Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0005981

Physical Location & Seq

Genomic Coordinates Forward (+)

10958597 .. 10964941

Gene Structure 6345 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001153

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGAGTTCGAATTCGGAATTGGTGCGGAAGCTGGAGTCGGCGCTTGGGGTTTCGTTGGGAGGCTCGGTGACGGACATGGCGGTGGTGATAGCGACGACTTCAATTGCGTTGATAATTGGGGTTTTGGTGGTGCTGTGGCGGAGATCGTCGGATCGGAAGAGTCGGGAGGTGAAGCAACTGGCGGTGCCCAAGGCGGTGCCGCTTCAGGAGGAGGAAGATGAGTTTGAGGTTGCGTCGGGGAAGACTAGGGTGACTATTTTCTATGGGACTCAGACCGGCACCGCTGAAGGTTTCGCCAAGAATTGGAAATGGAATGCTAGACAAATTTTAACTTTTGGACTTGTAGAGATCGAACTGATAAGAGATGATTATGCTCCGGAGGATGATAAATATGGAGAAAAACTGAAGAAAGAGACTATGGCATTCTTTATGTTGGCCACTTATGGAGATGGAGAGCCAACTGATAATGCAGCAAGATTTTACAAATGGTTTACTGAGGGAACAGATCGGGGTGTGTGGCTGGAACAACTAAGATATGGTGTTTTTGGTCTGGGTAACCGGCAGTACGAACATTTTAATAAGATAGGGAAAGTGGTTGACGAATTACTTAATGAACAAGGTGCAAAGCGTCTTGTTACCGTTGGCTTGGGTGATGATGATCAATGCATTGAGGATGATTTTTCTGCTTGGAGGGAAGCACTGTGGCCCGAGCTAGATCAATTACTCCAAGATGATACAAATAATGTGTCTACCCCATATACAGCTGTGATTCCTGAATATAGAGTTGTTATTCATGATCCCAGTATTACCTCTATTGAGGATCATTACTCTAATATGGCAAATGGGAATGCTTTTTTTGACATTCATCATCCTTGCAGAGTTAATGTTGCTGTTCAGAAAGAGCTTCATAAGCTTGCGTCCGATCGGTCTTGCATACATCTGGAATTTGACATCCATGCAACTGGTATTACATATGAAACCGGAGACCACGTGGGTGTTTATGCACATAATTGTGATGACACAGTTGAAGAAGCTGCAAAGTTGTTGGGTCAACCTTTAGATTTGCTGTTCTCCATTCACACTGACAATAATGATGGCACATCACTTGGAAGCTCATTGCCGCCTCCTTTTCCTGGTCCTTGCACACTCGAAACAGCATTGGCACGTTATGCTGATCTATTGAACCCACCTAAGAAGGCTGCTCTAATTGCTTTGGCTGCACATGCAGTTGAACCTAGTGAGGCAGAAAGACTCAAGTTCTTATCATCACCTCAGGGGAAGGATGAGTACTCAAAATGGGTTGTCGGAAGTCAGAGAAGTCTTCTAGAGGTACTGGCTGAATTCCCATCAGCAAAGCCTCCGCTAGGGGTGTTTTTTGCTGCAGTTGCCCCTCGCTTGCAGCCTCGTTACTATTCAATTTCGTCATCACCGAGGTTTGCCCCACATTGTGTTCATGTGACCTGTGCTTTGGTTTATGGTCCAACTCCGACTGGCAGAATTCACAAAGGAGTGGCTTCTTTCTGGATGAAGAATGCAGTTCCTCTAGAGAAAAGCCAGAACTGTAGCTGGGCTCCTATTTTTATTAGGCAATCTAATTTCAAGTTACCTGCTGACCATTTAGTCCCAATTGTCATGGTGGGGCCTGGTACAGGCTTAGCACCTTTCCGAGGATTTCTACAGGAAAGATTAGCCCTCAAAGAGGAAGGTGCTCAACTTGGTCCAGCACTTCTCTTTTTTGGTTGTAGAAATCGCCAAATGGATTTCATTTATGAAGATGAGTTGAATAATTTTGTGCAACAAGGTGCACTATCAGAGTTAATCGTTGCATTCTCACGGGAGGGACCATCAAAGGAGTATGTTCAACATAAGATGATGGAGAAAGCAGCGTACATGTGGAACCTAATATCGCAAGGGGGATACTTCTACGTATGTGGTGATGCCAAGGGTATGGCGAGAGATGTTCATCGGACGTTGCATACCATTGTCCAGCAAGAGGAAAAAGTAGACTCGTCAAAGGCAGAGTCTATAGTGAAAAAACTCCAGATGGATGGACGATACCTCAGGGATGTCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0003958 