Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005981

Physical Location & Seq

Genomic Coordinates Forward (+)

9343130 .. 9349480

Gene Structure 6351 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00225940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGAGTTCGAATTCGGAATTGGTGCGGAAGCTGGAGTCGGCGCTTGGGGTTTCGTTGGGAGGCTCGGTGACGGACACGGCGGTGGTGATAGCGACGACTTCAATTGCGTTGATCATTGGGGTTTTGGTGGTGCTGTGGCGGAGATCGTCGGATCGGAAGAGTCGGGAGGTGAAGCAGCTGGCGGTGCCCAAGGCGGTGCCGCTTCAGGAGGAGGAAGATGAGTTTGAGGTTGCGTCGGGGAAGACTAGGGTGACTATTTTCTATGGGACTCAGACCGGCACCGCTGAAGGTTTCGCCAAGGCTTTGGCTGAAGAGATCAAGGCAAGATATGAGAAAGCTGTTGTCAAGGTTATTGACCTGGATGATTATGCTCCGGAGGATGATAAATATGGAGAAAAACTGAAGAAAGAGACTATGGCATTTTTTATGTTGGCCACTTATGGAGATGGAGAGCCAACTGATAATGCAGCAAGATTTTACAAATGGTTTACTGAGGGAGCAGATCGGGGTGTGTGGCTGGAACAACTAAGATATGGTGTTTTTGGTCTGGGTAACCGGCAGTATGAACATTTTAATAAGATAGGGAAAGTGGTTGACGAATTACTTAATGAACAAGGTGCAAAACGTCTTGTTACCGTTGGCTTAGGTGATGATGATCAATGCATTGAGGATGATTTTTCTGCTTGGAAGGAAGCACTGTGGCCCGAGCTAGATCAATTACTCCAAGATGATACAAATAATGTGTCTACCCCATATACAGCTGTGATTCCTGAATATAGAGTTGTTATTCATGATCCCAGTATCACTTCTTATGAGGATCATTACTCGAATATGGCAAACGGGAATGCTTCTTTTGACATTCATCATCCTTGCAGAGTTAATGTTGCTGTTCAGAAAGAGCTTCATAAGCCTGCGTCCGATCGGTCTTGCATACATCTGGAATTTGACATCCATGCAACTAGTATTACATATGAAACCGGAGACCACGTGGGTGTTTATGCAGATAATTGTGATGACACAGTTGAAGAAGCTGCAAAGTTGTTGGGTCAACCTTTAGATTTGCTGTTCTCCATTCACACCGACAATAATGATGGCACATCACTTGGAAGCTCATTGCCGCCTCCTTTTCCTGGTCCTTGCACACTCAAAACAGCATTGGCACATTATGCTGATCTATTGAACCCACCTAAGAAGGCTGCTCTAATTGCTTTGGCTGCACATGCAGTTGAACCTAGTGAGGCAGAAAGACTCAAGTTCTTATCATCACCTCAGGGGAAGGATGAGTACTCAAAATGGGTTGTTGGAAGTCAGAGAAGTCTTCTAGAGGTAATGGCTGAATTCCCATCAGCAAAGCCTCCACTAGGTGTGTTTTTTGCTGCAGTTGCCCCTCGCTTGCAGCCTCGTTACTATTCAATTTCGTCATCACCGAGGTTTGCCCCACATTGTGTTCATGTGACCTGTGCTTTGGTTTATGGTCCAACTCCGACTGGCAGAATTCACAAAGGAGTGGCTTCATTCTGGATGAAGAATGCAGTTCCTCTAGAGAAAAGCCAGAACTGTAGCTGGGCTCCTATTTTTATTAGGCAATCTAATTTCAAGTTACCTGCTGACCATTCAGTCCCAATTGTCATGGTGGGGCCTGGTACAGGCTTAGCACCTTTCCGAGGATTTCTACAGGAAAGATTAGCCCTCAAAGAGGAAGGTGCTGAACTTGGTCCTGCACTTCTCTTCTTTGGTTGTAGAAATCGCCAAATGGATTTCATTTATGAAGATGAGTTGAATAATTTTGTGCAACAAGGTGCACTATCAGAGTTAATCGTTGCATTCTCACGGGAGGGACCATCAAAGGAGTATGTTCAACATAAGATGATGGAGAAAGCAGCGTACATGTGGAACCTAATATCGCAAGGGGGATACTTCTACGTATGTGGTGATGCCAAGGGTATGGCGAGAGACGTTCATCGGACGTTGCATACCATTGTCCAGCAAGAGGAAAAAGTAGACTCGTCAAAGGCAGAGTCTATAGTGAAAAAACTCCAGATGGATGGTCGATACCTCAGGGATGTCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0003958 