belongs to the flavoprotein pyridine nucleotide cytochrome reductase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G24520 AT4G24520 |
| fragaria_vesca | FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 FvH4_5g34830 |
| malus_domestica | MD08G1199100.v1.1 MD15G1386100.v1.1 |
| prunus_persica | Prupe.1G532800_v2.0.a1 Prupe.1G532800_v2.0.a1 Prupe.1G532800_v2.0.a1 |
| pyrus_communis | pycom08g17290 pycom15g34630 |
| rosa_chinensis | RchiOBHm_Chr7g0235511 |
| rosa_laevigata | RLG00000001153 |
| rosa_multiflora | Rmu_sc0002617.1_g000018 Rmu_sc0002892.1_g000021 Rmu_sc0039003.1_g000003 Rmu_sc0042677.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00225940 |
| rosa_rugosa | Rorug07G0291400 |
| rosa_samantha | Rh7AG446500 Rh7BG418200 Rh7CG466500 Rh7DG435200 |
| rosa_wichuraiana | Rw7G037070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1192 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 710 |
| AccBSI | CCGCTC | 1 cut(s) | 504 |
| AciI | CCGC | 5 cut(s) | 320, 502, 698, 727, 1328 |
| AclWI | GGATC | 1 cut(s) | 1185 |
| AcoI | YGGCCR | 1 cut(s) | 6 |
| AcsI | RAATTY | 3 cut(s) | 313, 833, 1074 |
| AcuI | CTGAAG | 1 cut(s) | 1180 |
| AdeI | CACNNNGTG | 1 cut(s) | 944 |
| AfaI | GTAC | 2 cut(s) | 866, 1226 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 710, 941, 1227, 1245, 1276, 1277, 1334 |
| AgsI | TTSAA | 7 cut(s) | 95, 148, 473, 605, 760, 809, 1177 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 403 |
| AjiI | CACGTC | 1 cut(s) | 678 |
| AjnI | CCWGG | 2 cut(s) | 709, 1220 |
| AluBI | AGCT | 6 cut(s) | 87, 481, 611, 690, 1143, 1180 |
| AluI | AGCT | 6 cut(s) | 87, 481, 611, 690, 1143, 1180 |
| Alw21I | GWGCWC | 1 cut(s) | 1289 |
| Alw26I | GTCTC | 3 cut(s) | 435, 555, 684 |
| AlwI | GGATC | 1 cut(s) | 1185 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1143 |
| AoxI | GGCC | 6 cut(s) | 6, 272, 625, 1218, 1267, 1296 |
| ApeKI | GCWGC | 5 cut(s) | 41, 611, 776, 794, 956 |
| ApoI | RAATTY | 3 cut(s) | 313, 833, 1074 |
| AspS9I | GGNCC | 6 cut(s) | 625, 713, 1055, 1218, 1268, 1296 |
| AsuHPI | GGTGA | 4 cut(s) | 233, 434, 837, 996 |
| AvaII | GGWCC | 2 cut(s) | 713, 1055 |
| AxyI | CCTNAGG | 1 cut(s) | 849 |
| BalI | TGGCCA | 1 cut(s) | 8 |
| BanII | GRGCYC | 1 cut(s) | 1150 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 848, 880 |
| Bbv12I | GWGCWC | 1 cut(s) | 1289 |
| BbvI | GCAGC | 5 cut(s) | 53, 598, 763, 781, 943 |
| BccI | CCATC | 7 cut(s) | 14, 453, 522, 665, 931, 1029, 1259 |
| BceAI | ACGGC | 2 cut(s) | 323, 788 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 236, 270 |
| BciT130I | CCWGG | 2 cut(s) | 711, 1222 |
| BclI | TGATCA | 2 cut(s) | 172, 229 |
| BcoDI | GTCTC | 3 cut(s) | 435, 555, 684 |
| BfaI | CTAG | 2 cut(s) | 375, 1121 |
| BfmI | CTRYAG | 2 cut(s) | 957, 1254 |
