCGRG 1 cut(s) 400
AvaII GGWCC 1 cut(s) 1867
BaeGI GKGCMC 2 cut(s) 1407, 1885
BanI GGYRCC 1 cut(s) 1404
BanII GRGCYC 4 cut(s) 397, 576, 591, 1084
BbrPI CACGTG 1 cut(s) 1526
BbsI GAAGAC 1 cut(s) 659
Bbv12I GWGCWC 5 cut(s) 397, 591, 763, 1084, 1885
BccI CCATC 7 cut(s) 704, 1274, 1379, 1589, 1642, 1769, 1894
BceAI ACGGC 2 cut(s) 284, 307
BcgI CGANNNNNNTGC 4 cut(s) 115, 149, 951, 985
BciT130I CCWGG 2 cut(s) 439, 1700
BclI TGATCA 1 cut(s) 1362
BcoDI GTCTC 2 cut(s) 397, 1461
BfaI CTAG 1 cut(s) 1461
BfmI CTRYAG 2 cut(s) 48, 1254
BfuAI ACCTGC 1 cut(s) 1286
BisI GCNGC 3 cut(s) 271, 274, 366
BlsI GCNGC 3 cut(s) 272, 275, 367
Bme1390I CCNGG 2 cut(s) 439, 1700
Bme18I GGWCC 1 cut(s) 1867
BmeT110I CYCGRG 1 cut(s) 400
BmgT120I GGNCC 1 cut(s) 1867
BmiI GGNNCC 1 cut(s) 1406
BmrFI CCNGG 2 cut(s) 439, 1700
BmrI ACTGGG 2 cut(s) 330, 1824
BmsI GCATC 3 cut(s) 1217, 1815, 1854
BmuI ACTGGG 2 cut(s) 330, 1824
BpiI GAAGAC 1 cut(s) 659
BpmI CTGGAG 1 cut(s) 999
Bpu10I CCTNAGC 2 cut(s) 575, 1112
BpuEI CTTGAG 1 cut(s) 758
BsaAI YACGTR 3 cut(s) 496, 1050, 1526
BsaHI GRCGYC 1 cut(s) 521
BsaI GGTCTC 1 cut(s) 397
BsaJI CCNNGG 2 cut(s) 1414, 1699
BsaWI WCCGGW 1 cut(s) 1144
BsaXI ACNNNNNCTCC 4 cut(s) 1012, 1042, 1109, 1139
Bsc4I CCNNNNNNNGG 7 cut(s) 171, 290, 342, 569, 570, 1876, 1892
Bse118I RCCGGY 1 cut(s) 1838
Bse1I ACTGG 5 cut(s) 58, 336, 982, 1830, 1928
Bse3DI GCAATG 1 cut(s) 808
BseBI CCWGG 2 cut(s) 439, 1700
BseDI CCNNGG 2 cut(s) 1414, 1699
BseGI GGATG 4 cut(s) 183, 1153, 1363, 1830
BseLI CCNNNNNNNGG 7 cut(s) 171, 290, 342, 569, 570, 1876, 1892
BseMI GCAATG 1 cut(s) 808
BseMII CTCAG 6 cut(s) 120, 589, 604, 1126, 1526, 1719
BseNI ACTGG 5 cut(s) 58, 336, 982, 1830, 1928
BseRI GAGGAG 4 cut(s) 1033, 1217, 1667, 1893
BseSI GKGCMC 2 cut(s) 1407, 1885
BseYI CCCAGC 2 cut(s) 1400, 1820
Bsh1236I CGCG 1 cut(s) 276
Bsh1285I CGRYCG 1 cut(s) 1843
BshFI GGCC 2 cut(s) 299, 1838
BshNI GGYRCC 1 cut(s) 1404
BsiEI CGRYCG 1 cut(s) 1843
BsiHKAI GWGCWC 5 cut(s) 397, 591, 763, 1084, 1885
BsiHKCI CYCGRG 1 cut(s) 400
BsiSI CCGG 4 cut(s) 390, 1145, 1176, 1839