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006725 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009698 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0012505 GO:0016491 GO:0016651 GO:0016653 GO:0019748 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:0097305 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

690

Amino Acids

76.66

Weight (kDa)

5.45

Isoelectric Point (pI)

39.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	86 - 229	7.9e-34	Flavodoxin
FAD_binding_1	PF00667	284 - 507	8.2e-73	FAD binding domain
NAD_binding_1	PF00175	544 - 654	2.9e-15	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005981)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24520 AT4G24520
fragaria_vesca	FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 FvH4_5g34830
malus_domestica	MD08G1199100.v1.1 MD15G1386100.v1.1
prunus_persica	Prupe.1G532800_v2.0.a1 Prupe.1G532800_v2.0.a1 Prupe.1G532800_v2.0.a1
pyrus_communis	pycom08g17290 pycom15g34630
rosa_chinensis	RchiOBHm_Chr7g0235511
rosa_laevigata	RLG00000001153
rosa_multiflora	Rmu_sc0002617.1_g000018 Rmu_sc0002892.1_g000021 Rmu_sc0039003.1_g000003 Rmu_sc0042677.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225940
rosa_rugosa	Rorug07G0291400
rosa_samantha	Rh7AG446500 Rh7BG418200 Rh7CG466500 Rh7DG435200
rosa_wichuraiana	Rw7G037070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1616
Acc36I	ACCTGC	1 cut(s)	1612
AccB1I	GGYRCC	3 cut(s)	184, 196, 278
AccI	GTMKAC	2 cut(s)	746, 2001
AccIII	TCCGGA	1 cut(s)	373
AciI	CCGC	8 cut(s)	25, 80, 139, 182, 194, 200, 282, 1118
AclWI	GGATC	3 cut(s)	159, 788, 825
AcoI	YGGCCR	1 cut(s)	432
AcsI	RAATTY	4 cut(s)	10, 941, 1337, 1494
AcuI	CTGAAG	4 cut(s)	188, 306, 330, 422
AcvI	CACGTG	1 cut(s)	988
AdeI	CACNNNGTG	2 cut(s)	1364, 1445