| BfuAI | ACCTGC | 1 cut(s) | 1192 |
| BglII | AGATCT | 1 cut(s) | 283 |
| BisI | GCNGC | 6 cut(s) | 42, 321, 612, 777, 795, 957 |
| BlsI | GCNGC | 6 cut(s) | 43, 322, 613, 778, 796, 958 |
| BmcAI | AGTACT | 1 cut(s) | 866 |
| Bme1390I | CCNGG | 2 cut(s) | 711, 1222 |
| Bme18I | GGWCC | 2 cut(s) | 713, 1055 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 403 |
| BmgBI | CACGTC | 1 cut(s) | 678 |
| BmgT120I | GGNCC | 6 cut(s) | 625, 713, 1055, 1218, 1268, 1296 |
| BmiI | GGNNCC | 3 cut(s) | 27, 1149, 1219 |
| BmrFI | CCNGG | 2 cut(s) | 711, 1222 |
| BmsI | GCATC | 1 cut(s) | 519 |
| BpmI | CTGGAG | 2 cut(s) | 539, 579 |
| Bpu10I | CCTNAGC | 1 cut(s) | 217 |
| BsaBI | GATNNNNATC | 1 cut(s) | 228 |
| BsaI | GGTCTC | 1 cut(s) | 555 |
| BsaJI | CCNNGG | 2 cut(s) | 767, 1244 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 552, 582 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 710, 941, 1227, 1245, 1276, 1277, 1334 |
| Bse1I | ACTGG | 3 cut(s) | 544, 562, 1072 |
| Bse21I | CCTNAGG | 1 cut(s) | 849 |
| Bse8I | GATNNNNATC | 1 cut(s) | 228 |
| BseBI | CCWGG | 2 cut(s) | 711, 1222 |
| BseDI | CCNNGG | 2 cut(s) | 767, 1244 |
| BseGI | GGATG | 5 cut(s) | 445, 510, 865, 1107, 1270 |
| BseJI | GATNNNNATC | 1 cut(s) | 228 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 710, 941, 1227, 1245, 1276, 1277, 1334 |
| BseMII | CTCAG | 4 cut(s) | 267, 483, 863, 906 |
| BseNI | ACTGG | 3 cut(s) | 544, 562, 1072 |
| BseXI | GCAGC | 5 cut(s) | 53, 598, 763, 781, 943 |
| BseYI | CCCAGC | 1 cut(s) | 1143 |
| BsgI | GTGCAG | 2 cut(s) | 780, 1285 |
| BshFI | GGCC | 6 cut(s) | 8, 274, 627, 1220, 1269, 1298 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1289 |
| BslFI | GGGAC | 1 cut(s) | 1185 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 710, 941, 1227, 1245, 1276, 1277, 1334 |
| BsmAI | GTCTC | 3 cut(s) | 435, 555, 684 |
| BsmBI | CGTCTC | 2 cut(s) | 435, 684 |
| BsmFI | GGGAC | 1 cut(s) | 1185 |
| BsmI | GAATGC | 2 cut(s) | 430, 1114 |
| BsnI | GGCC | 6 cut(s) | 8, 274, 627, 1220, 1269, 1298 |
| Bso31I | GGTCTC | 1 cut(s) | 555 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1150, 1289 |
| Bsp143I | GATC | 5 cut(s) | 172, 229, 283, 751, 1190 |
| BspACI | CCGC | 5 cut(s) | 320, 502, 698, 727, 1328 |
| BspANI | GGCC | 6 cut(s) | 8, 274, 627, 1220, 1269, 1298 |
| BspCNI | CTCAG | 4 cut(s) | 268, 484, 862, 907 |
| BspHI | TCATGA | 1 cut(s) | 367 |
| BspLI | GGNNCC | 3 cut(s) | 27, 1149, 1219 |
| BspMAI | CTGCAG | 1 cut(s) | 961 |
| BspMI | ACCTGC | 1 cut(s) | 1192 |
| BspPI | GGATC | 1 cut(s) | 1185 |
| BspTNI | GGTCTC | 1 cut(s) | 555 |
| BsrBI | CCGCTC | 1 cut(s) | 504 |
| BsrI | ACTGG | 3 cut(s) | 544, 562, 1072 |
| BssECI | CCNNGG | 2 cut(s) | 767, 1244 |
| BssMI | GATC | 5 cut(s) | 172, 229, 283, 751, 1190 |
| Bst2UI | CCWGG | 2 cut(s) | 711, 1222 |