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006725 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009698 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0012505 GO:0016491 GO:0016651 GO:0016653 GO:0019748 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:0097305 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

692

Amino Acids

77.14

Weight (kDa)

5.54

Isoelectric Point (pI)

41.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	86 - 230	5.5e-29	Flavodoxin
FAD_binding_1	PF00667	286 - 508	1.5e-71	FAD binding domain
NAD_binding_1	PF00175	545 - 655	2.4e-15	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005981)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24520 AT4G24520
fragaria_vesca	FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 FvH4_5g34830
malus_domestica	MD08G1199100.v1.1 MD15G1386100.v1.1
prunus_persica	Prupe.1G532800_v2.0.a1 Prupe.1G532800_v2.0.a1 Prupe.1G532800_v2.0.a1
pyrus_communis	pycom08g17290 pycom15g34630
rosa_chinensis	RchiOBHm_Chr7g0235511
rosa_laevigata	RLG00000001153
rosa_multiflora	Rmu_sc0002617.1_g000018 Rmu_sc0002892.1_g000021 Rmu_sc0039003.1_g000003 Rmu_sc0042677.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225940
rosa_rugosa	Rorug07G0291400
rosa_samantha	Rh7AG446500 Rh7BG418200 Rh7CG466500 Rh7DG435200
rosa_wichuraiana	Rw7G037070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1619
Acc36I	ACCTGC	1 cut(s)	1615
AccB1I	GGYRCC	3 cut(s)	184, 196, 278
AccB7I	CCANNNNNTGG	1 cut(s)	303
AccI	GTMKAC	2 cut(s)	749, 2004
AccIII	TCCGGA	1 cut(s)	376
AciI	CCGC	9 cut(s)	25, 80, 139, 182, 194, 200, 282, 1121, 1361
AclWI	GGATC	3 cut(s)	159, 791, 828
AcoI	YGGCCR	1 cut(s)	435
AcsI	RAATTY	5 cut(s)	10, 324, 944, 1340, 1497
AcuI	CTGAAG	3 cut(s)	188, 306, 425
AcvI	CACGTG	1 cut(s)	991
AdeI	CACNNNGTG	1 cut(s)	1448
AfaI	GTAC	5 cut(s)	566, 1289, 1332, 1648, 1889
AfiI	CCNNNNNNNGG	7 cut(s)	303, 1133, 1364, 1649, 1667, 1699, 1993