AfaI	GTAC	3 cut(s)	1286, 1645, 1886
AfiI	CCNNNNNNNGG	6 cut(s)	1130, 1361, 1646, 1664, 1696, 1990
AflIII	ACRYGT	1 cut(s)	1887
AgsI	TTSAA	8 cut(s)	102, 1025, 1180, 1229, 1413, 1597, 1780, 1859
AhlI	ACTAGT	1 cut(s)	959
AjnI	CCWGG	3 cut(s)	357, 1129, 1639
AjuI	GAANNNNNNNTTGG	1 cut(s)	34
AleI	CACNNNNGTG	2 cut(s)	80, 990
AluBI	AGCT	9 cut(s)	31, 178, 338, 709, 761, 901, 1031, 1110, 1563
AluI	AGCT	9 cut(s)	31, 178, 338, 709, 761, 901, 1031, 1110, 1563
Alw21I	GWGCWC	1 cut(s)	1804
Alw26I	GTCTC	3 cut(s)	404, 975, 1947
Alw44I	GTGCAC	1 cut(s)	1800
AlwI	GGATC	3 cut(s)	159, 788, 825
Ama87I	CYCGRG	1 cut(s)	704
Aor13HI	TCCGGA	1 cut(s)	373
AoxI	GGCC	3 cut(s)	432, 701, 1637
ApaLI	GTGCAC	1 cut(s)	1800
ApeKI	GCWGC	8 cut(s)	175, 467, 1031, 1196, 1214, 1376, 1396, 1880
ApoI	RAATTY	4 cut(s)	10, 941, 1337, 1494
ArsI	GACNNNNNNTTYG	6 cut(s)	728, 760, 1447, 1479, 2003, 2035
AspLEI	GCGC	1 cut(s)	43
AspS9I	GGNCC	6 cut(s)	702, 1133, 1475, 1637, 1715, 1838
AsuHPI	GGTGA	8 cut(s)	79, 97, 181, 262, 659, 1257, 1416, 1943
AsuII	TTCGAA	1 cut(s)	8
AvaI	CYCGRG	1 cut(s)	704
AvaII	GGWCC	4 cut(s)	1133, 1475, 1715, 1838
AxyI	CCTNAGG	2 cut(s)	1269, 2057
BaeGI	GKGCMC	2 cut(s)	189, 1804
BalI	TGGCCA	1 cut(s)	434
BanI	GGYRCC	3 cut(s)	184, 196, 278
BanII	GRGCYC	1 cut(s)	1570
BarI	GAAGNNNNNNTAC	2 cut(s)	1268, 1300
BbrPI	CACGTG	1 cut(s)	988
BbsI	GAAGAC	2 cut(s)	248, 1310
Bbv12I	GWGCWC	1 cut(s)	1804
BbvI	GCAGC	8 cut(s)	187, 479, 1018, 1183, 1201, 1363, 1408, 1892
BccI	CCATC	7 cut(s)	440, 1085, 1351, 1849, 1864, 2035, 2039
BceAI	ACGGC	1 cut(s)	93
BciT130I	CCWGG	3 cut(s)	359, 1131, 1641
BciVI	GTATCC	1 cut(s)	1907
BclI	TGATCA	2 cut(s)	111, 655
BcoDI	GTCTC	3 cut(s)	404, 975, 1947
BcuI	ACTAGT	1 cut(s)	959
BfaI	CTAG	7 cut(s)	246, 710, 960, 1233, 1322, 1361, 1541
BfmI	CTRYAG	4 cut(s)	1377, 1558, 1673, 2022
BfoI	RGCGCY	1 cut(s)	44
BfuAI	ACCTGC	1 cut(s)	1612
BfuI	GTATCC	1 cut(s)	1907
BlpI	GCTNAGC	1 cut(s)	1651
BmcAI	AGTACT	1 cut(s)	1286
Bme1390I	CCNGG	3 cut(s)	359, 1131, 1641
Bme18I	GGWCC	4 cut(s)	1133, 1475, 1715, 1838
BmeT110I	CYCGRG	1 cut(s)	704
BmgT120I	GGNCC	6 cut(s)	702, 1133, 1475, 1637, 1715, 1838
