Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0005981

Physical Location & Seq

Genomic Coordinates Reverse (-)

25488681 .. 25496450

Gene Structure 7770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g34830.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGAGTTCGAGTTCGGATTTGGTGCGGAAGCTGGAGTCGGCGCTCGGGGTTTCGTTCGGGGAGTCGGTGACGGACACGGCGGTGCTGATCGCGACGACTTCAATTGCGCTGATCATTGGAGTTCTGGTGGTTCTGTGGCGGAGATCGTCGGATCGGAGCCGCGAGTTTAAGCAGCTGGCGGTGCCTAAGGCGGTGGTGGTTAAGGAGGAGGAAGATGAGTTTGAGGTCGCGTCGGGGAAGACTAGGGTTAGTATATTCTATGGGACTCAGACCGGCACAGCTGAAGGTTTCGCCAAGGCTTTGGCGGAAGAGATCAAGGCAAGATATGAGAAGGCTGCTGTCAAGGTTATTGACCTGGATGATTATGCCGCGGAGGATGATAAATATGGAGAAAAACTGAAGAAAGAGACTATGGTATTTTTTATGTTGGCCACTTATGGAGATGGAGAACCGACTGATAATGCAGCAAGATTTTACAAATGGTTTACTGAGGGAACAGATCGGGGTGTCTGGCTGGAACAACTAAGATATGGTGTTTTTGGTCTGGGTAACAGGCAGTATGAACATTTTAATAAGATAGCGAAAGTGGTTGACGATTTGCTTGTTGAACAAGGTGCAAAGCGTCTTGTTACCGTTGGCTTAGGTGATGATGATCAATGCATTGAGGATGACTTTTCTGCTTGGAAGGAAGCACTGTGGCCCGAGCTAGATCAATTACTCCAGGATGATACAAATACTGTGTCCACCCCATATACAGCTGTGATTCCTGAATACAGAGTTGTTATTCATGATCCCAGTGTTACCTCTTTTGAGGATCAGAACTCGAATATGGCAAATGGGAATACTTCTTATGACATTCATCATCCTTGCAGAGTTAATGTTGCTGCTCAGAAAGAGCTCCATAAGCCTGAGTCTGATCGCTCTTGCATACATCTGGAATTTGACATCCATGGAACTGGTATTACTTACGAAACTGGAGACCATGTGGGTGTTTATGCAGATAATTGTGATGACACAGTTGAAGAAGCTGCAAAGTTGTTGGGTCAACCTTTAGATTTGCTGTTCTCCATTCACACCGACAATGATGATGGCACATCGCTTGGAAGCTCATTGCCGCCTCCTTTCCCTGGTCCTTGCACACTCAAAACAGCATTGGCATGTTATGCTGACCTGTTGAACCCACCTAAGAAGGCCGCTCTCAATGCTTTGGCTGCACATGCTGTTGAACCTAGTGAGGCAGAAAGACTAAAGTTCTTATCATCACCTCAGGGGAAGGATGAGTACTCAAAATGGGTTGTTGGAAGTCAGAGAAGTATTGTAGAGGTAATGGCTGAATTCCCATCAGCAAAGCCTCCGCTAGGCGTGTTTTTTGCTGCAGTTGCCCCTCGCTTGCAGCCTCGTTACTATTCAATTTCATCGTCACCAAGGTTTGCCCCGAATCGTGTTCATGTGACCTCTGCTTTGGTTTATGGTCCTACTCCGACTGGCAGAATACACAAAGGAGTGTGTTCATTCTGGATGAAGAATGCAGTCCCGCTAGAGAAAAGCCAGAACTGTAGCCAGGCTCCTATTTTTATTAGGCAATCTAATTTCAGATTACCTTCTGACCATTCAGTCCCAATTGTCATGGTGGGGCCTGGTACAGGATTAGCACCTTTCCGAGGATTTCTACAGGAAAGATTAGCCCTCAAAGAGGAAGGTGCTCAACTTGGTCCTGCAGTTCTCTTCTTTGGTTGTAGAAACCGCCAAATGGATTTCATATATGAAGACGAGTTGAATAATTTTGTGGAACAAGGTGCACTATCAGAGTTAATTGTTGCATTCTCACGGGAAGGACCATCAAAGGAGTATGTTCAACATAAGATGATGGAGAAAGCAGCATACATGTGGAACCTAATATCACAAGGGGGATACTTCTACGTATGTGGTGATGCCAAGGGTATGGCAAGAGATGTTCATCGGACTTTGCATACCATTGTCCAACAAGAGGATAAGGTAGACTCGACAAAGGCAGAGGCTATAGTGAAAAAGCTCCAGATGGATGGCCGATACCTCAGGGATGTCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0003958 