BslI CCNNNNNNNGG 7 cut(s) 171, 290, 342, 569, 570, 1876, 1892
BsmAI GTCTC 2 cut(s) 397, 1461
BsmI GAATGC 1 cut(s) 1447
BsnI GGCC 2 cut(s) 299, 1838
Bso31I GGTCTC 1 cut(s) 397
BsoBI CYCGRG 1 cut(s) 400
Bsp1286I GDGCHC 7 cut(s) 397, 576, 591, 763, 1084, 1407, 1885
Bsp143I GATC 4 cut(s) 52, 249, 778, 1362
Bsp19I CCATGG 1 cut(s) 1414
BspACI CCGC 7 cut(s) 271, 274, 327, 331, 366, 785, 1355
BspANI GGCC 2 cut(s) 299, 1838
BspCNI CTCAG 6 cut(s) 119, 588, 603, 1125, 1527, 1720
BspFNI CGCG 1 cut(s) 276
BspHI TCATGA 1 cut(s) 1084
BspLI GGNNCC 1 cut(s) 1406
BspMAI CTGCAG 2 cut(s) 52, 1258
BspMI ACCTGC 1 cut(s) 1286
BspPI GGATC 1 cut(s) 786
BspT107I GGYRCC 1 cut(s) 1404
BspTNI GGTCTC 1 cut(s) 397
BsrDI GCAATG 1 cut(s) 808
BsrFI RCCGGY 1 cut(s) 1838
BsrI ACTGG 5 cut(s) 58, 336, 982, 1830, 1928
BssAI RCCGGY 1 cut(s) 1838
BssECI CCNNGG 2 cut(s) 1414, 1699
BssMI GATC 4 cut(s) 52, 249, 778, 1362
BssNI GRCGYC 1 cut(s) 521
BssT1I CCWWGG 1 cut(s) 1414
Bst2UI CCWGG 2 cut(s) 439, 1700
BstACI GRCGYC 1 cut(s) 521
BstBAI YACGTR 3 cut(s) 496, 1050, 1526
BstC8I GCNNGC 2 cut(s) 331, 397
BstDEI CTNAG 8 cut(s) 77, 106, 575, 590, 681, 1112, 1535, 1728
BstDSI CCRYGG 1 cut(s) 1414
BstF5I GGATG 4 cut(s) 183, 1153, 1363, 1830
BstFNI CGCG 1 cut(s) 276
BstHHI GCGC 1 cut(s) 1772
BstKTI GATC 4 cut(s) 55, 252, 781, 1365
BstMAI GTCTC 2 cut(s) 397, 1461
BstMBI GATC 4 cut(s) 52, 249, 778, 1362
BstMCI CGRYCG 1 cut(s) 1843
BstMWI GCNNNNNNNGC 1 cut(s) 868
BstNI CCWGG 2 cut(s) 439, 1700
BstNSI RCATGY 1 cut(s) 13
BstSCI CCNGG 2 cut(s) 437, 1698
BstSFI CTRYAG 2 cut(s) 48, 1254
BstSLI GKGCMC 2 cut(s) 1407, 1885
BstSNI TACGTA 1 cut(s) 1050
BstUI CGCG 1 cut(s) 276
BstV2I GAAGAC 1 cut(s) 659
BstX2I RGATCY 1 cut(s) 778
BstXI CCANNNNNNTGG 1 cut(s) 939
BstYI RGATCY 1 cut(s) 778
BsuRI GGCC 2 cut(s) 299, 1838
BtgI CCRYGG 1 cut(s) 1414
BtsCI GGATG 4 cut(s) 183, 1153, 1363, 1830
BtsI GCAGTG 1 cut(s) 820
BtsIMutI CAGTG 5 cut(s) 820, 1015, 1271, 1837, 1935
BveI ACCTGC 1 cut(s) 1286
Cac8I GCNNGC 2 cut(s) 331, 397
CaiI CAGNNNCTG 2 cut(s) 342, 1934
CciI TCATGA 1 cut(s) 1084
