pycom08g17290

belongs to the flavoprotein pyridine nucleotide cytochrome reductase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
17440946 .. 17444607
3662 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g17290.5

Sequence Viewer

Length: 1350 bp
ATGTTGGCCACTTATGGAGATGGGGAGCCAACTGATAATGCAGCAAGATTTTACAAATGGTTTACGGAGGGAAAAGATAGGGGTAGCTGGCTTCAACATCTAAAATATGGTGTTTTTGGTCTGGGTAACCGACAATATGAACATTTCAATAAGATAGGAAAAGTGGTTGATGATCAACTTAGTGAAGAAGGTGCAAAGCGTCTTGTTCCCGTTGGCTTAGGTGATGATGATCAATGCATTGAGGACGATTTTTCTGCTTGGGAATCATTGTGGCCTGAGTTAGATCTATTCCTCCGAGATGAAGATGATACAAATTCTGCGGCTACTCCATATACAGCCGTAATTCCAGAATATAGAGTTGTTATTCATGACCCTAGTGTTGTTACCTCTTATGAGGACAGTCAGTCGAATATGGCTAATGGGAATGCGTCTCTCGATATTCACCATCCTTGCAGAGTTAATGTTGCTGTTCAAAGAGAGCTTCACAAACCTGAGTCTGACCGCTCTTGCATCCATCTGGAGTTTGATATCTCTGGAACTGGTATTACATATGAAACTGGAGACCATGTGGGTGTTTATGCAGATAATTGTGATGAAACAGTTGAAGAAGCTGCAAGGTTGTTGGGCCAACCTTTAGATTTACTATTCTCCATACATACTGATAATGATGATGGCACGTCTCTTGGAAGCTCATTACCGCCTCCATTTCCTGGTCCATGCACAGTCCGCACTGCATTGGCACGTTATGCTGATCTATTGAACCCACCTCGGAAGGCTGCCCTACTTGCTTTGGCTGCACATGCCGTTGAACCGAGTGAAGCAGAAAGACTTAAATTTTTATCATCACCTCAGGGGAAGGATGAGTACTCAAAATGGATTGTTGGAAGCCAGAGAAGTCTTGTTGAGGTAATGGCTGAGTTCCCATCAGCGAAGCCTCCACTTGGTGTGTTTTTTGCTGCAGTAGCCCCTCGCTTACAGCCTCGTTACTATTCCATATCATCTTCACCAAGATTTGCACCCCATCGTGTTCATGTAACCTGTGCTTTAGTTTATGGTCCAACGCCAACTGGCAGAATTCACAAAGGAGTGTGTTCGTTCTGGATGAAGAATGCAGTTCCTCTAGAGAAAAGCCATAACAGTAGCTGGGCTCCTATTTTTATTAGGCAATCCAATTTCAAGCTACCTGCTCGATCCTTCAGTCCCTATTATCATGGTGGGGCCTGGTACAGGCTTCGCACCTTTCCGAGGATTTCTACAGGAAAGGATGGCCCTGAAAAGGGAGGGTGCTCAATTAGGGCCTGCACTTCTCTTCTTTGGTTGCAGAAACCGCAGAATGGATTTCATTTATGA

Protein Analysis

450

Amino Acids

49.91

Weight (kDa)

5.9

Isoelectric Point (pI)

