RLG00000001605

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0010083
Physical Location & Seq
Reverse (-)
18135479 .. 18137224
1746 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001605

Sequence Viewer

Length: 1596 bp
ATGAAGATTCACGACCCGAACCCAAAACCCGGTCAAACCCAAACCCGAATTCTGATCGAGAATGTCTATGAGAGCCGCGCTGTGCCCGACGACGGCGTGGCCGTGCAGATGAGCCTCTTGTTCTTCACAGCCCGCCCCACTTTCTGGGCTCGAGCCTCCAAAATCGCCGCCTCCCATTTCCACGCTCTCGCCGGAGCTCGCCCCCGACCCGAGAGAGAGGTACTGCTAAACCCTGAGGCCTGGTTTGTGAAGGTTGTTTACACTCTCTTTCTTCGCTCGCATTCTTTGGATTCTTACTTGGGTTATTTGAGCAAGAACTTGACGCCTTCATTGGCCTTTGAGGTTATTAGAAGGTTGAACAACCCCAATTTGGGGCTCAAGTTCTTTGAGCTCAGTAAGTTCAGTTTGAGTGTTAATCATGGTGTGTGGACTTACAATTTTCTTTTGAGGTCATTGTGCCAAATGGGTCTTCAGGACTCGGCTAGATTGGTGTTTGATTACATGAGGATTGATGGGCTTTCGCCCGATGAATCAGTTGTTGAGTTTTTGGTTTCATCATGTGCTCAAATGAGTAGGTTGGATCTTGCAGAGAAGATTCTTGATGAGGTTCATTGCAGTGAGATTAGAACTGGAGCAATTGATAAGGCTTTTGAGTTTTTCAGTGATATGGGGAGTTTTGGTTGTTCCCCTGATGTTGTTACGTATAACACACTAATTAGTGGACTATGTAGAGCTAATGAGGTAGATAGAGGGTGTGATTTACTCAGGGAGGTTCAGTCAAGAAGTGAGCTTTCACCGGATGTTATAACTTTTACGTCGGTTATATCAGGCTATTGCAAATTGGGTAGAATGGAGGAGGCCTCTGCTATTTTTGATGAGATGATTGATTGTGGAGTTAGACCAACTGCAGTTACTTTTAATGCACTGATTGATGGATTTGGTAAAGCAGGTGACATGAGTTCTGCATTTGCTATGTATGAGAATATGCTCTTCCATGGTCATCGTGCGGATGTGATTACCTTCACTTCCCTAATTGATGGCTATTGTCGAGCTGGGCACCTGAACCATGGGTTACAGCTCTGGCATGAGATGAATGCAAAAAATATGTCTCCTACTGCATATACTTTCTCTGTGCTTATTAATGCTTTGTGCAAGGAGAATAGACTGTGTGAGGCTCGTGATTTACTGAGGGAACTGAAGTGGAGTAATGTTGTTCCAAAACCTTTTATATATAACCCTGTGGTAGACGGATTTTGCAAGGCTGGTAATGTTGATGAGGCGAATTTGATAGTGGCAGAGATGGAGGAGAAGAGATGTACCCCTGATAAAGTGACATTCACCATTCTTATCCTAGGGAATTCTATGAAAGGGAGAATGACTGAGGCAATTGGCAATTTTAATAAGATGTTGTCCATCGGTTGTGCCCCAGATAAAATCACTGTAGATTCTTTGATATCTTGCCTCTCCAAGGCTGGGATGCCCAGTGAAGCCCGCCGCATCAAGAAAATTGCATATGAGGACCTGAATTTGGGGGCGTCATCTATGGGAAGACCTCATCATTTGAGAGCAAATGCAGAAATTCCAGTGGCTATTTGA

Protein Analysis

532

Amino Acids

59.17

Weight (kDa)

6.25

Isoelectric Point (pI)