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006725 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009698 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0012505 GO:0016491 GO:0016651 GO:0016653 GO:0019748 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:0097305 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

690

Amino Acids

76.51

Weight (kDa)

5.25

Isoelectric Point (pI)

37.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	85 - 228	2.1e-33	Flavodoxin
FAD_binding_1	PF00667	285 - 506	2.6e-75	FAD binding domain
NAD_binding_1	PF00175	543 - 653	1.3e-15	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005981)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24520 AT4G24520
fragaria_vesca	FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 FvH4_5g34830
malus_domestica	MD08G1199100.v1.1 MD15G1386100.v1.1
prunus_persica	Prupe.1G532800_v2.0.a1 Prupe.1G532800_v2.0.a1 Prupe.1G532800_v2.0.a1
pyrus_communis	pycom08g17290 pycom15g34630
rosa_chinensis	RchiOBHm_Chr7g0235511
rosa_laevigata	RLG00000001153
rosa_multiflora	Rmu_sc0002617.1_g000018 Rmu_sc0002892.1_g000021 Rmu_sc0039003.1_g000003 Rmu_sc0042677.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225940
rosa_rugosa	Rorug07G0291400
rosa_samantha	Rh7AG446500 Rh7BG418200 Rh7CG466500 Rh7DG435200
rosa_wichuraiana	Rw7G037070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1613
AccB1I	GGYRCC	1 cut(s)	181
AccBSI	CCGCTC	1 cut(s)	1196
AccI	GTMKAC	1 cut(s)	1998
AccII	CGCG	4 cut(s)	92, 162, 230, 371
AclWI	GGATC	3 cut(s)	159, 785, 822
AcoI	YGGCCR	2 cut(s)	429, 2044
AcsI	RAATTY	2 cut(s)	938, 1334
AcuI	CTGAAG	2 cut(s)	303, 419
AfaI	GTAC	2 cut(s)	1283, 1642
AfiI	CCNNNNNNNGG	7 cut(s)	1127, 1358, 1643, 1661, 1693, 1750, 1987
AflIII	ACRYGT	1 cut(s)	1884
AgsI	TTSAA	8 cut(s)	102, 608, 1022, 1177, 1226, 1410, 1777, 1856
AjnI	CCWGG	5 cut(s)	354, 720, 1126, 1560, 1636
AleI	CACNNNNGTG	1 cut(s)	80
AluBI	AGCT	9 cut(s)	31, 175, 281, 706, 758, 898, 1028, 1107, 2032
AluI	AGCT	9 cut(s)	31, 175, 281, 706, 758, 898, 1028, 1107, 2032
Alw21I	GWGCWC	3 cut(s)	900, 1705, 1801
Alw26I	GTCTC	2 cut(s)	401, 972
Alw44I	GTGCAC	1 cut(s)	1797
AlwI	GGATC	3 cut(s)	159, 785, 822