42.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1192
AccB7I CCANNNNNTGG 1 cut(s) 710
AccBSI CCGCTC 1 cut(s) 504
AciI CCGC 5 cut(s) 320, 502, 698, 727, 1328
AclWI GGATC 1 cut(s) 1185
AcoI YGGCCR 1 cut(s) 6
AcsI RAATTY 3 cut(s) 313, 833, 1074
AcuI CTGAAG 1 cut(s) 1180
AdeI CACNNNGTG 1 cut(s) 944
AfaI GTAC 2 cut(s) 866, 1226
AfiI CCNNNNNNNGG 7 cut(s) 710, 941, 1227, 1245, 1276, 1277, 1334
AgsI TTSAA 7 cut(s) 95, 148, 473, 605, 760, 809, 1177
AhdI GACNNNNNGTC 1 cut(s) 403
AjiI CACGTC 1 cut(s) 678
AjnI CCWGG 2 cut(s) 709, 1220
AluBI AGCT 6 cut(s) 87, 481, 611, 690, 1143, 1180
AluI AGCT 6 cut(s) 87, 481, 611, 690, 1143, 1180
Alw21I GWGCWC 1 cut(s) 1289
Alw26I GTCTC 3 cut(s) 435, 555, 684
AlwI GGATC 1 cut(s) 1185
AlwNI CAGNNNCTG 1 cut(s) 1143
AoxI GGCC 6 cut(s) 6, 272, 625, 1218, 1267, 1296
ApeKI GCWGC 5 cut(s) 41, 611, 776, 794, 956
ApoI RAATTY 3 cut(s) 313, 833, 1074
AspS9I GGNCC 6 cut(s) 625, 713, 1055, 1218, 1268, 1296
AsuHPI GGTGA 4 cut(s) 233, 434, 837, 996
AvaII GGWCC 2 cut(s) 713, 1055
AxyI CCTNAGG 1 cut(s) 849
BalI TGGCCA 1 cut(s) 8
BanII GRGCYC 1 cut(s) 1150
BarI GAAGNNNNNNTAC 2 cut(s) 848, 880
Bbv12I GWGCWC 1 cut(s) 1289
BbvI GCAGC 5 cut(s) 53, 598, 763, 781, 943
BccI CCATC 7 cut(s) 14, 453, 522, 665, 931, 1029, 1259
BceAI ACGGC 2 cut(s) 323, 788
BcgI CGANNNNNNTGC 2 cut(s) 236, 270
BciT130I CCWGG 2 cut(s) 711, 1222
BclI TGATCA 2 cut(s) 172, 229
BcoDI GTCTC 3 cut(s) 435, 555, 684
BfaI CTAG 2 cut(s) 375, 1121
BfmI CTRYAG 2 cut(s) 957, 1254
BfuAI ACCTGC 1 cut(s) 1192
BglII AGATCT 1 cut(s) 283
BisI GCNGC 6 cut(s) 42, 321, 612, 777, 795, 957
BlsI GCNGC 6 cut(s) 43, 322, 613, 778, 796, 958
BmcAI AGTACT 1 cut(s) 866
Bme1390I CCNGG 2 cut(s) 711, 1222
Bme18I GGWCC 2 cut(s) 713, 1055
BmeRI GACNNNNNGTC 1 cut(s) 403
BmgBI CACGTC 1 cut(s) 678
BmgT120I GGNCC 6 cut(s) 625, 713, 1055, 1218, 1268, 1296
BmiI GGNNCC 3 cut(s) 27, 1149, 1219
BmrFI CCNGG 2 cut(s) 711, 1222
BmsI GCATC 1 cut(s) 519
BpmI CTGGAG 2 cut(s) 539, 579
Bpu10I CCTNAGC 1 cut(s) 217
BsaBI GATNNNNATC 1 cut(s) 228
BsaI GGTCTC 1 cut(s) 555
BsaJI CCNNGG 2 cut(s) 767, 1244
BsaXI ACNNNNNCTCC 2 cut(s) 552, 582
Bsc4I CCNNNNNNNGG 7 cut(s) 710, 941, 1227, 1245, 1276, 1277, 1334
Bse1I ACTGG 3 cut(s) 544, 562, 1072
Bse21I CCTNAGG 1 cut(s) 849
Bse8I GATNNNNATC 1 cut(s) 228
BseBI CCWGG 2 cut(s) 711, 1222
BseDI CCNNGG 2 cut(s) 767, 1244
BseGI GGATG 5 cut(s) 445, 510, 865, 1107, 1270
BseJI GATNNNNATC 1 cut(s) 228
BseLI CCNNNNNNNGG 7 cut(s) 710, 941, 1227, 1245, 1276, 1277, 1334