BmiI	GGNNCC	7 cut(s)	186, 198, 280, 1569, 1638, 1839, 1895
BmrFI	CCNGG	3 cut(s)	359, 1131, 1641
BmrI	ACTGGG	1 cut(s)	792
BmsI	GCATC	1 cut(s)	1924
BmuI	ACTGGG	1 cut(s)	792
BpiI	GAAGAC	2 cut(s)	248, 1310
BpmI	CTGGAG	2 cut(s)	53, 2021
Bpu10I	CCTNAGC	1 cut(s)	643
Bpu1102I	GCTNAGC	1 cut(s)	1651
Bpu14I	TTCGAA	1 cut(s)	8
BpuEI	CTTGAG	1 cut(s)	1235
BsaAI	YACGTR	2 cut(s)	988, 1924
BsaBI	GATNNNNATC	1 cut(s)	654
BsaI	GGTCTC	1 cut(s)	975
BsaJI	CCNNGG	5 cut(s)	189, 297, 1427, 1663, 1938
BsaWI	WCCGGW	2 cut(s)	373, 977
BsaXI	ACNNNNNCTCC	4 cut(s)	51, 81, 972, 1002
Bsc4I	CCNNNNNNNGG	6 cut(s)	1130, 1361, 1646, 1664, 1696, 1990
Bse118I	RCCGGY	2 cut(s)	275, 555
Bse1I	ACTGG	2 cut(s)	798, 1492
Bse21I	CCTNAGG	2 cut(s)	1269, 2057
Bse3DI	GCAATG	1 cut(s)	1112
Bse8I	GATNNNNATC	1 cut(s)	654
BseAI	TCCGGA	1 cut(s)	373
BseBI	CCWGG	3 cut(s)	359, 1131, 1641
BseDI	CCNNGG	5 cut(s)	189, 297, 1427, 1663, 1938
BseGI	GGATG	9 cut(s)	367, 385, 676, 865, 948, 1285, 1527, 2050, 2068
BseJI	GATNNNNATC	1 cut(s)	654
BseLI	CCNNNNNNNGG	6 cut(s)	1130, 1361, 1646, 1664, 1696, 1990
BseMI	GCAATG	1 cut(s)	1112
BseMII	CTCAG	4 cut(s)	284, 483, 1283, 2071
BseNI	ACTGG	2 cut(s)	798, 1492
BseRI	GAGGAG	1 cut(s)	224
BseSI	GKGCMC	2 cut(s)	189, 1804
BseXI	GCAGC	8 cut(s)	187, 479, 1018, 1183, 1201, 1363, 1408, 1892
BseYI	CCCAGC	1 cut(s)	1563
BsgI	GTGCAG	2 cut(s)	1200, 1704
Bsh1285I	CGRYCG	1 cut(s)	922
BshFI	GGCC	3 cut(s)	434, 703, 1639
BshNI	GGYRCC	3 cut(s)	184, 196, 278
BsiEI	CGRYCG	1 cut(s)	922
BsiHKAI	GWGCWC	1 cut(s)	1804
BsiHKCI	CYCGRG	1 cut(s)	704
BsiSI	CCGG	4 cut(s)	276, 374, 556, 978
BslFI	GGGAC	3 cut(s)	280, 1604, 1851
BslI	CCNNNNNNNGG	6 cut(s)	1130, 1361, 1646, 1664, 1696, 1990
BsmAI	GTCTC	3 cut(s)	404, 975, 1947
BsmBI	CGTCTC	1 cut(s)	1947
BsmFI	GGGAC	3 cut(s)	280, 1604, 1851
BsmI	GAATGC	3 cut(s)	850, 1534, 1823
BsnI	GGCC	3 cut(s)	434, 703, 1639
Bso31I	GGTCTC	1 cut(s)	975
BsoBI	CYCGRG	1 cut(s)	704
Bsp119I	TTCGAA	1 cut(s)	8
Bsp1286I	GDGCHC	3 cut(s)	189, 1570, 1804
Bsp13I	TCCGGA	1 cut(s)	373
Bsp1720I	GCTNAGC	1 cut(s)	1651
BspACI	CCGC	8 cut(s)	25, 80, 139, 182, 194, 200, 282, 1118
BspANI	GGCC	3 cut(s)	434, 703, 1639
BspCNI	CTCAG	4 cut(s)	283, 484, 1282, 2070