Ama87I	CYCGRG	2 cut(s)	44, 701
AoxI	GGCC	5 cut(s)	429, 698, 1191, 1634, 2044
ApaLI	GTGCAC	1 cut(s)	1797
ApeKI	GCWGC	9 cut(s)	172, 335, 464, 884, 1028, 1211, 1373, 1393, 1877
ApoI	RAATTY	2 cut(s)	938, 1334
ArsI	GACNNNNNNTTYG	4 cut(s)	725, 757, 1444, 1476
AspLEI	GCGC	2 cut(s)	43, 109
AspS9I	GGNCC	6 cut(s)	699, 1130, 1472, 1634, 1712, 1835
AsuHPI	GGTGA	5 cut(s)	79, 656, 1254, 1413, 1940
AvaI	CYCGRG	2 cut(s)	44, 701
AvaII	GGWCC	4 cut(s)	1130, 1472, 1712, 1835
AxyI	CCTNAGG	3 cut(s)	186, 1266, 2054
BaeGI	GKGCMC	1 cut(s)	1801
BalI	TGGCCA	1 cut(s)	431
BanI	GGYRCC	1 cut(s)	181
BanII	GRGCYC	1 cut(s)	900
BarI	GAAGNNNNNNTAC	2 cut(s)	1265, 1297
BbsI	GAAGAC	2 cut(s)	245, 1773
Bbv12I	GWGCWC	3 cut(s)	900, 1705, 1801
BbvI	GCAGC	9 cut(s)	184, 322, 476, 871, 1015, 1198, 1360, 1405, 1889
BccI	CCATC	7 cut(s)	437, 1082, 1348, 1846, 1861, 2032, 2036
BceAI	ACGGC	1 cut(s)	93
BciT130I	CCWGG	5 cut(s)	356, 722, 1128, 1562, 1638
BciVI	GTATCC	1 cut(s)	1904
BclI	TGATCA	2 cut(s)	111, 652
BcoDI	GTCTC	2 cut(s)	401, 972
BfaI	CTAG	5 cut(s)	243, 707, 1230, 1358, 1538
BfmI	CTRYAG	5 cut(s)	1374, 1555, 1670, 1716, 2019
BfoI	RGCGCY	1 cut(s)	44
BfuI	GTATCC	1 cut(s)	1904
BmcAI	AGTACT	1 cut(s)	1283
Bme1390I	CCNGG	5 cut(s)	356, 722, 1128, 1562, 1638
Bme18I	GGWCC	4 cut(s)	1130, 1472, 1712, 1835
BmeT110I	CYCGRG	2 cut(s)	44, 701
BmgT120I	GGNCC	6 cut(s)	699, 1130, 1472, 1634, 1712, 1835
BmiI	GGNNCC	5 cut(s)	158, 183, 1566, 1635, 1892
BmrFI	CCNGG	5 cut(s)	356, 722, 1128, 1562, 1638
BmrI	ACTGGG	1 cut(s)	789
BmsI	GCATC	1 cut(s)	1921
BmuI	ACTGGG	1 cut(s)	789
BpiI	GAAGAC	2 cut(s)	245, 1773
BpmI	CTGGAG	4 cut(s)	53, 704, 996, 2018
Bpu10I	CCTNAGC	1 cut(s)	640
BsaAI	YACGTR	1 cut(s)	1921
BsaBI	GATNNNNATC	2 cut(s)	651, 1956
BsaI	GGTCTC	1 cut(s)	972
BsaJI	CCNNGG	7 cut(s)	294, 369, 949, 1126, 1424, 1660, 1935
BsaXI	ACNNNNNCTCC	4 cut(s)	111, 141, 969, 999
Bsc4I	CCNNNNNNNGG	7 cut(s)	1127, 1358, 1643, 1661, 1693, 1750, 1987
Bse118I	RCCGGY	1 cut(s)	272
Bse1I	ACTGG	4 cut(s)	795, 961, 979, 1489
Bse21I	CCTNAGG	3 cut(s)	186, 1266, 2054
Bse3DI	GCAATG	1 cut(s)	1109
Bse8I	GATNNNNATC	2 cut(s)	651, 1956
BseBI	CCWGG	5 cut(s)	356, 722, 1128, 1562, 1638
BseDI	CCNNGG	7 cut(s)	294, 369, 949, 1126, 1424, 1660, 1935
BseJI	GATNNNNATC	2 cut(s)	651, 1956
BseLI	CCNNNNNNNGG	7 cut(s)	1127, 1358, 1643, 1661, 1693, 1750, 1987