BseMII CTCAG 4 cut(s) 267, 483, 863, 906
BseNI ACTGG 3 cut(s) 544, 562, 1072
BseXI GCAGC 5 cut(s) 53, 598, 763, 781, 943
BseYI CCCAGC 1 cut(s) 1143
BsgI GTGCAG 2 cut(s) 780, 1285
BshFI GGCC 6 cut(s) 8, 274, 627, 1220, 1269, 1298
BsiHKAI GWGCWC 1 cut(s) 1289
BslFI GGGAC 1 cut(s) 1185
BslI CCNNNNNNNGG 7 cut(s) 710, 941, 1227, 1245, 1276, 1277, 1334
BsmAI GTCTC 3 cut(s) 435, 555, 684
BsmBI CGTCTC 2 cut(s) 435, 684
BsmFI GGGAC 1 cut(s) 1185
BsmI GAATGC 2 cut(s) 430, 1114
BsnI GGCC 6 cut(s) 8, 274, 627, 1220, 1269, 1298
Bso31I GGTCTC 1 cut(s) 555
Bsp1286I GDGCHC 2 cut(s) 1150, 1289
Bsp143I GATC 5 cut(s) 172, 229, 283, 751, 1190
BspACI CCGC 5 cut(s) 320, 502, 698, 727, 1328
BspANI GGCC 6 cut(s) 8, 274, 627, 1220, 1269, 1298
BspCNI CTCAG 4 cut(s) 268, 484, 862, 907
BspHI TCATGA 1 cut(s) 367
BspLI GGNNCC 3 cut(s) 27, 1149, 1219
BspMAI CTGCAG 1 cut(s) 961
BspMI ACCTGC 1 cut(s) 1192
BspPI GGATC 1 cut(s) 1185
BspTNI GGTCTC 1 cut(s) 555
BsrBI CCGCTC 1 cut(s) 504
BsrI ACTGG 3 cut(s) 544, 562, 1072
BssECI CCNNGG 2 cut(s) 767, 1244
BssMI GATC 5 cut(s) 172, 229, 283, 751, 1190
Bst2UI CCWGG 2 cut(s) 711, 1222
Bst4CI ACNGT 4 cut(s) 401, 601, 724, 1139
Bst6I CTCTTC 1 cut(s) 1314
BstAPI GCANNNNNTGC 1 cut(s) 746
BstC8I GCNNGC 2 cut(s) 89, 1300
BstDEI CTNAG 6 cut(s) 179, 217, 276, 492, 849, 915
BstEII GGTNACC 1 cut(s) 125
BstENI CCTNNNNNAGG 2 cut(s) 1225, 1243
BstF5I GGATG 5 cut(s) 445, 510, 865, 1107, 1270
BstKTI GATC 5 cut(s) 175, 232, 286, 754, 1193
BstMAI GTCTC 3 cut(s) 435, 555, 684
BstMBI GATC 5 cut(s) 172, 229, 283, 751, 1190
BstMWI GCNNNNNNNGC 7 cut(s) 726, 746, 785, 794, 800, 962, 1327
BstNI CCWGG 2 cut(s) 711, 1222
BstNSI RCATGY 1 cut(s) 803
BstPI GGTNACC 1 cut(s) 125
BstSCI CCNGG 2 cut(s) 709, 1220
BstSFI CTRYAG 2 cut(s) 957, 1254
BstV1I GCAGC 5 cut(s) 53, 598, 763, 781, 943
BstX2I RGATCY 1 cut(s) 283
BstYI RGATCY 1 cut(s) 283
Bsu36I CCTNAGG 1 cut(s) 849
BsuRI GGCC 6 cut(s) 8, 274, 627, 1220, 1269, 1298
BtrI CACGTC 1 cut(s) 678
BtsCI GGATG 5 cut(s) 445, 510, 865, 1107, 1270
BtsI GCAGTG 1 cut(s) 729
BtsIMutI CAGTG 1 cut(s) 729
BveI ACCTGC 1 cut(s) 1192
Cac8I GCNNGC 2 cut(s) 89, 1300
CaiI CAGNNNCTG 1 cut(s) 1143
CciI TCATGA 1 cut(s) 367
Cfr13I GGNCC 6 cut(s) 625, 713, 1055, 1218, 1268, 1296
CseI GACGC 2 cut(s) 188, 417
Csp6I GTAC 2 cut(s) 865, 1225
CviAII CATG 6 cut(s) 368, 566, 717, 800, 1031, 1211
CviQI GTAC 2 cut(s) 865, 1225
DdeI CTNAG 6 cut(s) 179, 217, 276, 492, 849, 915
DpnI GATC 5 cut(s) 174, 231, 285, 753, 1192
DpnII GATC 5 cut(s) 172, 229, 283, 751, 1190