| Bst4CI | ACNGT | 4 cut(s) | 401, 601, 724, 1139 |
| Bst6I | CTCTTC | 1 cut(s) | 1314 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 746 |
| BstC8I | GCNNGC | 2 cut(s) | 89, 1300 |
| BstDEI | CTNAG | 6 cut(s) | 179, 217, 276, 492, 849, 915 |
| BstEII | GGTNACC | 1 cut(s) | 125 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1225, 1243 |
| BstF5I | GGATG | 5 cut(s) | 445, 510, 865, 1107, 1270 |
| BstKTI | GATC | 5 cut(s) | 175, 232, 286, 754, 1193 |
| BstMAI | GTCTC | 3 cut(s) | 435, 555, 684 |
| BstMBI | GATC | 5 cut(s) | 172, 229, 283, 751, 1190 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 726, 746, 785, 794, 800, 962, 1327 |
| BstNI | CCWGG | 2 cut(s) | 711, 1222 |
| BstNSI | RCATGY | 1 cut(s) | 803 |
| BstPI | GGTNACC | 1 cut(s) | 125 |
| BstSCI | CCNGG | 2 cut(s) | 709, 1220 |
| BstSFI | CTRYAG | 2 cut(s) | 957, 1254 |
| BstV1I | GCAGC | 5 cut(s) | 53, 598, 763, 781, 943 |
| BstX2I | RGATCY | 1 cut(s) | 283 |
| BstYI | RGATCY | 1 cut(s) | 283 |
| Bsu36I | CCTNAGG | 1 cut(s) | 849 |
| BsuRI | GGCC | 6 cut(s) | 8, 274, 627, 1220, 1269, 1298 |
| BtrI | CACGTC | 1 cut(s) | 678 |
| BtsCI | GGATG | 5 cut(s) | 445, 510, 865, 1107, 1270 |
| BtsI | GCAGTG | 1 cut(s) | 729 |
| BtsIMutI | CAGTG | 1 cut(s) | 729 |
| BveI | ACCTGC | 1 cut(s) | 1192 |
| Cac8I | GCNNGC | 2 cut(s) | 89, 1300 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1143 |
| CciI | TCATGA | 1 cut(s) | 367 |
| Cfr13I | GGNCC | 6 cut(s) | 625, 713, 1055, 1218, 1268, 1296 |
| CseI | GACGC | 2 cut(s) | 188, 417 |
| Csp6I | GTAC | 2 cut(s) | 865, 1225 |
| CviAII | CATG | 6 cut(s) | 368, 566, 717, 800, 1031, 1211 |
| CviQI | GTAC | 2 cut(s) | 865, 1225 |
| DdeI | CTNAG | 6 cut(s) | 179, 217, 276, 492, 849, 915 |
| DpnI | GATC | 5 cut(s) | 174, 231, 285, 753, 1192 |
| DpnII | GATC | 5 cut(s) | 172, 229, 283, 751, 1190 |
| DraIII | CACNNNGTG | 1 cut(s) | 944 |
| DriI | GACNNNNNGTC | 1 cut(s) | 403 |
| EaeI | YGGCCR | 1 cut(s) | 6 |
| Eam1104I | CTCTTC | 1 cut(s) | 1314 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 403 |
| EarI | CTCTTC | 1 cut(s) | 1314 |
| Eco24I | GRGCYC | 1 cut(s) | 1150 |
| Eco31I | GGTCTC | 1 cut(s) | 555 |
| Eco32I | GATATC | 1 cut(s) | 529 |
| Eco47I | GGWCC | 2 cut(s) | 713, 1055 |
| Eco57I | CTGAAG | 1 cut(s) | 1180 |
| Eco81I | CCTNAGG | 1 cut(s) | 849 |
| Eco91I | GGTNACC | 1 cut(s) | 125 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1225, 1243 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1218, 1296 |
| EcoO65I | GGTNACC | 1 cut(s) | 125 |
| EcoRI | GAATTC | 1 cut(s) | 1074 |
| EcoRII | CCWGG | 2 cut(s) | 709, 1220 |
| EcoRV | GATATC | 1 cut(s) | 529 |
| EcoT22I | ATGCAT | 1 cut(s) | 239 |
| EcoT38I | GRGCYC | 1 cut(s) | 1150 |
| Esp3I | CGTCTC | 2 cut(s) | 435, 684 |
| FaeI | CATG | 6 cut(s) | 371, 569, 720, 803, 1034, 1214 |