BseMI	GCAATG	1 cut(s)	1109
BseMII	CTCAG	6 cut(s)	281, 480, 900, 902, 1280, 2068
BseNI	ACTGG	4 cut(s)	795, 961, 979, 1489
BseRI	GAGGAG	1 cut(s)	221
BseSI	GKGCMC	1 cut(s)	1801
BseXI	GCAGC	9 cut(s)	184, 322, 476, 871, 1015, 1198, 1360, 1405, 1889
BsgI	GTGCAG	1 cut(s)	1197
Bsh1236I	CGCG	4 cut(s)	92, 162, 230, 371
BshFI	GGCC	5 cut(s)	431, 700, 1193, 1636, 2046
BshNI	GGYRCC	1 cut(s)	181
BsiHKAI	GWGCWC	3 cut(s)	900, 1705, 1801
BsiHKCI	CYCGRG	2 cut(s)	44, 701
BsiSI	CCGG	1 cut(s)	273
BslFI	GGGAC	3 cut(s)	277, 1517, 1601
BslI	CCNNNNNNNGG	7 cut(s)	1127, 1358, 1643, 1661, 1693, 1750, 1987
BsmAI	GTCTC	2 cut(s)	401, 972
BsmFI	GGGAC	3 cut(s)	277, 1517, 1601
BsmI	GAATGC	2 cut(s)	1531, 1820
BsnI	GGCC	5 cut(s)	431, 700, 1193, 1636, 2046
Bso31I	GGTCTC	1 cut(s)	972
BsoBI	CYCGRG	2 cut(s)	44, 701
Bsp1286I	GDGCHC	3 cut(s)	900, 1705, 1801
Bsp19I	CCATGG	1 cut(s)	949
Bsp68I	TCGCGA	1 cut(s)	92
BspANI	GGCC	5 cut(s)	431, 700, 1193, 1636, 2046
BspCNI	CTCAG	6 cut(s)	280, 481, 901, 901, 1279, 2067
BspFNI	CGCG	4 cut(s)	92, 162, 230, 371
BspHI	TCATGA	1 cut(s)	787
BspLI	GGNNCC	5 cut(s)	158, 183, 1566, 1635, 1892
BspMAI	CTGCAG	2 cut(s)	1378, 1720
BspPI	GGATC	3 cut(s)	159, 785, 822
BspT107I	GGYRCC	1 cut(s)	181
BspTNI	GGTCTC	1 cut(s)	972
BsrBI	CCGCTC	1 cut(s)	1196
BsrDI	GCAATG	1 cut(s)	1109
BsrFI	RCCGGY	1 cut(s)	272
BsrI	ACTGG	4 cut(s)	795, 961, 979, 1489
BssAI	RCCGGY	1 cut(s)	272
BssECI	CCNNGG	7 cut(s)	294, 369, 949, 1126, 1424, 1660, 1935
BssT1I	CCWWGG	4 cut(s)	294, 949, 1424, 1935
Bst2UI	CCWGG	5 cut(s)	356, 722, 1128, 1562, 1638
Bst4CI	ACNGT	5 cut(s)	634, 696, 739, 1018, 1556
Bst6I	CTCTTC	2 cut(s)	303, 1730
BstAPI	GCANNNNNTGC	1 cut(s)	1163
BstBAI	YACGTR	1 cut(s)	1921
BstC8I	GCNNGC	2 cut(s)	177, 1391
BstDSI	CCRYGG	2 cut(s)	369, 949
BstENI	CCTNNNNNAGG	4 cut(s)	1356, 1641, 1659, 1691
BstFNI	CGCG	4 cut(s)	92, 162, 230, 371
BstH2I	RGCGCY	1 cut(s)	44
BstHHI	GCGC	2 cut(s)	43, 109
BstMAI	GTCTC	2 cut(s)	401, 972
BstMWI	GCNNNNNNNGC	7 cut(s)	181, 904, 1163, 1202, 1211, 1217, 1379
BstNI	CCWGG	5 cut(s)	356, 722, 1128, 1562, 1638
BstNSI	RCATGY	3 cut(s)	1161, 1220, 1888
BstSCI	CCNGG	5 cut(s)	354, 720, 1126, 1560, 1636
BstSFI	CTRYAG	5 cut(s)	1374, 1555, 1670, 1716, 2019
BstSLI	GKGCMC	1 cut(s)	1801
BstSNI	TACGTA	1 cut(s)	1921
BstUI	CGCG	4 cut(s)	92, 162, 230, 371