AflIII	ACRYGT	1 cut(s)	1890
AgsI	TTSAA	8 cut(s)	102, 1028, 1183, 1232, 1416, 1600, 1783, 1862
AjnI	CCWGG	2 cut(s)	1132, 1642
AjuI	GAANNNNNNNTTGG	1 cut(s)	34
AleI	CACNNNNGTG	1 cut(s)	993
AluBI	AGCT	8 cut(s)	31, 712, 764, 904, 913, 1034, 1113, 1566
AluI	AGCT	8 cut(s)	31, 712, 764, 904, 913, 1034, 1113, 1566
Alw21I	GWGCWC	2 cut(s)	1711, 1807
Alw26I	GTCTC	2 cut(s)	407, 978
Alw44I	GTGCAC	1 cut(s)	1803
AlwI	GGATC	3 cut(s)	159, 791, 828
Ama87I	CYCGRG	1 cut(s)	707
Aor13HI	TCCGGA	1 cut(s)	376
AoxI	GGCC	3 cut(s)	435, 704, 1640
ApaLI	GTGCAC	1 cut(s)	1803
ApeKI	GCWGC	7 cut(s)	470, 1034, 1199, 1217, 1379, 1399, 1883
ApoI	RAATTY	5 cut(s)	10, 324, 944, 1340, 1497
ArsI	GACNNNNNNTTYG	6 cut(s)	731, 763, 1450, 1482, 2006, 2038
AspLEI	GCGC	1 cut(s)	43
AspS9I	GGNCC	6 cut(s)	705, 1136, 1478, 1640, 1718, 1841
AsuHPI	GGTGA	8 cut(s)	79, 97, 181, 262, 662, 1260, 1419, 1946
AsuII	TTCGAA	1 cut(s)	8
AvaI	CYCGRG	1 cut(s)	707
AvaII	GGWCC	4 cut(s)	1136, 1478, 1718, 1841
AxyI	CCTNAGG	2 cut(s)	1272, 2060
BaeGI	GKGCMC	2 cut(s)	189, 1807
BalI	TGGCCA	1 cut(s)	437
BanI	GGYRCC	3 cut(s)	184, 196, 278
BanII	GRGCYC	1 cut(s)	1573
BarI	GAAGNNNNNNTAC	2 cut(s)	1271, 1303
BbrPI	CACGTG	1 cut(s)	991
BbsI	GAAGAC	2 cut(s)	248, 1313
Bbv12I	GWGCWC	2 cut(s)	1711, 1807
BbvI	GCAGC	7 cut(s)	482, 1021, 1186, 1204, 1366, 1411, 1895
BccI	CCATC	7 cut(s)	443, 1088, 1354, 1852, 1867, 2038, 2042
BciT130I	CCWGG	2 cut(s)	1134, 1644
BciVI	GTATCC	1 cut(s)	1910
BclI	TGATCA	1 cut(s)	658
BcoDI	GTCTC	2 cut(s)	407, 978
BfaI	CTAG	7 cut(s)	246, 318, 713, 1236, 1325, 1364, 1544
BfmI	CTRYAG	4 cut(s)	1380, 1561, 1676, 2025
BfoI	RGCGCY	1 cut(s)	44
BfuAI	ACCTGC	1 cut(s)	1615
BfuI	GTATCC	1 cut(s)	1910
BisI	GCNGC	9 cut(s)	200, 471, 1035, 1121, 1200, 1218, 1380, 1400, 1884
BlpI	GCTNAGC	1 cut(s)	1654
BlsI	GCNGC	9 cut(s)	201, 472, 1036, 1122, 1201, 1219, 1381, 1401, 1885
BmcAI	AGTACT	1 cut(s)	1289
Bme1390I	CCNGG	2 cut(s)	1134, 1644
Bme18I	GGWCC	4 cut(s)	1136, 1478, 1718, 1841
BmeT110I	CYCGRG	1 cut(s)	707
BmgT120I	GGNCC	6 cut(s)	705, 1136, 1478, 1640, 1718, 1841
BmiI	GGNNCC	7 cut(s)	186, 198, 280, 1572, 1641, 1842, 1898
BmrFI	CCNGG	2 cut(s)	1134, 1644
BmrI	ACTGGG	1 cut(s)	795