BspEI	TCCGGA	1 cut(s)	373
BspHI	TCATGA	1 cut(s)	790
BspLI	GGNNCC	7 cut(s)	186, 198, 280, 1569, 1638, 1839, 1895
BspMAI	CTGCAG	1 cut(s)	1381
BspMI	ACCTGC	1 cut(s)	1612
BspPI	GGATC	3 cut(s)	159, 788, 825
BspT104I	TTCGAA	1 cut(s)	8
BspT107I	GGYRCC	3 cut(s)	184, 196, 278
BspTNI	GGTCTC	1 cut(s)	975
BsrDI	GCAATG	1 cut(s)	1112
BsrFI	RCCGGY	2 cut(s)	275, 555
BsrI	ACTGG	2 cut(s)	798, 1492
BssAI	RCCGGY	2 cut(s)	275, 555
BssECI	CCNNGG	5 cut(s)	189, 297, 1427, 1663, 1938
BssT1I	CCWWGG	3 cut(s)	189, 297, 1938
Bst2UI	CCWGG	3 cut(s)	359, 1131, 1641
Bst4CI	ACNGT	4 cut(s)	637, 699, 1021, 1559
Bst6I	CTCTTC	3 cut(s)	152, 306, 1733
BstAPI	GCANNNNNTGC	1 cut(s)	1166
BstBAI	YACGTR	2 cut(s)	988, 1924
BstBI	TTCGAA	1 cut(s)	8
BstC8I	GCNNGC	3 cut(s)	180, 912, 1394
BstDEI	CTNAG	8 cut(s)	270, 492, 527, 643, 1188, 1269, 1651, 2057
BstEII	GGTNACC	1 cut(s)	551
BstENI	CCTNNNNNAGG	4 cut(s)	1359, 1644, 1662, 1694
BstF5I	GGATG	9 cut(s)	367, 385, 676, 865, 948, 1285, 1527, 2050, 2068
BstH2I	RGCGCY	1 cut(s)	44
BstHHI	GCGC	1 cut(s)	43
BstMAI	GTCTC	3 cut(s)	404, 975, 1947
BstMCI	CGRYCG	1 cut(s)	922
BstMWI	GCNNNNNNNGC	7 cut(s)	184, 907, 1166, 1205, 1214, 1220, 1382
BstNI	CCWGG	3 cut(s)	359, 1131, 1641
BstNSI	RCATGY	2 cut(s)	1223, 1891
BstPI	GGTNACC	1 cut(s)	551
BstSCI	CCNGG	3 cut(s)	357, 1129, 1639
BstSFI	CTRYAG	4 cut(s)	1377, 1558, 1673, 2022
BstSLI	GKGCMC	2 cut(s)	189, 1804
BstSNI	TACGTA	1 cut(s)	1924
BstV1I	GCAGC	8 cut(s)	187, 479, 1018, 1183, 1201, 1363, 1408, 1892
BstV2I	GAAGAC	2 cut(s)	248, 1310
BstXI	CCANNNNNNTGG	3 cut(s)	304, 1945, 2045
Bsu36I	CCTNAGG	2 cut(s)	1269, 2057
BsuI	GTATCC	1 cut(s)	1907
BsuRI	GGCC	3 cut(s)	434, 703, 1639
BtsCI	GGATG	9 cut(s)	367, 385, 676, 865, 948, 1285, 1527, 2050, 2068
BtsIMutI	CAGTG	1 cut(s)	695
BveI	ACCTGC	1 cut(s)	1612
Cac8I	GCNNGC	3 cut(s)	180, 912, 1394
CciI	TCATGA	1 cut(s)	790
CfoI	GCGC	1 cut(s)	43
Cfr10I	RCCGGY	2 cut(s)	275, 555
Cfr13I	GGNCC	6 cut(s)	702, 1133, 1475, 1637, 1715, 1838
CseI	GACGC	2 cut(s)	222, 903
Csp6I	GTAC	3 cut(s)	1285, 1644, 1885
CviAII	CATG	6 cut(s)	791, 953, 1220, 1451, 1630, 1888
CviQI	GTAC	3 cut(s)	1285, 1644, 1885