| FaqI | GGGAC | 1 cut(s) | 1185 |
| FatI | CATG | 6 cut(s) | 367, 565, 716, 799, 1030, 1210 |
| FauNDI | CATATG | 1 cut(s) | 550 |
| FbaI | TGATCA | 2 cut(s) | 172, 229 |
| Fnu4HI | GCNGC | 6 cut(s) | 42, 321, 612, 777, 795, 957 |
| FokI | GGATG | 5 cut(s) | 432, 497, 872, 1114, 1277 |
| FriOI | GRGCYC | 1 cut(s) | 1150 |
| Fsp4HI | GCNGC | 6 cut(s) | 42, 321, 612, 777, 795, 957 |
| FspBI | CTAG | 2 cut(s) | 375, 1121 |
| GluI | GCNGC | 6 cut(s) | 42, 321, 612, 777, 795, 957 |
| GsaI | CCCAGC | 1 cut(s) | 1147 |
| GsuI | CTGGAG | 2 cut(s) | 539, 579 |
| HaeIII | GGCC | 6 cut(s) | 8, 274, 627, 1220, 1269, 1298 |
| HgaI | GACGC | 2 cut(s) | 188, 417 |
| Hin1II | CATG | 6 cut(s) | 371, 569, 720, 803, 1034, 1214 |
| HinfI | GANTC | 2 cut(s) | 263, 494 |
| HphI | GGTGA | 4 cut(s) | 233, 434, 837, 996 |
| Hpy166II | GTNNAC | 1 cut(s) | 63 |
| Hpy188I | TCNGA | 4 cut(s) | 296, 499, 771, 1245 |
| Hpy188III | TCNNGA | 7 cut(s) | 347, 368, 434, 518, 534, 1099, 1121 |
| Hpy8I | GTNNAC | 1 cut(s) | 63 |
| HpyAV | CCTTC | 4 cut(s) | 182, 766, 850, 1204 |
| HpyCH4III | ACNGT | 4 cut(s) | 401, 601, 724, 1139 |
| HpyCH4IV | ACGT | 2 cut(s) | 677, 742 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 726, 746, 785, 794, 800, 962, 1327 |
| HpyF3I | CTNAG | 6 cut(s) | 179, 217, 276, 492, 849, 915 |
| HpySE526I | ACGT | 2 cut(s) | 677, 742 |
| Hsp92II | CATG | 6 cut(s) | 371, 569, 720, 803, 1034, 1214 |
| Ksp22I | TGATCA | 2 cut(s) | 172, 229 |
| Kzo9I | GATC | 5 cut(s) | 172, 229, 283, 751, 1190 |
| LmnI | GCTCC | 2 cut(s) | 25, 1153 |
| Lsp1109I | GCAGC | 5 cut(s) | 53, 598, 763, 781, 943 |
| LweI | GCATC | 1 cut(s) | 519 |
| MaeI | CTAG | 2 cut(s) | 375, 1121 |
| MaeII | ACGT | 2 cut(s) | 677, 742 |
| MaeIII | GTNAC | 4 cut(s) | 125, 382, 983, 1033 |
| MalI | GATC | 5 cut(s) | 174, 231, 285, 753, 1192 |
| MbiI | CCGCTC | 1 cut(s) | 504 |
| MboI | GATC | 5 cut(s) | 172, 229, 283, 751, 1190 |
| MboII | GAAGA | 6 cut(s) | 197, 314, 617, 993, 1117, 1301 |
| MflI | RGATCY | 1 cut(s) | 283 |
| MhlI | GDGCHC | 2 cut(s) | 1150, 1289 |
| MlsI | TGGCCA | 1 cut(s) | 8 |
| MluCI | AATT | 7 cut(s) | 313, 342, 586, 833, 1074, 1171, 1290 |
| MluNI | TGGCCA | 1 cut(s) | 8 |
| MlyI | GAGTC | 1 cut(s) | 503 |
| MmeI | TCCRAC | 2 cut(s) | 862, 1082 |
| Mox20I | TGGCCA | 1 cut(s) | 8 |
| Mph1103I | ATGCAT | 1 cut(s) | 239 |
| MscI | TGGCCA | 1 cut(s) | 8 |
| MseI | TTAA | 2 cut(s) | 459, 831 |
| MslI | CAYNNNNRTG | 1 cut(s) | 570 |
| Msp20I | TGGCCA | 1 cut(s) | 8 |
| MspR9I | CCNGG | 2 cut(s) | 711, 1222 |
| Mva1269I | GAATGC | 2 cut(s) | 430, 1114 |
| MvaI | CCWGG | 2 cut(s) | 711, 1222 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 726, 746, 785, 794, 800, 962, 1327 |
| NdeI | CATATG | 1 cut(s) | 550 |
| NdeII | GATC | 5 cut(s) | 172, 229, 283, 751, 1190 |