BmsI	GCATC	1 cut(s)	1927
BmuI	ACTGGG	1 cut(s)	795
BpiI	GAAGAC	2 cut(s)	248, 1313
BpmI	CTGGAG	2 cut(s)	53, 2024
Bpu1102I	GCTNAGC	1 cut(s)	1654
Bpu14I	TTCGAA	1 cut(s)	8
BpuEI	CTTGAG	1 cut(s)	1238
BsaAI	YACGTR	2 cut(s)	991, 1927
BsaBI	GATNNNNATC	2 cut(s)	657, 1962
BsaI	GGTCTC	1 cut(s)	978
BsaJI	CCNNGG	4 cut(s)	189, 1430, 1666, 1941
BsaWI	WCCGGW	2 cut(s)	376, 980
BsaXI	ACNNNNNCTCC	4 cut(s)	51, 81, 975, 1005
Bsc4I	CCNNNNNNNGG	7 cut(s)	303, 1133, 1364, 1649, 1667, 1699, 1993
Bse118I	RCCGGY	2 cut(s)	275, 558
Bse1I	ACTGG	5 cut(s)	183, 801, 967, 1338, 1495
Bse21I	CCTNAGG	2 cut(s)	1272, 2060
Bse3DI	GCAATG	1 cut(s)	1115
Bse8I	GATNNNNATC	2 cut(s)	657, 1962
BseAI	TCCGGA	1 cut(s)	376
BseBI	CCWGG	2 cut(s)	1134, 1644
BseDI	CCNNGG	4 cut(s)	189, 1430, 1666, 1941
BseGI	GGATG	8 cut(s)	388, 679, 868, 951, 1288, 1530, 2053, 2071
BseJI	GATNNNNATC	2 cut(s)	657, 1962
BseLI	CCNNNNNNNGG	7 cut(s)	303, 1133, 1364, 1649, 1667, 1699, 1993
BseMI	GCAATG	1 cut(s)	1115
BseMII	CTCAG	4 cut(s)	284, 486, 1286, 2074
BseNI	ACTGG	5 cut(s)	183, 801, 967, 1338, 1495
BseRI	GAGGAG	1 cut(s)	224
BseSI	GKGCMC	2 cut(s)	189, 1807
BseXI	GCAGC	7 cut(s)	482, 1021, 1186, 1204, 1366, 1411, 1895
BseYI	CCCAGC	1 cut(s)	1566
BsgI	GTGCAG	1 cut(s)	1203
Bsh1285I	CGRYCG	1 cut(s)	925
BshFI	GGCC	3 cut(s)	437, 706, 1642
BshNI	GGYRCC	3 cut(s)	184, 196, 278
BsiEI	CGRYCG	1 cut(s)	925
BsiHKAI	GWGCWC	2 cut(s)	1711, 1807
BsiHKCI	CYCGRG	1 cut(s)	707
BsiSI	CCGG	4 cut(s)	276, 377, 559, 981
BslFI	GGGAC	3 cut(s)	280, 1607, 1854
BslI	CCNNNNNNNGG	7 cut(s)	303, 1133, 1364, 1649, 1667, 1699, 1993
BsmAI	GTCTC	2 cut(s)	407, 978
BsmFI	GGGAC	3 cut(s)	280, 1607, 1854
BsmI	GAATGC	5 cut(s)	319, 422, 853, 1537, 1826
BsnI	GGCC	3 cut(s)	437, 706, 1642
Bso31I	GGTCTC	1 cut(s)	978
BsoBI	CYCGRG	1 cut(s)	707
Bsp119I	TTCGAA	1 cut(s)	8
Bsp1286I	GDGCHC	4 cut(s)	189, 1573, 1711, 1807
Bsp13I	TCCGGA	1 cut(s)	376
Bsp1720I	GCTNAGC	1 cut(s)	1654
BspACI	CCGC	9 cut(s)	25, 80, 139, 182, 194, 200, 282, 1121, 1361
BspANI	GGCC	3 cut(s)	437, 706, 1642
BspCNI	CTCAG	4 cut(s)	283, 487, 1285, 2073
BspEI	TCCGGA	1 cut(s)	376
BspHI	TCATGA	1 cut(s)	793
BspLI	GGNNCC	7 cut(s)	186, 198, 280, 1572, 1641, 1842, 1898
BspMAI	CTGCAG	1 cut(s)	1384