DdeI	CTNAG	8 cut(s)	270, 492, 527, 643, 1188, 1269, 1651, 2057
DraIII	CACNNNGTG	2 cut(s)	1364, 1445
DrdI	GACNNNNNNGTC	1 cut(s)	1616
DseDI	GACNNNNNNGTC	1 cut(s)	1616
EaeI	YGGCCR	1 cut(s)	432
Eam1104I	CTCTTC	3 cut(s)	152, 306, 1733
EarI	CTCTTC	3 cut(s)	152, 306, 1733
EciI	GGCGGA	1 cut(s)	154
Eco105I	TACGTA	1 cut(s)	1924
Eco130I	CCWWGG	3 cut(s)	189, 297, 1938
Eco24I	GRGCYC	1 cut(s)	1570
Eco31I	GGTCTC	1 cut(s)	975
Eco47I	GGWCC	4 cut(s)	1133, 1475, 1715, 1838
Eco57I	CTGAAG	4 cut(s)	188, 306, 330, 422
Eco72I	CACGTG	1 cut(s)	988
Eco81I	CCTNAGG	2 cut(s)	1269, 2057
Eco88I	CYCGRG	1 cut(s)	704
Eco91I	GGTNACC	1 cut(s)	551
EcoNI	CCTNNNNNAGG	4 cut(s)	1359, 1644, 1662, 1694
EcoO109I	RGGNCCY	1 cut(s)	1637
EcoO65I	GGTNACC	1 cut(s)	551
EcoRI	GAATTC	3 cut(s)	10, 1337, 1494
EcoRII	CCWGG	3 cut(s)	357, 1129, 1639
EcoT14I	CCWWGG	3 cut(s)	189, 297, 1938
EcoT22I	ATGCAT	1 cut(s)	665
EcoT38I	GRGCYC	1 cut(s)	1570
ErhI	CCWWGG	3 cut(s)	189, 297, 1938
Esp3I	CGTCTC	1 cut(s)	1947
FaeI	CATG	6 cut(s)	794, 956, 1223, 1454, 1633, 1891
FaqI	GGGAC	3 cut(s)	280, 1604, 1851
FatI	CATG	6 cut(s)	790, 952, 1219, 1450, 1629, 1887
FauNDI	CATATG	1 cut(s)	970
FbaI	TGATCA	2 cut(s)	111, 655
FblI	GTMKAC	2 cut(s)	746, 2001
FokI	GGATG	8 cut(s)	374, 392, 683, 852, 935, 1292, 1534, 2057
FriOI	GRGCYC	1 cut(s)	1570
FspBI	CTAG	7 cut(s)	246, 710, 960, 1233, 1322, 1361, 1541
GlaI	GCGC	1 cut(s)	42
GsaI	CCCAGC	1 cut(s)	1567
GsuI	CTGGAG	2 cut(s)	53, 2021
HaeII	RGCGCY	1 cut(s)	44
HaeIII	GGCC	3 cut(s)	434, 703, 1639
HapII	CCGG	4 cut(s)	276, 374, 556, 978
HgaI	GACGC	2 cut(s)	222, 903
HhaI	GCGC	1 cut(s)	43
Hin1II	CATG	6 cut(s)	794, 956, 1223, 1454, 1633, 1891
Hin6I	GCGC	1 cut(s)	41
HinP1I	GCGC	1 cut(s)	41
HincII	GTYRAC	2 cut(s)	595, 1049
HindII	GTYRAC	2 cut(s)	595, 1049
HinfI	GANTC	7 cut(s)	35, 160, 268, 766, 1248, 2003, 2018
HpaII	CCGG	4 cut(s)	276, 374, 556, 978
HphI	GGTGA	8 cut(s)	79, 97, 181, 262, 659, 1257, 1416, 1943
Hpy166II	GTNNAC	6 cut(s)	489, 595, 747, 1049, 1802, 2002
Hpy8I	GTNNAC	6 cut(s)	489, 595, 747, 1049, 1802, 2002
Hpy99I	CGWCG	3 cut(s)	97, 151, 238
HpyAV	CCTTC	5 cut(s)	281, 682, 1186, 1270, 1694