| NlaIII | CATG | 6 cut(s) | 371, 569, 720, 803, 1034, 1214 |
| NlaIV | GGNNCC | 3 cut(s) | 27, 1149, 1219 |
| NsiI | ATGCAT | 1 cut(s) | 239 |
| NspI | RCATGY | 1 cut(s) | 803 |
| PagI | TCATGA | 1 cut(s) | 367 |
| PctI | GAATGC | 2 cut(s) | 430, 1114 |
| PfeI | GAWTC | 1 cut(s) | 263 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 710 |
| PkrI | GCNGC | 6 cut(s) | 43, 322, 613, 778, 796, 958 |
| PleI | GAGTC | 1 cut(s) | 502 |
| PpsI | GAGTC | 1 cut(s) | 502 |
| Psp6I | CCWGG | 2 cut(s) | 709, 1220 |
| PspEI | GGTNACC | 1 cut(s) | 125 |
| PspFI | CCCAGC | 1 cut(s) | 1143 |
| PspGI | CCWGG | 2 cut(s) | 709, 1220 |
| PspN4I | GGNNCC | 3 cut(s) | 27, 1149, 1219 |
| PspPI | GGNCC | 6 cut(s) | 625, 713, 1055, 1218, 1268, 1296 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 529, 561 |
| PstI | CTGCAG | 1 cut(s) | 961 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1143 |
| PsuI | RGATCY | 1 cut(s) | 283 |
| RsaI | GTAC | 2 cut(s) | 866, 1226 |
| RsaNI | GTAC | 2 cut(s) | 865, 1225 |
| RseI | CAYNNNNRTG | 1 cut(s) | 570 |
| SaqAI | TTAA | 2 cut(s) | 459, 831 |
| SatI | GCNGC | 6 cut(s) | 42, 321, 612, 777, 795, 957 |
| Sau3AI | GATC | 5 cut(s) | 172, 229, 283, 751, 1190 |
| Sau96I | GGNCC | 6 cut(s) | 625, 713, 1055, 1218, 1268, 1296 |
| ScaI | AGTACT | 1 cut(s) | 866 |
| SchI | GAGTC | 1 cut(s) | 503 |
| ScrFI | CCNGG | 2 cut(s) | 711, 1222 |
| SduI | GDGCHC | 2 cut(s) | 1150, 1289 |
| SfaNI | GCATC | 1 cut(s) | 519 |
| SfcI | CTRYAG | 2 cut(s) | 957, 1254 |
| SinI | GGWCC | 2 cut(s) | 713, 1055 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 570 |
| Sse9I | AATT | 7 cut(s) | 313, 342, 586, 833, 1074, 1171, 1290 |
| SsiI | CCGC | 5 cut(s) | 320, 502, 698, 727, 1328 |
| SspMI | CTAG | 2 cut(s) | 375, 1121 |
| StyD4I | CCNGG | 2 cut(s) | 709, 1220 |
| TaaI | ACNGT | 4 cut(s) | 401, 601, 724, 1139 |
| TaiI | ACGT | 2 cut(s) | 680, 745 |
| TaqI | TCGA | 3 cut(s) | 407, 435, 1189 |
| TasI | AATT | 7 cut(s) | 313, 342, 586, 833, 1074, 1171, 1290 |
| TatI | WGTACW | 1 cut(s) | 864 |
| TauI | GCSGC | 1 cut(s) | 323 |
| TfiI | GAWTC | 1 cut(s) | 263 |
| Tru1I | TTAA | 2 cut(s) | 459, 831 |
| Tru9I | TTAA | 2 cut(s) | 459, 831 |
| TscAI | CASTG | 1 cut(s) | 736 |
| TseI | GCWGC | 5 cut(s) | 41, 611, 776, 794, 956 |
| TspDTI | ATGAA | 8 cut(s) | 153, 315, 356, 567, 609, 1019, 1118, 1331 |
| TspGWI | ACGGA | 1 cut(s) | 80 |
| TspRI | CASTG | 1 cut(s) | 736 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 710 |
| VpaK11BI | GGWCC | 2 cut(s) | 713, 1055 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1225, 1243 |
| XapI | RAATTY | 3 cut(s) | 313, 833, 1074 |
| XbaI | TCTAGA | 1 cut(s) | 1120 |
| XceI | RCATGY | 1 cut(s) | 803 |
| XspI | CTAG | 2 cut(s) | 375, 1121 |
| ZrmI | AGTACT | 1 cut(s) | 866 |
| Zsp2I | ATGCAT | 1 cut(s) | 239 |