BspMI	ACCTGC	1 cut(s)	1615
BspPI	GGATC	3 cut(s)	159, 791, 828
BspT104I	TTCGAA	1 cut(s)	8
BspT107I	GGYRCC	3 cut(s)	184, 196, 278
BspTNI	GGTCTC	1 cut(s)	978
BsrDI	GCAATG	1 cut(s)	1115
BsrFI	RCCGGY	2 cut(s)	275, 558
BsrI	ACTGG	5 cut(s)	183, 801, 967, 1338, 1495
BssAI	RCCGGY	2 cut(s)	275, 558
BssECI	CCNNGG	4 cut(s)	189, 1430, 1666, 1941
BssT1I	CCWWGG	2 cut(s)	189, 1941
Bst2UI	CCWGG	2 cut(s)	1134, 1644
Bst4CI	ACNGT	4 cut(s)	640, 702, 1024, 1562
Bst6I	CTCTTC	1 cut(s)	152
BstAPI	GCANNNNNTGC	1 cut(s)	1169
BstBAI	YACGTR	2 cut(s)	991, 1927
BstBI	TTCGAA	1 cut(s)	8
BstC8I	GCNNGC	2 cut(s)	915, 1397
BstDEI	CTNAG	7 cut(s)	270, 495, 530, 1191, 1272, 1654, 2060
BstEII	GGTNACC	1 cut(s)	554
BstENI	CCTNNNNNAGG	4 cut(s)	1362, 1647, 1665, 1697
BstF5I	GGATG	8 cut(s)	388, 679, 868, 951, 1288, 1530, 2053, 2071
BstH2I	RGCGCY	1 cut(s)	44
BstHHI	GCGC	1 cut(s)	43
BstMAI	GTCTC	2 cut(s)	407, 978
BstMCI	CGRYCG	1 cut(s)	925
BstMWI	GCNNNNNNNGC	6 cut(s)	910, 1169, 1208, 1217, 1223, 1385
BstNI	CCWGG	2 cut(s)	1134, 1644
BstNSI	RCATGY	2 cut(s)	1226, 1894
BstPI	GGTNACC	1 cut(s)	554
BstSCI	CCNGG	2 cut(s)	1132, 1642
BstSFI	CTRYAG	4 cut(s)	1380, 1561, 1676, 2025
BstSLI	GKGCMC	2 cut(s)	189, 1807
BstSNI	TACGTA	1 cut(s)	1927
BstV1I	GCAGC	7 cut(s)	482, 1021, 1186, 1204, 1366, 1411, 1895
BstV2I	GAAGAC	2 cut(s)	248, 1313
BstXI	CCANNNNNNTGG	3 cut(s)	962, 1948, 2048
Bsu36I	CCTNAGG	2 cut(s)	1272, 2060
BsuI	GTATCC	1 cut(s)	1910
BsuRI	GGCC	3 cut(s)	437, 706, 1642
BtsCI	GGATG	8 cut(s)	388, 679, 868, 951, 1288, 1530, 2053, 2071
BtsIMutI	CAGTG	2 cut(s)	698, 1080
BveI	ACCTGC	1 cut(s)	1615
Cac8I	GCNNGC	2 cut(s)	915, 1397
CciI	TCATGA	1 cut(s)	793
CfoI	GCGC	1 cut(s)	43
Cfr10I	RCCGGY	2 cut(s)	275, 558
Cfr13I	GGNCC	6 cut(s)	705, 1136, 1478, 1640, 1718, 1841
CseI	GACGC	3 cut(s)	222, 617, 906
Csp6I	GTAC	5 cut(s)	565, 1288, 1331, 1647, 1888
CviAII	CATG	7 cut(s)	76, 794, 956, 1223, 1454, 1633, 1891
CviQI	GTAC	5 cut(s)	565, 1288, 1331, 1647, 1888
DdeI	CTNAG	7 cut(s)	270, 495, 530, 1191, 1272, 1654, 2060
DraIII	CACNNNGTG	1 cut(s)	1448
DrdI	GACNNNNNNGTC	1 cut(s)	1619
DseDI	GACNNNNNNGTC	1 cut(s)	1619
EaeI	YGGCCR	1 cut(s)	435
Eam1104I	CTCTTC	1 cut(s)	152
EarI	CTCTTC	1 cut(s)	152