DraIII CACNNNGTG 1 cut(s) 944
DriI GACNNNNNGTC 1 cut(s) 403
EaeI YGGCCR 1 cut(s) 6
Eam1104I CTCTTC 1 cut(s) 1314
Eam1105I GACNNNNNGTC 1 cut(s) 403
EarI CTCTTC 1 cut(s) 1314
Eco24I GRGCYC 1 cut(s) 1150
Eco31I GGTCTC 1 cut(s) 555
Eco32I GATATC 1 cut(s) 529
Eco47I GGWCC 2 cut(s) 713, 1055
Eco57I CTGAAG 1 cut(s) 1180
Eco81I CCTNAGG 1 cut(s) 849
Eco91I GGTNACC 1 cut(s) 125
EcoNI CCTNNNNNAGG 2 cut(s) 1225, 1243
EcoO109I RGGNCCY 2 cut(s) 1218, 1296
EcoO65I GGTNACC 1 cut(s) 125
EcoRI GAATTC 1 cut(s) 1074
EcoRII CCWGG 2 cut(s) 709, 1220
EcoRV GATATC 1 cut(s) 529
EcoT22I ATGCAT 1 cut(s) 239
EcoT38I GRGCYC 1 cut(s) 1150
Esp3I CGTCTC 2 cut(s) 435, 684
FaeI CATG 6 cut(s) 371, 569, 720, 803, 1034, 1214
FaqI GGGAC 1 cut(s) 1185
FatI CATG 6 cut(s) 367, 565, 716, 799, 1030, 1210
FauNDI CATATG 1 cut(s) 550
FbaI TGATCA 2 cut(s) 172, 229
Fnu4HI GCNGC 6 cut(s) 42, 321, 612, 777, 795, 957
FokI GGATG 5 cut(s) 432, 497, 872, 1114, 1277
FriOI GRGCYC 1 cut(s) 1150
Fsp4HI GCNGC 6 cut(s) 42, 321, 612, 777, 795, 957
FspBI CTAG 2 cut(s) 375, 1121
GluI GCNGC 6 cut(s) 42, 321, 612, 777, 795, 957
GsaI CCCAGC 1 cut(s) 1147
GsuI CTGGAG 2 cut(s) 539, 579
HaeIII GGCC 6 cut(s) 8, 274, 627, 1220, 1269, 1298
HgaI GACGC 2 cut(s) 188, 417
Hin1II CATG 6 cut(s) 371, 569, 720, 803, 1034, 1214
HinfI GANTC 2 cut(s) 263, 494
HphI GGTGA 4 cut(s) 233, 434, 837, 996
Hpy166II GTNNAC 1 cut(s) 63
Hpy188I TCNGA 4 cut(s) 296, 499, 771, 1245
Hpy188III TCNNGA 7 cut(s) 347, 368, 434, 518, 534, 1099, 1121
Hpy8I GTNNAC 1 cut(s) 63
HpyAV CCTTC 4 cut(s) 182, 766, 850, 1204
HpyCH4III ACNGT 4 cut(s) 401, 601, 724, 1139
HpyCH4IV ACGT 2 cut(s) 677, 742
HpyF10VI GCNNNNNNNGC 7 cut(s) 726, 746, 785, 794, 800, 962, 1327
HpyF3I CTNAG 6 cut(s) 179, 217, 276, 492, 849, 915
HpySE526I ACGT 2 cut(s) 677, 742
Hsp92II CATG 6 cut(s) 371, 569, 720, 803, 1034, 1214
Ksp22I TGATCA 2 cut(s) 172, 229
Kzo9I GATC 5 cut(s) 172, 229, 283, 751, 1190
LmnI GCTCC 2 cut(s) 25, 1153
Lsp1109I GCAGC 5 cut(s) 53, 598, 763, 781, 943
LweI GCATC 1 cut(s) 519
MaeI CTAG 2 cut(s) 375, 1121
MaeII ACGT 2 cut(s) 677, 742
MaeIII GTNAC 4 cut(s) 125, 382, 983, 1033
MalI GATC 5 cut(s) 174, 231, 285, 753, 1192
MbiI CCGCTC 1 cut(s) 504
MboI GATC 5 cut(s) 172, 229, 283, 751, 1190
MboII GAAGA 6 cut(s) 197, 314, 617, 993, 1117, 1301
MflI RGATCY 1 cut(s) 283
MhlI GDGCHC 2 cut(s) 1150, 1289
MlsI TGGCCA 1 cut(s) 8
MluCI AATT 7 cut(s) 313, 342, 586, 833, 1074, 1171, 1290
MluNI TGGCCA 1 cut(s) 8
MlyI GAGTC 1 cut(s) 503
MmeI TCCRAC 2 cut(s) 862, 1082
Mox20I TGGCCA 1 cut(s) 8