HpyCH4III	ACNGT	4 cut(s)	637, 699, 1021, 1559
HpyCH4IV	ACGT	5 cut(s)	625, 987, 1923, 1956, 1967
HpyF10VI	GCNNNNNNNGC	7 cut(s)	184, 907, 1166, 1205, 1214, 1220, 1382
HpyF3I	CTNAG	8 cut(s)	270, 492, 527, 643, 1188, 1269, 1651, 2057
HpySE526I	ACGT	5 cut(s)	625, 987, 1923, 1956, 1967
Hsp92II	CATG	6 cut(s)	794, 956, 1223, 1454, 1633, 1891
HspAI	GCGC	1 cut(s)	41
Kpn2I	TCCGGA	1 cut(s)	373
Ksp22I	TGATCA	2 cut(s)	111, 655
LmnI	GCTCC	3 cut(s)	376, 497, 1573
Lsp1109I	GCAGC	8 cut(s)	187, 479, 1018, 1183, 1201, 1363, 1408, 1892
LweI	GCATC	1 cut(s)	1924
MaeI	CTAG	7 cut(s)	246, 710, 960, 1233, 1322, 1361, 1541
MaeII	ACGT	5 cut(s)	625, 987, 1923, 1956, 1967
MaeIII	GTNAC	7 cut(s)	67, 250, 551, 631, 1403, 1453, 1599
MfeI	CAATTG	2 cut(s)	102, 1623
MhlI	GDGCHC	3 cut(s)	189, 1570, 1804
MlsI	TGGCCA	1 cut(s)	434
MluNI	TGGCCA	1 cut(s)	434
MlyI	GAGTC	6 cut(s)	44, 169, 262, 1242, 1997, 2027
MmeI	TCCRAC	4 cut(s)	129, 1282, 1502, 1508
Mox20I	TGGCCA	1 cut(s)	434
Mph1103I	ATGCAT	1 cut(s)	665
MroI	TCCGGA	1 cut(s)	373
MscI	TGGCCA	1 cut(s)	434
MseI	TTAA	4 cut(s)	573, 606, 879, 1814
MslI	CAYNNNNRTG	2 cut(s)	80, 990
Msp20I	TGGCCA	1 cut(s)	434
MspA1I	CMGCKG	3 cut(s)	178, 284, 761
MspI	CCGG	4 cut(s)	276, 374, 556, 978
MspR9I	CCNGG	3 cut(s)	359, 1131, 1641
MunI	CAATTG	2 cut(s)	102, 1623
Mva1269I	GAATGC	3 cut(s)	850, 1534, 1823
MvaI	CCWGG	3 cut(s)	359, 1131, 1641
MwoI	GCNNNNNNNGC	7 cut(s)	184, 907, 1166, 1205, 1214, 1220, 1382
NdeI	CATATG	1 cut(s)	970
NlaIII	CATG	6 cut(s)	794, 956, 1223, 1454, 1633, 1891
NlaIV	GGNNCC	7 cut(s)	186, 198, 280, 1569, 1638, 1839, 1895
NmuCI	GTSAC	3 cut(s)	67, 250, 1453
NsiI	ATGCAT	1 cut(s)	665
NspI	RCATGY	2 cut(s)	1223, 1891
NspV	TTCGAA	1 cut(s)	8
OliI	CACNNNNGTG	2 cut(s)	80, 990
PagI	TCATGA	1 cut(s)	790
PciI	ACATGT	1 cut(s)	1887
PcsI	WCGNNNNNNNCGW	1 cut(s)	1424
PctI	GAATGC	3 cut(s)	850, 1534, 1823
PfeI	GAWTC	1 cut(s)	766
Ple19I	CGATCG	1 cut(s)	922
PleI	GAGTC	6 cut(s)	43, 168, 262, 1242, 1997, 2026
PmaCI	CACGTG	1 cut(s)	988
PmlI	CACGTG	1 cut(s)	988
PpsI	GAGTC	6 cut(s)	43, 168, 262, 1242, 1997, 2026
Ppu21I	YACGTR	2 cut(s)	988, 1924
PscI	ACATGT	1 cut(s)	1887