EciI	GGCGGA	1 cut(s)	154
Eco105I	TACGTA	1 cut(s)	1927
Eco130I	CCWWGG	2 cut(s)	189, 1941
Eco24I	GRGCYC	1 cut(s)	1573
Eco31I	GGTCTC	1 cut(s)	978
Eco47I	GGWCC	4 cut(s)	1136, 1478, 1718, 1841
Eco57I	CTGAAG	3 cut(s)	188, 306, 425
Eco72I	CACGTG	1 cut(s)	991
Eco81I	CCTNAGG	2 cut(s)	1272, 2060
Eco88I	CYCGRG	1 cut(s)	707
Eco91I	GGTNACC	1 cut(s)	554
EcoNI	CCTNNNNNAGG	4 cut(s)	1362, 1647, 1665, 1697
EcoO109I	RGGNCCY	1 cut(s)	1640
EcoO65I	GGTNACC	1 cut(s)	554
EcoRI	GAATTC	3 cut(s)	10, 1340, 1497
EcoRII	CCWGG	2 cut(s)	1132, 1642
EcoT14I	CCWWGG	2 cut(s)	189, 1941
EcoT22I	ATGCAT	1 cut(s)	668
EcoT38I	GRGCYC	1 cut(s)	1573
ErhI	CCWWGG	2 cut(s)	189, 1941
FaeI	CATG	7 cut(s)	79, 797, 959, 1226, 1457, 1636, 1894
FaqI	GGGAC	3 cut(s)	280, 1607, 1854
FatI	CATG	7 cut(s)	75, 793, 955, 1222, 1453, 1632, 1890
FauNDI	CATATG	1 cut(s)	973
FbaI	TGATCA	1 cut(s)	658
FblI	GTMKAC	2 cut(s)	749, 2004
Fnu4HI	GCNGC	9 cut(s)	200, 471, 1035, 1121, 1200, 1218, 1380, 1400, 1884
FokI	GGATG	7 cut(s)	395, 686, 855, 938, 1295, 1537, 2060
FriOI	GRGCYC	1 cut(s)	1573
Fsp4HI	GCNGC	9 cut(s)	200, 471, 1035, 1121, 1200, 1218, 1380, 1400, 1884
FspBI	CTAG	7 cut(s)	246, 318, 713, 1236, 1325, 1364, 1544
GlaI	GCGC	1 cut(s)	42
GluI	GCNGC	9 cut(s)	200, 471, 1035, 1121, 1200, 1218, 1380, 1400, 1884
GsaI	CCCAGC	1 cut(s)	1570
GsuI	CTGGAG	2 cut(s)	53, 2024
HaeII	RGCGCY	1 cut(s)	44
HaeIII	GGCC	3 cut(s)	437, 706, 1642
HapII	CCGG	4 cut(s)	276, 377, 559, 981
HgaI	GACGC	3 cut(s)	222, 617, 906
HhaI	GCGC	1 cut(s)	43
Hin1II	CATG	7 cut(s)	79, 797, 959, 1226, 1457, 1636, 1894
Hin6I	GCGC	1 cut(s)	41
HinP1I	GCGC	1 cut(s)	41
HincII	GTYRAC	2 cut(s)	598, 1052
HindII	GTYRAC	2 cut(s)	598, 1052
HindIII	AAGCTT	1 cut(s)	911
HinfI	GANTC	7 cut(s)	35, 160, 268, 769, 1251, 2006, 2021
HpaII	CCGG	4 cut(s)	276, 377, 559, 981
HphI	GGTGA	8 cut(s)	79, 97, 181, 262, 662, 1260, 1419, 1946
Hpy166II	GTNNAC	6 cut(s)	492, 598, 750, 1052, 1805, 2005
Hpy8I	GTNNAC	6 cut(s)	492, 598, 750, 1052, 1805, 2005
Hpy99I	CGWCG	3 cut(s)	97, 151, 238
HpyAV	CCTTC	4 cut(s)	281, 1189, 1273, 1697
HpyCH4III	ACNGT	4 cut(s)	640, 702, 1024, 1562
HpyCH4IV	ACGT	4 cut(s)	990, 1165, 1926, 1970
HpyF10VI	GCNNNNNNNGC	6 cut(s)	910, 1169, 1208, 1217, 1223, 1385