BstV1I	GCAGC	9 cut(s)	184, 322, 476, 871, 1015, 1198, 1360, 1405, 1889
BstV2I	GAAGAC	2 cut(s)	245, 1773
BstXI	CCANNNNNNTGG	4 cut(s)	301, 956, 1942, 2042
Bsu36I	CCTNAGG	3 cut(s)	186, 1266, 2054
BsuI	GTATCC	1 cut(s)	1904
BsuRI	GGCC	5 cut(s)	431, 700, 1193, 1636, 2046
BtgI	CCRYGG	2 cut(s)	369, 949
BtgZI	GCGATG	1 cut(s)	1080
BtsIMutI	CAGTG	2 cut(s)	692, 802
BtuMI	TCGCGA	1 cut(s)	92
Cac8I	GCNNGC	2 cut(s)	177, 1391
CciI	TCATGA	1 cut(s)	787
CfoI	GCGC	2 cut(s)	43, 109
Cfr10I	RCCGGY	1 cut(s)	272
Cfr13I	GGNCC	6 cut(s)	699, 1130, 1472, 1634, 1712, 1835
Cfr42I	CCGCGG	1 cut(s)	372
CseI	GACGC	2 cut(s)	219, 611
Csp6I	GTAC	2 cut(s)	1282, 1641
CviAII	CATG	8 cut(s)	788, 950, 983, 1158, 1217, 1448, 1627, 1885
CviQI	GTAC	2 cut(s)	1282, 1641
DrdI	GACNNNNNNGTC	1 cut(s)	1613
DseDI	GACNNNNNNGTC	1 cut(s)	1613
EaeI	YGGCCR	2 cut(s)	429, 2044
Eam1104I	CTCTTC	2 cut(s)	303, 1730
EarI	CTCTTC	2 cut(s)	303, 1730
EciI	GGCGGA	2 cut(s)	154, 320
Ecl136II	GAGCTC	1 cut(s)	898
Eco105I	TACGTA	1 cut(s)	1921
Eco130I	CCWWGG	4 cut(s)	294, 949, 1424, 1935
Eco24I	GRGCYC	1 cut(s)	900
Eco31I	GGTCTC	1 cut(s)	972
Eco47I	GGWCC	4 cut(s)	1130, 1472, 1712, 1835
Eco53kI	GAGCTC	1 cut(s)	898
Eco57I	CTGAAG	2 cut(s)	303, 419
Eco81I	CCTNAGG	3 cut(s)	186, 1266, 2054
Eco88I	CYCGRG	2 cut(s)	44, 701
EcoICRI	GAGCTC	1 cut(s)	898
EcoNI	CCTNNNNNAGG	4 cut(s)	1356, 1641, 1659, 1691
EcoO109I	RGGNCCY	1 cut(s)	1634
EcoRI	GAATTC	1 cut(s)	1334
EcoRII	CCWGG	5 cut(s)	354, 720, 1126, 1560, 1636
EcoT14I	CCWWGG	4 cut(s)	294, 949, 1424, 1935
EcoT22I	ATGCAT	1 cut(s)	662
EcoT38I	GRGCYC	1 cut(s)	900
ErhI	CCWWGG	4 cut(s)	294, 949, 1424, 1935
FaeI	CATG	8 cut(s)	791, 953, 986, 1161, 1220, 1451, 1630, 1888
FaqI	GGGAC	3 cut(s)	277, 1517, 1601
FatI	CATG	8 cut(s)	787, 949, 982, 1157, 1216, 1447, 1626, 1884
FauI	CCCGC	1 cut(s)	1542
FbaI	TGATCA	2 cut(s)	111, 652
FblI	GTMKAC	1 cut(s)	1998
FokI	GGATG	9 cut(s)	371, 389, 680, 737, 849, 932, 1289, 1531, 2054
FriOI	GRGCYC	1 cut(s)	900
FspBI	CTAG	5 cut(s)	243, 707, 1230, 1358, 1538
GlaI	GCGC	2 cut(s)	42, 108
GsuI	CTGGAG	4 cut(s)	53, 704, 996, 2018
HaeII	RGCGCY	1 cut(s)	44
HaeIII	GGCC	5 cut(s)	431, 700, 1193, 1636, 2046
HapII	CCGG	1 cut(s)	273
HgaI	GACGC	2 cut(s)	219, 611
HhaI	GCGC	2 cut(s)	43, 109
Hin1II	CATG	8 cut(s)	791, 953, 986, 1161, 1220, 1451, 1630, 1888
Hin6I	GCGC	2 cut(s)	41, 107