Psp6I	CCWGG	3 cut(s)	357, 1129, 1639
PspCI	CACGTG	1 cut(s)	988
PspEI	GGTNACC	1 cut(s)	551
PspFI	CCCAGC	1 cut(s)	1563
PspGI	CCWGG	3 cut(s)	357, 1129, 1639
PspN4I	GGNNCC	7 cut(s)	186, 198, 280, 1569, 1638, 1839, 1895
PspPI	GGNCC	6 cut(s)	702, 1133, 1475, 1637, 1715, 1838
PstI	CTGCAG	1 cut(s)	1381
PvuI	CGATCG	1 cut(s)	922
PvuII	CAGCTG	2 cut(s)	178, 761
RsaI	GTAC	3 cut(s)	1286, 1645, 1886
RsaNI	GTAC	3 cut(s)	1285, 1644, 1885
RseI	CAYNNNNRTG	2 cut(s)	80, 990
SaqAI	TTAA	4 cut(s)	573, 606, 879, 1814
Sau96I	GGNCC	6 cut(s)	702, 1133, 1475, 1637, 1715, 1838
ScaI	AGTACT	1 cut(s)	1286
SchI	GAGTC	6 cut(s)	44, 169, 262, 1242, 1997, 2027
ScrFI	CCNGG	3 cut(s)	359, 1131, 1641
SduI	GDGCHC	3 cut(s)	189, 1570, 1804
SfaNI	GCATC	1 cut(s)	1924
SfcI	CTRYAG	4 cut(s)	1377, 1558, 1673, 2022
SfuI	TTCGAA	1 cut(s)	8
SinI	GGWCC	4 cut(s)	1133, 1475, 1715, 1838
SmiMI	CAYNNNNRTG	2 cut(s)	80, 990
SmlI	CTYRAG	1 cut(s)	1250
SmoI	CTYRAG	1 cut(s)	1250
SnaBI	TACGTA	1 cut(s)	1924
SpeI	ACTAGT	1 cut(s)	959
SsiI	CCGC	8 cut(s)	25, 80, 139, 182, 194, 200, 282, 1118
SspMI	CTAG	7 cut(s)	246, 710, 960, 1233, 1322, 1361, 1541
StyD4I	CCNGG	3 cut(s)	357, 1129, 1639
StyI	CCWWGG	3 cut(s)	189, 297, 1938
TaaI	ACNGT	4 cut(s)	637, 699, 1021, 1559
TaiI	ACGT	5 cut(s)	628, 990, 1926, 1959, 1970
TaqI	TCGA	3 cut(s)	8, 827, 2050
TaqII	GACCGA	1 cut(s)	912
TatI	WGTACW	1 cut(s)	1284
TauI	GCSGC	2 cut(s)	202, 1120
TfiI	GAWTC	1 cut(s)	766
Tru1I	TTAA	4 cut(s)	573, 606, 879, 1814
Tru9I	TTAA	4 cut(s)	573, 606, 879, 1814
TscAI	CASTG	1 cut(s)	702
TseFI	GTSAC	3 cut(s)	67, 250, 1453
TseI	GCWGC	8 cut(s)	175, 467, 1031, 1196, 1214, 1376, 1396, 1880
Tsp45I	GTSAC	3 cut(s)	67, 250, 1453
TspGWI	ACGGA	1 cut(s)	86
TspRI	CASTG	1 cut(s)	702
VneI	GTGCAC	1 cut(s)	1800
VpaK11BI	GGWCC	4 cut(s)	1133, 1475, 1715, 1838
XagI	CCTNNNNNAGG	4 cut(s)	1359, 1644, 1662, 1694
XapI	RAATTY	4 cut(s)	10, 941, 1337, 1494
XbaI	TCTAGA	2 cut(s)	1321, 1540
XceI	RCATGY	2 cut(s)	1223, 1891
XmiI	GTMKAC	2 cut(s)	746, 2001
XspI	CTAG	7 cut(s)	246, 710, 960, 1233, 1322, 1361, 1541
ZrmI	AGTACT	1 cut(s)	1286
Zsp2I	ATGCAT	1 cut(s)	665

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.