38.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 209 - 244 1.9e-11 PPR repeat family
PPR_long PF17177 210 - 323 2.9e-07 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 227 - 257 8.7e-14 PPR repeat
PPR_2 PF13041 230 - 261 8.2e-07 PPR repeat family
PPR_3 PF13812 254 - 315 1.8e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 264 - 294 2.7e-12 PPR repeat
PPR_2 PF13041 266 - 315 2.5e-16 PPR repeat family
PPR PF01535 269 - 299 4.9e-10 PPR repeat
PPR_1 PF12854 298 - 329 1.8e-08 PPR repeat
PPR_2 PF13041 301 - 350 1.6e-14 PPR repeat family
PPR PF01535 304 - 333 4.2e-06 PPR repeat
PPR_long PF17177 314 - 452 8.2e-10 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 328 - 383 4.9e-07 Pentatricopeptide repeat domain
TPR_24 PF23276 333 - 402 5.6e-06 Fungal tetratrico peptide repeats
PPR_1 PF12854 333 - 364 5.4e-10 PPR repeat
PPR_2 PF13041 337 - 385 5.5e-17 PPR repeat family
PPR PF01535 339 - 368 2.2e-06 PPR repeat
PPR_1 PF12854 367 - 399 1e-07 PPR repeat
PPR_1 PF12854 404 - 435 9.1e-07 PPR repeat
PPR_2 PF13041 409 - 451 2e-11 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 806
AarI CACCTGC 1 cut(s) 938
Acc36I ACCTGC 1 cut(s) 938
AccB1I GGYRCC 1 cut(s) 1056
AccB7I CCANNNNNTGG 1 cut(s) 144
AccI GTMKAC 1 cut(s) 1245
AccII CGCG 1 cut(s) 78
AciI CCGC 6 cut(s) 76, 133, 168, 1007, 1492, 1495
AclWI GGATC 1 cut(s) 588
AcoI YGGCCR 1 cut(s) 99
AcsI RAATTY 5 cut(s) 48, 1282, 1357, 1525, 1578
AcuI CTGAAG 2 cut(s) 455, 1217
AcyI GRCGYC 2 cut(s) 323, 1535
AfaI GTAC 2 cut(s) 222, 1318
AfiI CCNNNNNNNGG 9 cut(s) 29, 92, 144, 370, 371, 372, 1468, 1473, 1528
AgsI TTSAA 1 cut(s) 358
AjnI CCWGG 1 cut(s) 239
AjuI GAANNNNNNNTTGG 4 cut(s) 33, 65, 453, 485
AluBI AGCT 6 cut(s) 197, 391, 734, 790, 1052, 1078
AluI AGCT 6 cut(s) 197, 391, 734, 790, 1052, 1078
Alw21I GWGCWC 3 cut(s) 199, 393, 565
Alw26I GTCTC 1 cut(s) 1113
AlwI GGATC 1 cut(s) 588
Ama87I CYCGRG 2 cut(s) 150, 209
AoxI GGCC 4 cut(s) 99, 237, 333, 858
ApoI RAATTY 5 cut(s) 48, 1282, 1357, 1525, 1578
ArsI GACNNNNNNTTYG 2 cut(s) 1091, 1123
AseI ATTAAT 1 cut(s) 1140
AspA2I CCTAGG 1 cut(s) 1351
AspLEI GCGC 1 cut(s) 80
AspS9I GGNCC 1 cut(s) 1519
AsuC2I CCSGG 1 cut(s) 30
AsuHPI GGTGA 3 cut(s) 786, 962, 1330
AvaI CYCGRG 2 cut(s) 150, 209
AvaII GGWCC 1 cut(s) 1519
AvrII CCTAGG 1 cut(s) 1351
AxyI CCTNAGG 1 cut(s) 234
BaeGI GKGCMC 3 cut(s) 87, 1059, 1426
BanI GGYRCC 1 cut(s) 1056
BanII GRGCYC 4 cut(s) 151, 199, 378, 393