CfoI GCGC 1 cut(s) 1772
Cfr10I RCCGGY 1 cut(s) 1838
Cfr13I GGNCC 1 cut(s) 1867
CseI GACGC 1 cut(s) 529
Csp6I GTAC 3 cut(s) 61, 281, 419
CviQI GTAC 3 cut(s) 61, 281, 419
DdeI CTNAG 8 cut(s) 77, 106, 575, 590, 681, 1112, 1535, 1728
DpnI GATC 4 cut(s) 54, 251, 780, 1364
DpnII GATC 4 cut(s) 52, 249, 778, 1362
EaeI YGGCCR 1 cut(s) 297
Ecl136II GAGCTC 3 cut(s) 395, 589, 1082
Eco105I TACGTA 1 cut(s) 1050
Eco130I CCWWGG 1 cut(s) 1414
Eco24I GRGCYC 4 cut(s) 397, 576, 591, 1084
Eco31I GGTCTC 1 cut(s) 397
Eco32I GATATC 1 cut(s) 1803
Eco47I GGWCC 1 cut(s) 1867
Eco53kI GAGCTC 3 cut(s) 395, 589, 1082
Eco57I CTGAAG 3 cut(s) 453, 653, 1565
Eco72I CACGTG 1 cut(s) 1526
Eco88I CYCGRG 1 cut(s) 400
EcoICRI GAGCTC 3 cut(s) 395, 589, 1082
EcoO109I RGGNCCY 1 cut(s) 1867
EcoRI GAATTC 1 cut(s) 1705
EcoRII CCWGG 2 cut(s) 437, 1698
EcoRV GATATC 1 cut(s) 1803
EcoT14I CCWWGG 1 cut(s) 1414
EcoT38I GRGCYC 4 cut(s) 397, 576, 591, 1084
ErhI CCWWGG 1 cut(s) 1414
FauI CCCGC 1 cut(s) 338
FauNDI CATATG 1 cut(s) 1861
FbaI TGATCA 1 cut(s) 1362
FblI GTMKAC 1 cut(s) 456
Fnu4HI GCNGC 3 cut(s) 271, 274, 366
FokI GGATG 4 cut(s) 170, 1160, 1370, 1837
FriOI GRGCYC 4 cut(s) 397, 576, 591, 1084
Fsp4HI GCNGC 3 cut(s) 271, 274, 366
FspBI CTAG 1 cut(s) 1461
GlaI GCGC 1 cut(s) 1771
GluI GCNGC 3 cut(s) 271, 274, 366
GsaI CCCAGC 2 cut(s) 1404, 1824
GsuI CTGGAG 1 cut(s) 999
HaeIII GGCC 2 cut(s) 299, 1838
HapII CCGG 4 cut(s) 390, 1145, 1176, 1839
HgaI GACGC 1 cut(s) 529
HhaI GCGC 1 cut(s) 1772
Hin1I GRCGYC 1 cut(s) 521
Hin6I GCGC 1 cut(s) 1770
HinP1I GCGC 1 cut(s) 1770
HpaII CCGG 4 cut(s) 390, 1145, 1176, 1839
HphI GGTGA 6 cut(s) 47, 316, 1134, 1310, 1357, 1777
Hpy166II GTNNAC 8 cut(s) 63, 457, 627, 841, 1070, 1136, 1241, 1883
Hpy188I TCNGA 4 cut(s) 249, 778, 1130, 1729
Hpy188III TCNNGA 9 cut(s) 253, 304, 671, 737, 797, 932, 1085, 1813, 1849
Hpy8I GTNNAC 8 cut(s) 63, 457, 627, 841, 1070, 1136, 1241, 1883
Hpy99I CGWCG 2 cut(s) 290, 293
HpyAV CCTTC 3 cut(s) 534, 1378, 1540
HpyCH4IV ACGT 4 cut(s) 495, 944, 1049, 1525
HpyF10VI GCNNNNNNNGC 1 cut(s) 868