Mph1103I ATGCAT 1 cut(s) 239
MscI TGGCCA 1 cut(s) 8
MseI TTAA 2 cut(s) 459, 831
MslI CAYNNNNRTG 1 cut(s) 570
Msp20I TGGCCA 1 cut(s) 8
MspR9I CCNGG 2 cut(s) 711, 1222
Mva1269I GAATGC 2 cut(s) 430, 1114
MvaI CCWGG 2 cut(s) 711, 1222
MwoI GCNNNNNNNGC 7 cut(s) 726, 746, 785, 794, 800, 962, 1327
NdeI CATATG 1 cut(s) 550
NdeII GATC 5 cut(s) 172, 229, 283, 751, 1190
NlaIII CATG 6 cut(s) 371, 569, 720, 803, 1034, 1214
NlaIV GGNNCC 3 cut(s) 27, 1149, 1219
NsiI ATGCAT 1 cut(s) 239
NspI RCATGY 1 cut(s) 803
PagI TCATGA 1 cut(s) 367
PctI GAATGC 2 cut(s) 430, 1114
PfeI GAWTC 1 cut(s) 263
PflMI CCANNNNNTGG 1 cut(s) 710
PkrI GCNGC 6 cut(s) 43, 322, 613, 778, 796, 958
PleI GAGTC 1 cut(s) 502
PpsI GAGTC 1 cut(s) 502
Psp6I CCWGG 2 cut(s) 709, 1220
PspEI GGTNACC 1 cut(s) 125
PspFI CCCAGC 1 cut(s) 1143
PspGI CCWGG 2 cut(s) 709, 1220
PspN4I GGNNCC 3 cut(s) 27, 1149, 1219
PspPI GGNCC 6 cut(s) 625, 713, 1055, 1218, 1268, 1296
PsrI GAACNNNNNNTAC 2 cut(s) 529, 561
PstI CTGCAG 1 cut(s) 961
PstNI CAGNNNCTG 1 cut(s) 1143
PsuI RGATCY 1 cut(s) 283
RsaI GTAC 2 cut(s) 866, 1226
RsaNI GTAC 2 cut(s) 865, 1225
RseI CAYNNNNRTG 1 cut(s) 570
SaqAI TTAA 2 cut(s) 459, 831
SatI GCNGC 6 cut(s) 42, 321, 612, 777, 795, 957
Sau3AI GATC 5 cut(s) 172, 229, 283, 751, 1190
Sau96I GGNCC 6 cut(s) 625, 713, 1055, 1218, 1268, 1296
ScaI AGTACT 1 cut(s) 866
SchI GAGTC 1 cut(s) 503
ScrFI CCNGG 2 cut(s) 711, 1222
SduI GDGCHC 2 cut(s) 1150, 1289
SfaNI GCATC 1 cut(s) 519
SfcI CTRYAG 2 cut(s) 957, 1254
SinI GGWCC 2 cut(s) 713, 1055
SmiMI CAYNNNNRTG 1 cut(s) 570
Sse9I AATT 7 cut(s) 313, 342, 586, 833, 1074, 1171, 1290
SsiI CCGC 5 cut(s) 320, 502, 698, 727, 1328
SspMI CTAG 2 cut(s) 375, 1121
StyD4I CCNGG 2 cut(s) 709, 1220
TaaI ACNGT 4 cut(s) 401, 601, 724, 1139
TaiI ACGT 2 cut(s) 680, 745
TaqI TCGA 3 cut(s) 407, 435, 1189
TasI AATT 7 cut(s) 313, 342, 586, 833, 1074, 1171, 1290
TatI WGTACW 1 cut(s) 864
TauI GCSGC 1 cut(s) 323
TfiI GAWTC 1 cut(s) 263
Tru1I TTAA 2 cut(s) 459, 831
Tru9I TTAA 2 cut(s) 459, 831
TscAI CASTG 1 cut(s) 736
TseI GCWGC 5 cut(s) 41, 611, 776, 794, 956
TspDTI ATGAA 8 cut(s) 153, 315, 356, 567, 609, 1019, 1118, 1331
TspGWI ACGGA 1 cut(s) 80
TspRI CASTG 1 cut(s) 736
Van91I CCANNNNNTGG 1 cut(s) 710
VpaK11BI GGWCC 2 cut(s) 713, 1055
XagI CCTNNNNNAGG 2 cut(s) 1225, 1243
XapI RAATTY 3 cut(s) 313, 833, 1074
XbaI TCTAGA 1 cut(s) 1120
XceI RCATGY 1 cut(s) 803
XspI CTAG 2 cut(s) 375, 1121
ZrmI AGTACT 1 cut(s) 866
Zsp2I ATGCAT 1 cut(s) 239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.