BarI GAAGNNNNNNTAC 2 cut(s) 242, 274
BauI CACGAG 1 cut(s) 1176
BbsI GAAGAC 2 cut(s) 461, 1555
Bbv12I GWGCWC 3 cut(s) 199, 393, 565
BccI CCATC 5 cut(s) 506, 926, 1031, 1294, 1421
BceAI ACGGC 2 cut(s) 86, 109
BciT130I CCWGG 1 cut(s) 241
BcnI CCSGG 1 cut(s) 30
BcoDI GTCTC 1 cut(s) 1113
BfaI CTAG 2 cut(s) 483, 1352
BfmI CTRYAG 2 cut(s) 906, 1440
BfuAI ACCTGC 1 cut(s) 938
BisI GCNGC 3 cut(s) 76, 168, 1495
BlnI CCTAGG 1 cut(s) 1351
BlsI GCNGC 3 cut(s) 77, 169, 1496
Bme1390I CCNGG 2 cut(s) 30, 241
Bme18I GGWCC 1 cut(s) 1519
BmeT110I CYCGRG 2 cut(s) 150, 209
BmgT120I GGNCC 1 cut(s) 1519
BmiI GGNNCC 1 cut(s) 1058
BmrFI CCNGG 2 cut(s) 30, 241
BmrI ACTGGG 1 cut(s) 1476
BmsI GCATC 2 cut(s) 1467, 1506
BmuI ACTGGG 1 cut(s) 1476
BpiI GAAGAC 2 cut(s) 461, 1555
BplI GAGNNNNNCTC 2 cut(s) 845, 877
BpmI CTGGAG 1 cut(s) 651
BpuEI CTTGAG 1 cut(s) 362
BpuMI CCSGG 1 cut(s) 30
BsaAI YACGTR 1 cut(s) 702
BsaHI GRCGYC 2 cut(s) 323, 1535
BsaJI CCNNGG 4 cut(s) 994, 1066, 1351, 1467
BsaWI WCCGGW 1 cut(s) 796
BsaXI ACNNNNNCTCC 4 cut(s) 664, 694, 761, 791
Bsc4I CCNNNNNNNGG 9 cut(s) 29, 92, 144, 370, 371, 372, 1468, 1473, 1528
Bse1I ACTGG 3 cut(s) 634, 1482, 1583
Bse21I CCTNAGG 1 cut(s) 234
Bse3DI GCAATG 1 cut(s) 610
BseBI CCWGG 1 cut(s) 241
BseDI CCNNGG 4 cut(s) 994, 1066, 1351, 1467
BseGI GGATG 3 cut(s) 805, 1015, 1482
BseLI CCNNNNNNNGG 9 cut(s) 29, 92, 144, 370, 371, 372, 1468, 1473, 1528
BseMI GCAATG 1 cut(s) 610
BseMII CTCAG 5 cut(s) 225, 406, 778, 1178, 1371
BseNI ACTGG 3 cut(s) 634, 1482, 1583
BseRI GAGGAG 2 cut(s) 869, 1319
BseSI GKGCMC 3 cut(s) 87, 1059, 1426
BseYI CCCAGC 2 cut(s) 1052, 1472
BsgI GTGCAG 1 cut(s) 125
Bsh1236I CGCG 1 cut(s) 78
BshFI GGCC 4 cut(s) 101, 239, 335, 860
BshNI GGYRCC 1 cut(s) 1056
BsiHKAI GWGCWC 3 cut(s) 199, 393, 565
BsiHKCI CYCGRG 2 cut(s) 150, 209
BsiSI CCGG 3 cut(s) 30, 192, 797
BslI CCNNNNNNNGG 9 cut(s) 29, 92, 144, 370, 371, 372, 1468, 1473, 1528
BsmAI GTCTC 1 cut(s) 1113
BsmI GAATGC 2 cut(s) 280, 1099
BsnI GGCC 4 cut(s) 101, 239, 335, 860
BsoBI CYCGRG 2 cut(s) 150, 209
Bsp1286I GDGCHC 8 cut(s) 87, 151, 199, 378, 393, 565, 1059, 1426
Bsp143I GATC 2 cut(s) 54, 580
Bsp19I CCATGG 2 cut(s) 994, 1066
BspACI CCGC 6 cut(s) 76, 133, 168, 1007, 1492, 1495
BspANI GGCC 4 cut(s) 101, 239, 335, 860
BspCNI CTCAG 5 cut(s) 226, 405, 777, 1179, 1372
BspFNI CGCG 1 cut(s) 78
BspLI GGNNCC 1 cut(s) 1058
BspMAI CTGCAG 1 cut(s) 910
BspMI ACCTGC 1 cut(s) 938
BspPI GGATC 1 cut(s) 588
BspQI GCTCTTC 1 cut(s) 995