HpyF3I CTNAG 8 cut(s) 77, 106, 575, 590, 681, 1112, 1535, 1728
HpySE526I ACGT 4 cut(s) 495, 944, 1049, 1525
Hsp92I GRCGYC 1 cut(s) 521
HspAI GCGC 1 cut(s) 1770
Ksp22I TGATCA 1 cut(s) 1362
Kzo9I GATC 4 cut(s) 52, 249, 778, 1362
LmnI GCTCC 2 cut(s) 392, 980
LweI GCATC 3 cut(s) 1217, 1815, 1854
MaeI CTAG 1 cut(s) 1461
MaeII ACGT 4 cut(s) 495, 944, 1049, 1525
MaeIII GTNAC 7 cut(s) 1045, 1258, 1298, 1419, 1505, 1613, 1678
MalI GATC 4 cut(s) 54, 251, 780, 1364
MboI GATC 4 cut(s) 52, 249, 778, 1362
MboII GAAGA 6 cut(s) 205, 313, 461, 659, 802, 1669
MfeI CAATTG 1 cut(s) 1734
MflI RGATCY 1 cut(s) 778
MhlI GDGCHC 7 cut(s) 397, 576, 591, 763, 1084, 1407, 1885
MluCI AATT 9 cut(s) 242, 566, 1062, 1187, 1380, 1630, 1705, 1734, 1741
MlyI GAGTC 1 cut(s) 668
MmeI TCCRAC 2 cut(s) 756, 920
MroXI GAANNNNTTC 1 cut(s) 732
MseI TTAA 8 cut(s) 546, 612, 867, 948, 1061, 1245, 1266, 1488
MslI CAYNNNNRTG 2 cut(s) 188, 813
MspI CCGG 4 cut(s) 390, 1145, 1176, 1839
MspR9I CCNGG 2 cut(s) 439, 1700
MunI CAATTG 1 cut(s) 1734
Mva1269I GAATGC 1 cut(s) 1447
MvaI CCWGG 2 cut(s) 439, 1700
MvnI CGCG 1 cut(s) 276
MwoI GCNNNNNNNGC 1 cut(s) 868
NcoI CCATGG 1 cut(s) 1414
NdeI CATATG 1 cut(s) 1861
NdeII GATC 4 cut(s) 52, 249, 778, 1362
NlaIV GGNNCC 1 cut(s) 1406
NmeAIII GCCGAG 2 cut(s) 656, 1421
NmuCI GTSAC 2 cut(s) 1298, 1678
NspI RCATGY 1 cut(s) 13
PagI TCATGA 1 cut(s) 1084
PaqCI CACCTGC 1 cut(s) 1286
PciI ACATGT 1 cut(s) 9
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PctI GAATGC 1 cut(s) 1447
PdmI GAANNNNTTC 1 cut(s) 732
PfeI GAWTC 9 cut(s) 161, 208, 488, 728, 793, 874, 958, 1793, 1924
PflMI CCANNNNNTGG 1 cut(s) 342
PkrI GCNGC 3 cut(s) 272, 275, 367
PleI GAGTC 1 cut(s) 668
PmaCI CACGTG 1 cut(s) 1526
PmlI CACGTG 1 cut(s) 1526
PpsI GAGTC 1 cut(s) 668
Ppu21I YACGTR 3 cut(s) 496, 1050, 1526
PpuMI RGGWCCY 1 cut(s) 1867
PscI ACATGT 1 cut(s) 9
PshBI ATTAAT 2 cut(s) 1061, 1488
PsiI TTATAA 1 cut(s) 1154
Psp124BI GAGCTC 3 cut(s) 397, 591, 1084
Psp5II RGGWCCY 1 cut(s) 1867
Psp6I CCWGG 2 cut(s) 437, 1698
PspCI CACGTG 1 cut(s) 1526
PspFI CCCAGC 2 cut(s) 1400, 1820