HinP1I	GCGC	2 cut(s)	41, 107
HincII	GTYRAC	2 cut(s)	592, 1046
HindII	GTYRAC	2 cut(s)	592, 1046
HinfI	GANTC	7 cut(s)	35, 62, 265, 763, 911, 1438, 2000
HpaII	CCGG	1 cut(s)	273
HphI	GGTGA	5 cut(s)	79, 656, 1254, 1413, 1940
Hpy166II	GTNNAC	6 cut(s)	486, 592, 744, 1046, 1799, 1999
Hpy188III	TCNNGA	6 cut(s)	91, 767, 788, 935, 1516, 2035
Hpy8I	GTNNAC	6 cut(s)	486, 592, 744, 1046, 1799, 1999
Hpy99I	CGWCG	3 cut(s)	97, 151, 235
HpyAV	CCTTC	8 cut(s)	278, 325, 679, 1183, 1267, 1611, 1691, 1826
HpyCH4III	ACNGT	5 cut(s)	634, 696, 739, 1018, 1556
HpyCH4IV	ACGT	1 cut(s)	1920
HpyF10VI	GCNNNNNNNGC	7 cut(s)	181, 904, 1163, 1202, 1211, 1217, 1379
HpySE526I	ACGT	1 cut(s)	1920
Hsp92II	CATG	8 cut(s)	791, 953, 986, 1161, 1220, 1451, 1630, 1888
HspAI	GCGC	2 cut(s)	41, 107
Ksp22I	TGATCA	2 cut(s)	111, 652
KspI	CCGCGG	1 cut(s)	372
LmnI	GCTCC	4 cut(s)	156, 903, 1570, 2037
Lsp1109I	GCAGC	9 cut(s)	184, 322, 476, 871, 1015, 1198, 1360, 1405, 1889
LweI	GCATC	1 cut(s)	1921
MaeI	CTAG	5 cut(s)	243, 707, 1230, 1358, 1538
MaeII	ACGT	1 cut(s)	1920
MaeIII	GTNAC	7 cut(s)	67, 548, 628, 799, 1400, 1419, 1450
MbiI	CCGCTC	1 cut(s)	1196
MboII	GAAGA	8 cut(s)	224, 250, 320, 412, 1034, 1534, 1717, 1778
MfeI	CAATTG	2 cut(s)	102, 1620
MhlI	GDGCHC	3 cut(s)	900, 1705, 1801
MlsI	TGGCCA	1 cut(s)	431
MluNI	TGGCCA	1 cut(s)	431
MlyI	GAGTC	5 cut(s)	44, 71, 259, 920, 1994
MmeI	TCCRAC	4 cut(s)	129, 1279, 1505, 2005
Mox20I	TGGCCA	1 cut(s)	431
Mph1103I	ATGCAT	1 cut(s)	662
MscI	TGGCCA	1 cut(s)	431
MseI	TTAA	5 cut(s)	168, 201, 570, 876, 1811
MslI	CAYNNNNRTG	4 cut(s)	80, 987, 1156, 1885
Msp20I	TGGCCA	1 cut(s)	431
MspA1I	CMGCKG	4 cut(s)	175, 281, 371, 758
MspI	CCGG	1 cut(s)	273
MspR9I	CCNGG	5 cut(s)	356, 722, 1128, 1562, 1638
MunI	CAATTG	2 cut(s)	102, 1620
Mva1269I	GAATGC	2 cut(s)	1531, 1820
MvaI	CCWGG	5 cut(s)	356, 722, 1128, 1562, 1638
MvnI	CGCG	4 cut(s)	92, 162, 230, 371
MwoI	GCNNNNNNNGC	7 cut(s)	181, 904, 1163, 1202, 1211, 1217, 1379
NcoI	CCATGG	1 cut(s)	949
NlaIII	CATG	8 cut(s)	791, 953, 986, 1161, 1220, 1451, 1630, 1888
NlaIV	GGNNCC	5 cut(s)	158, 183, 1566, 1635, 1892
NmuCI	GTSAC	3 cut(s)	67, 1419, 1450
NruI	TCGCGA	1 cut(s)	92
NsiI	ATGCAT	1 cut(s)	662
NspI	RCATGY	3 cut(s)	1161, 1220, 1888
OliI	CACNNNNGTG	1 cut(s)	80
PagI	TCATGA	1 cut(s)	787
PciI	ACATGT	1 cut(s)	1884
PctI	GAATGC	2 cut(s)	1531, 1820