BspT107I GGYRCC 1 cut(s) 1056
BsrDI GCAATG 1 cut(s) 610
BsrI ACTGG 3 cut(s) 634, 1482, 1583
BssECI CCNNGG 4 cut(s) 994, 1066, 1351, 1467
BssMI GATC 2 cut(s) 54, 580
BssNI GRCGYC 2 cut(s) 323, 1535
BssSI CACGAG 1 cut(s) 1176
BssT1I CCWWGG 4 cut(s) 994, 1066, 1351, 1467
Bst2BI CACGAG 1 cut(s) 1176
Bst2UI CCWGG 1 cut(s) 241
Bst4CI ACNGT 2 cut(s) 1167, 1441
Bst6I CTCTTC 2 cut(s) 995, 1304
BstACI GRCGYC 2 cut(s) 323, 1535
BstBAI YACGTR 1 cut(s) 702
BstC8I GCNNGC 4 cut(s) 133, 199, 278, 1492
BstDEI CTNAG 5 cut(s) 234, 392, 764, 1187, 1380
BstDSI CCRYGG 2 cut(s) 994, 1066
BstENI CCTNNNNNAGG 1 cut(s) 1466
BstF5I GGATG 3 cut(s) 805, 1015, 1482
BstFNI CGCG 1 cut(s) 78
BstHHI GCGC 1 cut(s) 80
BstKTI GATC 2 cut(s) 57, 583
BstMAI GTCTC 1 cut(s) 1113
BstMBI GATC 2 cut(s) 54, 580
BstNI CCWGG 1 cut(s) 241
BstSCI CCNGG 2 cut(s) 28, 239
BstSFI CTRYAG 2 cut(s) 906, 1440
BstSLI GKGCMC 3 cut(s) 87, 1059, 1426
BstSNI TACGTA 1 cut(s) 702
BstUI CGCG 1 cut(s) 78
BstV2I GAAGAC 2 cut(s) 461, 1555
BstX2I RGATCY 1 cut(s) 580
BstYI RGATCY 1 cut(s) 580
Bsu36I CCTNAGG 1 cut(s) 234
BsuRI GGCC 4 cut(s) 101, 239, 335, 860
BtgI CCRYGG 2 cut(s) 994, 1066
BtsCI GGATG 3 cut(s) 805, 1015, 1482
BtsI GCAGTG 1 cut(s) 622
BtsIMutI CAGTG 6 cut(s) 622, 667, 923, 1437, 1489, 1590
BveI ACCTGC 1 cut(s) 938
Cac8I GCNNGC 4 cut(s) 133, 199, 278, 1492
CfoI GCGC 1 cut(s) 80
Cfr13I GGNCC 1 cut(s) 1519
CseI GACGC 2 cut(s) 331, 1524
Csp6I GTAC 2 cut(s) 221, 1317
CviAII CATG 7 cut(s) 419, 502, 558, 955, 995, 1067, 1085
CviQI GTAC 2 cut(s) 221, 1317
DdeI CTNAG 5 cut(s) 234, 392, 764, 1187, 1380
DpnI GATC 2 cut(s) 56, 582
DpnII GATC 2 cut(s) 54, 580
EaeI YGGCCR 1 cut(s) 99
Eam1104I CTCTTC 2 cut(s) 995, 1304
EarI CTCTTC 2 cut(s) 995, 1304
Ecl136II GAGCTC 2 cut(s) 197, 391
Eco105I TACGTA 1 cut(s) 702
Eco130I CCWWGG 4 cut(s) 994, 1066, 1351, 1467
Eco147I AGGCCT 2 cut(s) 239, 860
Eco24I GRGCYC 4 cut(s) 151, 199, 378, 393
Eco32I GATATC 1 cut(s) 1455
Eco47I GGWCC 1 cut(s) 1519
Eco53kI GAGCTC 2 cut(s) 197, 391
Eco57I CTGAAG 2 cut(s) 455, 1217
Eco81I CCTNAGG 1 cut(s) 234
Eco88I CYCGRG 2 cut(s) 150, 209
EcoICRI GAGCTC 2 cut(s) 197, 391
EcoNI CCTNNNNNAGG 1 cut(s) 1466
EcoO109I RGGNCCY 1 cut(s) 1519
EcoRI GAATTC 2 cut(s) 48, 1357
EcoRII CCWGG 1 cut(s) 239
EcoRV GATATC 1 cut(s) 1455
EcoT14I CCWWGG 4 cut(s) 994, 1066, 1351, 1467
EcoT38I GRGCYC 4 cut(s) 151, 199, 378, 393
ErhI CCWWGG 4 cut(s) 994, 1066, 1351, 1467