PspGI CCWGG 2 cut(s) 437, 1698
PspN4I GGNNCC 1 cut(s) 1406
PspPI GGNCC 1 cut(s) 1867
PspPPI RGGWCCY 1 cut(s) 1867
PstI CTGCAG 2 cut(s) 52, 1258
PstNI CAGNNNCTG 2 cut(s) 342, 1934
PsuI RGATCY 1 cut(s) 778
RsaI GTAC 3 cut(s) 62, 282, 420
RsaNI GTAC 3 cut(s) 61, 281, 419
RseI CAYNNNNRTG 2 cut(s) 188, 813
SacI GAGCTC 3 cut(s) 397, 591, 1084
SaqAI TTAA 8 cut(s) 546, 612, 867, 948, 1061, 1245, 1266, 1488
SatI GCNGC 3 cut(s) 271, 274, 366
Sau3AI GATC 4 cut(s) 52, 249, 778, 1362
Sau96I GGNCC 1 cut(s) 1867
SchI GAGTC 1 cut(s) 668
ScrFI CCNGG 2 cut(s) 439, 1700
SduI GDGCHC 7 cut(s) 397, 576, 591, 763, 1084, 1407, 1885
SfaNI GCATC 3 cut(s) 1217, 1815, 1854
SfcI CTRYAG 2 cut(s) 48, 1254
SinI GGWCC 1 cut(s) 1867
SmiMI CAYNNNNRTG 2 cut(s) 188, 813
SmlI CTYRAG 1 cut(s) 737
SmoI CTYRAG 1 cut(s) 737
SnaBI TACGTA 1 cut(s) 1050
Sse9I AATT 9 cut(s) 242, 566, 1062, 1187, 1380, 1630, 1705, 1734, 1741
SsiI CCGC 7 cut(s) 271, 274, 327, 331, 366, 785, 1355
SspI AATATT 1 cut(s) 952
SspMI CTAG 1 cut(s) 1461
SstI GAGCTC 3 cut(s) 397, 591, 1084
StyD4I CCNGG 2 cut(s) 437, 1698
StyI CCWWGG 1 cut(s) 1414
TaiI ACGT 4 cut(s) 498, 947, 1052, 1528
TaqI TCGA 5 cut(s) 252, 349, 877, 961, 1814
TasI AATT 9 cut(s) 242, 566, 1062, 1187, 1380, 1630, 1705, 1734, 1741
TatI WGTACW 1 cut(s) 60
TauI GCSGC 3 cut(s) 273, 276, 368
TfiI GAWTC 9 cut(s) 161, 208, 488, 728, 793, 874, 958, 1793, 1924
Tru1I TTAA 8 cut(s) 546, 612, 867, 948, 1061, 1245, 1266, 1488
Tru9I TTAA 8 cut(s) 546, 612, 867, 948, 1061, 1245, 1266, 1488
TscAI CASTG 5 cut(s) 820, 1015, 1278, 1837, 1935
TseFI GTSAC 2 cut(s) 1298, 1678
Tsp45I GTSAC 2 cut(s) 1298, 1678
TspDTI ATGAA 9 cut(s) 104, 108, 206, 741, 741, 797, 1331, 1454, 1727
TspGWI ACGGA 1 cut(s) 78
TspRI CASTG 5 cut(s) 820, 1015, 1278, 1837, 1935
Van91I CCANNNNNTGG 1 cut(s) 342
VneI GTGCAC 1 cut(s) 1881
VpaK11BI GGWCC 1 cut(s) 1867
VspI ATTAAT 2 cut(s) 1061, 1488
XapI RAATTY 2 cut(s) 1630, 1705
XceI RCATGY 1 cut(s) 13
XmiI GTMKAC 1 cut(s) 456
XmnI GAANNNNTTC 1 cut(s) 732
XspI CTAG 1 cut(s) 1461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.