PfeI	GAWTC	2 cut(s)	763, 1438
PfoI	TCCNGGA	1 cut(s)	720
PleI	GAGTC	5 cut(s)	43, 70, 259, 919, 1994
PpsI	GAGTC	5 cut(s)	43, 70, 259, 919, 1994
Ppu21I	YACGTR	1 cut(s)	1921
PscI	ACATGT	1 cut(s)	1884
Psp124BI	GAGCTC	1 cut(s)	900
Psp6I	CCWGG	5 cut(s)	354, 720, 1126, 1560, 1636
PspGI	CCWGG	5 cut(s)	354, 720, 1126, 1560, 1636
PspN4I	GGNNCC	5 cut(s)	158, 183, 1566, 1635, 1892
PspPI	GGNCC	6 cut(s)	699, 1130, 1472, 1634, 1712, 1835
PsrI	GAACNNNNNNTAC	2 cut(s)	946, 978
PstI	CTGCAG	2 cut(s)	1378, 1720
PvuII	CAGCTG	3 cut(s)	175, 281, 758
RruI	TCGCGA	1 cut(s)	92
RsaI	GTAC	2 cut(s)	1283, 1642
RsaNI	GTAC	2 cut(s)	1282, 1641
RseI	CAYNNNNRTG	4 cut(s)	80, 987, 1156, 1885
SacI	GAGCTC	1 cut(s)	900
SacII	CCGCGG	1 cut(s)	372
SaqAI	TTAA	5 cut(s)	168, 201, 570, 876, 1811
Sau96I	GGNCC	6 cut(s)	699, 1130, 1472, 1634, 1712, 1835
ScaI	AGTACT	1 cut(s)	1283
SchI	GAGTC	5 cut(s)	44, 71, 259, 920, 1994
ScrFI	CCNGG	5 cut(s)	356, 722, 1128, 1562, 1638
SduI	GDGCHC	3 cut(s)	900, 1705, 1801
SfaNI	GCATC	1 cut(s)	1921
SfcI	CTRYAG	5 cut(s)	1374, 1555, 1670, 1716, 2019
Sfr303I	CCGCGG	1 cut(s)	372
SgrBI	CCGCGG	1 cut(s)	372
SinI	GGWCC	4 cut(s)	1130, 1472, 1712, 1835
SmiMI	CAYNNNNRTG	4 cut(s)	80, 987, 1156, 1885
SnaBI	TACGTA	1 cut(s)	1921
SspMI	CTAG	5 cut(s)	243, 707, 1230, 1358, 1538
SstI	GAGCTC	1 cut(s)	900
StyD4I	CCNGG	5 cut(s)	354, 720, 1126, 1560, 1636
StyI	CCWWGG	4 cut(s)	294, 949, 1424, 1935
TaaI	ACNGT	5 cut(s)	634, 696, 739, 1018, 1556
TaiI	ACGT	1 cut(s)	1923
TaqI	TCGA	3 cut(s)	8, 824, 2003
TatI	WGTACW	1 cut(s)	1281
TauI	GCSGC	4 cut(s)	162, 371, 1117, 1196
TfiI	GAWTC	2 cut(s)	763, 1438
Tru1I	TTAA	5 cut(s)	168, 201, 570, 876, 1811
Tru9I	TTAA	5 cut(s)	168, 201, 570, 876, 1811
TscAI	CASTG	2 cut(s)	699, 802
TseFI	GTSAC	3 cut(s)	67, 1419, 1450
TseI	GCWGC	9 cut(s)	172, 335, 464, 884, 1028, 1211, 1373, 1393, 1877
Tsp45I	GTSAC	3 cut(s)	67, 1419, 1450
TspGWI	ACGGA	1 cut(s)	86
TspRI	CASTG	2 cut(s)	699, 802
VneI	GTGCAC	1 cut(s)	1797
VpaK11BI	GGWCC	4 cut(s)	1130, 1472, 1712, 1835
XagI	CCTNNNNNAGG	4 cut(s)	1356, 1641, 1659, 1691
XapI	RAATTY	2 cut(s)	938, 1334
XceI	RCATGY	3 cut(s)	1161, 1220, 1888
XmiI	GTMKAC	1 cut(s)	1998
XspI	CTAG	5 cut(s)	243, 707, 1230, 1358, 1538
ZrmI	AGTACT	1 cut(s)	1283
Zsp2I	ATGCAT	1 cut(s)	662

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.