HpyF3I	CTNAG	7 cut(s)	270, 495, 530, 1191, 1272, 1654, 2060
HpySE526I	ACGT	4 cut(s)	990, 1165, 1926, 1970
Hsp92II	CATG	7 cut(s)	79, 797, 959, 1226, 1457, 1636, 1894
HspAI	GCGC	1 cut(s)	41
Kpn2I	TCCGGA	1 cut(s)	376
Ksp22I	TGATCA	1 cut(s)	658
LmnI	GCTCC	2 cut(s)	379, 1576
Lsp1109I	GCAGC	7 cut(s)	482, 1021, 1186, 1204, 1366, 1411, 1895
LweI	GCATC	1 cut(s)	1927
MaeI	CTAG	7 cut(s)	246, 318, 713, 1236, 1325, 1364, 1544
MaeII	ACGT	4 cut(s)	990, 1165, 1926, 1970
MaeIII	GTNAC	7 cut(s)	67, 250, 554, 634, 1406, 1456, 1602
MboII	GAAGA	8 cut(s)	169, 227, 253, 418, 1040, 1313, 1540, 1784
MfeI	CAATTG	2 cut(s)	102, 1626
MhlI	GDGCHC	4 cut(s)	189, 1573, 1711, 1807
MlsI	TGGCCA	1 cut(s)	437
MluNI	TGGCCA	1 cut(s)	437
MlyI	GAGTC	6 cut(s)	44, 169, 262, 1245, 2000, 2030
MmeI	TCCRAC	4 cut(s)	129, 1285, 1505, 1511
Mox20I	TGGCCA	1 cut(s)	437
Mph1103I	ATGCAT	1 cut(s)	668
MroI	TCCGGA	1 cut(s)	376
MscI	TGGCCA	1 cut(s)	437
MseI	TTAA	5 cut(s)	329, 576, 609, 882, 1817
MslI	CAYNNNNRTG	3 cut(s)	80, 993, 1011
Msp20I	TGGCCA	1 cut(s)	437
MspA1I	CMGCKG	2 cut(s)	284, 764
MspI	CCGG	4 cut(s)	276, 377, 559, 981
MspR9I	CCNGG	2 cut(s)	1134, 1644
MunI	CAATTG	2 cut(s)	102, 1626
Mva1269I	GAATGC	5 cut(s)	319, 422, 853, 1537, 1826
MvaI	CCWGG	2 cut(s)	1134, 1644
MwoI	GCNNNNNNNGC	6 cut(s)	910, 1169, 1208, 1217, 1223, 1385
NdeI	CATATG	1 cut(s)	973
NlaIII	CATG	7 cut(s)	79, 797, 959, 1226, 1457, 1636, 1894
NlaIV	GGNNCC	7 cut(s)	186, 198, 280, 1572, 1641, 1842, 1898
NmuCI	GTSAC	3 cut(s)	67, 250, 1456
NsiI	ATGCAT	1 cut(s)	668
NspI	RCATGY	2 cut(s)	1226, 1894
NspV	TTCGAA	1 cut(s)	8
OliI	CACNNNNGTG	1 cut(s)	993
PagI	TCATGA	1 cut(s)	793
PciI	ACATGT	1 cut(s)	1890
PcsI	WCGNNNNNNNCGW	1 cut(s)	1427
PctI	GAATGC	5 cut(s)	319, 422, 853, 1537, 1826
PfeI	GAWTC	1 cut(s)	769
PflMI	CCANNNNNTGG	1 cut(s)	303
PkrI	GCNGC	9 cut(s)	201, 472, 1036, 1122, 1201, 1219, 1381, 1401, 1885
Ple19I	CGATCG	1 cut(s)	925
PleI	GAGTC	6 cut(s)	43, 168, 262, 1245, 2000, 2029
PmaCI	CACGTG	1 cut(s)	991
PmlI	CACGTG	1 cut(s)	991
PpsI	GAGTC	6 cut(s)	43, 168, 262, 1245, 2000, 2029
Ppu21I	YACGTR	2 cut(s)	991, 1927
PscI	ACATGT	1 cut(s)	1890
Psp6I	CCWGG	2 cut(s)	1132, 1642
PspCI	CACGTG	1 cut(s)	991