FaeI CATG 7 cut(s) 422, 505, 561, 958, 998, 1070, 1088
FatI CATG 7 cut(s) 418, 501, 557, 954, 994, 1066, 1084
FauI CCCGC 2 cut(s) 140, 1499
FauNDI CATATG 1 cut(s) 1513
FblI GTMKAC 1 cut(s) 1245
Fnu4HI GCNGC 3 cut(s) 76, 168, 1495
FokI GGATG 3 cut(s) 812, 1022, 1489
FriOI GRGCYC 4 cut(s) 151, 199, 378, 393
Fsp4HI GCNGC 3 cut(s) 76, 168, 1495
FspBI CTAG 2 cut(s) 483, 1352
GlaI GCGC 1 cut(s) 79
GluI GCNGC 3 cut(s) 76, 168, 1495
GsaI CCCAGC 2 cut(s) 1056, 1476
GsuI CTGGAG 1 cut(s) 651
HaeIII GGCC 4 cut(s) 101, 239, 335, 860
HapII CCGG 3 cut(s) 30, 192, 797
HgaI GACGC 2 cut(s) 331, 1524
HhaI GCGC 1 cut(s) 80
Hin1I GRCGYC 2 cut(s) 323, 1535
Hin1II CATG 7 cut(s) 422, 505, 561, 958, 998, 1070, 1088
Hin6I GCGC 1 cut(s) 78
HinP1I GCGC 1 cut(s) 78
HinfI GANTC 6 cut(s) 7, 290, 476, 530, 595, 1445
HpaII CCGG 3 cut(s) 30, 192, 797
HphI GGTGA 3 cut(s) 786, 962, 1330
Hpy166II GTNNAC 4 cut(s) 259, 429, 722, 1246
Hpy188I TCNGA 1 cut(s) 54
Hpy188III TCNNGA 7 cut(s) 11, 58, 473, 599, 780, 1178, 1501
Hpy8I GTNNAC 4 cut(s) 259, 429, 722, 1246
Hpy99I CGWCG 3 cut(s) 92, 95, 820
HpyAV CCTTC 4 cut(s) 244, 336, 345, 1030
HpyCH4III ACNGT 2 cut(s) 1167, 1441
HpyCH4IV ACGT 2 cut(s) 701, 815
HpyF3I CTNAG 5 cut(s) 234, 392, 764, 1187, 1380
HpySE526I ACGT 2 cut(s) 701, 815
Hsp92I GRCGYC 2 cut(s) 323, 1535
Hsp92II CATG 7 cut(s) 422, 505, 561, 958, 998, 1070, 1088
HspAI GCGC 1 cut(s) 78
Kzo9I GATC 2 cut(s) 54, 580
LguI GCTCTTC 1 cut(s) 995
LmnI GCTCC 2 cut(s) 194, 632
LweI GCATC 2 cut(s) 1467, 1506
MaeI CTAG 2 cut(s) 483, 1352
MaeII ACGT 2 cut(s) 701, 815
MaeIII GTNAC 5 cut(s) 697, 910, 950, 1071, 1330
MalI GATC 2 cut(s) 56, 582
MboI GATC 2 cut(s) 54, 580
MboII GAAGA 8 cut(s) 16, 115, 263, 461, 604, 982, 1321, 1560
MfeI CAATTG 2 cut(s) 636, 1386
MflI RGATCY 1 cut(s) 580
MhlI GDGCHC 8 cut(s) 87, 151, 199, 378, 393, 565, 1059, 1426
MlyI GAGTC 1 cut(s) 470
MmeI TCCRAC 1 cut(s) 558
MseI TTAA 4 cut(s) 414, 918, 1140, 1398
MslI CAYNNNNRTG 1 cut(s) 615
MspI CCGG 3 cut(s) 30, 192, 797
MspR9I CCNGG 2 cut(s) 30, 241
MunI CAATTG 2 cut(s) 636, 1386
Mva1269I GAATGC 2 cut(s) 280, 1099
MvaI CCWGG 1 cut(s) 241
MvnI CGCG 1 cut(s) 78
NciI CCSGG 1 cut(s) 30
NcoI CCATGG 2 cut(s) 994, 1066
NdeI CATATG 1 cut(s) 1513
NdeII GATC 2 cut(s) 54, 580
NlaIII CATG 7 cut(s) 422, 505, 561, 958, 998, 1070, 1088
NlaIV GGNNCC 1 cut(s) 1058
NmeAIII GCCGAG 1 cut(s) 458
NmuCI GTSAC 2 cut(s) 950, 1330
PaeR7I CTCGAG 1 cut(s) 150
PaqCI CACCTGC 1 cut(s) 938
PceI AGGCCT 2 cut(s) 239, 860