PspEI	GGTNACC	1 cut(s)	554
PspFI	CCCAGC	1 cut(s)	1566
PspGI	CCWGG	2 cut(s)	1132, 1642
PspN4I	GGNNCC	7 cut(s)	186, 198, 280, 1572, 1641, 1842, 1898
PspPI	GGNCC	6 cut(s)	705, 1136, 1478, 1640, 1718, 1841
PstI	CTGCAG	1 cut(s)	1384
PvuI	CGATCG	1 cut(s)	925
PvuII	CAGCTG	1 cut(s)	764
RsaI	GTAC	5 cut(s)	566, 1289, 1332, 1648, 1889
RsaNI	GTAC	5 cut(s)	565, 1288, 1331, 1647, 1888
RseI	CAYNNNNRTG	3 cut(s)	80, 993, 1011
SaqAI	TTAA	5 cut(s)	329, 576, 609, 882, 1817
SatI	GCNGC	9 cut(s)	200, 471, 1035, 1121, 1200, 1218, 1380, 1400, 1884
Sau96I	GGNCC	6 cut(s)	705, 1136, 1478, 1640, 1718, 1841
ScaI	AGTACT	1 cut(s)	1289
SchI	GAGTC	6 cut(s)	44, 169, 262, 1245, 2000, 2030
ScrFI	CCNGG	2 cut(s)	1134, 1644
SduI	GDGCHC	4 cut(s)	189, 1573, 1711, 1807
SfaNI	GCATC	1 cut(s)	1927
SfcI	CTRYAG	4 cut(s)	1380, 1561, 1676, 2025
SfuI	TTCGAA	1 cut(s)	8
SinI	GGWCC	4 cut(s)	1136, 1478, 1718, 1841
SmiMI	CAYNNNNRTG	3 cut(s)	80, 993, 1011
SmlI	CTYRAG	1 cut(s)	1253
SmoI	CTYRAG	1 cut(s)	1253
SnaBI	TACGTA	1 cut(s)	1927
SsiI	CCGC	9 cut(s)	25, 80, 139, 182, 194, 200, 282, 1121, 1361
SspMI	CTAG	7 cut(s)	246, 318, 713, 1236, 1325, 1364, 1544
StyD4I	CCNGG	2 cut(s)	1132, 1642
StyI	CCWWGG	2 cut(s)	189, 1941
TaaI	ACNGT	4 cut(s)	640, 702, 1024, 1562
TaiI	ACGT	4 cut(s)	993, 1168, 1929, 1973
TaqI	TCGA	3 cut(s)	8, 351, 1149
TaqII	GACCGA	1 cut(s)	915
TatI	WGTACW	1 cut(s)	1287
TauI	GCSGC	2 cut(s)	202, 1123
TfiI	GAWTC	1 cut(s)	769
Tru1I	TTAA	5 cut(s)	329, 576, 609, 882, 1817
Tru9I	TTAA	5 cut(s)	329, 576, 609, 882, 1817
TscAI	CASTG	2 cut(s)	705, 1087
TseFI	GTSAC	3 cut(s)	67, 250, 1456
TseI	GCWGC	7 cut(s)	470, 1034, 1199, 1217, 1379, 1399, 1883
Tsp45I	GTSAC	3 cut(s)	67, 250, 1456
TspGWI	ACGGA	1 cut(s)	86
TspRI	CASTG	2 cut(s)	705, 1087
Van91I	CCANNNNNTGG	1 cut(s)	303
VneI	GTGCAC	1 cut(s)	1803
VpaK11BI	GGWCC	4 cut(s)	1136, 1478, 1718, 1841
XagI	CCTNNNNNAGG	4 cut(s)	1362, 1647, 1665, 1697
XapI	RAATTY	5 cut(s)	10, 324, 944, 1340, 1497
XbaI	TCTAGA	2 cut(s)	1324, 1543
XceI	RCATGY	2 cut(s)	1226, 1894
XmiI	GTMKAC	2 cut(s)	749, 2004
XspI	CTAG	7 cut(s)	246, 318, 713, 1236, 1325, 1364, 1544
ZrmI	AGTACT	1 cut(s)	1289
Zsp2I	ATGCAT	1 cut(s)	668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.