PciSI GCTCTTC 1 cut(s) 995
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PctI GAATGC 2 cut(s) 280, 1099
PfeI GAWTC 5 cut(s) 7, 290, 530, 595, 1445
PflMI CCANNNNNTGG 1 cut(s) 144
PkrI GCNGC 3 cut(s) 77, 169, 1496
PleI GAGTC 1 cut(s) 470
PpsI GAGTC 1 cut(s) 470
Ppu21I YACGTR 1 cut(s) 702
PpuMI RGGWCCY 1 cut(s) 1519
PshBI ATTAAT 1 cut(s) 1140
PsiI TTATAA 1 cut(s) 806
Psp124BI GAGCTC 2 cut(s) 199, 393
Psp5II RGGWCCY 1 cut(s) 1519
Psp6I CCWGG 1 cut(s) 239
PspFI CCCAGC 2 cut(s) 1052, 1472
PspGI CCWGG 1 cut(s) 239
PspN4I GGNNCC 1 cut(s) 1058
PspPI GGNCC 1 cut(s) 1519
PspPPI RGGWCCY 1 cut(s) 1519
PspXI VCTCGAGB 1 cut(s) 150
PstI CTGCAG 1 cut(s) 910
PsuI RGATCY 1 cut(s) 580
RsaI GTAC 2 cut(s) 222, 1318
RsaNI GTAC 2 cut(s) 221, 1317
RseI CAYNNNNRTG 1 cut(s) 615
SacI GAGCTC 2 cut(s) 199, 393
SapI GCTCTTC 1 cut(s) 995
SaqAI TTAA 4 cut(s) 414, 918, 1140, 1398
SatI GCNGC 3 cut(s) 76, 168, 1495
Sau3AI GATC 2 cut(s) 54, 580
Sau96I GGNCC 1 cut(s) 1519
SchI GAGTC 1 cut(s) 470
ScrFI CCNGG 2 cut(s) 30, 241
SduI GDGCHC 8 cut(s) 87, 151, 199, 378, 393, 565, 1059, 1426
SfaNI GCATC 2 cut(s) 1467, 1506
SfcI CTRYAG 2 cut(s) 906, 1440
Sfr274I CTCGAG 1 cut(s) 150
SinI GGWCC 1 cut(s) 1519
SlaI CTCGAG 1 cut(s) 150
SmiMI CAYNNNNRTG 1 cut(s) 615
SmlI CTYRAG 2 cut(s) 150, 377
SmoI CTYRAG 2 cut(s) 150, 377
SnaBI TACGTA 1 cut(s) 702
SseBI AGGCCT 2 cut(s) 239, 860
SsiI CCGC 6 cut(s) 76, 133, 168, 1007, 1492, 1495
SspMI CTAG 2 cut(s) 483, 1352
SstI GAGCTC 2 cut(s) 199, 393
StuI AGGCCT 2 cut(s) 239, 860
StyD4I CCNGG 2 cut(s) 28, 239
StyI CCWWGG 4 cut(s) 994, 1066, 1351, 1467
TaaI ACNGT 2 cut(s) 1167, 1441
TaiI ACGT 2 cut(s) 704, 818
TaqI TCGA 3 cut(s) 57, 151, 1048
TauI GCSGC 3 cut(s) 78, 170, 1497
TfiI GAWTC 5 cut(s) 7, 290, 530, 595, 1445
Tru1I TTAA 4 cut(s) 414, 918, 1140, 1398
Tru9I TTAA 4 cut(s) 414, 918, 1140, 1398
TscAI CASTG 6 cut(s) 622, 667, 930, 1444, 1489, 1590
TseFI GTSAC 2 cut(s) 950, 1330
Tsp45I GTSAC 2 cut(s) 950, 1330
TspDTI ATGAA 7 cut(s) 17, 318, 543, 543, 599, 1106, 1379
TspGWI ACGGA 1 cut(s) 1263
TspRI CASTG 6 cut(s) 622, 667, 930, 1444, 1489, 1590
Van91I CCANNNNNTGG 1 cut(s) 144
VpaK11BI GGWCC 1 cut(s) 1519
VspI ATTAAT 1 cut(s) 1140
XagI CCTNNNNNAGG 1 cut(s) 1466
XapI RAATTY 5 cut(s) 48, 1282, 1357, 1525, 1578
XhoI CTCGAG 1 cut(s) 150
XmaJI CCTAGG 1 cut(s) 1351
XmiI GTMKAC 1 cut(s) 1245
XspI CTAG 2 cut(s) 483, 1352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.